Ccl7 (chemokine (C-C motif) ligand 7) - Rat Genome Database

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Gene: Ccl7 (chemokine (C-C motif) ligand 7) Mus musculus
Analyze
Symbol: Ccl7
Name: chemokine (C-C motif) ligand 7
RGD ID: 1551007
MGI Page MGI
Description: Exhibits CCR2 chemokine receptor binding activity. Predicted to be involved in several processes, including cellular response to cytokine stimulus; leukocyte chemotaxis; and positive regulation of ERK1 and ERK2 cascade. Localizes to extracellular space. Is expressed in several structures, including central nervous system; leg; lung; retina; and vertebral axis musculature. Human ortholog(s) of this gene implicated in multiple sclerosis. Orthologous to human CCL7 (C-C motif chemokine ligand 7); INTERACTS WITH 1,2-dimethylhydrazine; 1-chloro-2,4-dinitrobenzene; 15-acetyldeoxynivalenol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: C-C motif chemokine 7; fi; fic; intercrine/chemokine MARC; ma; marc; mcp; MCP-; MCP-3; mcp3; monocyte chemoattractant protein 3; monocyte chemotactic protein 3; RANTES/sis homolog; Scy; Scya7; small inducible cytokine A7; small-inducible cytokine A7
RGD Orthologs
Human
Rat
Dog
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391181,936,538 - 81,938,351 (+)NCBIGRCm39mm39
GRCm39 Ensembl1181,936,538 - 81,938,351 (+)Ensembl
GRCm381182,045,712 - 82,047,525 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1182,045,712 - 82,047,525 (+)EnsemblGRCm38mm10GRCm38
MGSCv371181,859,214 - 81,861,027 (+)NCBIGRCm37mm9NCBIm37
MGSCv361181,861,909 - 81,863,720 (+)NCBImm8
Celera1191,659,161 - 91,660,974 (+)NCBICelera
Cytogenetic Map11CNCBI
cM Map1149.83NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
1,4-phenylenediamine  (ISO)
1-chloro-2,4-dinitrobenzene  (EXP,ISO)
15-acetyldeoxynivalenol  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-trinitrobenzenesulfonic acid  (EXP)
2,4-dinitrobenzenesulfonic acid  (EXP)
2-acetamidofluorene  (ISO)
2-amino-2-deoxy-D-glucopyranose  (ISO)
3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine  (ISO)
3-acetyldeoxynivalenol  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
3-methylcholanthrene  (EXP)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (EXP,ISO)
4-hydroxynon-2-enal  (EXP)
4-hydroxyphenyl retinamide  (EXP)
4-nitroquinoline N-oxide  (EXP)
acetamide  (ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucosamine  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
amphibole asbestos  (ISO)
apocynin  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
asperentin  (EXP)
astemizole  (ISO)
atrazine  (ISO)
barium sulfate  (ISO)
benzalkonium chloride  (EXP)
benzo[a]pyrene  (EXP,ISO)
beta-D-glucosamine  (ISO)
bis(2-chloroethyl) sulfide  (EXP,ISO)
bisphenol A  (EXP,ISO)
bleomycin A2  (EXP)
bromobenzene  (ISO)
butanal  (ISO)
C60 fullerene  (ISO)
Calcimycin  (EXP)
calcium atom  (ISO)
calcium(0)  (ISO)
cannabidiol  (EXP)
carbofuran  (ISO)
carbon nanotube  (EXP,ISO)
ceric oxide  (ISO)
chenodeoxycholic acid  (EXP)
cholesterol  (EXP)
choline  (EXP)
cisplatin  (ISO)
cobalt atom  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
cyclophosphamide  (EXP)
cyclosporin A  (EXP)
cypermethrin  (EXP)
deoxycholic acid  (EXP)
deoxynivalenol  (EXP)
dexamethasone  (EXP)
dextran sulfate  (EXP)
diarsenic trioxide  (ISO)
dichlorine  (EXP)
dichromium trioxide  (ISO)
diethyl malate  (EXP)
diethylstilbestrol  (ISO)
dioxygen  (EXP)
doxorubicin  (ISO)
endosulfan  (ISO)
ethanol  (EXP)
fenvalerate  (ISO)
ferric oxide  (ISO)
flumequine  (EXP)
fluoranthene  (EXP)
folic acid  (EXP)
furan  (ISO)
Fusarenone X  (EXP)
gadodiamide hydrate  (ISO)
gentamycin  (ISO)
gold atom  (EXP)
gold(0)  (EXP)
graphene oxide  (EXP)
GW 4064  (EXP)
isoprenaline  (ISO)
L-methionine  (EXP)
lipopolysaccharide  (EXP,ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
MeIQx  (EXP)
mercury atom  (EXP)
mercury(0)  (EXP)
metacetamol  (EXP)
metformin  (EXP)
methylmercury chloride  (EXP,ISO)
mycophenolic acid  (EXP)
mycotoxin  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodimethylamine  (ISO)
naphthalene  (EXP)
neocuproine  (EXP)
neoechinulin A  (EXP)
nickel atom  (EXP,ISO)
nickel dichloride  (ISO)
nickel sulfate  (EXP)
oxaliplatin  (ISO)
ozone  (EXP)
paracetamol  (EXP)
pentanal  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
pioglitazone  (EXP)
piperidines  (ISO)
polymyxin B2  (EXP)
potassium dichromate  (EXP)
procyanidin B3  (EXP)
propanal  (ISO)
quartz  (ISO)
resveratrol  (EXP)
SB 203580  (EXP)
Shikonin  (EXP)
silicon dioxide  (EXP,ISO)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenite  (EXP,ISO)
succimer  (EXP)
tacrolimus hydrate  (EXP)
tamoxifen  (EXP)
taurocholic acid  (EXP)
testosterone  (EXP,ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP,ISO)
toluene 2,4-diisocyanate  (EXP)
topotecan  (ISO)
tributylstannane  (ISO)
trimellitic anhydride  (ISO)
troglitazone  (ISO)
valproic acid  (ISO)
XL147  (EXP)
zinc atom  (EXP)
