Sarm1 (sterile alpha and HEAT/Armadillo motif containing 1) - Rat Genome Database
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Gene: Sarm1 (sterile alpha and HEAT/Armadillo motif containing 1) Mus musculus
Analyze
Symbol: Sarm1
Name: sterile alpha and HEAT/Armadillo motif containing 1
RGD ID: 1320777
MGI Page MGI
Description: Exhibits NAD+ nucleosidase activity. Involved in several processes, including NAD catabolic process; regulation of dendrite morphogenesis; and response to glucose. Localizes to several cellular components, including dendrite; extrinsic component of mitochondrial outer membrane; and microtubule. Is expressed in immune system; nervous system; neural retina; and tongue. Orthologous to human SARM1 (sterile alpha and TIR motif containing 1); INTERACTS WITH 1,2-dichloroethane; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: A830091I15Rik; C78606; MyD885; NAD(+) hydrolase SARM1; NADase SARM1; NADP(+) hydrolase SARM1; Sarm; sterile alpha and TIR motif containing 1; sterile alpha and TIR motif-containing protein 1; Tir-1 homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391178,361,099 - 78,388,642 (-)NCBIGRCm39mm39
GRCm39 Ensembl1178,363,156 - 78,388,580 (-)Ensembl
GRCm381178,470,273 - 78,497,816 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1178,472,330 - 78,497,754 (-)EnsemblGRCm38mm10GRCm38
MGSCv371178,285,832 - 78,311,256 (-)NCBIGRCm37mm9NCBIm37
MGSCv361178,289,486 - 78,313,898 (-)NCBImm8
Celera1188,104,406 - 88,129,827 (-)NCBICelera
Cytogenetic Map11B5NCBI
cM Map1146.74NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11386760   PMID:12477932   PMID:15368895   PMID:15489334   PMID:16141072   PMID:16141073  
PMID:17724133   PMID:17804407   PMID:18287559   PMID:19587044   PMID:21267068   PMID:21555400   PMID:21555464   PMID:21677750   PMID:21873635   PMID:21903422   PMID:22145856   PMID:22678360  
PMID:23175186   PMID:23499490   PMID:23518770   PMID:23749635   PMID:23751821   PMID:23836818   PMID:23946415   PMID:24321214   PMID:24478430   PMID:24711619   PMID:25009267   PMID:25652021  
PMID:25818290   PMID:25908823   PMID:26423149   PMID:26912636   PMID:27590237   PMID:27671644   PMID:27735788   PMID:27797810   PMID:28095293   PMID:28334607   PMID:28485482   PMID:28889202  
PMID:28978465   PMID:29454967   PMID:29459677   PMID:29526794   PMID:29567804   PMID:30010873   PMID:30191480   PMID:30484118   PMID:30642945   PMID:30842236   PMID:31076360   PMID:31439642  
PMID:31445042   PMID:31484833   PMID:31530804   PMID:31661035   PMID:31696428   PMID:31729371   PMID:31740269   PMID:31962129   PMID:32069324   PMID:32087251   PMID:32268088   PMID:32312889  
PMID:32584865   PMID:32609299   PMID:32963272   PMID:33053563   PMID:33107823  


Genomics

Comparative Map Data
Sarm1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391178,361,099 - 78,388,642 (-)NCBIGRCm39mm39
GRCm39 Ensembl1178,363,156 - 78,388,580 (-)Ensembl
GRCm381178,470,273 - 78,497,816 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1178,472,330 - 78,497,754 (-)EnsemblGRCm38mm10GRCm38
MGSCv371178,285,832 - 78,311,256 (-)NCBIGRCm37mm9NCBIm37
MGSCv361178,289,486 - 78,313,898 (-)NCBImm8
Celera1188,104,406 - 88,129,827 (-)NCBICelera
Cytogenetic Map11B5NCBI
cM Map1146.74NCBI
SARM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1728,364,356 - 28,404,049 (+)EnsemblGRCh38hg38GRCh38
GRCh381728,371,694 - 28,404,049 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371726,698,715 - 26,731,067 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361723,723,114 - 23,752,192 (+)NCBINCBI36hg18NCBI36
Build 341723,723,252 - 23,752,192NCBI
Celera1723,560,746 - 23,589,829 (+)NCBI
Cytogenetic Map17q11.2NCBI
HuRef1722,907,093 - 22,936,406 (+)NCBIHuRef
CHM1_11726,761,617 - 26,790,977 (+)NCBICHM1_1
Sarm1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21063,369,456 - 63,393,016 (-)NCBI
Rnor_6.0 Ensembl1065,742,343 - 65,766,050 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01065,742,343 - 65,766,050 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01065,877,570 - 65,901,277 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41064,584,020 - 64,607,332 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11064,597,723 - 64,621,104 (-)NCBI
Celera1062,346,027 - 62,369,397 (-)NCBICelera
Cytogenetic Map10q25NCBI
Sarm1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554814,743,458 - 4,763,766 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554814,743,458 - 4,763,766 (-)NCBIChiLan1.0ChiLan1.0
SARM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11728,878,498 - 28,905,363 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1728,878,498 - 28,905,363 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01728,370,206 - 28,403,440 (-)NCBIMhudiblu_PPA_v0panPan3
SARM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1942,620,878 - 42,639,662 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl942,622,538 - 42,639,590 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha941,779,152 - 41,803,421 (+)NCBI
ROS_Cfam_1.0943,441,401 - 43,465,669 (+)NCBI
UMICH_Zoey_3.1942,225,631 - 42,247,631 (+)NCBI
UNSW_CanFamBas_1.0942,516,850 - 42,540,910 (+)NCBI
UU_Cfam_GSD_1.0942,593,916 - 42,618,176 (+)NCBI
