Ssh2 (slingshot protein phosphatase 2) - Rat Genome Database
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Gene: Ssh2 (slingshot protein phosphatase 2) Mus musculus
Analyze
Symbol: Ssh2
Name: slingshot protein phosphatase 2
RGD ID: 1558272
MGI Page MGI
Description: Predicted to have actin binding activity and phosphoprotein phosphatase activity. Predicted to be involved in several processes, including negative regulation of actin filament polymerization; positive regulation of cell migration; and protein dephosphorylation. Predicted to localize to cytoplasm. Is expressed in several structures, including genitourinary system; hemolymphoid system; liver; nervous system; and neural retinal epithelium. Orthologous to human SSH2 (slingshot protein phosphatase 2); INTERACTS WITH 1,2-dichloroethane; 2,3',4,4',5-Pentachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: BB104748; BC030940; mSSH-2L; protein phosphatase Slingshot homolog 2; slingshot 2L; slingshot homolog 2; slingshot homolog 2 (Drosophila); slingshot-like 2; SSH; SSH-2; SSH-2L; SSH-like protein 2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391177,107,020 - 77,351,046 (+)NCBIGRCm39mm39
GRCm39 Ensembl1177,107,113 - 77,351,046 (+)Ensembl
GRCm381177,216,157 - 77,460,220 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1177,216,287 - 77,460,220 (+)EnsemblGRCm38mm10GRCm38
MGSCv371177,029,927 - 77,269,050 (+)NCBIGRCm37mm9NCBIm37
MGSCv361177,032,620 - 77,271,743 (+)NCBImm8
Celera1184,715,068 - 84,954,113 (+)NCBICelera
Cytogenetic Map11B5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:12520002   PMID:14531860   PMID:14610273   PMID:15345747   PMID:15368895   PMID:16141072   PMID:16141073  
PMID:18442045   PMID:21267068   PMID:21873635   PMID:22172670   PMID:28671696  


Genomics

Comparative Map Data
Ssh2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391177,107,020 - 77,351,046 (+)NCBIGRCm39mm39
GRCm39 Ensembl1177,107,113 - 77,351,046 (+)Ensembl
GRCm381177,216,157 - 77,460,220 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1177,216,287 - 77,460,220 (+)EnsemblGRCm38mm10GRCm38
MGSCv371177,029,927 - 77,269,050 (+)NCBIGRCm37mm9NCBIm37
MGSCv361177,032,620 - 77,271,743 (+)NCBImm8
Celera1184,715,068 - 84,954,113 (+)NCBICelera
Cytogenetic Map11B5NCBI
SSH2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1729,625,938 - 29,930,276 (-)EnsemblGRCh38hg38GRCh38
GRCh381729,625,938 - 29,930,239 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371727,952,956 - 28,257,246 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361724,977,091 - 25,281,144 (-)NCBINCBI36hg18NCBI36
Build 341724,977,090 - 25,281,144NCBI
Celera1724,813,835 - 25,116,991 (-)NCBI
Cytogenetic Map17q11.2NCBI
HuRef1724,162,366 - 24,466,605 (-)NCBIHuRef
CHM1_11728,015,428 - 28,319,716 (-)NCBICHM1_1
Ssh2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21062,057,400 - 62,309,328 (+)NCBI
Rnor_6.0 Ensembl1062,705,051 - 62,814,520 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01062,702,286 - 62,954,907 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01062,399,739 - 62,652,214 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41066,659,774 - 66,721,700 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11066,674,931 - 66,739,136 (-)NCBI
Celera1061,203,749 - 61,310,006 (+)NCBICelera
Cytogenetic Map10q24NCBI
Ssh2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554813,380,213 - 3,633,074 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554813,380,212 - 3,633,074 (+)NCBIChiLan1.0ChiLan1.0
SSH2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11727,363,861 - 27,665,630 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1727,363,861 - 27,665,630 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01726,845,369 - 27,148,615 (+)NCBIMhudiblu_PPA_v0panPan3
SSH2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1943,726,726 - 43,907,199 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl943,731,635 - 43,907,220 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha942,879,709 - 43,118,190 (-)NCBI
ROS_Cfam_1.0944,542,580 - 44,781,109 (-)NCBI
UMICH_Zoey_3.1943,327,152 - 43,565,592 (-)NCBI
UNSW_CanFamBas_1.0943,617,598 - 43,856,553 (-)NCBI
UU_Cfam_GSD_1.0943,697,972 - 43,936,580 (-)NCBI
Ssh2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_ltri_2NW_02440560242,857,854 - 43,112,560 (-)NCBI
SpeTri2.0NW_0049365385,735,806 - 5,990,480 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SSH2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11245,818,103 - 46,085,720 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21248,414,412 - 48,468,229 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SSH2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11623,369,123 - 23,667,258 (-)NCBI
ChlSab1.1 Ensembl1623,370,701 - 23,503,161 (-)Ensembl
Ssh2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247862,121,036 - 2,438,846 (-)NCBI

Position Markers
BB104748  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381177,457,226 - 77,457,374UniSTSGRCm38
MGSCv371177,270,728 - 77,270,876UniSTSGRCm37
Celera1184,955,791 - 84,955,939UniSTS
Cytogenetic Map11B5UniSTS
Whitehead/MRC_RH11968.95UniSTS
D10Jhu79  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381177,363,278 - 77,363,382UniSTSGRCm38
MGSCv371177,176,780 - 77,176,884UniSTSGRCm37