zinc(0)  (EXP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
1. Abu El-Asrar AM, etal., Br J Ophthalmol. 2000 Dec;84(12):1360-6.
2. Adarichev VA, etal., Autoimmunity. 2006 Dec;39(8):663-73.
3. Batra J, etal., J Allergy Clin Immunol. 2011 Mar 8.
4. Brady KP, etal., Genome Res 1997 Nov;7(11):1085-93.
5. Bry K, etal., Am J Respir Cell Mol Biol. 2007 Jan;36(1):32-42. Epub 2006 Aug 3.
6. Choi ES, etal., Am J Respir Crit Care Med. 2004 Sep 1;170(5):508-15. Epub 2004 Jun 10.
7. Dezerega A, etal., Int Endod J. 2010 Oct;43(10):902-8. doi: 10.1111/j.1365-2591.2010.01764.x. Epub 2010 Jul 15.
8. Dezerega A, etal., J Periodontol. 2010 Feb;81(2):267-76.
9. Dharajiya N, etal., PLoS One. 2009 Dec 21;4(12):e8172.
10. Frankenberger M, etal., Mol Med. 2011;17(7-8):762-70. doi: 10.2119/molmed.2010.00202. Epub 2011 Feb 9.
11. Gu N, etal., Am J Physiol Lung Cell Mol Physiol. 2010 Mar;298(3):L290-6. Epub 2009 Dec 4.
12. Huber J, etal., J Clin Endocrinol Metab. 2008 Aug;93(8):3215-21. Epub 2008 May 20.
13. Langley RJ, etal., J Toxicol Environ Health A. 2011;74(19):1261-79.
14. Luesink M, etal., Blood. 2009 Dec 24;114(27):5512-21. Epub 2009 Oct 14.
15. McManus C, etal., J Neuroimmunol. 1998 Jun 1;86(1):20-9.
16. MGD data from the GO Consortium
17. Morgan DL, etal., Toxicol Pathol. 2012 Apr;40(3):448-65. Epub 2012 Jan 3.
18. Nelissen I, etal., J Neurol Sci. 2002 Aug 15;200(1-2):43-8.
19. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
20. Ou ZL, etal., Am J Kidney Dis. 2001 Feb;37(2):411-7.
21. Ou ZL, etal., Nephron. 2000 Jul;85(3):254-7.
22. Pucheu-Haston CM, etal., Toxicol Appl Pharmacol. 2010 Apr 15;244(2):144-55. Epub 2010 Jan 4.
23. RGD automated import pipeline
24. RGD automated import pipeline for gene-chemical interactions
25. Saha JK, etal., Eur J Pharmacol. 2007 Dec 1;575(1-3):158-67. Epub 2007 Aug 2.
26. Santiago J, etal., Eur Respir J. 2008 Nov;32(5):1243-9. Epub 2008 Jun 25.
27. Smith JB and Herschman HR, J Biol Chem 1995 Jul 14;270(28):16756-65.
28. Steger-Hartmann T, etal., Exp Toxicol Pathol. 2009 Nov;61(6):537-52. Epub 2009 Jan 7.
29. Uguccioni M, etal., Am J Pathol. 1999 Aug;155(2):331-6.
30. Walsh ER, etal., J Exp Med. 2008 Jun 9;205(6):1285-92. Epub 2008 May 19.
31. Westermann D, etal., Circulation. 2011 Nov 8;124(19):2082-93. Epub 2011 Oct 10.
32. Wright ED, etal., J Otolaryngol. 1998 Oct;27(5):281-7.
33. Yang Y, etal., J Allergy Clin Immunol. 2020 Apr 29. pii: S0091-6749(20)30576-5. doi: 10.1016/j.jaci.2020.04.027.
34. Zhang C, etal., Mol Vis. 2005 Oct 27;11:887-95.
35. Zhang RX, etal., J Investig Allergol Clin Immunol. 2007;17(5):329-36.
Additional References at PubMed
PMID:1281219   PMID:7642742   PMID:7989769   PMID:8002978   PMID:8455595   PMID:8662823   PMID:8996246   PMID:9177770   PMID:10349636   PMID:10438970   PMID:10995569   PMID:11042159  
PMID:11076861   PMID:11217851   PMID:11735217   PMID:11777981   PMID:12080938   PMID:12098066   PMID:12477932   PMID:12847692   PMID:14633605   PMID:15214937   PMID:15489334   PMID:16002730  
PMID:16141072   PMID:16141073   PMID:16172501   PMID:16473829   PMID:16602821   PMID:17364026   PMID:18453562   PMID:18453605   PMID:18566428   PMID:18660381   PMID:19006696   PMID:19038247  
PMID:19587014   PMID:19641140   PMID:20107187   PMID:20234092   PMID:20931267   PMID:20970834   PMID:21267068   PMID:21567452   PMID:21677750   PMID:21706136   PMID:21873635   PMID:22006493  
PMID:22960654   PMID:23033370   PMID:23364351   PMID:23375831   PMID:23462015   PMID:23872063   PMID:23972264   PMID:24037091   PMID:25144769   PMID:25495686   PMID:25847975   PMID:26302185  
PMID:26401006   PMID:26682986   PMID:26756352   PMID:27181207   PMID:27956527   PMID:28046055   PMID:28951461   PMID:30671055   PMID:30764543   PMID:31003094   PMID:31246581   PMID:31518371  
PMID:32217106   PMID:32737150   PMID:33257678  


Genomics

Comparative Map Data
