Rab34 (RAB34, member RAS oncogene family) - Rat Genome Database

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Gene: Rab34 (RAB34, member RAS oncogene family) Mus musculus
Analyze
Symbol: Rab34
Name: RAB34, member RAS oncogene family
RGD ID: 1312862
MGI Page MGI
Description: Enables GTPase activity and guanyl nucleotide binding activity. Involved in several processes, including Golgi to plasma membrane protein transport; phagosome-lysosome fusion; and positive regulation of protein localization to phagocytic vesicle. Acts upstream of or within endocytosis. Located in Golgi apparatus; endosome; and ruffle. Colocalizes with phagocytic vesicle. Is expressed in several structures, including adrenal gland; alimentary system; brain; genitourinary system; and respiratory system. Orthologous to human RAB34 (RAB34, member RAS oncogene family); INTERACTS WITH 1,2-dimethylhydrazine; 2,3',4,4',5-Pentachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI326479; Narr; Ra; rab-39; RAB34, member of RAS oncogene family; Rah; Rah1; ras-related homolog; ras-related protein Rab-34; ras-related protein Rab-39; ras-related protein Rah
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391178,079,253 - 78,083,019 (+)NCBIGRCm39mm39
GRCm39 Ensembl1178,079,256 - 78,083,019 (+)Ensembl
GRCm381178,188,427 - 78,192,193 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1178,188,430 - 78,192,193 (+)EnsemblGRCm38mm10GRCm38
MGSCv371178,001,929 - 78,005,695 (+)NCBIGRCm37mm9NCBIm37
MGSCv361178,005,029 - 78,008,383 (+)NCBImm8
Celera1186,235,424 - 86,236,412 (-)NCBICelera
Cytogenetic Map11B5NCBI
cM Map1146.74NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Additional References at PubMed
PMID:1752434   PMID:7490093   PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11773082   PMID:11856727   PMID:12446704   PMID:12475955   PMID:12477932   PMID:12578829  
PMID:14610273   PMID:15489334   PMID:15761153   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16923123   PMID:17442700   PMID:17881736   PMID:21267068   PMID:21586586   PMID:21873635  
PMID:22275436   PMID:23197834   PMID:23871933   PMID:24194600   PMID:25044020   PMID:27626380   PMID:28700664   PMID:29290584   PMID:29991022   PMID:30301781   PMID:30550785  


Genomics

Comparative Map Data
Rab34
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391178,079,253 - 78,083,019 (+)NCBIGRCm39mm39
GRCm39 Ensembl1178,079,256 - 78,083,019 (+)Ensembl
GRCm381178,188,427 - 78,192,193 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1178,188,430 - 78,192,193 (+)EnsemblGRCm38mm10GRCm38
MGSCv371178,001,929 - 78,005,695 (+)NCBIGRCm37mm9NCBIm37
MGSCv361178,005,029 - 78,008,383 (+)NCBImm8
Celera1186,235,424 - 86,236,412 (-)NCBICelera
Cytogenetic Map11B5NCBI
cM Map1146.74NCBI
RAB34
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1728,714,281 - 28,718,429 (-)EnsemblGRCh38hg38GRCh38
GRCh381728,714,281 - 28,718,440 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371727,041,299 - 27,045,286 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361724,065,430 - 24,069,013 (-)NCBINCBI36hg18NCBI36
Build 341724,065,429 - 24,069,013NCBI
Celera1723,900,465 - 23,904,451 (-)NCBI
Cytogenetic Map17q11.2NCBI
HuRef1723,250,199 - 23,254,186 (-)NCBIHuRef
CHM1_11727,103,771 - 27,107,758 (-)NCBICHM1_1
Rab34
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21063,083,319 - 63,087,538 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1063,083,338 - 63,087,538 (+)Ensembl
Rnor_6.01065,448,111 - 65,452,178 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1065,448,950 - 65,452,177 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01066,182,984 - 66,186,924 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41064,443,111 - 64,447,315 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11064,456,734 - 64,460,258 (-)NCBI
Celera1062,060,981 - 62,065,049 (+)NCBICelera
Cytogenetic Map10q25NCBI
Rab34
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554814,441,407 - 4,445,969 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554814,441,290 - 4,445,969 (+)NCBIChiLan1.0ChiLan1.0
RAB34
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11728,562,064 - 28,566,242 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1728,562,118 - 28,566,242 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01728,057,077 - 28,061,234 (+)NCBIMhudiblu_PPA_v0panPan3
RAB34
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1942,909,843 - 42,913,935 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl942,910,011 - 42,913,985 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha942,065,612 - 42,069,684 (-)NCBI
ROS_Cfam_1.0943,728,020 - 43,732,092 (-)NCBI
UMICH_Zoey_3.1942,511,172 - 42,515,249 (-)NCBI
UNSW_CanFamBas_1.0942,803,399 - 42,807,468 (-)NCBI
UU_Cfam_GSD_1.0942,881,697 - 42,885,771 (-)NCBI
Rab34
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560242,045,795 - 42,050,452 (-)NCBI
SpeTri2.0NW_0049365384,923,740 - 4,928,798 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RAB34
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1244,949,892 - 44,956,119 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11244,951,989 - 44,956,458 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21246,936,921 - 46,941,392 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RAB34
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11622,482,012 - 22,486,159 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1622,481,747 - 22,485,186 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660757,637,398 - 7,641,821 (+)NCBIVero_WHO_p1.0
Rab34
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247861,286,886 - 1,291,582 (-)NCBIHetGla_female_1.0hetGla2

