Ggnbp2 (gametogenetin binding protein 2) - Rat Genome Database

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Gene: Ggnbp2 (gametogenetin binding protein 2) Mus musculus
Analyze
Symbol: Ggnbp2
Name: gametogenetin binding protein 2
RGD ID: 1614194
MGI Page MGI
Description: Acts upstream of or within several processes, including labyrinthine layer blood vessel development; negative regulation of cell population proliferation; and negative regulation of peptidyl-tyrosine phosphorylation. Located in cytoplasm and nucleus. Is expressed in several structures, including central nervous system; early conceptus; genitourinary system; retina; and spleen. Orthologous to human GGNBP2 (gametogenetin binding protein 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI451896; C75939; D330017P12Rik; DIF-; DIF-3; dioxin inducible factor 3; dioxin-inducible factor 3; gametogenetin-binding protein 2; gametogenin binding protein 2; Zfp40; Zfp403; zinc finger protein 403
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391184,723,187 - 84,761,668 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1184,723,187 - 84,761,643 (-)EnsemblGRCm39 Ensembl
GRCm381184,832,361 - 84,870,837 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1184,832,361 - 84,870,817 (-)EnsemblGRCm38mm10GRCm38
MGSCv371184,645,863 - 84,684,240 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361184,648,924 - 84,686,933 (-)NCBIMGSCv36mm8
Celera1194,452,264 - 94,490,756 (-)NCBICelera
Cytogenetic Map11CNCBI
cM Map1151.34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ggnbp2Mouseautism spectrum disorder  ISOGGNBP2 (Homo sapiens)8554872ClinVar Annotator: match by term: Autism spectrum disorderClinVarPMID:21844811 more ...
Ggnbp2Mouseautistic disorder  ISOGGNBP2 (Homo sapiens)8554872ClinVar Annotator: match by term: AutismClinVarPMID:21681106 and PMID:30208311
Ggnbp2Mousechromosome 17q12 deletion syndrome  ISOGGNBP2 (Homo sapiens)8554872ClinVar Annotator: match by term: Chromosome 17q12 deletion syndromeClinVarPMID:17924346 more ...
Ggnbp2MouseDevelopmental Disease  ISOGGNBP2 (Homo sapiens)8554872ClinVar Annotator: match by term: Developmental disorderClinVarPMID:25741868
Ggnbp2Mousehyperphosphatasia with impaired intellectual development syndrome 5  ISOGGNBP2 (Homo sapiens)8554872ClinVar Annotator: match by term: GLYCOSYLPHOSPHATIDYLINOSITOL BIOSYNTHESIS DEFECT 11ClinVarPMID:12148114 more ...
Ggnbp2MouseNeurodevelopmental Disorders  ISOGGNBP2 (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868
Ggnbp2Mouseschizophrenia  ISOGGNBP2 (Homo sapiens)8554872ClinVar Annotator: match by term: SchizophreniaClinVarPMID:21681106 and PMID:30208311

