Spag5 (sperm associated antigen 5) - Rat Genome Database

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Gene: Spag5 (sperm associated antigen 5) Mus musculus
Analyze
Symbol: Spag5
Name: sperm associated antigen 5
RGD ID: 736243
MGI Page MGI
Description: Predicted to enable microtubule binding activity. Acts upstream of or within establishment of spindle orientation. Located in ciliary basal body; ciliary rootlet; and mitotic spindle. Is expressed in several structures, including alimentary system; brain; genitourinary system; integumental system; and sensory organ. Orthologous to human SPAG5 (sperm associated antigen 5).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: A; AI874642; astrin; D11Bhm180e; Deepe; Deepest; Ma; MAP1; MAP126; Mastrin; microtubule-associated protein; mitotic spindle-associated protein p126; S1; S17; sperm-associated antigen 5
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391178,192,412 - 78,213,283 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1178,192,355 - 78,213,283 (+)EnsemblGRCm39 Ensembl
GRCm381178,301,470 - 78,322,457 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1178,301,529 - 78,322,457 (+)EnsemblGRCm38mm10GRCm38
MGSCv371178,115,093 - 78,135,956 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361178,117,831 - 78,138,649 (+)NCBIMGSCv36mm8
MGSCv361178,942,054 - 78,963,041 (+)NCBIMGSCv36mm8
Cytogenetic Map11B5NCBI
cM Map1146.74NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3-dimethoxynaphthalene-1,4-dione  (ISO)
2,4,6-tribromophenol  (ISO)
2,4-diaminotoluene  (EXP)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3-methylcholanthrene  (EXP)
4-hydroxynon-2-enal  (EXP)
5-azacytidine  (ISO)
5-fluorouracil  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
antimycin A  (ISO)
arsenite(3-)  (ISO)
azathioprine  (ISO)
azoxystrobin  (ISO)
benzene  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (EXP)
beta-naphthoflavone  (ISO)
bisphenol A  (ISO)
Bisphenol A diglycidyl ether  (EXP)
caffeine  (ISO)
calcitriol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
chloroprene  (EXP)
chlorpyrifos  (EXP)
copper(II) sulfate  (ISO)
coumarin  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
decabromodiphenyl ether  (ISO)
deguelin  (ISO)
deoxynivalenol  (ISO)
diallyl trisulfide  (ISO)
diazinon  (ISO)
dibutyl phthalate  (EXP)
dichloroacetic acid  (EXP)
dieldrin  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
Enterolactone  (ISO)
fenpyroximate  (ISO)
flavonoids  (ISO)
folic acid  (ISO)
FR900359  (ISO)
furan  (ISO)
genistein  (ISO)
gentamycin  (ISO)
glycidyl methacrylate  (ISO)
hydrogen peroxide  (ISO)
ivermectin  (ISO)
lithium chloride  (ISO)
lucanthone  (ISO)
menadione  (ISO)
methotrexate  (ISO)
N-nitrosodiethylamine  (ISO)
N-Nitrosopyrrolidine  (ISO)
nickel atom  (ISO)
nickel dichloride  (ISO)
oxaliplatin  (ISO)
ozone  (EXP)
paracetamol  (ISO)
perfluorononanoic acid  (ISO)
phenobarbital  (EXP)
phorbol 13-acetate 12-myristate  (ISO)
picoxystrobin  (ISO)
pirinixic acid  (EXP)
piroxicam  (ISO)
pravastatin  (EXP,ISO)
progesterone  (ISO)
propanal  (ISO)
propiconazole  (EXP)
pyrimidifen  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
silicon dioxide  (EXP)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenite  (EXP,ISO)
sunitinib  (ISO)
tamoxifen  (EXP)
tebufenpyrad  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (ISO)
tetrachloroethene  (ISO)
thalidomide  (ISO)
thapsigargin  (ISO)
thifluzamide  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP,ISO)
topotecan  (ISO)
trichloroethene  (ISO)
trichostatin A  (ISO)
trimellitic anhydride  (EXP)
troglitazone  (ISO)
trovafloxacin  (EXP)
tungsten  (EXP)
tunicamycin  (ISO)
valproic acid  (ISO)
zaragozic acid A  (EXP,ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. The splicing factor SF3B4 drives proliferation and invasion in cervical cancer by regulating SPAG5. Li Y, etal., Cell Death Discov. 2022 Jul 19;8(1):326. doi: 10.1038/s41420-022-01120-3.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. MGD IEA MGD IEA
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7626882   PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11468777   PMID:11544199   PMID:11724960   PMID:11884588   PMID:12466851  
PMID:12477932   PMID:12520002   PMID:12893248   PMID:14610273   PMID:14681479   PMID:15475267   PMID:15489334   PMID:16141072   PMID:16141073   PMID:19521500   PMID:19806032   PMID:20360068  
PMID:21267068   PMID:21440680   PMID:22031545   PMID:23351521   PMID:26410627   PMID:30635555   PMID:32325033   PMID:33798452   PMID:33899739   PMID:35012549   PMID:35905187  


Genomics

Comparative Map Data
Spag5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391178,192,412 - 78,213,283 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1178,192,355 - 78,213,283 (+)EnsemblGRCm39 Ensembl
