Ikzf5 (IKAROS family zinc finger 5) - Rat Genome Database

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Gene: Ikzf5 (IKAROS family zinc finger 5) Mus musculus
Analyze
Symbol: Ikzf5
Name: IKAROS family zinc finger 5
RGD ID: 1322165
MGI Page MGI
Description: Predicted to enable several functions, including DNA-binding transcription repressor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of protein-containing complex. Is expressed in several structures, including adipose tissue; alimentary system; genitourinary system; immune system; and nervous system. Human ortholog(s) of this gene implicated in thrombocytopenia. Orthologous to human IKZF5 (IKAROS family zinc finger 5).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2610034F18Rik; ikaros family zinc finger protein 5; MGC106439; Pegasus; Zfpn; Zfpn1a5; zinc finger protein Pegasus; zinc finger protein, subfamily 1A, 5
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm10356   Gm18393  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397130,990,378 - 131,012,243 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7130,990,381 - 131,012,250 (-)EnsemblGRCm39 Ensembl
GRCm387131,388,649 - 131,410,518 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7131,388,652 - 131,410,521 (-)EnsemblGRCm38mm10GRCm38
MGSCv377138,532,163 - 138,553,992 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367131,179,797 - 131,201,626 (-)NCBIMGSCv36mm8
Celera7131,199,793 - 131,221,622 (-)NCBICelera
Cytogenetic Map7F3NCBI
cM Map773.98NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (ISO,ISS)
protein-containing complex  (IEA,ISO)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:15328020   PMID:15618518   PMID:16141072   PMID:16141073   PMID:18287559   PMID:18940586   PMID:20412781   PMID:21267068  
PMID:21677750   PMID:21873635   PMID:22638570   PMID:23382203   PMID:24194600   PMID:27626380   PMID:28289129   PMID:29799838   PMID:30418981   PMID:30595499   PMID:33540482   PMID:38355793  


Genomics

Comparative Map Data
Ikzf5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397130,990,378 - 131,012,243 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7130,990,381 - 131,012,250 (-)EnsemblGRCm39 Ensembl
GRCm387131,388,649 - 131,410,518 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7131,388,652 - 131,410,521 (-)EnsemblGRCm38mm10GRCm38
MGSCv377138,532,163 - 138,553,992 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367131,179,797 - 131,201,626 (-)NCBIMGSCv36mm8
Celera7131,199,793 - 131,221,622 (-)NCBICelera
Cytogenetic Map7F3NCBI
cM Map773.98NCBI
IKZF5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810122,990,806 - 123,008,795 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10122,990,807 - 123,008,812 (-)EnsemblGRCh38hg38GRCh38
GRCh3710124,750,322 - 124,768,311 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3610124,743,187 - 124,758,301 (-)NCBINCBI36Build 36hg18NCBI36
Build 3410124,741,954 - 124,758,311NCBI
Celera10118,459,665 - 118,474,783 (-)NCBICelera
Cytogenetic Map10q26.13NCBI
HuRef10118,368,066 - 118,386,114 (-)NCBIHuRef
CHM1_110125,032,052 - 125,050,096 (-)NCBICHM1_1
T2T-CHM13v2.010123,865,801 - 123,883,913 (-)NCBIT2T-CHM13v2.0
Ikzf5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81195,599,287 - 195,619,024 (-)NCBIGRCr8
mRatBN7.21186,169,108 - 186,188,847 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1186,170,788 - 186,188,834 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1194,520,938 - 194,538,984 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01201,698,336 - 201,716,382 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01194,370,222 - 194,388,268 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01201,961,524 - 201,981,250 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1201,963,204 - 201,981,250 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01208,993,755 - 209,013,481 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41190,969,408 - 190,987,454 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11191,120,488 - 191,124,960 (-)NCBI