Position Markers
AI326479  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381178,192,031 - 78,192,128UniSTSGRCm38
MGSCv371178,005,533 - 78,005,630UniSTSGRCm37
Celera1186,235,489 - 86,235,586UniSTS
Cytogenetic Map11B5UniSTS
cM Map1144.89UniSTS
Whitehead/MRC_RH11982.6UniSTS
D11Seg7  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381178,190,420 - 78,190,555UniSTSGRCm38
MGSCv371178,003,922 - 78,004,057UniSTSGRCm37
Cytogenetic Map11B5UniSTS
cM Map1144.9UniSTS
cM Map1144.89UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4141000Nidd3_mnon-insulin-dependent diabetes mellitus 3 (mouse)Not determined4515120179151308Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114527504680087498Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114629434180294436Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114642858180428696Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15861720487804412Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5882844085175703Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116179599488808902Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116226517996265327Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116342858181939647Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116342858194173092Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116493951098939647Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116493951098939647Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116493951098939647Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166842594100842826Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166842594100842826Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66842594100842826Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166842594100842826Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166842594100842826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166842594100842826Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116718736579923086Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168300000102000000Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170800372104800540Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170800372104800540Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170800372104800540Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170800372104800540Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172128823106128908Mouse
1301078Alcp2_malcohol preference locus 2 (mouse)Not determined117231897084840636Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172835299106835463Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172927789106927907Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172927789106927907Mouse
12903994Opfaq3_mopen field activity QTL 3 (mouse)117384671582178599Mouse
11038695Par8_mpulmonary adenoma resistance 8 (mouse)1177172953111173092Mouse
1301414Heal10_mwound healing/regeneration 10 (mouse)Not determined1177546357111546496Mouse
10045616Heal25_mwound healing/regeneration 25 (mouse)Not determined1177546357111546496Mouse
4141365Ltxs3_mlethal factor toxin susceptibility 3 (mouse)Not determined117768304780855532Mouse
1302124Eae7_msusceptibility to experimental allergic encephalomyelitis 7 (mouse)Not determined117768304799486994Mouse
10413882Moe1_mmodifier of epilepsy 1 (mouse)1177880152111880273Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1396
Count of miRNA genes:444
Interacting mature miRNAs:508
Transcripts:ENSMUST00000002128, ENSMUST00000056241, ENSMUST00000108322, ENSMUST00000126864, ENSMUST00000148603, ENSMUST00000150941, ENSMUST00000154542, ENSMUST00000156435
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001159482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_033475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA041780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB082927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB232630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC004807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF322068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF327929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL591070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV142766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB643883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY195955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY234941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY317641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS033285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S72304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000002128   ⟹   ENSMUSP00000002128
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1178,079,256 - 78,083,014 (+)Ensembl
GRCm38.p6 Ensembl1178,188,430 - 78,192,188 (+)Ensembl
RefSeq Acc Id: ENSMUST00000056241   ⟹   ENSMUSP00000059769
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1178,079,705 - 78,083,011 (+)Ensembl
GRCm38.p6 Ensembl1178,188,879 - 78,192,185 (+)Ensembl
RefSeq Acc Id: ENSMUST00000108322   ⟹   ENSMUSP00000103958
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1178,079,605 - 78,083,014 (+)Ensembl
GRCm38.p6 Ensembl1178,188,779 - 78,192,188 (+)Ensembl
RefSeq Acc Id: ENSMUST00000126864
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1178,080,414 - 78,081,940 (+)Ensembl
GRCm38.p6 Ensembl1178,189,588 - 78,191,114 (+)Ensembl
RefSeq Acc Id: ENSMUST00000148603
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1178,080,066 - 78,081,132 (+)Ensembl
GRCm38.p6 Ensembl1178,189,240 - 78,190,306 (+)Ensembl
RefSeq Acc Id: ENSMUST00000150941   ⟹   ENSMUSP00000123033
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1178,079,266 - 78,082,664 (+)Ensembl
GRCm38.p6 Ensembl1178,188,440 - 78,191,838 (+)Ensembl
RefSeq Acc Id: ENSMUST00000154542
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1178,081,179 - 78,081,759 (+)Ensembl
GRCm38.p6 Ensembl1178,190,353 - 78,190,933 (+)Ensembl
RefSeq Acc Id: ENSMUST00000156435   ⟹   ENSMUSP00000122848
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1178,080,956 - 78,083,019 (+)Ensembl
GRCm38.p6 Ensembl1178,190,130 - 78,192,193 (+)Ensembl
RefSeq Acc Id: ENSMUST00000207728   ⟹   ENSMUSP00000146997
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1178,079,748 - 78,080,961 (+)Ensembl
GRCm38.p6 Ensembl1178,188,922 - 78,190,135 (+)Ensembl
RefSeq Acc Id: NM_001159482   ⟹   NP_001152954
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391178,079,253 - 78,083,019 (+)NCBI
GRCm381178,188,427 - 78,192,193 (+)NCBI
MGSCv371178,001,929 - 78,005,695 (+)RGD
Celera1186,235,424 - 86,236,412 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_033475   ⟹   NP_258436
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391178,079,574 - 78,083,019 (+)NCBI
GRCm381178,188,748 - 78,192,193 (+)NCBI
MGSCv371178,001,929 - 78,005,695 (+)RGD
Celera1186,235,424 - 86,236,412 (-)RGD
cM Map11 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_258436   ⟸   NM_033475
- UniProtKB: Q64008 (UniProtKB/Swiss-Prot),   Q0PD20 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001152954   ⟸   NM_001159482
- UniProtKB: Q64008 (UniProtKB/Swiss-Prot),   Q0PD20 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000123033   ⟸   ENSMUST00000150941
RefSeq Acc Id: ENSMUSP00000103958   ⟸   ENSMUST00000108322
RefSeq Acc Id: ENSMUSP00000059769   ⟸   ENSMUST00000056241
RefSeq Acc Id: ENSMUSP00000002128   ⟸   ENSMUST00000002128
RefSeq Acc Id: ENSMUSP00000146997   ⟸   ENSMUST00000207728
RefSeq Acc Id: ENSMUSP00000122848   ⟸   ENSMUST00000156435

