Ankfy1 (ankyrin repeat and FYVE domain containing 1) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Ankfy1 (ankyrin repeat and FYVE domain containing 1) Mus musculus
Analyze
Symbol: Ankfy1
Name: ankyrin repeat and FYVE domain containing 1
RGD ID: 1320022
MGI Page MGI
Description: Predicted to enable phosphatidylinositol phosphate binding activity and small GTPase binding activity. Predicted to be involved in cytosolic transport; endosomal vesicle fusion; and positive regulation of pinocytosis. Located in endosome membrane. Is expressed in several structures, including adipose tissue; alimentary system; central nervous system; eye; and genitourinary system. Used to study Charlevoix-Saguenay spastic ataxia. Orthologous to human ANKFY1 (ankyrin repeat and FYVE domain containing 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Ank; Ankhzn; ankyrin repeat and FYVE domain-containing protein 1; ankyrin repeat hooked to a zinc finger motif; ankyrin repeat hooked to zinc finger motif; ankyrin repeats hooked to a zinc finger motif; mKIAA1255; Rabankyrin-5; rank-5; ZFYVE14
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391172,580,828 - 72,662,972 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1172,580,832 - 72,662,972 (+)EnsemblGRCm39 Ensembl
GRCm381172,690,002 - 72,772,146 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1172,690,006 - 72,772,146 (+)EnsemblGRCm38mm10GRCm38
MGSCv371172,503,504 - 72,585,648 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361172,506,197 - 72,588,341 (+)NCBIMGSCv36mm8
Celera1180,215,482 - 80,300,299 (+)NCBICelera
Cytogenetic Map11B4NCBI
cM Map1144.47NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, etal., DNA Res 2003 Feb 28;10(1):35-48.
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10092534   PMID:10349636   PMID:10922068   PMID:10940552   PMID:11042159   PMID:11076861   PMID:11423996   PMID:12466305   PMID:12477932   PMID:12520002   PMID:12833855   PMID:15226823  
PMID:15328530   PMID:16141072   PMID:16141073   PMID:16602821   PMID:16778019   PMID:18287559   PMID:18799693   PMID:20412781   PMID:21267068   PMID:21873635   PMID:22988430   PMID:24194600  
PMID:24457600   PMID:26496610   PMID:28123425   PMID:28378742   PMID:28588446   PMID:28671696   PMID:30550785   PMID:32325033   PMID:32888949   PMID:33796010   PMID:38187761  


Genomics

Comparative Map Data
Ankfy1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391172,580,828 - 72,662,972 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1172,580,832 - 72,662,972 (+)EnsemblGRCm39 Ensembl
GRCm381172,690,002 - 72,772,146 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1172,690,006 - 72,772,146 (+)EnsemblGRCm38mm10GRCm38
MGSCv371172,503,504 - 72,585,648 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361172,506,197 - 72,588,341 (+)NCBIMGSCv36mm8
Celera1180,215,482 - 80,300,299 (+)NCBICelera
Cytogenetic Map11B4NCBI
cM Map1144.47NCBI
ANKFY1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38174,163,821 - 4,263,979 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl174,163,821 - 4,263,995 (-)EnsemblGRCh38hg38GRCh38
GRCh37174,067,115 - 4,167,274 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36174,013,414 - 4,114,023 (-)NCBINCBI36Build 36hg18NCBI36
Celera174,078,241 - 4,178,752 (-)NCBICelera
Cytogenetic Map17p13.2NCBI
HuRef173,956,187 - 4,056,210 (-)NCBIHuRef
CHM1_1174,075,451 - 4,176,034 (-)NCBICHM1_1
T2T-CHM13v2.0174,053,058 - 4,153,220 (-)NCBIT2T-CHM13v2.0
Ankfy1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81057,810,781 - 57,882,495 (+)NCBIGRCr8
mRatBN7.21057,312,246 - 57,383,964 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1057,312,246 - 57,383,964 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1061,972,571 - 62,044,957 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01061,461,046 - 61,533,430 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01056,960,126 - 57,032,510 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01059,259,955 - 59,331,669 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1059,259,955 - 59,331,669 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01058,997,865 - 59,069,490 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41059,582,425 - 59,654,290 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11059,596,108 - 59,665,081 (+)NCBI
Celera1056,435,792 - 56,509,309 (+)NCBICelera
Cytogenetic Map10q24NCBI
Ankfy1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546712,644,098 - 12,730,711 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495546712,644,070 - 12,734,546 (+)NCBIChiLan1.0ChiLan1.0
ANKFY1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21911,779,566 - 11,877,643 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11713,745,143 - 13,843,219 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0174,217,880 - 4,316,017 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1174,209,243 - 4,307,339 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl174,209,250 - 4,307,328 (-)Ensemblpanpan1.1panPan2
ANKFY1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1530,246,440 - 30,328,618 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl530,249,280 - 30,328,962 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha530,442,275 - 30,524,309 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0530,346,869 - 30,428,697 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl530,346,869 - 30,428,650 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1530,312,894 - 30,395,194 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0530,271,279 - 30,353,556 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0530,444,643 - 30,526,954 (-)NCBIUU_Cfam_GSD_1.0
