Civq6_m QTL Report (Mus musculus) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
QTL Registration

QTL: Civq6_m (cerebral infarct volume QTL 6 (mouse)) Mus musculus

Symbol: Civq6_m
Name: cerebral infarct volume QTL 6 (mouse)
RGD ID: 14700688
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm397109,707,335 - 143,707,335MOUSEQTLGRCm39
GRCm387110,108,163 - 144,108,163MOUSEQTLGRCm38
cM Map7syntenicMOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
PMID:20031639  



1 to 20 of 1456 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
401837907LOC132412321STARR-positive B cell enhancer ABC_E2937109720979109721280Mouse
1317356Wee1WEE 1 homolog 1 (S. pombe)7109721266109742506Mouse
401842198LOC132412322STARR-positive B cell enhancer ABC_E65847109723087109723388Mouse
39128907LOC109279989VISTA enhancer mm7257109762016109765728Mouse
401708379LOC131373720STARR-seq mESC enhancer starr_198217109788257109790110Mouse
15017319Gm51505predicted gene, 515057109806408109806502Mouse
401832885LOC132412323STARR-positive B cell enhancer ABC_E82017109820803109821104Mouse
1313692Swap70SWA-70 protein7109820890109882720Mouse
401841522LOC132412324STARR-positive B cell enhancer ABC_E7047109841292109841593Mouse
9609238Gm32861predicted gene, 328617109884709109887605Mouse
401833008LOC132412325STARR-positive B cell enhancer ABC_E92967109885380109885680Mouse
1622431Gm9132predicted gene 91327109901182109902047Mouse
1622859Sbf2SET binding factor 27109907218110215150Mouse
2310128Gm9064predicted gene 90647110024277110024809Mouse
401833731LOC132412326STARR-positive B cell enhancer ABC_E104627110031404110031704Mouse
9664369Gm10087predicted gene 100877110118457110132352Mouse
5146993Gm17219predicted gene 172197110121273110121870Mouse
12796187Gm46027predicted gene, 460277110170277110205148Mouse
14996255Gm28863predicted gene 288637110223508110230104Mouse
730918Admadrenomedullin7110226864110229027Mouse

1 to 20 of 1456 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match

1 to 10 of 86 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357460Vtbt4_mvertebral trabecular bone trait 4 (mouse)Not determined7101693381135693530Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
38501066Tip2_mtuberculosis immunophenotype 2, spleen CFU (mouse)7124299223126899172Mouse
27226781Tibl3_mtibia length 3, 5 week (mouse)774849748122199223Mouse
1302032Alcp12_malcohol preference locus 12 (mouse)Not determined7111166122144995196Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
1301781Capsq3_mcapsaicin sensitivity related QTL 3 (mouse)Not determined787143137119485380Mouse
14746989Manh62_mmandible shape 62 (mouse)775742528109742528Mouse
11039524Tbbr3_mTrypanosoma brucei brucei response 3 (mouse)7100750722134750843Mouse
14746988Manh63_mmandible shape 63 (mouse)7127735437144995196Mouse

1 to 10 of 86 rows


Database
Acc Id
Source(s)
MGD MGI:6324319 MouseQtl