Celera1184,861,843 - 84,861,947UniSTS
Cytogenetic Map11B5UniSTS
cM Map10 UniSTS
RH144579  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381177,245,398 - 77,245,611UniSTSGRCm38
MGSCv371177,058,900 - 77,059,113UniSTSGRCm37
Celera1184,744,045 - 84,744,258UniSTS
Cytogenetic Map11B5UniSTS
D9S173  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381177,311,225 - 77,312,193UniSTSGRCm38
MGSCv371177,124,727 - 77,125,695UniSTSGRCm37
Celera1184,809,872 - 84,810,840UniSTS
Cytogenetic Map11B5UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4141000Nidd3_mnon-insulin-dependent diabetes mellitus 3 (mouse)Not determined4515120179151308Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114527504680087498Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114629434180294436Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114642858180428696Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15861720487804412Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5882844085175703Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116179599488808902Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116226517996265327Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116342858181939647Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116342858194173092Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116493951098939647Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116493951098939647Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116493951098939647Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166842594100842826Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166842594100842826Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66842594100842826Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166842594100842826Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166842594100842826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166842594100842826Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116718736579923086Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168300000102000000Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170800372104800540Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170800372104800540Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170800372104800540Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170800372104800540Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172128823106128908Mouse
1301078Alcp2_malcohol preference locus 2 (mouse)Not determined117231897084840636Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172835299106835463Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172927789106927907Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172927789106927907Mouse
12903994Opfaq3_mopen field activity QTL 3 (mouse)117384671582178599Mouse
11038695Par8_mpulmonary adenoma resistance 8 (mouse)1177172953111173092Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2285
Count of miRNA genes:835
Interacting mature miRNAs:1125
Transcripts:ENSMUST00000037912, ENSMUST00000127890, ENSMUST00000156488, ENSMUST00000180394, ENSMUST00000180545, ENSMUST00000180554, ENSMUST00000181283
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001291190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_177710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB099288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK173243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL606724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL607072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL663066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC030940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC141392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC141393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000037912   ⟹   ENSMUSP00000042625
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1177,216,287 - 77,460,220 (+)Ensembl
RefSeq Acc Id: ENSMUST00000127890
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1177,348,280 - 77,413,635 (+)Ensembl
RefSeq Acc Id: ENSMUST00000156488   ⟹   ENSMUSP00000119681
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1177,216,287 - 77,393,153 (+)Ensembl
RefSeq Acc Id: ENSMUST00000180394
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1177,346,743 - 77,350,188 (+)Ensembl
RefSeq Acc Id: ENSMUST00000180545
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1177,391,437 - 77,394,003 (+)Ensembl
RefSeq Acc Id: ENSMUST00000180554
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1177,348,288 - 77,432,157 (+)Ensembl
RefSeq Acc Id: ENSMUST00000181283   ⟹   ENSMUSP00000137933
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1177,348,282 - 77,455,521 (+)Ensembl
RefSeq Acc Id: NM_001291190   ⟹   NP_001278119
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,239,106 - 77,351,046 (+)NCBI
GRCm381177,348,280 - 77,460,220 (+)NCBI
Celera1184,715,068 - 84,958,785 (+)NCBI
Sequence:
RefSeq Acc Id: NM_177710   ⟹   NP_808378
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,107,251 - 77,351,046 (+)NCBI
GRCm381177,216,425 - 77,460,220 (+)NCBI
MGSCv371177,029,927 - 77,269,050 (+)RGD
Celera1184,715,068 - 84,958,785 (+)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006533227   ⟹   XP_006533290
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,107,020 - 77,351,046 (+)NCBI