Ankfy1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560255,064,503 - 55,154,569 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936677749,379 - 836,480 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936677746,408 - 836,495 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANKFY1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1250,168,049 - 50,251,768 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11250,167,959 - 50,251,861 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21252,123,883 - 52,181,151 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ANKFY1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1163,640,550 - 3,737,390 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl163,644,499 - 3,737,346 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605917,957,338 - 18,055,997 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ankfy1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247866,759,176 - 6,856,189 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247866,759,169 - 6,856,241 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ankfy1
1603 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:4841
Count of miRNA genes:916
Interacting mature miRNAs:1318
Transcripts:ENSMUST00000102548, ENSMUST00000127610, ENSMUST00000132889, ENSMUST00000147195, ENSMUST00000150172, ENSMUST00000155998
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114225661776256730Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114225661776256730Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114463003876854757Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114631940780319522Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115007819184078411Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115249438586494385Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115339058887390737Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115412675283733652Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115775466091754758Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115849055574754758Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15850803087695238Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5871926685066529Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116168682088699728Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116215600596156153Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116331940781830473Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116331940794063918Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116483033698830473Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116483033698830473Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116483033698830473Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166733420100733652Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166733420100733652Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166733420100733652Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166733420100733652Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66733420100733652Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166733420100733652Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116707819179813912Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168190826101890826Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170691198104691366Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170691198104691366Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170691198104691366Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170691198104691366Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172019649106019734Mouse
1301078Alcp2_malcohol preference locus 2 (mouse)Not determined117220979684731462Mouse

Markers in Region
AB011370  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381172,769,644 - 72,769,740UniSTSGRCm38
MGSCv371172,583,146 - 72,583,242UniSTSGRCm37
Celera1180,297,257 - 80,297,353UniSTS
Cytogenetic Map11B4UniSTS
Whitehead/MRC_RH11928.56UniSTS
D9Mit34.1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7F1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map2C1.3UniSTS
Cytogenetic Map19D1UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11B4UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map1C1.3UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map2E2UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map1E3UniSTS
Cytogenetic Map5E1UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map16B3UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map19D3UniSTS
Cytogenetic Map1H5UniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map9DUniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map17DUniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map13A1UniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map12A3UniSTS
Cytogenetic Map1H2.1UniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map6A2UniSTS
Cytogenetic Map7B1UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map5C3.1UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map11B1.1UniSTS
Cytogenetic Map1H6UniSTS
Cytogenetic Map2C2UniSTS
Cytogenetic Map19CUniSTS
Cytogenetic Map17E1.3UniSTS
Cytogenetic Map5A1UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map13A5UniSTS
Cytogenetic MapXA1.1UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map3A3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map8CUniSTS
Cytogenetic Map12EUniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map1H1UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map1A2UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXC-DUniSTS
Cytogenetic Map5G1.3UniSTS
Cytogenetic Map7D1-E2UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map1H2.2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map16C1.1UniSTS
Cytogenetic Map15F2UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map1H4-H6UniSTS
Cytogenetic Map12D2UniSTS
Cytogenetic Map1G3UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map1H3UniSTS
Cytogenetic Map19BUniSTS
cM Map950.0UniSTS