GRCm381178,301,470 - 78,322,457 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1178,301,529 - 78,322,457 (+)EnsemblGRCm38mm10GRCm38
MGSCv371178,115,093 - 78,135,956 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361178,117,831 - 78,138,649 (+)NCBIMGSCv36mm8
MGSCv361178,942,054 - 78,963,041 (+)NCBIMGSCv36mm8
Cytogenetic Map11B5NCBI
cM Map1146.74NCBI
SPAG5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381728,577,574 - 28,599,025 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1728,577,565 - 28,599,025 (-)EnsemblGRCh38hg38GRCh38
GRCh371726,904,592 - 26,926,043 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361723,928,710 - 23,950,183 (-)NCBINCBI36Build 36hg18NCBI36
Build 341723,928,714 - 23,950,424NCBI
Celera1723,763,610 - 23,785,083 (-)NCBICelera
Cytogenetic Map17q11.2NCBI
HuRef1723,113,449 - 23,134,908 (-)NCBIHuRef
CHM1_11726,966,284 - 26,987,756 (-)NCBICHM1_1
T2T-CHM13v2.01729,520,199 - 29,541,650 (-)NCBIT2T-CHM13v2.0
Spag5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81063,693,300 - 63,714,813 (+)NCBIGRCr8
mRatBN7.21063,198,717 - 63,216,746 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1063,198,768 - 63,216,745 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1067,831,072 - 67,849,047 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01067,336,421 - 67,354,396 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01062,807,538 - 62,825,524 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01065,552,780 - 65,585,773 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1065,552,897 - 65,556,749 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1065,566,171 - 65,585,760 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01066,053,385 - 66,084,464 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41064,313,146 - 64,330,975 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11064,326,769 - 64,334,196 (-)NCBI
Celera1062,176,453 - 62,194,416 (+)NCBICelera
Celera1062,162,995 - 62,167,500 (+)NCBICelera
Cytogenetic Map10q25NCBI
Spag5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554814,558,851 - 4,576,038 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554814,558,748 - 4,576,320 (+)NCBIChiLan1.0ChiLan1.0
SPAG5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21935,860,426 - 35,882,751 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11737,739,700 - 37,762,872 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01728,176,288 - 28,198,493 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11728,680,068 - 28,702,050 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1728,680,492 - 28,702,050 (+)Ensemblpanpan1.1panPan2
SPAG5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1942,783,224 - 42,804,568 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl942,783,235 - 42,804,456 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha941,939,889 - 41,961,225 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0943,601,964 - 43,623,286 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl943,601,972 - 43,635,538 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1942,385,037 - 42,406,479 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0942,677,736 - 42,699,021 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0942,755,160 - 42,776,506 (-)NCBIUU_Cfam_GSD_1.0
Spag5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560241,925,407 - 41,943,095 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365384,803,585 - 4,820,885 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365384,803,536 - 4,821,034 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SPAG5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1244,827,949 - 44,848,566 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11244,827,947 - 44,848,527 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21246,812,355 - 46,833,267 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SPAG5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11622,347,213 - 22,370,531 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1622,346,701 - 22,369,915 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660757,755,153 - 7,779,617 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Spag5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247861,163,606 - 1,182,764 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247861,163,350 - 1,183,071 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Spag5
548 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:943
Count of miRNA genes:547
Interacting mature miRNAs:654
Transcripts:ENSMUST00000045026, ENSMUST00000125477, ENSMUST00000128359, ENSMUST00000133579, ENSMUST00000141026, ENSMUST00000146068, ENSMUST00000149711, ENSMUST00000150016