Sarm1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_ltri_2NW_02440560241,648,738 - 41,672,956 (+)NCBI
SpeTri2.0NW_0049365384,526,713 - 4,546,861 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SARM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1244,655,811 - 44,676,945 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11244,654,364 - 44,676,942 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2189,957 - 32,701 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SARM1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11622,137,990 - 22,163,431 (+)NCBI
ChlSab1.1 Ensembl1622,138,588 - 22,162,893 (+)Ensembl
Sarm1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624786974,785 - 1,001,810 (+)NCBI

Position Markers
Sarm1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381178,483,205 - 78,483,267UniSTSGRCm38
MGSCv371178,296,707 - 78,296,769UniSTSGRCm37
Celera1188,115,279 - 88,115,341UniSTS
Cytogenetic Map11B5UniSTS
cM Map1145.0UniSTS
RH126402  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381178,473,304 - 78,473,503UniSTSGRCm38
MGSCv371178,286,806 - 78,287,005UniSTSGRCm37
Celera1188,105,380 - 88,105,579UniSTS
Cytogenetic Map11B5UniSTS
cM Map1145.0UniSTS
Whitehead/MRC_RH11998.99UniSTS
D11Bhm154  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381178,472,269 - 78,472,390UniSTSGRCm38
MGSCv371178,285,771 - 78,285,892UniSTSGRCm37
Celera1188,104,345 - 88,104,466UniSTS
Cytogenetic Map11B5UniSTS
cM Map1145.09UniSTS
D11Bhm155  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381178,472,274 - 78,472,371UniSTSGRCm38
MGSCv371178,285,776 - 78,285,873UniSTSGRCm37
Celera1188,104,350 - 88,104,447UniSTS
Cytogenetic Map11B5UniSTS
cM Map1145.09UniSTS
D11Bhm156  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381178,481,223 - 78,481,322UniSTSGRCm38
MGSCv371178,294,725 - 78,294,824UniSTSGRCm37
Celera1188,113,297 - 88,113,396UniSTS
Cytogenetic Map11B5UniSTS
cM Map1145.09UniSTS
D11Bhm57  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381178,482,150 - 78,482,322UniSTSGRCm38
MGSCv371178,295,652 - 78,295,824UniSTSGRCm37
Celera1188,114,224 - 88,114,396UniSTS
Cytogenetic Map11B5UniSTS
cM Map1145.1UniSTS
D11Bhm58  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381178,485,079 - 78,485,266UniSTSGRCm38
MGSCv371178,298,581 - 78,298,768UniSTSGRCm37
Celera1188,117,153 - 88,117,340UniSTS
Cytogenetic Map11B5UniSTS
cM Map1145.12UniSTS
D11Seg31  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381178,487,024 - 78,487,340UniSTSGRCm38
MGSCv371178,300,526 - 78,300,842UniSTSGRCm37
Celera1188,119,098 - 88,119,414UniSTS
Cytogenetic Map11B5UniSTS
cM Map1145.08UniSTS
cM Map11 UniSTS
D11Seg32  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381178,481,161 - 78,481,340UniSTSGRCm38
MGSCv371178,294,663 - 78,294,842UniSTSGRCm37
Celera1188,113,235 - 88,113,414UniSTS
Cytogenetic Map11B5UniSTS
cM Map1145.09UniSTS
D11Seg34  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381178,497,568 - 78,497,690UniSTSGRCm38
MGSCv371178,311,070 - 78,311,192UniSTSGRCm37
Celera1188,129,641 - 88,129,763UniSTS
Cytogenetic Map11B5UniSTS
cM Map1145.09UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4141000Nidd3_mnon-insulin-dependent diabetes mellitus 3 (mouse)Not determined4515120179151308Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114527504680087498Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114629434180294436Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114642858180428696Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15861720487804412Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5882844085175703Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116179599488808902Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116226517996265327Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116342858181939647Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116342858194173092Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116493951098939647Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116493951098939647Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116493951098939647Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166842594100842826Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166842594100842826Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66842594100842826Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166842594100842826Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166842594100842826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166842594100842826Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116718736579923086Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168300000102000000Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170800372104800540Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170800372104800540Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170800372104800540Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170800372104800540Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172128823106128908Mouse
1301078Alcp2_malcohol preference locus 2 (mouse)Not determined117231897084840636Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172835299106835463Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172927789106927907Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172927789106927907Mouse