Ccl7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391181,936,538 - 81,938,351 (+)NCBIGRCm39mm39
GRCm39 Ensembl1181,936,538 - 81,938,351 (+)Ensembl
GRCm381182,045,712 - 82,047,525 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1182,045,712 - 82,047,525 (+)EnsemblGRCm38mm10GRCm38
MGSCv371181,859,214 - 81,861,027 (+)NCBIGRCm37mm9NCBIm37
MGSCv361181,861,909 - 81,863,720 (+)NCBImm8
Celera1191,659,161 - 91,660,974 (+)NCBICelera
Cytogenetic Map11CNCBI
cM Map1149.83NCBI
CCL7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1734,270,221 - 34,272,242 (+)EnsemblGRCh38hg38GRCh38
GRCh381734,270,221 - 34,272,242 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371732,597,240 - 32,599,261 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361729,621,353 - 29,623,369 (+)NCBINCBI36hg18NCBI36
Build 341729,621,352 - 29,623,368NCBI
Celera1729,507,053 - 29,509,069 (+)NCBI
Cytogenetic Map17q12NCBI
HuRef1728,782,528 - 28,784,554 (+)NCBIHuRef
CHM1_11732,661,096 - 32,663,122 (+)NCBICHM1_1
Ccl7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21067,016,446 - 67,018,296 (+)NCBI
Rnor_6.0 Ensembl1069,423,086 - 69,424,979 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01069,423,083 - 69,424,933 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01069,058,109 - 69,059,959 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41070,267,281 - 70,269,131 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11070,280,903 - 70,282,754 (+)NCBI
Celera1065,963,980 - 65,965,830 (+)NCBICelera
Cytogenetic Map10q26NCBI
CCL7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1938,994,638 - 38,996,103 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl938,993,911 - 39,010,483 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha938,217,925 - 38,219,390 (-)NCBI
ROS_Cfam_1.0939,808,818 - 39,810,283 (-)NCBI
UMICH_Zoey_3.1938,595,171 - 38,596,636 (-)NCBI
UNSW_CanFamBas_1.0938,875,478 - 38,879,658 (-)NCBI
UU_Cfam_GSD_1.0938,963,214 - 38,964,679 (-)NCBI
CCL7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11627,777,795 - 27,780,413 (+)NCBI
Vero_WHO_p1.0NW_0236660752,239,664 - 2,241,876 (-)NCBI

Position Markers
Z12297  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381182,047,179 - 82,047,359UniSTSGRCm38
MGSCv371181,860,681 - 81,860,861UniSTSGRCm37
Celera1191,660,628 - 91,660,808UniSTS
Cytogenetic Map11CUniSTS
cM Map1146.5UniSTS
Whitehead_YAC11 UniSTS
Scya7  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381182,047,092 - 82,047,300UniSTSGRCm38
MGSCv371181,860,594 - 81,860,802UniSTSGRCm37
Celera1191,660,541 - 91,660,749UniSTS
Cytogenetic Map11CUniSTS
cM Map1146.5UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15861720487804412Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5882844085175703Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116179599488808902Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116226517996265327Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116342858194173092Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116493951098939647Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116493951098939647Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116493951098939647Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166842594100842826Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166842594100842826Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66842594100842826Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166842594100842826Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166842594100842826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166842594100842826Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168300000102000000Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170800372104800540Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170800372104800540Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170800372104800540Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170800372104800540Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172128823106128908Mouse