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114631940780319522Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115007819184078411Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115249438586494385Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115339058887390737Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115412675283733652Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115775466091754758Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15850803087695238Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5871926685066529Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116168682088699728Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116215600596156153Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116331940781830473Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116331940794063918Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116483033698830473Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116483033698830473Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116483033698830473Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166733420100733652Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166733420100733652Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166733420100733652Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166733420100733652Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66733420100733652Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166733420100733652Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116707819179813912Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168190826101890826Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170691198104691366Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170691198104691366Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170691198104691366Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170691198104691366Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172019649106019734Mouse
1301078Alcp2_malcohol preference locus 2 (mouse)Not determined117220979684731462Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172726125106726289Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172818615106818733Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172818615106818733Mouse
12903994Opfaq3_mopen field activity QTL 3 (mouse)117373754182069425Mouse
11038695Par8_mpulmonary adenoma resistance 8 (mouse)1177063779111063918Mouse
1301414Heal10_mwound healing/regeneration 10 (mouse)Not determined1177437183111437322Mouse
10045616Heal25_mwound healing/regeneration 25 (mouse)Not determined1177437183111437322Mouse
4141365Ltxs3_mlethal factor toxin susceptibility 3 (mouse)Not determined117757387380746358Mouse
1302124Eae7_msusceptibility to experimental allergic encephalomyelitis 7 (mouse)Not determined117757387399377820Mouse
10413882Moe1_mmodifier of epilepsy 1 (mouse)1177770978111771099Mouse

Markers in Region
AI874642  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381178,321,499 - 78,321,700UniSTSGRCm38
MGSCv371178,135,001 - 78,135,202UniSTSGRCm37
Cytogenetic Map11B5UniSTS
cM Map1144.95UniSTS
Whitehead/MRC_RH11995.76UniSTS
D11Bhm49  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381178,302,631 - 78,302,873UniSTSGRCm38
MGSCv371178,116,133 - 78,116,375UniSTSGRCm37
Cytogenetic Map11B5UniSTS
cM Map1144.94UniSTS
D11Bhm50  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381178,313,658 - 78,313,840UniSTSGRCm38
MGSCv371178,127,160 - 78,127,342UniSTSGRCm37
Cytogenetic Map11B5UniSTS
cM Map1144.96UniSTS
D11Seg15  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381178,299,903 - 78,300,051UniSTSGRCm38
MGSCv371178,113,405 - 78,113,553UniSTSGRCm37
Cytogenetic Map11B5UniSTS
cM Map1144.97UniSTS
D11Seg16  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381178,319,316 - 78,319,487UniSTSGRCm38
MGSCv371178,132,818 - 78,132,989UniSTSGRCm37
Cytogenetic Map11B5UniSTS
cM Map1144.97UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_017407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_156178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001780026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001780027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003949480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF420307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK076619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL591070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY226907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC026715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC052672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X81633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000045026   ⟹   ENSMUSP00000045286
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1178,192,355 - 78,213,283 (+)Ensembl