1 to 20 of 46 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ggnbp2Mouse1,2-dimethylhydrazine multiple interactionsEXP 6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of GGNBP2 mRNACTDPMID:22206623
Ggnbp2Mouse1,2-dimethylhydrazine decreases expressionEXP 64804641 and 2-Dimethylhydrazine results in decreased expression of GGNBP2 mRNACTDPMID:22206623
Ggnbp2Mouse17alpha-ethynylestradiol increases expressionEXP 6480464Ethinyl Estradiol results in increased expression of GGNBP2 mRNACTDPMID:17942748
Ggnbp2Mouse17alpha-ethynylestradiol multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of GGNBP2 mRNACTDPMID:17942748
Ggnbp2Mouse2,3,7,8-tetrachlorodibenzodioxine multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of GGNBP2 mRNACTDPMID:17942748
Ggnbp2Mouse2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of GGNBP2 mRNACTDPMID:21570461
Ggnbp2Mouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOGgnbp2 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of GGNBP2 mRNACTDPMID:21215274
Ggnbp2Mouse2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of GGNBP2 mRNACTDPMID:11728448 and PMID:19770486
Ggnbp2Mouse2-hydroxypropanoic acid increases expressionISOGGNBP2 (Homo sapiens)6480464Lactic Acid results in increased expression of GGNBP2 mRNACTDPMID:30851411
Ggnbp2Mouse4,4'-sulfonyldiphenol decreases expressionEXP 6480464bisphenol S results in decreased expression of GGNBP2 mRNACTDPMID:39298647
Ggnbp2Mouse4-hydroxyphenyl retinamide increases expressionEXP 6480464Fenretinide results in increased expression of GGNBP2 mRNACTDPMID:28973697
Ggnbp2Mouseaflatoxin B1 increases expressionEXP 6480464Aflatoxin B1 results in increased expression of GGNBP2 mRNACTDPMID:19770486
Ggnbp2Mouseaflatoxin B1 decreases methylationISOGGNBP2 (Homo sapiens)6480464Aflatoxin B1 results in decreased methylation of GGNBP2 geneCTDPMID:27153756
Ggnbp2MouseAflatoxin B2 alpha decreases methylationISOGGNBP2 (Homo sapiens)6480464aflatoxin B2 results in decreased methylation of GGNBP2 intronCTDPMID:30157460
Ggnbp2Mouseatrazine increases expressionISOGGNBP2 (Homo sapiens)6480464Atrazine results in increased expression of GGNBP2 mRNACTDPMID:22378314
Ggnbp2Mousebenzo[a]pyrene increases expressionEXP 6480464Benzo(a)pyrene results in increased expression of GGNBP2 mRNACTDPMID:22228805
Ggnbp2Mousebenzo[a]pyrene diol epoxide I increases expressionISOGGNBP2 (Homo sapiens)64804647 more ...CTDPMID:26238291
Ggnbp2Mousebisphenol A increases expressionISOGgnbp2 (Rattus norvegicus)6480464bisphenol A results in increased expression of GGNBP2 mRNACTDPMID:25181051
Ggnbp2Mousebisphenol A decreases expressionISOGgnbp2 (Rattus norvegicus)6480464bisphenol A results in decreased expression of GGNBP2 mRNACTDPMID:34947998
Ggnbp2Mousecadmium dichloride decreases expressionISOGGNBP2 (Homo sapiens)6480464Cadmium Chloride results in decreased expression of GGNBP2 mRNACTDPMID:38568856

1 to 20 of 46 rows

Biological Process
1 to 11 of 11 rows

  
1 to 11 of 11 rows

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ggnbp2Mousecytoplasm located_inIDA 2290270 PMID:15642376MGIPMID:15642376
Ggnbp2Mousecytoplasm is_active_inIBAPANTHER:PTN001006389 and MGI:23873562290270 GO_CentralGO_REF:0000033
Ggnbp2Mousecytoplasmic vesicle located_inIEAUniProtKB-KW:KW-09682290270 UniProtGO_REF:0000043
Ggnbp2Mousenucleus located_inIDA 2290270 PMID:11728448MGIPMID:11728448
Ggnbp2Mousenucleus is_active_inIBAPANTHER:PTN001006389 and MGI:23873562290270 GO_CentralGO_REF:0000033

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ggnbp2Mouseprotein binding enablesIPIUniProtKB:Q80WJ12290270 PMID:15642376IntActPMID:15642376
Ggnbp2Mouseprotein binding enablesIPIPR:Q80WJ12290270 PMID:15642376MGIPMID:15642376

1 to 20 of 43 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ggnbp2Mouseabnormal acrosome assembly  IAGP 5509061 MGIPMID:28823874
Ggnbp2Mouseabnormal acrosome morphology  IAGP 5509061 MGIPMID:28823874
Ggnbp2Mouseabnormal embryo size  IEA 5509061 MGI 
Ggnbp2Mouseabnormal epididymis morphology  IAGP 5509061 MGIPMID:28823874
Ggnbp2Mouseabnormal manchette assembly  IAGP 5509061 MGIPMID:28823874
Ggnbp2Mouseabnormal placenta junctional zone morphology  IAGP 5509061 MGIPMID:26764350
Ggnbp2Mouseabnormal placenta labyrinth morphology  IAGP 5509061 MGIPMID:26764350
Ggnbp2Mouseabnormal placental labyrinth vasculature morphology  IAGP 5509061 MGIPMID:26764350
Ggnbp2Mouseabnormal seminiferous tubule epithelium morphology  IAGP 5509061 MGIPMID:28592902
Ggnbp2Mouseabnormal seminiferous tubule epithelium morphology  IAGP 5509061 MGIPMID:28823874
Ggnbp2Mouseabnormal seminiferous tubule morphology  IAGP 5509061 MGIPMID:28592902
Ggnbp2Mouseabnormal seminiferous tubule morphology  IAGP 5509061 MGIPMID:28823874
Ggnbp2Mouseabnormal spermatid morphology  IAGP 5509061 MGIPMID:28823874
Ggnbp2Mouseabnormal spermatogenesis  IAGP 5509061 MGIPMID:28592902
Ggnbp2Mouseabnormal testis physiology  IAGP 5509061 MGIPMID:28823874
Ggnbp2Mouseanophthalmia  IEA 5509061 MGI 
Ggnbp2Mousearrest of spermiogenesis  IAGP 5509061 MGIPMID:28823874
Ggnbp2Mouseazoospermia  IAGP 5509061 MGIPMID:28592902
Ggnbp2Mouseazoospermia  IAGP 5509061 MGIPMID:28823874
Ggnbp2Mousedecreased circulating total protein level  IEA 5509061 MGI 
1 to 20 of 43 rows

#
Reference Title
Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:8842733   PMID:8889548   PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11125038   PMID:11217851   PMID:11728448   PMID:12466851   PMID:12477932  
PMID:12520002   PMID:12904583   PMID:14610273   PMID:15489334   PMID:15618518   PMID:15642376   PMID:16141072   PMID:16141073   PMID:18287559   PMID:18799693   PMID:20412781   PMID:21267068  
PMID:21677750   PMID:21873635   PMID:26764350   PMID:27626380   PMID:28592902   PMID:28823874   PMID:30055035   PMID:32325033   PMID:36127399   PMID:36737727   PMID:38355793   PMID:39109527  



Ggnbp2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391184,723,187 - 84,761,668 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1184,723,187 - 84,761,643 (-)EnsemblGRCm39 Ensembl
GRCm381184,832,361 - 84,870,837 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1184,832,361 - 84,870,817 (-)EnsemblGRCm38mm10GRCm38
MGSCv371184,645,863 - 84,684,240 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361184,648,924 - 84,686,933 (-)NCBIMGSCv36mm8
Celera1194,452,264 - 94,490,756 (-)NCBICelera
Cytogenetic Map11CNCBI
cM Map1151.34NCBI
GGNBP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381736,544,919 - 36,589,848 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1736,544,912 - 36,589,848 (+)EnsemblGRCh38hg38GRCh38
GRCh371734,900,768 - 34,946,278 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361731,974,917 - 32,020,391 (+)NCBINCBI36Build 36hg18NCBI36
Celera1731,723,010 - 31,768,554 (+)NCBICelera
Cytogenetic Map17q12NCBI
HuRef1730,837,504 - 30,883,611 (+)NCBIHuRef
CHM1_11734,936,451 - 34,981,411 (+)NCBICHM1_1
T2T-CHM13v2.01737,530,672 - 37,576,192 (+)NCBIT2T-CHM13v2.0
Ggnbp2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81070,208,950 - 70,240,554 (-)NCBIGRCr8
mRatBN7.21069,711,527 - 69,743,134 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1069,711,532 - 69,743,365 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1074,331,528 - 74,362,862 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01073,836,295 - 73,867,629 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01069,300,962 - 69,332,296 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01072,156,729 - 72,188,834 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1072,156,728 - 72,188,308 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01072,063,588 - 72,095,410 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41073,114,838 - 73,146,171 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11073,129,208 - 73,160,541 (-)NCBI
Celera1068,639,481 - 68,670,565 (-)NCBICelera
Cytogenetic Map10q26NCBI
Ggnbp2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554511,345,626 - 1,386,099 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554511,345,720 - 1,386,100 (-)NCBIChiLan1.0ChiLan1.0
GGNBP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21928,170,683 - 28,216,241 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11730,052,553 - 30,098,084 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01720,491,687 - 20,537,516 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11720,786,936 - 20,831,761 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1720,786,936 - 20,831,055 (-)Ensemblpanpan1.1panPan2
GGNBP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1936,430,194 - 36,463,248 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl936,442,652 - 36,463,200 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha935,656,210 - 35,689,394 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0937,239,385 - 37,273,056 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl937,240,094 - 37,273,045 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1936,021,874 - 36,055,530 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0936,308,821 - 36,342,264 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0936,397,065 - 36,430,249 (+)NCBIUU_Cfam_GSD_1.0
Ggnbp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560235,403,096 - 35,439,392 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364901,635,443 - 1,671,089 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364901,635,443 - 1,671,057 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GGNBP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1238,074,094 - 38,111,710 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11238,074,033 - 38,111,719 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21239,695,001 - 39,730,210 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GGNBP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11631,200,734 - 31,261,040 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1631,200,740 - 31,260,305 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660771,950,206 - 2,000,923 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ggnbp2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248713,624,106 - 3,661,392 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248713,624,107 - 3,661,004 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Ggnbp2
1086 total Variants

Predicted Target Of
Summary Value
Count of predictions:1337
Count of miRNA genes:519
Interacting mature miRNAs:631
Transcripts:ENSMUST00000018547, ENSMUST00000100686, ENSMUST00000108081, ENSMUST00000132098, ENSMUST00000134043, ENSMUST00000154915, ENSMUST00000165459, ENSMUST00000166425, ENSMUST00000167429, ENSMUST00000168267, ENSMUST00000168434, ENSMUST00000170741, ENSMUST00000172405
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 51 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
27226783Tibl5_mtibia length 5, 5 week (mouse)1168190826101890826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166733420100733652Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170691198104691366Mouse
1300766Skull16_mskull morphology 16 (mouse)Not determined1181574481115574636Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172019649106019734Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
27226758Femd3_mfemur midshaft diameter 3, 5 week (mouse)1180890826101890826Mouse
1301640Lore4_mloss of righting induced by ethanol 4 (mouse)Not determined1179156009107616472Mouse
10412288Carg4_mCandida albicans resistance gene 4 (mouse)Not determined1181810267115810267Mouse

1 to 10 of 51 rows
AI451896  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381184,868,724 - 84,868,810UniSTSGRCm38
MGSCv371184,682,226 - 84,682,312UniSTSGRCm37
Celera1194,488,763 - 94,488,849UniSTS
Cytogenetic Map11CUniSTS
Whitehead/MRC_RH111089.35UniSTS
D11Mit195  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381184,840,498 - 84,840,636UniSTSGRCm38
MGSCv371184,654,000 - 84,654,138UniSTSGRCm37
Celera1194,460,401 - 94,460,539UniSTS
Cytogenetic Map11CUniSTS
cM Map1147.0UniSTS
Whitehead Genetic1143.7UniSTS
Whitehead_YAC11 UniSTS
C75939  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381184,869,127 - 84,869,293UniSTSGRCm38
MGSCv371184,682,629 - 84,682,795UniSTSGRCm37
Celera1194,489,166 - 94,489,332UniSTS
Cytogenetic Map11CUniSTS
Whitehead/MRC_RH111091.5UniSTS
RH127274  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381184,851,106 - 84,851,316UniSTSGRCm38
MGSCv371184,664,608 - 84,664,818UniSTSGRCm37
Celera1194,471,018 - 94,471,228UniSTS
Cytogenetic Map11CUniSTS
cM Map1148.0UniSTS
Zfp403  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381184,833,089 - 84,834,473UniSTSGRCm38
MGSCv371184,646,591 - 84,647,975UniSTSGRCm37
Celera1194,452,992 - 94,454,376UniSTS
Cytogenetic Map11CUniSTS
cM Map11 UniSTS
WI-16428  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381184,832,602 - 84,832,704UniSTSGRCm38
MGSCv371184,646,104 - 84,646,206UniSTSGRCm37
Celera1194,452,505 - 94,452,607UniSTS
Cytogenetic Map11CUniSTS






1 to 30 of 31 rows
RefSeq Transcripts NM_001364111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001364112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001364114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001364115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_153144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB064543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK084588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL596083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL645623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY633741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC060738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC139772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC145605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC150801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE982217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 31 rows

Ensembl Acc Id: ENSMUST00000018547   ⟹   ENSMUSP00000018547
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1184,723,687 - 84,761,472 (-)Ensembl
GRCm38.p6 Ensembl1184,832,861 - 84,870,646 (-)Ensembl
Ensembl Acc Id: ENSMUST00000100686   ⟹   ENSMUSP00000098252
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1184,723,798 - 84,761,566 (-)Ensembl
GRCm38.p6 Ensembl1184,832,972 - 84,870,740 (-)Ensembl
Ensembl Acc Id: ENSMUST00000108081   ⟹   ENSMUSP00000103716
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1184,723,187 - 84,761,615 (-)Ensembl
GRCm38.p6 Ensembl1184,832,361 - 84,870,789 (-)Ensembl
Ensembl Acc Id: ENSMUST00000132098   ⟹   ENSMUSP00000129898
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1184,724,962 - 84,727,294 (-)Ensembl
GRCm38.p6 Ensembl1184,834,136 - 84,836,468 (-)Ensembl
Ensembl Acc Id: ENSMUST00000134043
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1184,743,208 - 84,749,320 (-)Ensembl
GRCm38.p6 Ensembl1184,852,382 - 84,858,494 (-)Ensembl
Ensembl Acc Id: ENSMUST00000154915   ⟹   ENSMUSP00000117482
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1184,723,632 - 84,761,028 (-)Ensembl
GRCm38.p6 Ensembl1184,832,806 - 84,870,202 (-)Ensembl
Ensembl Acc Id: ENSMUST00000165459
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1184,744,796 - 84,751,485 (-)Ensembl
GRCm38.p6 Ensembl1184,853,970 - 84,860,659 (-)Ensembl
Ensembl Acc Id: ENSMUST00000166425   ⟹   ENSMUSP00000129794
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1184,751,545 - 84,761,317 (-)Ensembl
GRCm38.p6 Ensembl1184,860,719 - 84,870,491 (-)Ensembl
Ensembl Acc Id: ENSMUST00000167429
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1184,759,706 - 84,761,605 (-)Ensembl
GRCm38.p6 Ensembl1184,868,880 - 84,870,779 (-)Ensembl
Ensembl Acc Id: ENSMUST00000168267
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1184,727,247 - 84,728,810 (-)Ensembl
GRCm38.p6 Ensembl1184,836,421 - 84,837,984 (-)Ensembl
Ensembl Acc Id: ENSMUST00000168434   ⟹   ENSMUSP00000130013
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1184,723,187 - 84,761,643 (-)Ensembl
GRCm38.p6 Ensembl1184,832,361 - 84,870,817 (-)Ensembl
Ensembl Acc Id: ENSMUST00000170741   ⟹   ENSMUSP00000128109
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1184,725,338 - 84,761,551 (-)Ensembl
GRCm38.p6 Ensembl1184,834,512 - 84,870,725 (-)Ensembl
Ensembl Acc Id: ENSMUST00000172405   ⟹   ENSMUSP00000127584
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1184,723,187 - 84,761,564 (-)Ensembl
GRCm38.p6 Ensembl1184,832,361 - 84,870,738 (-)Ensembl
RefSeq Acc Id: NM_001364111   ⟹   NP_001351040
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391184,723,187 - 84,761,616 (-)NCBI
GRCm381184,832,361 - 84,870,790 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001364112   ⟹   NP_001351041
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391184,723,187 - 84,761,616 (-)NCBI
GRCm381184,832,361 - 84,870,790 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001364114   ⟹   NP_001351043
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391184,723,187 - 84,761,616 (-)NCBI
GRCm381184,832,361 - 84,870,790 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001364115   ⟹   NP_001351044
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391184,723,187 - 84,761,616 (-)NCBI
GRCm381184,832,361 - 84,870,790 (-)NCBI
Sequence:
RefSeq Acc Id: NM_153144   ⟹   NP_694784
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391184,723,187 - 84,761,616 (-)NCBI
GRCm381184,832,361 - 84,870,790 (-)NCBI
MGSCv371184,645,863 - 84,684,240 (-)RGD
Celera1194,452,264 - 94,490,756 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_017314471   ⟹   XP_017169960
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391184,723,187 - 84,761,351 (-)NCBI
GRCm381184,832,361 - 84,870,550 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314472   ⟹   XP_017169961
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391184,723,187 - 84,761,290 (-)NCBI
GRCm381184,832,361 - 84,870,464 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314473   ⟹   XP_017169962
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391184,723,187 - 84,761,646 (-)NCBI
GRCm381184,832,361 - 84,870,795 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245846   ⟹   XP_030101706
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391184,723,187 - 84,761,354 (-)NCBI
GRCm381184,832,361 - 84,870,553 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245847   ⟹   XP_030101707
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391184,723,187 - 84,761,354 (-)NCBI
GRCm381184,832,361 - 84,870,553 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245848   ⟹   XP_030101708
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391184,723,187 - 84,761,668 (-)NCBI
GRCm381184,832,361 - 84,870,837 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245849   ⟹   XP_030101709
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391184,723,187 - 84,761,621 (-)NCBI
GRCm381184,832,361 - 84,870,795 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245850   ⟹   XP_030101710
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391184,723,187 - 84,761,610 (-)NCBI
GRCm381184,832,361 - 84,870,785 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245851   ⟹   XP_030101711
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391184,723,187 - 84,761,601 (-)NCBI
GRCm381184,832,361 - 84,870,790 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245853   ⟹   XP_030101713
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391184,723,187 - 84,761,616 (-)NCBI
GRCm381184,832,361 - 84,870,790 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245854   ⟹   XP_030101714
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391184,723,187 - 84,761,616 (-)NCBI
GRCm381184,832,361 - 84,870,790 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156585   ⟹   XP_036012478
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391184,723,187 - 84,761,599 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156586   ⟹   XP_036012479
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391184,723,187 - 84,761,605 (-)NCBI
Sequence:
1 to 30 of 38 rows
Protein RefSeqs NP_001351040 (Get FASTA)   NCBI Sequence Viewer  
  NP_001351041 (Get FASTA)   NCBI Sequence Viewer  
  NP_001351043 (Get FASTA)   NCBI Sequence Viewer  
  NP_001351044 (Get FASTA)   NCBI Sequence Viewer  
  NP_694784 (Get FASTA)   NCBI Sequence Viewer  
  XP_017169960 (Get FASTA)   NCBI Sequence Viewer  
  XP_017169961 (Get FASTA)   NCBI Sequence Viewer  
  XP_017169962 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101706 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101707 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101708 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101709 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101710 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101711 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101713 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101714 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012478 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012479 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH60738 (Get FASTA)   NCBI Sequence Viewer  
  AAI39773 (Get FASTA)   NCBI Sequence Viewer  
  AAI45606 (Get FASTA)   NCBI Sequence Viewer  
  AAI50802 (Get FASTA)   NCBI Sequence Viewer  
  AAT47120 (Get FASTA)   NCBI Sequence Viewer  
  BAB71783 (Get FASTA)   NCBI Sequence Viewer  
  EDL15744 (Get FASTA)   NCBI Sequence Viewer  
  EDL15745 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000018547
  ENSMUSP00000018547.3
  ENSMUSP00000098252
  ENSMUSP00000103716
1 to 30 of 38 rows
1 to 5 of 27 rows
1 to 5 of 27 rows
RefSeq Acc Id: NP_694784   ⟸   NM_153144
- Peptide Label: isoform 3
- UniProtKB: H7BX83 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017169962   ⟸   XM_017314473
- Peptide Label: isoform X7
- UniProtKB: H7BX83 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017169961   ⟸   XM_017314472
- Peptide Label: isoform X5
- UniProtKB: H7BX83 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017169960   ⟸   XM_017314471
- Peptide Label: isoform X4
- UniProtKB: H7BX83 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030101708   ⟸   XM_030245848
- Peptide Label: isoform X3
- UniProtKB: H7BX83 (UniProtKB/TrEMBL)

Name Modeler Protein Id AA Range Protein Structure
AF-Q5SV77-F1-model_v2 AlphaFold Q5SV77 1-696 view protein structure

RGD ID:6820939
Promoter ID:MM_KWN:8959
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:OTTMUST00000002040
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361184,671,921 - 84,672,421 (-)MPROMDB
RGD ID:6820390
Promoter ID:MM_KWN:8960
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:AK143696_GM10374,   ENSMUST00000018547,   ENSMUST00000100684,   ENSMUST00000100685,   ENSMUST00000108081,   NM_153144,   UC007KQU.1,   UC007KQW.1,   UC007KQX.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361184,682,506 - 84,684,752 (+)MPROMDB
RGD ID:8675966
Promoter ID:EPDNEW_M16014
Type:initiation region
Name:Ggnbp2_2
Description:Mus musculus gametogenetin binding protein 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M16015  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381184,870,079 - 84,870,139EPDNEW
RGD ID:8675968
Promoter ID:EPDNEW_M16015
Type:initiation region
Name:Ggnbp2_1
Description:Mus musculus gametogenetin binding protein 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M16014  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381184,870,790 - 84,870,850EPDNEW


1 to 40 of 41 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000020530 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000018547 ENTREZGENE
  ENSMUST00000018547.9 UniProtKB/Swiss-Prot
  ENSMUST00000100686 ENTREZGENE
  ENSMUST00000108081 ENTREZGENE
  ENSMUST00000108081.9 UniProtKB/Swiss-Prot
  ENSMUST00000154915 ENTREZGENE
  ENSMUST00000154915.9 UniProtKB/Swiss-Prot
  ENSMUST00000168434 ENTREZGENE
  ENSMUST00000168434.8 UniProtKB/Swiss-Prot
  ENSMUST00000172405 ENTREZGENE
  ENSMUST00000172405.8 UniProtKB/Swiss-Prot
InterPro GGNBP2 UniProtKB/Swiss-Prot
KEGG Report mmu:217039 UniProtKB/Swiss-Prot
MGD MGI:2387356 ENTREZGENE
NCBI Gene 217039 ENTREZGENE
PANTHER GAMETOGENETIN-BINDING PROTEIN 2 UniProtKB/Swiss-Prot
  PTHR13601 UniProtKB/Swiss-Prot
PhenoGen Ggnbp2 PhenoGen
UniProt A4QPD5 ENTREZGENE
  B7ZP33 ENTREZGENE
  E9Q389_MOUSE UniProtKB/TrEMBL
  E9Q6H9_MOUSE UniProtKB/TrEMBL
  F6Y247_MOUSE UniProtKB/TrEMBL
  GGNB2_MOUSE UniProtKB/Swiss-Prot
  H7BX83 ENTREZGENE, UniProtKB/TrEMBL
  Q5SV75 ENTREZGENE
  Q5SV76 ENTREZGENE
  Q5SV77 ENTREZGENE
  Q5SV78 ENTREZGENE
  Q6GVH6 ENTREZGENE
  Q6P9J4 ENTREZGENE
  Q920N4 ENTREZGENE
UniProt Secondary A4QPD5 UniProtKB/Swiss-Prot
  B7ZP33 UniProtKB/Swiss-Prot
  Q5SV75 UniProtKB/Swiss-Prot
  Q5SV76 UniProtKB/Swiss-Prot
  Q5SV78 UniProtKB/Swiss-Prot
  Q6GVH6 UniProtKB/Swiss-Prot
  Q6P9J4 UniProtKB/Swiss-Prot
1 to 40 of 41 rows