GRCm381177,216,157 - 77,460,220 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006533228   ⟹   XP_006533291
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,107,259 - 77,351,046 (+)NCBI
GRCm381177,216,435 - 77,460,220 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006533229   ⟹   XP_006533292
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,221,137 - 77,351,046 (+)NCBI
GRCm381177,340,039 - 77,460,220 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030245966   ⟹   XP_030101826
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,107,055 - 77,351,046 (+)NCBI
GRCm381177,216,269 - 77,460,220 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036156660   ⟹   XP_036012553
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,107,259 - 77,351,046 (+)NCBI
RefSeq Acc Id: XM_036156661   ⟹   XP_036012554
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,221,137 - 77,351,046 (+)NCBI
RefSeq Acc Id: XM_036156662   ⟹   XP_036012555
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391177,107,049 - 77,351,046 (+)NCBI
Reference Sequences
RefSeq Acc Id: NP_808378   ⟸   NM_177710
- Peptide Label: isoform 1
- UniProtKB: Q5SW75 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006533291   ⟸   XM_006533228
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006533290   ⟸   XM_006533227
- Peptide Label: isoform X1
- UniProtKB: Q5SW75 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006533292   ⟸   XM_006533229
- Peptide Label: isoform X3
- UniProtKB: Q5SW75 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001278119   ⟸   NM_001291190
- Peptide Label: isoform 2
- UniProtKB: Q5SW75 (UniProtKB/Swiss-Prot),   A0A0R4J2A0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030101826   ⟸   XM_030245966
- Peptide Label: isoform X4
RefSeq Acc Id: ENSMUSP00000137933   ⟸   ENSMUST00000181283
RefSeq Acc Id: ENSMUSP00000119681   ⟸   ENSMUST00000156488
RefSeq Acc Id: ENSMUSP00000042625   ⟸   ENSMUST00000037912
RefSeq Acc Id: XP_036012555   ⟸   XM_036156662
- Peptide Label: isoform X7
RefSeq Acc Id: XP_036012553   ⟸   XM_036156660
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036012554   ⟸   XM_036156661
- Peptide Label: isoform X6
Protein Domains
TYR_PHOSPHATASE_2   Tyrosine-protein phosphatase

Promoters
RGD ID:6822233
Promoter ID:MM_KWN:8596
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Lung,   Spleen
Transcripts:ENSMUST00000108397,   OTTMUST00000014111,   OTTMUST00000014113
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361177,029,546 - 77,030,046 (+)MPROMDB
RGD ID:6822259
Promoter ID:MM_KWN:8599
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:ENSMUST00000108396,   OTTMUST00000014112,   UC007KGN.1,   UC007KGO.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361177,161,591 - 77,162,091 (+)MPROMDB
RGD ID:8675628
Promoter ID:EPDNEW_M15844
Type:multiple initiation site
Name:Ssh2_1
Description:Mus musculus slingshot protein phosphatase 2 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381177,348,280 - 77,348,340EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2679255 AgrOrtholog
Ensembl Genes ENSMUSG00000037926 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000042625 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000119681 UniProtKB/TrEMBL
  ENSMUSP00000137933 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000037912 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000156488 UniProtKB/TrEMBL
  ENSMUST00000181283 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 3.90.190.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro DEK_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Dual-sp_phosphatase_cat-dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Phosphatase_SSH-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot-tyrosine_phosphatase-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSH-N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_Pase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TYR_PHOSPHATASE_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TYR_PHOSPHATASE_DUAL_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:237860 UniProtKB/Swiss-Prot
MGD MGI:2679255 ENTREZGENE
NCBI Gene 237860 ENTREZGENE
PANTHER PTHR45864 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DEK_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DSPc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ssh2 PhenoGen
PROSITE TYR_PHOSPHATASE_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TYR_PHOSPHATASE_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TYR_PHOSPHATASE_DUAL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART DSPc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52799 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0A0MQJ2_MOUSE UniProtKB/TrEMBL
  A0A0R4J2A0 ENTREZGENE, UniProtKB/TrEMBL
  Q3U4V2_MOUSE UniProtKB/TrEMBL
  Q5SW75 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary B9EJ94 UniProtKB/Swiss-Prot
  Q3TDK8 UniProtKB/Swiss-Prot
  Q3TYP8 UniProtKB/Swiss-Prot
  Q3U2K3 UniProtKB/Swiss-Prot
  Q5F268 UniProtKB/Swiss-Prot
  Q5SW74 UniProtKB/Swiss-Prot
  Q69ZC3 UniProtKB/Swiss-Prot
  Q76I78 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-10-24 Ssh2  slingshot protein phosphatase 2    slingshot homolog 2 (Drosophila)  Symbol and/or name change 5135510 APPROVED