1301078Alcp2_malcohol preference locus 2 (mouse)Not determined117231897084840636Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172835299106835463Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172927789106927907Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172927789106927907Mouse
12903994Opfaq3_mopen field activity QTL 3 (mouse)117384671582178599Mouse
11038695Par8_mpulmonary adenoma resistance 8 (mouse)1177172953111173092Mouse
1301414Heal10_mwound healing/regeneration 10 (mouse)Not determined1177546357111546496Mouse
10045616Heal25_mwound healing/regeneration 25 (mouse)Not determined1177546357111546496Mouse
1302124Eae7_msusceptibility to experimental allergic encephalomyelitis 7 (mouse)Not determined117768304799486994Mouse
10413882Moe1_mmodifier of epilepsy 1 (mouse)1177880152111880273Mouse
1301640Lore4_mloss of righting induced by ethanol 4 (mouse)Not determined1179265183107725646Mouse
14746970Manh71_mmandible shape 71 (mouse)1179525431113525431Mouse
10043865T2dm5sa_mtype 2 diabetes mellitus 5 in SMXA RI mice (mouse)Not determined1179922933104611872Mouse
27226758Femd3_mfemur midshaft diameter 3, 5 week (mouse)1181000000102000000Mouse
1300649Crhq1_mcompensatory renal hypertrophy QTL 1 (mouse)Not determined1181683655115683810Mouse
1300766Skull16_mskull morphology 16 (mouse)Not determined1181683655115683810Mouse
10412288Carg4_mCandida albicans resistance gene 4 (mouse)Not determined1181919441115919441Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:126
Count of miRNA genes:105
Interacting mature miRNAs:121
Transcripts:ENSMUST00000021011
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000021011   ⟹   ENSMUSP00000021011
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1182,045,712 - 82,047,525 (+)Ensembl
RefSeq Acc Id: NM_013654   ⟹   NP_038682
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391181,936,538 - 81,938,351 (+)NCBI
GRCm381182,045,712 - 82,047,525 (+)ENTREZGENE
MGSCv371181,859,214 - 81,861,027 (+)RGD
Celera1191,659,161 - 91,660,974 (+)RGD
cM Map11 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_038682   ⟸   NM_013654
- Peptide Label: precursor
- UniProtKB: Q03366 (UniProtKB/Swiss-Prot),   A9Z1Z1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000021011   ⟸   ENSMUST00000021011

Promoters
RGD ID:6820577
Promoter ID:MM_KWN:8833
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000001664
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361181,859,074 - 81,859,574 (+)MPROMDB
RGD ID:8675824
Promoter ID:EPDNEW_M15942
Type:single initiation site
Name:Ccl7_1
Description:Mus musculus chemokine (C-C motif) ligand 7 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381182,045,714 - 82,045,774EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:99512 AgrOrtholog
Ensembl Genes ENSMUSG00000035373 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000021011 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000021011 ENTREZGENE, UniProtKB/Swiss-Prot
InterPro Chemokine_b/g/d UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Chemokine_CC_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Chemokine_IL8-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Interleukin_8-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:20306 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:99512 ENTREZGENE
NCBI Gene 20306 ENTREZGENE
PANTHER PTHR12015 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam IL8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ccl7 PhenoGen
PROSITE SMALL_CYTOKINES_CC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART SCY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54117 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A9Z1Z1 ENTREZGENE, UniProtKB/TrEMBL
  CCL7_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE