Olfr394 (olfactory receptor 394) - Rat Genome Database
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Gene: Olfr394 (olfactory receptor 394) Mus musculus
Analyze
No known orthologs.
Symbol: Olfr394
Name: olfactory receptor 394
RGD ID: 1621271
MGI Page MGI
Description: Orthologous to several human genes including OR1E1 (olfactory receptor family 1 subfamily E member 1) and OR1E2 (olfactory receptor family 1 subfamily E member 2).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: GA_x6K02T2P1NL-4043306-4042374; MOR135; MOR135-8; olfactory receptor MOR135-8; RP23-360H16.2
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391173,778,264 - 73,779,196 (-)NCBIGRCm39mm39
GRCm39 Ensembl1173,774,163 - 73,781,597 (-)Ensembl
GRCm381173,887,438 - 73,888,370 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1173,883,337 - 73,890,771 (-)EnsemblGRCm38mm10GRCm38
MGSCv371173,700,940 - 73,701,872 (-)NCBIGRCm37mm9NCBIm37
MGSCv361173,703,633 - 73,704,565 (-)NCBImm8
Celera1181,419,003 - 81,419,935 (-)NCBICelera
Cytogenetic Map11B4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
1. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10706615   PMID:11014824   PMID:11802173   PMID:11875048   PMID:14611657   PMID:21873635  


Genomics

Position Markers
UniSTS:489491  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381173,887,438 - 73,888,370UniSTSGRCm38
MGSCv371173,700,940 - 73,701,872UniSTSGRCm37
Celera1181,419,003 - 81,419,935UniSTS
Cytogenetic Map11B4UniSTS
UniSTS:494373  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381173,887,340 - 73,888,405UniSTSGRCm38
MGSCv371173,700,842 - 73,701,907UniSTSGRCm37
Celera1181,418,905 - 81,419,970UniSTS
Cytogenetic Map11B4UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114236579176365904Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114236579176365904Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114473921176963931Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4141000Nidd3_mnon-insulin-dependent diabetes mellitus 3 (mouse)Not determined4515120179151308Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114527504680087498Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114629434180294436Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114642858180428696Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115859972974863932Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15861720487804412Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5882844085175703Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116179599488808902Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116226517996265327Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116342858181939647Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116342858194173092Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116493951098939647Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116493951098939647Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116493951098939647Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166842594100842826Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166842594100842826Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66842594100842826Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166842594100842826Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166842594100842826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166842594100842826Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116718736579923086Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168300000102000000Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170800372104800540Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170800372104800540Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170800372104800540Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170800372104800540Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172128823106128908Mouse
1301078Alcp2_malcohol preference locus 2 (mouse)Not determined117231897084840636Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172835299106835463Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172927789106927907Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172927789106927907Mouse
12903994Opfaq3_mopen field activity QTL 3 (mouse)117384671582178599Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:23
Count of miRNA genes:23
Interacting mature miRNAs:23
Transcripts:ENSMUST00000071478
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000071478   ⟹   ENSMUSP00000071415
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1173,887,438 - 73,888,370 (-)Ensembl
RefSeq Acc Id: ENSMUST00000214284   ⟹   ENSMUSP00000150236
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1173,883,337 - 73,890,771 (-)Ensembl
RefSeq Acc Id: ENSMUST00000216608   ⟹   ENSMUSP00000149527
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1173,883,337 - 73,890,771 (-)Ensembl
RefSeq Acc Id: NM_147007   ⟹   NP_667218
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391173,778,264 - 73,779,196 (-)NCBI
GRCm381173,887,438 - 73,888,370 (-)ENTREZGENE
MGSCv371173,700,940 - 73,701,872 (-)RGD
Celera1181,419,003 - 81,419,935 (-)RGD
cM Map11 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_667218   ⟸   NM_147007
- UniProtKB: Q8VGR5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000071415   ⟸   ENSMUST00000071478
RefSeq Acc Id: ENSMUSP00000149527   ⟸   ENSMUST00000216608
RefSeq Acc Id: ENSMUSP00000150236   ⟸   ENSMUST00000214284
Protein Domains
G_PROTEIN_RECEP_F1_2


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3030228 AgrOrtholog
Ensembl Genes ENSMUSG00000056921 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000071415 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000149527 UniProtKB/TrEMBL
  ENSMUSP00000150236 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000071478 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000214284 UniProtKB/TrEMBL
  ENSMUST00000216608 UniProtKB/TrEMBL
InterPro 7TM_GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_supfam UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report mmu:259009 UniProtKB/TrEMBL
MGD MGI:3030228 ENTREZGENE
NCBI Gene 259009 ENTREZGENE
Pfam 7tm_4 UniProtKB/TrEMBL
PhenoGen Olfr394 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
SMART 7TM_GPCR_Srsx UniProtKB/TrEMBL
UniProt Q8VGR5 ENTREZGENE, UniProtKB/TrEMBL