Whitehead Genetic943.7UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_009671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB011370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB098157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB098329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL663082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL808023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC004609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC139231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC145583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ550282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CV557421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ716509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000102548
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,602,983 - 72,658,414 (+)Ensembl
GRCm38.p6 Ensembl1172,712,157 - 72,767,588 (+)Ensembl
RefSeq Acc Id: ENSMUST00000127610   ⟹   ENSMUSP00000118252
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,580,832 - 72,662,047 (+)Ensembl
GRCm38.p6 Ensembl1172,690,006 - 72,771,221 (+)Ensembl
RefSeq Acc Id: ENSMUST00000132889
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,655,293 - 72,658,579 (+)Ensembl
GRCm38.p6 Ensembl1172,764,467 - 72,767,753 (+)Ensembl
RefSeq Acc Id: ENSMUST00000147195
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,650,742 - 72,651,716 (+)Ensembl
GRCm38.p6 Ensembl1172,759,916 - 72,760,890 (+)Ensembl
RefSeq Acc Id: ENSMUST00000150172
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,580,832 - 72,616,006 (+)Ensembl
GRCm38.p6 Ensembl1172,690,006 - 72,725,180 (+)Ensembl
RefSeq Acc Id: ENSMUST00000155998   ⟹   ENSMUSP00000118751
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,580,832 - 72,662,972 (+)Ensembl
GRCm38.p6 Ensembl1172,690,006 - 72,772,146 (+)Ensembl
RefSeq Acc Id: NM_009671   ⟹   NP_033801
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391172,580,828 - 72,662,972 (+)NCBI
GRCm381172,690,002 - 72,772,146 (+)ENTREZGENE
MGSCv371172,503,504 - 72,585,648 (+)RGD
Celera1180,215,482 - 80,300,299 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030245484   ⟹   XP_030101344
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391172,580,837 - 72,662,328 (+)NCBI
GRCm381172,712,155 - 72,771,269 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036156245   ⟹   XP_036012138
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391172,580,837 - 72,662,328 (+)NCBI
Sequence:
RefSeq Acc Id: NP_033801   ⟸   NM_009671
- UniProtKB: Q80TG6 (UniProtKB/Swiss-Prot),   O54807 (UniProtKB/Swiss-Prot),   B1ATS3 (UniProtKB/Swiss-Prot),   Q80UH8 (UniProtKB/Swiss-Prot),   Q810B6 (UniProtKB/Swiss-Prot),   B7ZP20 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030101344   ⟸   XM_030245484
- Peptide Label: isoform X2
RefSeq Acc Id: ENSMUSP00000118252   ⟸   ENSMUST00000127610
RefSeq Acc Id: ENSMUSP00000118751   ⟸   ENSMUST00000155998
RefSeq Acc Id: XP_036012138   ⟸   XM_036156245
- Peptide Label: isoform X1
- UniProtKB: B7ZP20 (UniProtKB/TrEMBL)
Protein Domains
BTB   FYVE-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q810B6-F1-model_v2 AlphaFold Q810B6 1-1169 view protein structure

Promoters
RGD ID:6820397
Promoter ID:MM_KWN:8335
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_009671,   OTTMUST00000013820,   UC007JZG.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361172,503,261 - 72,503,761 (+)MPROMDB
RGD ID:6820378
Promoter ID:MM_KWN:8338
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour
Transcripts:OTTMUST00000013822
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361172,577,571 - 72,578,071 (+)MPROMDB
RGD ID:8675450
Promoter ID:EPDNEW_M15756
Type:multiple initiation site
Name:Ankfy1_1
Description:Mus musculus ankyrin repeat and FYVE domain containing 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15757  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381172,690,006 - 72,690,066EPDNEW
RGD ID:8675454
Promoter ID:EPDNEW_M15757
Type:multiple initiation site
Name:Ankfy1_2
Description:Mus musculus ankyrin repeat and FYVE domain containing 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15756  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381172,699,159 - 72,699,219EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1337008 AgrOrtholog
Ensembl Genes ENSMUSG00000020790 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000127610.8 UniProtKB/Swiss-Prot
  ENSMUST00000155998 ENTREZGENE
  ENSMUST00000155998.2 UniProtKB/Swiss-Prot
Gene3D-CATH 1.25.40.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BTB/POZ_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SKP1/BTB/POZ_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_FYVE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_FYVE-rel UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_FYVE_PHD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:11736 UniProtKB/Swiss-Prot
MGD MGI:1337008 ENTREZGENE
NCBI Gene 11736 ENTREZGENE
PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  POTE ANKYRIN DOMAIN UniProtKB/Swiss-Prot
  RABANKYRIN-5 UniProtKB/Swiss-Prot
Pfam Ank UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ank_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FYVE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ankfy1 PhenoGen
PRINTS ANKYRIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_FYVE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ANK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FYVE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF54695 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF57903 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt ANFY1_MOUSE UniProtKB/Swiss-Prot
  B1ATS3 ENTREZGENE
  B7ZP20 ENTREZGENE, UniProtKB/TrEMBL
  O54807 ENTREZGENE
  Q80TG6 ENTREZGENE
  Q80UH8 ENTREZGENE
  Q810B6 ENTREZGENE
UniProt Secondary B1ATS3 UniProtKB/Swiss-Prot
  O54807 UniProtKB/Swiss-Prot
  Q80TG6 UniProtKB/Swiss-Prot
  Q80UH8 UniProtKB/Swiss-Prot