Skts2_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Skts2_m (skin tumor susceptibility 2 (mouse)) Mus musculus

Symbol: Skts2_m
Name: skin tumor susceptibility 2 (mouse)
RGD ID: 1300747
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm397112,922,733 - 144,995,196MOUSEQTLGRCm39
GRCm387113,321,003 - 145,441,459MOUSEQTLGRCm38
MGSCv377120,464,517 - 152,509,964 (+)MOUSEQTLGRCm37
MGSCv3739,315,661 - 75,315,661RGD
cM Map773.19MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Skts2_mMouseincreased skin tumor incidence  IAGP 5509061 MGIPMID:7670492
Skts2_mMouseintegument phenotype  IEA 704405Created by mouse qtl pipelineMGIPMID:7670492
Skts2_mMouseneoplasm  IEA 704405Created by mouse qtl pipelineMGIPMID:7670492

#
Reference Title
Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
PMID:7670492  



1 to 20 of 1396 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1614346Btbd10BTB domain containing 107112914838112970734Mouse
401840869LOC132412335STARR-positive B cell enhancer ABC_E37447112968423112968724Mouse
401838569LOC132412336STARR-positive B cell enhancer ABC_E92977112977179112977479Mouse
11186Pthparathyroid hormone7112984783112987879Mouse
401710706LOC131373757STARR-seq mESC enhancer starr_199097113029304113030549Mouse
5142775Gm18780predicted gene, 187807113047547113048127Mouse
401841148LOC132412337STARR-positive B cell enhancer mm9_chr7:120611773-1206120737113067466113067766Mouse
401717297LOC131373758STARR-seq mESC enhancer starr_199117113089722113092376Mouse
163667068LOC128925782STARR-positive B cell enhancer ABC_E13557113112757113113058Mouse
1558194Far1fatty acyl CoA reductase 17113113008113170713Mouse
1612312Far1osfatty acyl CoA reductase 1, opposite strand7113137233113164194Mouse
401833594LOC132412338STARR-positive B cell enhancer ABC_E104657113152287113152587Mouse
9607149Gm33828predicted gene, 338287113191980113193113Mouse
401716964LOC131373759STARR-seq mESC enhancer starr_199137113249242113250563Mouse
401700816LOC131373760STARR-seq mESC enhancer starr_199157113253388113255028Mouse
10030783Gm39072predicted gene, 390727113268833113283872Mouse
1623561Gm5600predicted gene 56007113305331113310238Mouse
1331873Spon1spondin 1, (f-spondin) extracellular matrix protein7113365235113642610Mouse
401705164LOC131373761STARR-seq mESC enhancer starr_199217113510783113513079Mouse
401701224LOC131373762STARR-seq mESC enhancer starr_199227113545044113546145Mouse

1 to 20 of 1396 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match

1 to 10 of 81 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357460Vtbt4_mvertebral trabecular bone trait 4 (mouse)Not determined7101693381135693530Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
38501066Tip2_mtuberculosis immunophenotype 2, spleen CFU (mouse)7124299223126899172Mouse
27226781Tibl3_mtibia length 3, 5 week (mouse)774849748122199223Mouse
1302032Alcp12_malcohol preference locus 12 (mouse)Not determined7111166122144995196Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
1301781Capsq3_mcapsaicin sensitivity related QTL 3 (mouse)Not determined787143137119485380Mouse
11039524Tbbr3_mTrypanosoma brucei brucei response 3 (mouse)7100750722134750843Mouse
14746988Manh63_mmandible shape 63 (mouse)7127735437144995196Mouse
27226769Tibl12_mtibia length 12, 10 week (mouse)787249208126499172Mouse

1 to 10 of 81 rows


Database
Acc Id
Source(s)
MGD MGI:104787

Note Type Note Reference