Gdpd3 (glycerophosphodiester phosphodiesterase domain containing 3) - Rat Genome Database

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Gene: Gdpd3 (glycerophosphodiester phosphodiesterase domain containing 3) Mus musculus
Analyze
Symbol: Gdpd3
Name: glycerophosphodiester phosphodiesterase domain containing 3
RGD ID: 1553087
MGI Page MGI
Description: Enables lysophospholipase activity and phosphoric diester hydrolase activity. Involved in N-acylethanolamine metabolic process and phosphatidylcholine catabolic process. Located in endoplasmic reticulum membrane and perinuclear region of cytoplasm. Orthologous to human GDPD3 (glycerophosphodiester phosphodiesterase domain containing 3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1110015E22Rik; glycerophosphodiester phosphodiesterase 7; glycerophosphodiester phosphodiesterase domain-containing protein 3; lysophospholipase D GDPD3
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397126,365,586 - 126,374,817 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7126,365,506 - 126,374,821 (+)EnsemblGRCm39 Ensembl
GRCm387126,766,414 - 126,775,645 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7126,766,334 - 126,775,649 (+)EnsemblGRCm38mm10GRCm38
MGSCv377133,909,928 - 133,919,159 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367126,558,321 - 126,566,793 (+)NCBIMGSCv36mm8
Celera7126,613,769 - 126,622,967 (+)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1-[(4-chlorophenyl)-phenylmethyl]-4-methylpiperazine  (ISO)
1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-2-benzofuran-5-carbonitrile  (ISO)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3',4,4',5-Pentachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2,4,6-trinitrobenzenesulfonic acid  (EXP)
2-hydroxypropanoic acid  (ISO)
4,4'-sulfonyldiphenol  (ISO)
amiodarone  (ISO)
amitriptyline  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (EXP,ISO)
calcitriol  (ISO)
CGP 52608  (ISO)
chlordecone  (EXP)
chlorpromazine  (ISO)
chlorpyrifos  (EXP)
chromium(6+)  (ISO)
citalopram  (ISO)
clobetasol  (EXP)
clofibrate  (EXP)
clomipramine  (ISO)
clozapine  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
diuron  (ISO)
doxepin  (ISO)
Enterolactone  (ISO)
flecainide  (ISO)
fluoxetine  (ISO)
folic acid  (ISO)
haloperidol  (ISO)
hydroquinone  (ISO)
imipramine  (ISO)
ketoconazole  (ISO)
loratadine  (ISO)
ozone  (ISO)
paraquat  (ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
perhexiline  (ISO)
phytoestrogen  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
sertraline  (ISO)
sodium arsenate  (ISO)
sodium fluoride  (EXP)
sotalol  (ISO)
tamoxifen  (ISO)
testosterone  (ISO)
testosterone undecanoate  (ISO)
Theaflavin 3,3'-digallate  (ISO)
thioridazine  (ISO)
triazines  (EXP)
trichloroethene  (ISO)
triphenyl phosphate  (ISO)
triptonide  (EXP)
urethane  (ISO)
valproic acid  (ISO)
zimeldine  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
lordokyphosis  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16602821   PMID:16949565   PMID:18799693  
PMID:21267068   PMID:21873635   PMID:25528375   PMID:26714588   PMID:27637550   PMID:30224518   PMID:32943626   PMID:34523685   PMID:38769197  