Celera1183,925,543 - 183,943,589 (-)NCBICelera
Cytogenetic Map1q41NCBI
Ikzf5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554771,160,183 - 1,177,616 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554771,160,183 - 1,177,597 (-)NCBIChiLan1.0ChiLan1.0
IKZF5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28134,834,733 - 134,852,771 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110134,840,078 - 134,858,097 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v010119,547,766 - 119,565,804 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.110123,821,461 - 123,839,499 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10123,821,461 - 123,839,499 (-)Ensemblpanpan1.1panPan2
IKZF5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12832,547,300 - 32,564,471 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2832,550,437 - 32,562,804 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2832,613,044 - 32,630,190 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02833,103,797 - 33,121,186 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2833,103,827 - 33,121,242 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12832,661,064 - 32,678,232 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02832,653,234 - 32,670,616 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02832,902,965 - 32,920,326 (-)NCBIUU_Cfam_GSD_1.0
Ikzf5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721313,893,300 - 13,909,468 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648611,650,306 - 11,668,285 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648611,652,234 - 11,667,972 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IKZF5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14132,544,591 - 132,563,124 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114132,544,592 - 132,563,250 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214144,131,151 - 144,149,381 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IKZF5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.19115,665,333 - 115,684,162 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl9115,665,332 - 115,684,169 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604876,974,238 - 76,992,799 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ikzf5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473723,999,688 - 24,016,903 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ikzf5
739 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2799
Count of miRNA genes:794
Interacting mature miRNAs:1060
Transcripts:ENSMUST00000046306, ENSMUST00000121033, ENSMUST00000128432, ENSMUST00000142349, ENSMUST00000154602
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357460Vtbt4_mvertebral trabecular bone trait 4 (mouse)Not determined7101693381135693530Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
11059562Lmr21b_mleishmaniasis resistance 21b (mouse)7110967235144967336Mouse
1302032Alcp12_malcohol preference locus 12 (mouse)Not determined7111166122144995196Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
1301590Pbwg3_mpostnatal body weight growth 3 (mouse)Not determined7127311241144995196Mouse
1300566Sluc8_msusceptibility to lung cancer 8 (mouse)Not determined7127398151144995196Mouse
11039524Tbbr3_mTrypanosoma brucei brucei response 3 (mouse)7100750722134750843Mouse
14746988Manh63_mmandible shape 63 (mouse)7127735437144995196Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
4142444Femwf5_mfemur work to failure 5 (mouse)Not determined112552248144995196Mouse
1301447Fembm3_mfemoral bone morphometry 3 (mouse)Not determined7100993261134993342Mouse
10412104Tons2_mtongue size 2 (mouse)Not determined799837716133837716Mouse
1300677Bmd9_mbone mineral density 9 (mouse)Not determined7116634089144995196Mouse
4142312Nilac4_mnicotine induced locomotor activity 4 (mouse)Not determined7102485219136485380Mouse
1300747Skts2_mskin tumor susceptibility 2 (mouse)Not determined7112922733144995196Mouse
1301898Alcp14_malcohol preference locus 14 (mouse)Not determined7111166122144995196Mouse
1357711Adbg1_madult body growth 1 (mouse)Not determined7118693381144398314Mouse
1301903Tlsm1_mthymic lymphoma susceptible 1 (mouse)Not determined7122250663135170901Mouse
10402499Lmr21_mleishmaniasis resistance 21 (mouse)Not determined7110967235144967336Mouse
1301773Stheal7_msoft tissue heal 7 (mouse)Not determined7119132573144995196Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
1301105Cfld4_mcystic fibrosis lung disease 4 (mouse)Not determined7101693381135693530Mouse
1300721Cfbw3_mcystic fibrosis body weight 3 (mouse)Not determined7101693381135693530Mouse
5491192Mobq1_mmultigenic obesity QTL 1 (mouse)Not determined7105250663139250811Mouse
14700684Civq1_mcerebral infarct volume QTL 1 (mouse)7109707335143707335Mouse
1300670Sluc19_msusceptibility to lung cancer 19 (mouse)Not determined7111166122144995196Mouse
14700687Civq5_mcerebral infarct volume QTL 5 (mouse)7109707335143707335Mouse
14700688Civq6_mcerebral infarct volume QTL 6 (mouse)7109707335143707335Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
1301478Eae26_msusceptibility to experimental allergic encephalomyelitis 26 (mouse)Not determined798164922132165010Mouse
13524852Asrq7a_macoustic startle response 7a (mouse)7105350008139350008Mouse
13524850Asrq7_macoustic startle response 7 (mouse)798394974132394974Mouse
15092059Wogrme1_mweek one growth rate, maternal effect 1 (mouse)7117199227134101729Mouse


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001418761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001418762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001418763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_175115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC156606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK086436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK140401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC058537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC089455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000046306   ⟹   ENSMUSP00000035583
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7130,990,381 - 131,012,250 (-)Ensembl
GRCm38.p6 Ensembl7131,388,652 - 131,410,521 (-)Ensembl
Ensembl Acc Id: ENSMUST00000121033   ⟹   ENSMUSP00000113714
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7130,992,097 - 131,012,226 (-)Ensembl
GRCm38.p6 Ensembl7131,390,368 - 131,410,497 (-)Ensembl
Ensembl Acc Id: ENSMUST00000128432   ⟹   ENSMUSP00000139528
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7130,995,124 - 131,012,224 (-)Ensembl
GRCm38.p6 Ensembl7131,393,395 - 131,410,495 (-)Ensembl
Ensembl Acc Id: ENSMUST00000142349   ⟹   ENSMUSP00000117823
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7130,998,470 - 131,012,134 (-)Ensembl
GRCm38.p6 Ensembl7131,396,741 - 131,410,405 (-)Ensembl
Ensembl Acc Id: ENSMUST00000154602   ⟹   ENSMUSP00000123530
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7130,994,255 - 131,012,107 (-)Ensembl
GRCm38.p6 Ensembl7131,392,526 - 131,410,378 (-)Ensembl
Ensembl Acc Id: ENSMUST00000207243   ⟹   ENSMUSP00000146590
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7130,994,376 - 131,012,202 (-)Ensembl
GRCm38.p6 Ensembl7131,392,647 - 131,410,473 (-)Ensembl
Ensembl Acc Id: ENSMUST00000208966
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7130,992,917 - 130,995,386 (-)Ensembl
GRCm38.p6 Ensembl7131,391,188 - 131,393,657 (-)Ensembl
RefSeq Acc Id: NM_001418761   ⟹   NP_001405690
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397130,990,381 - 131,012,243 (-)NCBI
RefSeq Acc Id: NM_001418762   ⟹   NP_001405691
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397130,990,381 - 131,012,243 (-)NCBI
RefSeq Acc Id: NM_001418763   ⟹   NP_001405692
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397130,990,381 - 131,012,243 (-)NCBI
