Ccp110 (centriolar coiled coil protein 110) - Rat Genome Database

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Gene: Ccp110 (centriolar coiled coil protein 110) Mus musculus
Analyze
Symbol: Ccp110
Name: centriolar coiled coil protein 110
RGD ID: 1321452
MGI Page MGI
Description: Involved in ciliary basal body organization; negative regulation of cilium assembly; and positive regulation of cilium assembly. Located in centriole and centrosome. Is expressed in cerebral cortex; embryo; inner cell mass; and olfactory epithelium. Orthologous to human CCP110 (centriolar coiled-coil protein 110).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 6330503K22Rik; AA415922; AI427129; AW557948; centriolar coiled-coil protein of 110 kDa; centrosomal protein CP110; centrosomal protein of 110 kDa; cep110; CP11; CP110
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397118,311,740 - 118,336,247 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7118,311,775 - 118,336,247 (+)EnsemblGRCm39 Ensembl
GRCm387118,712,515 - 118,737,024 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7118,712,552 - 118,737,024 (+)EnsemblGRCm38mm10GRCm38
MGSCv377125,856,125 - 125,880,533 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367118,503,760 - 118,528,168 (+)NCBIMGSCv36mm8
Celera7118,650,794 - 118,675,513 (+)NCBICelera
Cytogenetic Map7F2NCBI
cM Map763.58NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11163258   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15102471   PMID:15368895  
PMID:15489334   PMID:16141072   PMID:16141073   PMID:17015433   PMID:17719545   PMID:18694559   PMID:20596027   PMID:21267068   PMID:21565611   PMID:21873635   PMID:22684256   PMID:22851319  
PMID:24421332   PMID:26496610   PMID:26719793   PMID:26965371   PMID:28923932   PMID:29038301   PMID:29487109   PMID:30375385   PMID:30626697   PMID:32803714   PMID:34321999   PMID:35301795  
PMID:36114006  


Genomics

Comparative Map Data
Ccp110
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397118,311,740 - 118,336,247 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7118,311,775 - 118,336,247 (+)EnsemblGRCm39 Ensembl
GRCm387118,712,515 - 118,737,024 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7118,712,552 - 118,737,024 (+)EnsemblGRCm38mm10GRCm38
MGSCv377125,856,125 - 125,880,533 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367118,503,760 - 118,528,168 (+)NCBIMGSCv36mm8
Celera7118,650,794 - 118,675,513 (+)NCBICelera
Cytogenetic Map7F2NCBI
cM Map763.58NCBI
CCP110
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381619,523,942 - 19,553,408 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1619,523,811 - 19,553,408 (+)EnsemblGRCh38hg38GRCh38
GRCh371619,535,264 - 19,564,730 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361619,442,709 - 19,472,231 (+)NCBINCBI36Build 36hg18NCBI36
Celera1618,684,185 - 18,713,728 (+)NCBICelera
Cytogenetic Map16p12.3NCBI
HuRef1618,072,098 - 18,101,330 (+)NCBIHuRef
CHM1_11619,622,433 - 19,651,971 (+)NCBICHM1_1
T2T-CHM13v2.01619,454,815 - 19,484,280 (+)NCBIT2T-CHM13v2.0
Ccp110
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81182,475,571 - 182,504,235 (+)NCBIGRCr8
mRatBN7.21173,042,238 - 173,072,873 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1173,042,310 - 173,072,873 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1181,355,014 - 181,382,767 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01188,541,119 - 188,568,873 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01181,271,299 - 181,299,190 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01188,417,012 - 188,444,991 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1188,420,461 - 188,444,991 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01195,361,581 - 195,387,930 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41176,932,477 - 176,961,863 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11177,076,532 - 177,097,062 (+)NCBI
Celera1170,809,711 - 170,837,307 (+)NCBICelera
Cytogenetic Map1q35NCBI
Ccp110
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554423,227,990 - 3,260,776 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554423,223,549 - 3,261,437 (+)NCBIChiLan1.0ChiLan1.0
CCP110
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21820,788,296 - 20,818,208 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11625,309,627 - 25,339,543 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01618,758,333 - 18,787,920 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11619,624,708 - 19,654,131 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1619,624,754 - 19,654,123 (+)Ensemblpanpan1.1panPan2
CCP110
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1625,713,100 - 25,738,854 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl625,594,813 - 25,738,776 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha627,075,292 - 27,101,634 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0625,867,359 - 25,893,912 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl625,867,363 - 25,894,312 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1625,667,400 - 25,693,940 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0625,562,687 - 25,588,996 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0625,951,507 - 25,978,065 (-)NCBIUU_Cfam_GSD_1.0
Ccp110
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344117,097,280 - 117,122,514 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365015,199,055 - 5,221,624 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365015,195,168 - 5,221,166 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CCP110
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl326,160,196 - 26,188,057 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1326,160,195 - 26,188,092 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2326,876,447 - 26,904,217 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CCP110
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1517,804,711 - 17,834,744 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl517,804,751 - 17,835,890 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606812,096,167 - 12,126,294 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ccp110
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247822,876,478 - 2,898,471 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247822,871,568 - 2,898,193 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ccp110
910 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1323
Count of miRNA genes:479
Interacting mature miRNAs:567
Transcripts:ENSMUST00000038650, ENSMUST00000106557, ENSMUST00000123178, ENSMUST00000140831, ENSMUST00000149056
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745161966118693530Mouse
13208555Lgth10_mbody length 10 (mouse)751649748125599172Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
26884408Bzwq13_mbi-zygomatic width QTL 13, 16 week (mouse)761749748121399223Mouse
27095916Scvln15_msacral vertebrae length 2, 16 week (mouse)761749748123699223Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765249748126499172Mouse
27226715Metcl3_mmetatarsal-calcaneal length 3, 5 week (mouse)767849748119499223Mouse
26884444Sklq8_mskull length QTL 8, 10 week (mouse)767849748124199223Mouse
26884451Sklq14_mskull length QTL 14, 16 week (mouse)767849748124999172Mouse
27095907Scvln4_msacral vertebrae length 2, 5 week (mouse)769949748120499223Mouse
27095910Pglq13_mpelvic girdle length QTL 13, 16 week (mouse)773049748125699172Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
27226745Metcl9_mmetatarsal-calcaneal length 9, 10 week (mouse)774849748122199223Mouse
27226781Tibl3_mtibia length 3, 5 week (mouse)774849748122199223Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse
27095930Ulnl10_mulna length 10, 16 week (mouse)780849748126699172Mouse
27095923Pglq3_mpelvic girdle length QTL 3, 5 week (mouse)781249748124199223Mouse
27095903Scvln10_msacral vertebrae length 2, 10 week (mouse)781449748126499172Mouse
27226765Tibl18_mtibia length 18, 16 week (mouse)781849748126499172Mouse
27226763Feml20_mfemur length 20, 16 week (mouse)785049208124199223Mouse
1301647Elpt_melevated leptin (mouse)Not determined786500186120500329Mouse
1301188Heal6_mwound healing/regeneration 6 (mouse)Not determined787043932121044066Mouse