Genomics

Comparative Map Data
Gdpd3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397126,365,586 - 126,374,817 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7126,365,506 - 126,374,821 (+)EnsemblGRCm39 Ensembl
GRCm387126,766,414 - 126,775,645 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7126,766,334 - 126,775,649 (+)EnsemblGRCm38mm10GRCm38
MGSCv377133,909,928 - 133,919,159 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367126,558,321 - 126,566,793 (+)NCBIMGSCv36mm8
Celera7126,613,769 - 126,622,967 (+)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.25NCBI
GDPD3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381630,104,810 - 30,113,537 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1630,104,810 - 30,113,537 (-)EnsemblGRCh38hg38GRCh38
GRCh371630,116,131 - 30,124,858 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361630,023,632 - 30,032,379 (-)NCBINCBI36Build 36hg18NCBI36
Celera1672,671,173 - 72,679,590 (+)NCBICelera
Cytogenetic Map16p11.2NCBI
HuRef1627,777,317 - 27,786,009 (-)NCBIHuRef
CHM1_11631,331,886 - 31,340,633 (-)NCBICHM1_1
T2T-CHM13v2.01630,387,452 - 30,396,184 (-)NCBIT2T-CHM13v2.0
Gdpd3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81190,804,053 - 190,813,609 (+)NCBIGRCr8
mRatBN7.21181,373,505 - 181,383,063 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1181,366,626 - 181,383,063 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1189,724,810 - 189,734,377 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01196,910,884 - 196,920,451 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01189,578,238 - 189,587,789 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01198,199,032 - 198,209,178 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1198,199,622 - 198,209,150 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01205,178,902 - 205,189,234 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41185,941,893 - 185,984,348 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11186,091,716 - 186,101,328 (+)NCBI
Celera1179,029,033 - 179,038,589 (+)NCBICelera
Cytogenetic Map1q36NCBI
Gdpd3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554936,877,486 - 6,883,698 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554936,876,943 - 6,883,716 (+)NCBIChiLan1.0ChiLan1.0
GDPD3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21830,854,698 - 30,863,889 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11635,361,980 - 35,371,180 (+)NCBINHGRI_mPanPan1
PanPan1.11630,479,684 - 30,488,868 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1630,479,684 - 30,488,868 (-)Ensemblpanpan1.1panPan2
GDPD3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1618,103,273 - 18,108,818 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl618,103,267 - 18,108,533 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha619,681,939 - 19,687,461 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0618,239,288 - 18,244,820 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl618,239,282 - 18,251,475 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1618,038,241 - 18,043,775 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0617,953,632 - 17,959,163 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0618,269,266 - 18,274,790 (-)NCBIUU_Cfam_GSD_1.0
Gdpd3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344124,292,889 - 124,300,022 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650112,391,314 - 12,397,864 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650112,391,204 - 12,397,877 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GDPD3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl318,282,889 - 18,292,092 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1318,282,574 - 18,291,307 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
GDPD3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1526,545,766 - 26,554,767 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl526,546,323 - 26,554,700 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660682,984,234 - 2,992,852 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gdpd3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478213,158,975 - 13,164,070 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478213,158,514 - 13,164,090 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:84
Count of miRNA genes:81
Interacting mature miRNAs:82
Transcripts:ENSMUST00000032944
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357460Vtbt4_mvertebral trabecular bone trait 4 (mouse)Not determined7101693381135693530Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
11059561Lmr21a_mleishmaniasis resistance 21a (mouse)7117750722127967336Mouse
38501066Tip2_mtuberculosis immunophenotype 2, spleen CFU (mouse)7124299223126899172Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765249748126499172Mouse
27095903Scvln10_msacral vertebrae length 2, 10 week (mouse)781449748126499172Mouse
11059562Lmr21b_mleishmaniasis resistance 21b (mouse)7110967235144967336Mouse
1302032Alcp12_malcohol preference locus 12 (mouse)Not determined7111166122144995196Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
4141945Il4ppq_mIL-4 producing potential QTL (mouse)Not determined7124513662128819324Mouse
11039524Tbbr3_mTrypanosoma brucei brucei response 3 (mouse)7100750722134750843Mouse
27226769Tibl12_mtibia length 12, 10 week (mouse)787249208126499172Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
27226765Tibl18_mtibia length 18, 16 week (mouse)781849748126499172Mouse
4142444Femwf5_mfemur work to failure 5 (mouse)Not determined112552248144995196Mouse
1301447Fembm3_mfemoral bone morphometry 3 (mouse)Not determined7100993261134993342Mouse
10412104Tons2_mtongue size 2 (mouse)Not determined799837716133837716Mouse
1300677Bmd9_mbone mineral density 9 (mouse)Not determined7116634089144995196Mouse
4142312Nilac4_mnicotine induced locomotor activity 4 (mouse)Not determined7102485219136485380Mouse
1300747Skts2_mskin tumor susceptibility 2 (mouse)Not determined7112922733144995196Mouse
1301898Alcp14_malcohol preference locus 14 (mouse)Not determined7111166122144995196Mouse
38501072Stsl7_mSalmonella typhimurium susceptibility locus 7 (mouse)7115699235128501724Mouse
1357711Adbg1_madult body growth 1 (mouse)Not determined7118693381144398314Mouse
1301903Tlsm1_mthymic lymphoma susceptible 1 (mouse)Not determined7122250663135170901Mouse
10402499Lmr21_mleishmaniasis resistance 21 (mouse)Not determined7110967235144967336Mouse
1301773Stheal7_msoft tissue heal 7 (mouse)Not determined7119132573144995196Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
1301105Cfld4_mcystic fibrosis lung disease 4 (mouse)Not determined7101693381135693530Mouse
1300721Cfbw3_mcystic fibrosis body weight 3 (mouse)Not determined7101693381135693530Mouse
1300528Ssial3_msusceptibility to sialadenitis 3 (mouse)Not determined793391848127392041Mouse
27095930Ulnl10_mulna length 10, 16 week (mouse)780849748126699172Mouse
5491192Mobq1_mmultigenic obesity QTL 1 (mouse)Not determined7105250663139250811Mouse
14700684Civq1_mcerebral infarct volume QTL 1 (mouse)7109707335143707335Mouse
1300670Sluc19_msusceptibility to lung cancer 19 (mouse)Not determined7111166122144995196Mouse
14700687Civq5_mcerebral infarct volume QTL 5 (mouse)7109707335143707335Mouse
14700688Civq6_mcerebral infarct volume QTL 6 (mouse)7109707335143707335Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
1301478Eae26_msusceptibility to experimental allergic encephalomyelitis 26 (mouse)Not determined798164922132165010Mouse
27226790Feml15_mfemur length 15, 10 week (mouse)787249208126499172Mouse
1357613Bsbob2_mBSB obesity 2 (mouse)Not determined7122250663128819324Mouse
13524852Asrq7a_macoustic startle response 7a (mouse)7105350008139350008Mouse
13524850Asrq7_macoustic startle response 7 (mouse)798394974132394974Mouse
15092059Wogrme1_mweek one growth rate, maternal effect 1 (mouse)7117199227134101729Mouse