RefSeq Acc Id: NM_175115   ⟹   NP_780324
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397130,990,381 - 131,012,243 (-)NCBI
GRCm387131,388,649 - 131,410,478 (-)NCBI
MGSCv377138,532,163 - 138,553,992 (-)RGD
Celera7131,199,793 - 131,221,622 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036153376   ⟹   XP_036009269
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397130,990,378 - 131,011,432 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036153377   ⟹   XP_036009270
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397130,990,378 - 131,012,210 (-)NCBI
Sequence:
RefSeq Acc Id: NP_780324   ⟸   NM_175115
- Peptide Label: isoform 1
- UniProtKB: Q8BU00 (UniProtKB/Swiss-Prot),   Q3USG0 (UniProtKB/Swiss-Prot),   Q3U549 (UniProtKB/Swiss-Prot),   Q8BZR5 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000035583   ⟸   ENSMUST00000046306
Ensembl Acc Id: ENSMUSP00000113714   ⟸   ENSMUST00000121033
Ensembl Acc Id: ENSMUSP00000123530   ⟸   ENSMUST00000154602
Ensembl Acc Id: ENSMUSP00000146590   ⟸   ENSMUST00000207243
Ensembl Acc Id: ENSMUSP00000139528   ⟸   ENSMUST00000128432
Ensembl Acc Id: ENSMUSP00000117823   ⟸   ENSMUST00000142349
RefSeq Acc Id: XP_036009270   ⟸   XM_036153377
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036009269   ⟸   XM_036153376
- Peptide Label: isoform X1
- UniProtKB: Q8BU00 (UniProtKB/Swiss-Prot),   Q3USG0 (UniProtKB/Swiss-Prot),   Q3U549 (UniProtKB/Swiss-Prot),   Q8BZR5 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001405690   ⟸   NM_001418761
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001405691   ⟸   NM_001418762
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001405692   ⟸   NM_001418763
- Peptide Label: isoform 1
- UniProtKB: Q8BU00 (UniProtKB/Swiss-Prot),   Q3USG0 (UniProtKB/Swiss-Prot),   Q3U549 (UniProtKB/Swiss-Prot),   Q8BZR5 (UniProtKB/Swiss-Prot)
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8BU00-F1-model_v2 AlphaFold Q8BU00 1-419 view protein structure

Promoters
RGD ID:8665835
Promoter ID:EPDNEW_M10949
Type:multiple initiation site
Name:Ikzf5_1
Description:Mus musculus IKAROS family zinc finger 5 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm387131,410,497 - 131,410,557EPDNEW
RGD ID:6841324
Promoter ID:MM_KWN:52957
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   Kidney,   MEF_B6
Transcripts:OTTMUST00000064991
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367138,552,989 - 138,553,489 (-)MPROMDB
RGD ID:6840472
Promoter ID:MM_KWN:52958
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000121033,   OTTMUST00000064962,   OTTMUST00000064988,   OTTMUST00000064990,   OTTMUST00000064992,   UC009KBK.1,   UC009KBL.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367138,553,906 - 138,554,406 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914393 AgrOrtholog
Ensembl Genes ENSMUSG00000040167 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000046306 ENTREZGENE
  ENSMUST00000046306.15 UniProtKB/Swiss-Prot
  ENSMUST00000121033 ENTREZGENE
  ENSMUST00000121033.8 UniProtKB/Swiss-Prot
  ENSMUST00000128432.3 UniProtKB/TrEMBL
  ENSMUST00000142349.3 UniProtKB/TrEMBL
  ENSMUST00000154602.8 UniProtKB/TrEMBL
  ENSMUST00000207243.2 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ikaros_C2H2-ZF UniProtKB/Swiss-Prot
  Znf_C2H2_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:67143 UniProtKB/Swiss-Prot
MGD MGI:1914393 ENTREZGENE
NCBI Gene 67143 ENTREZGENE
PANTHER ZINC FINGER PROTEIN UniProtKB/Swiss-Prot
  ZINC FINGER PROTEIN PEGASUS UniProtKB/Swiss-Prot
PhenoGen Ikzf5 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A087WNW9_MOUSE UniProtKB/TrEMBL
  A0A140LHX6_MOUSE UniProtKB/TrEMBL
  D3YVZ8_MOUSE UniProtKB/TrEMBL
  D3YYG0_MOUSE UniProtKB/TrEMBL
  IKZF5_MOUSE UniProtKB/Swiss-Prot
  Q3U549 ENTREZGENE
  Q3USG0 ENTREZGENE
  Q8BU00 ENTREZGENE
  Q8BZR5 ENTREZGENE
UniProt Secondary Q3U549 UniProtKB/Swiss-Prot
  Q3USG0 UniProtKB/Swiss-Prot
  Q8BZR5 UniProtKB/Swiss-Prot