12903994Opfaq3_mopen field activity QTL 3 (mouse)117384671582178599Mouse
11038695Par8_mpulmonary adenoma resistance 8 (mouse)1177172953111173092Mouse
1301414Heal10_mwound healing/regeneration 10 (mouse)Not determined1177546357111546496Mouse
10045616Heal25_mwound healing/regeneration 25 (mouse)Not determined1177546357111546496Mouse
4141365Ltxs3_mlethal factor toxin susceptibility 3 (mouse)Not determined117768304780855532Mouse
1302124Eae7_msusceptibility to experimental allergic encephalomyelitis 7 (mouse)Not determined117768304799486994Mouse
10413882Moe1_mmodifier of epilepsy 1 (mouse)1177880152111880273Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2822
Count of miRNA genes:759
Interacting mature miRNAs:1005
Transcripts:ENSMUST00000061174, ENSMUST00000108287, ENSMUST00000130955, ENSMUST00000153534, ENSMUST00000170674
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000061174   ⟹   ENSMUSP00000051059
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1178,473,291 - 78,497,754 (-)Ensembl
RefSeq Acc Id: ENSMUST00000108287   ⟹   ENSMUSP00000103922
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1178,472,330 - 78,497,458 (-)Ensembl
RefSeq Acc Id: ENSMUST00000130955
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1178,490,955 - 78,497,686 (-)Ensembl
RefSeq Acc Id: ENSMUST00000153534
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1178,473,213 - 78,483,798 (-)Ensembl
RefSeq Acc Id: ENSMUST00000170674
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1178,482,834 - 78,487,295 (-)Ensembl
RefSeq Acc Id: NM_001168521   ⟹   NP_001161993
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391178,363,156 - 78,388,580 (-)NCBI
GRCm381178,472,330 - 78,497,754 (-)NCBI
Celera1188,104,406 - 88,129,827 (-)NCBI
Sequence:
RefSeq Acc Id: NM_172795   ⟹   NP_766383
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391178,363,156 - 78,388,580 (-)NCBI
GRCm381178,472,330 - 78,497,754 (-)NCBI
Celera1188,104,406 - 88,129,827 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001780001
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391178,361,099 - 78,388,642 (-)NCBI
GRCm381178,470,273 - 78,497,816 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_766383   ⟸   NM_172795
- Peptide Label: isoform 2
- UniProtKB: Q6PDS3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001161993   ⟸   NM_001168521
- Peptide Label: isoform 1
- UniProtKB: Q6PDS3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000103922   ⟸   ENSMUST00000108287
RefSeq Acc Id: ENSMUSP00000051059   ⟸   ENSMUST00000061174
Protein Domains
SAM   TIR

Promoters
RGD ID:6822026
Promoter ID:MM_KWN:8715
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:OTTMUST00000000469
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361178,296,981 - 78,297,481 (-)MPROMDB
RGD ID:6822025
Promoter ID:MM_KWN:8716
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   Brain,   Liver,   MEF_B6
Transcripts:NM_001168521,   NM_172795,   NM_172795_SARM1,   OTTMUST00000000470
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361178,311,144 - 78,311,644 (-)MPROMDB
RGD ID:8675726
Promoter ID:EPDNEW_M15894
Type:initiation region
Name:Sarm1_1
Description:Mus musculus sterile alpha and HEAT/Armadillo motif containing1 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381178,497,725 - 78,497,785EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2136419 AgrOrtholog
Ensembl Genes ENSMUSG00000050132 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000051059 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000103922 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000061174 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000108287 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.150.50 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.25.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.50.10140 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM/pointed_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SARM1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TIR_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Toll_tir_struct_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:237868 UniProtKB/Swiss-Prot
MGD MGI:2136419 ENTREZGENE
NCBI Gene 237868 ENTREZGENE
PANTHER PTHR22998 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam SAM_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TIR_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Sarm1 PhenoGen
PROSITE SAM_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TIR UniProtKB/Swiss-Prot
SMART SAM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TIR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47769 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48371 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF52200 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0PJL3_MOUSE UniProtKB/TrEMBL
  Q6PDS3 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q5SYG5 UniProtKB/Swiss-Prot
  Q5SYG6 UniProtKB/Swiss-Prot
  Q6A054 UniProtKB/Swiss-Prot
  Q6SZW0 UniProtKB/Swiss-Prot
  Q8BRI9 UniProtKB/Swiss-Prot