Markers in Region
Prkm3-rs1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387126,765,627 - 126,765,790UniSTSGRCm38
GRCm38314,099,562 - 14,099,731UniSTSGRCm38
MGSCv377133,909,141 - 133,909,304UniSTSGRCm37
MGSCv37314,099,562 - 14,099,731UniSTSGRCm37
Celera314,117,386 - 14,117,555UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map7F4UniSTS
Cytogenetic Map3A1UniSTS
cM Map31.0UniSTS
Mapk3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X126,611,439 - 126,611,600UniSTSGRCm38
GRCm387126,765,564 - 126,765,725UniSTSGRCm38
MGSCv377133,909,078 - 133,909,239UniSTSGRCm37
MGSCv37X123,218,134 - 123,218,295UniSTSGRCm37
Cytogenetic Map7F4UniSTS
Cytogenetic Map7F3UniSTS
cM Map761.0UniSTS
Mapk3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387126,765,577 - 126,765,679UniSTSGRCm38
MGSCv377133,909,091 - 133,909,193UniSTSGRCm37
Celera7126,613,012 - 126,613,114UniSTS
Cytogenetic Map7F4UniSTS
Cytogenetic Map7F3UniSTS
cM Map761.0UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000032944   ⟹   ENSMUSP00000032944
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7126,365,506 - 126,374,817 (+)Ensembl
GRCm38.p6 Ensembl7126,766,334 - 126,775,645 (+)Ensembl
Ensembl Acc Id: ENSMUST00000205468
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7126,366,019 - 126,367,833 (+)Ensembl
GRCm38.p6 Ensembl7126,766,847 - 126,768,661 (+)Ensembl
Ensembl Acc Id: ENSMUST00000205910
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7126,367,692 - 126,374,821 (+)Ensembl
GRCm38.p6 Ensembl7126,768,520 - 126,775,649 (+)Ensembl
Ensembl Acc Id: ENSMUST00000206350
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7126,366,347 - 126,367,207 (+)Ensembl
GRCm38.p6 Ensembl7126,767,175 - 126,768,035 (+)Ensembl
Ensembl Acc Id: ENSMUST00000206858
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7126,366,017 - 126,367,384 (+)Ensembl
GRCm38.p6 Ensembl7126,766,845 - 126,768,212 (+)Ensembl
Ensembl Acc Id: ENSMUST00000207004
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7126,367,322 - 126,370,344 (+)Ensembl
GRCm38.p6 Ensembl7126,768,150 - 126,771,172 (+)Ensembl
RefSeq Acc Id: NM_024228   ⟹   NP_077190
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397126,365,586 - 126,374,817 (+)NCBI
GRCm387126,766,414 - 126,775,645 (+)ENTREZGENE
MGSCv377133,909,928 - 133,919,159 (+)RGD
Celera7126,613,769 - 126,622,967 (+)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_077190   ⟸   NM_024228
- UniProtKB: Q9D1C0 (UniProtKB/Swiss-Prot),   Q99LY2 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000032944   ⟸   ENSMUST00000032944
Protein Domains
GP-PDE

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q99LY2-F1-model_v2 AlphaFold Q99LY2 1-330 view protein structure

Promoters
RGD ID:8665575
Promoter ID:EPDNEW_M10819
Type:initiation region
Name:Gdpd3_1
Description:Mus musculus glycerophosphodiester phosphodiesterase domain containing3 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm387126,766,411 - 126,766,471EPDNEW
RGD ID:6841166
Promoter ID:MM_KWN:52703
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver
Transcripts:NM_024228
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367133,909,766 - 133,910,387 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915866 AgrOrtholog
Ensembl Genes ENSMUSG00000030703 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000032944 ENTREZGENE
  ENSMUST00000032944.9 UniProtKB/Swiss-Prot
Gene3D-CATH 3.20.20.190 UniProtKB/Swiss-Prot
InterPro GDPD-Related UniProtKB/Swiss-Prot
  GP_PDE_dom UniProtKB/Swiss-Prot
  PLC-like_Pdiesterase_TIM-brl UniProtKB/Swiss-Prot
KEGG Report mmu:68616 UniProtKB/Swiss-Prot
MGD MGI:1915866 ENTREZGENE
NCBI Gene 68616 ENTREZGENE
PANTHER LYSOPHOSPHOLIPASE D GDPD3 UniProtKB/Swiss-Prot
  PHOSPHATIDYLGLYCEROL PHOSPHOLIPASE C UniProtKB/Swiss-Prot
Pfam GDPD UniProtKB/Swiss-Prot
PhenoGen Gdpd3 PhenoGen
PROSITE GP_PDE UniProtKB/Swiss-Prot
Superfamily-SCOP SSF51695 UniProtKB/Swiss-Prot
UniProt GDPD3_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q9D1C0 ENTREZGENE
UniProt Secondary Q9D1C0 UniProtKB/Swiss-Prot