Alcp2_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Alcp2_m (alcohol preference locus 2 (mouse)) Mus musculus

Symbol: Alcp2_m
Name: alcohol preference locus 2 (mouse)
RGD ID: 1301078
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm391172,209,796 - 84,731,462MOUSEQTLGRCm39
GRCm381172,318,970 - 84,840,636MOUSEQTLGRCm38
MGSCv371172,132,472 - 84,654,138 (+)MOUSEQTLGRCm37
MGSCv31153,890,236 - 89,890,236RGD
cM Map1144.0MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Alcp2_mMousebehavior/neurological phenotype  IEA 704405Created by mouse qtl pipelineMGIPMID:8640219
Alcp2_mMouseincreased alcohol consumption  IAGP 5509061 MGIPMID:8640219

#
Reference Title
Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
PMID:8640219  



1 to 20 of 709 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1621231Fbxo39F-box protein 39117220527072210245Mouse
15018893Gm51867predicted gene, 51867117223049672236416Mouse
732610Tekt1tektin 1117223554372253268Mouse
9629636Gm34317predicted gene, 34317117225275472261681Mouse
9650661Mir6338microRNA 6338117227958272279690Mouse
1323518Smtnl2smoothelin-like 2117227998972302539Mouse
401715217LOC131379041STARR-seq mESC enhancer starr_29906117231056372312161Mouse
401837988LOC132441917STARR-positive B cell enhancer ABC_E10683117232031772320617Mouse
1551934Ggt6gamma-glutamyltransferase 6117232606772329392Mouse
401840331LOC132441918STARR-positive B cell enhancer ABC_E8422117233199172332292Mouse
62354Mybbp1aMYB binding protein (P160) 1a117233215372342596Mouse
1615706Spns2SPNS lysolipid transporter 2, sphingosine-1-phosphate117234246472380797Mouse
10028734Spns2osSpns2 opposite strand117234819672352643Mouse
1315769Spns3SPNS lysolipid transporter 3, sphingosine-1-phosphate (putative)117238897972441334Mouse
15019108Gm51906predicted gene, 51906117245463372497849Mouse
401711289LOC131379042STARR-seq mESC enhancer starr_29912117246048572461484Mouse
401840598LOC132441919STARR-positive B cell enhancer ABC_E8423117246144872461749Mouse
2295583Gm12712predicted gene 12712117246330772464194Mouse
401710710LOC131379043STARR-seq mESC enhancer starr_29914117246664372469146Mouse
401841425LOC132441920STARR-positive B cell enhancer ABC_E2360117249783172498132Mouse

1 to 20 of 709 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match

1 to 10 of 79 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
27226783Tibl5_mtibia length 5, 5 week (mouse)1168190826101890826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166733420100733652Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
4141365Ltxs3_mlethal factor toxin susceptibility 3 (mouse)Not determined117757387380746358Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170691198104691366Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5528498572209927Mouse
1300766Skull16_mskull morphology 16 (mouse)Not determined1181574481115574636Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172019649106019734Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse

1 to 10 of 79 rows


Database
Acc Id
Source(s)
MGD MGI:107452

Note Type Note Reference