Promoters
RGD ID:6821683
Promoter ID:MM_KWN:8674
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   ES_Cell,   Kidney,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000056241,   ENSMUST00000108323,   NM_001159482,   NM_033475,   OTTMUST00000000325,   OTTMUST00000000326,   OTTMUST00000000327,   OTTMUST00000000328
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361178,001,701 - 78,003,352 (+)MPROMDB
RGD ID:8675690
Promoter ID:EPDNEW_M15876
Type:initiation region
Name:Rab34_1
Description:Mus musculus RAB34, member RAS oncogene family , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15877  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381178,188,466 - 78,188,526EPDNEW
RGD ID:8675692
Promoter ID:EPDNEW_M15877
Type:initiation region
Name:Rab34_2
Description:Mus musculus RAB34, member RAS oncogene family , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15876  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381178,188,765 - 78,188,825EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:104606 AgrOrtholog
Ensembl Genes ENSMUSG00000002059 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000002128 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000059769 UniProtKB/TrEMBL
  ENSMUSP00000103958 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000122848 UniProtKB/TrEMBL
  ENSMUSP00000123033 UniProtKB/TrEMBL
  ENSMUSP00000146997 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000002128 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000056241 UniProtKB/TrEMBL
  ENSMUST00000108322 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000150941 UniProtKB/TrEMBL
  ENSMUST00000156435 UniProtKB/TrEMBL
  ENSMUST00000207728 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Small_GTP-bd_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Small_GTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:19376 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:104606 ENTREZGENE
NCBI Gene 19376 ENTREZGENE
Pfam Ras UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Rab34 PhenoGen
PROSITE RAB UniProtKB/Swiss-Prot
  RAS UniProtKB/TrEMBL
SMART RHO UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs small_GTP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A140LIX7_MOUSE UniProtKB/TrEMBL
  B1AQD3_MOUSE UniProtKB/TrEMBL
  B1AQD4_MOUSE UniProtKB/TrEMBL
  F7BE32_MOUSE UniProtKB/TrEMBL
  Q0PD20 ENTREZGENE, UniProtKB/TrEMBL
  Q64008 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q8BHJ0 UniProtKB/Swiss-Prot
  Q99P59 UniProtKB/Swiss-Prot
  Q99P90 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-04-30 Rab34  RAB34, member RAS oncogene family    RAB34, member of RAS oncogene family  Symbol and/or name change 5135510 APPROVED