GRCm38.p6 Ensembl1178,301,529 - 78,322,457 (+)Ensembl
RefSeq Acc Id: ENSMUST00000125477
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1178,210,752 - 78,211,566 (+)Ensembl
GRCm38.p6 Ensembl1178,319,926 - 78,320,740 (+)Ensembl
RefSeq Acc Id: ENSMUST00000128359
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1178,208,788 - 78,211,201 (+)Ensembl
GRCm38.p6 Ensembl1178,317,962 - 78,320,375 (+)Ensembl
RefSeq Acc Id: ENSMUST00000133579
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1178,192,450 - 78,206,016 (+)Ensembl
GRCm38.p6 Ensembl1178,301,624 - 78,315,190 (+)Ensembl
RefSeq Acc Id: ENSMUST00000141026
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1178,203,941 - 78,204,910 (+)Ensembl
GRCm38.p6 Ensembl1178,313,115 - 78,314,084 (+)Ensembl
RefSeq Acc Id: ENSMUST00000146068
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1178,192,481 - 78,205,689 (+)Ensembl
GRCm38.p6 Ensembl1178,301,655 - 78,314,863 (+)Ensembl
RefSeq Acc Id: ENSMUST00000149711
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1178,206,726 - 78,210,724 (+)Ensembl
GRCm38.p6 Ensembl1178,315,900 - 78,319,898 (+)Ensembl
RefSeq Acc Id: ENSMUST00000150016
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1178,206,183 - 78,206,867 (+)Ensembl
GRCm38.p6 Ensembl1178,315,357 - 78,316,041 (+)Ensembl
RefSeq Acc Id: NM_017407   ⟹   NP_059103
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391178,192,417 - 78,213,283 (+)NCBI
GRCm381178,301,591 - 78,322,457 (+)NCBI
MGSCv371178,115,093 - 78,135,956 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_156178
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391178,192,417 - 78,213,283 (+)NCBI
GRCm381178,301,591 - 78,322,457 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036156853   ⟹   XP_036012746
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391178,195,974 - 78,213,280 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001780026
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391178,192,412 - 78,213,280 (+)NCBI
GRCm381178,301,586 - 78,322,454 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001780027
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391178,192,412 - 78,213,280 (+)NCBI
GRCm381178,301,586 - 78,322,454 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003949480
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391178,192,417 - 78,213,280 (+)NCBI
GRCm381178,301,470 - 78,322,454 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004936991
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391178,192,412 - 78,213,272 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004936992
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391178,192,417 - 78,213,280 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_059103 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012746 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH52672 (Get FASTA)   NCBI Sequence Viewer  
  AAO15441 (Get FASTA)   NCBI Sequence Viewer  
  AAP46103 (Get FASTA)   NCBI Sequence Viewer  
  CAA57287 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000045286
  ENSMUSP00000045286.4
GenBank Protein Q7TME2 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_059103   ⟸   NM_017407
- UniProtKB: B1AQC8 (UniProtKB/Swiss-Prot),   Q8CH61 (UniProtKB/Swiss-Prot),   Q7TME2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000045286   ⟸   ENSMUST00000045026
RefSeq Acc Id: XP_036012746   ⟸   XM_036156853
- Peptide Label: isoform X1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q7TME2-F1-model_v2 AlphaFold Q7TME2 1-1165 view protein structure

Promoters
RGD ID:6822194
Promoter ID:MM_KWN:8695
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   MEF_B4
Transcripts:OTTMUST00000000345,   OTTMUST00000000346,   OTTMUST00000000347
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361178,114,861 - 78,115,361 (+)MPROMDB
RGD ID:8675810
Promoter ID:EPDNEW_M15885
Type:initiation region
Name:Spag5_1
Description:Mus musculus sperm associated antigen 5 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381178,301,624 - 78,301,684EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1927470 AgrOrtholog
Ensembl Genes ENSMUSG00000002055 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000045026 ENTREZGENE
  ENSMUST00000045026.4 UniProtKB/Swiss-Prot
InterPro Astrin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:54141 UniProtKB/Swiss-Prot
MGD MGI:1927470 ENTREZGENE
NCBI Gene 54141 ENTREZGENE
PANTHER PTHR15347 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SPERM-ASSOCIATED ANTIGEN 5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Spag5 PhenoGen
UniProt B1AQC8 ENTREZGENE
  Q62200_MOUSE UniProtKB/TrEMBL
  Q7TME2 ENTREZGENE
  Q8CH61 ENTREZGENE
  SPAG5_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary B1AQC8 UniProtKB/Swiss-Prot
  Q8CH61 UniProtKB/Swiss-Prot