1302062Stheal6_msoft tissue heal 6 (mouse)Not determined787043932121044066Mouse
13463473Hbbcq4_mhemoglobin concentration QTL 4 (mouse)787043932121044066Mouse
1301781Capsq3_mcapsaicin sensitivity related QTL 3 (mouse)Not determined787143137119485380Mouse
27226769Tibl12_mtibia length 12, 10 week (mouse)787249208126499172Mouse
27226790Feml15_mfemur length 15, 10 week (mouse)787249208126499172Mouse
1357664Nba3_mNew Zealand Black autoimmunity 3 (mouse)Not determined791482996125483156Mouse
1301937Skull10_mskull morphology 10 (mouse)Not determined791482996125483156Mouse
1300528Ssial3_msusceptibility to sialadenitis 3 (mouse)Not determined793391848127392041Mouse
1301478Eae26_msusceptibility to experimental allergic encephalomyelitis 26 (mouse)Not determined798164922132165010Mouse
13524850Asrq7_macoustic startle response 7 (mouse)798394974132394974Mouse
10412104Tons2_mtongue size 2 (mouse)Not determined799837716133837716Mouse
11039524Tbbr3_mTrypanosoma brucei brucei response 3 (mouse)7100750722134750843Mouse
1301447Fembm3_mfemoral bone morphometry 3 (mouse)Not determined7100993261134993342Mouse
1357460Vtbt4_mvertebral trabecular bone trait 4 (mouse)Not determined7101693381135693530Mouse
1301105Cfld4_mcystic fibrosis lung disease 4 (mouse)Not determined7101693381135693530Mouse
1300721Cfbw3_mcystic fibrosis body weight 3 (mouse)Not determined7101693381135693530Mouse
4142312Nilac4_mnicotine induced locomotor activity 4 (mouse)Not determined7102485219136485380Mouse
5491192Mobq1_mmultigenic obesity QTL 1 (mouse)Not determined7105250663139250811Mouse
13524852Asrq7a_macoustic startle response 7a (mouse)7105350008139350008Mouse
4141056Lskcn2_mLSK cell number 2 (mouse)Not determined108482996118693530Mouse
14700684Civq1_mcerebral infarct volume QTL 1 (mouse)7109707335143707335Mouse
14700687Civq5_mcerebral infarct volume QTL 5 (mouse)7109707335143707335Mouse
14700688Civq6_mcerebral infarct volume QTL 6 (mouse)7109707335143707335Mouse
11059562Lmr21b_mleishmaniasis resistance 21b (mouse)7110967235144967336Mouse
10402499Lmr21_mleishmaniasis resistance 21 (mouse)Not determined7110967235144967336Mouse
1302032Alcp12_malcohol preference locus 12 (mouse)Not determined7111166122144995196Mouse
1301898Alcp14_malcohol preference locus 14 (mouse)Not determined7111166122144995196Mouse
1300670Sluc19_msusceptibility to lung cancer 19 (mouse)Not determined7111166122144995196Mouse
4142444Femwf5_mfemur work to failure 5 (mouse)Not determined112552248144995196Mouse
1300747Skts2_mskin tumor susceptibility 2 (mouse)Not determined7112922733144995196Mouse
38501072Stsl7_mSalmonella typhimurium susceptibility locus 7 (mouse)7115699235128501724Mouse
1300677Bmd9_mbone mineral density 9 (mouse)Not determined7116634089144995196Mouse
15092059Wogrme1_mweek one growth rate, maternal effect 1 (mouse)7117199227134101729Mouse
11059561Lmr21a_mleishmaniasis resistance 21a (mouse)7117750722127967336Mouse

Markers in Region
AW557948  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387118,736,568 - 118,736,682UniSTSGRCm38
MGSCv377125,880,082 - 125,880,196UniSTSGRCm37
Celera7118,675,062 - 118,675,176UniSTS
Cytogenetic Map7F2UniSTS
Whitehead/MRC_RH71203.11UniSTS
AI427129  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387118,736,663 - 118,736,875UniSTSGRCm38
MGSCv377125,880,177 - 125,880,389UniSTSGRCm37
Celera7118,675,157 - 118,675,369UniSTS
Cytogenetic Map7F2UniSTS
Whitehead/MRC_RH71202.79UniSTS
UniSTS:235760  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387118,734,609 - 118,734,905UniSTSGRCm38
MGSCv377125,878,123 - 125,878,419UniSTSGRCm37
Celera7118,673,103 - 118,673,399UniSTS
Cytogenetic Map7F2UniSTS
X79131  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38235,155,292 - 35,155,383UniSTSGRCm38
MGSCv37235,010,812 - 35,010,903UniSTSGRCm37
Celera234,849,788 - 34,849,879UniSTS
Cytogenetic Map2B-C1UniSTS
Whitehead/MRC_RH2663.09UniSTS
AA968343  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38235,178,413 - 35,178,522UniSTSGRCm38
MGSCv37235,033,933 - 35,034,042UniSTSGRCm37
Celera234,872,909 - 34,873,018UniSTS
Cytogenetic Map2B-C1UniSTS
Whitehead/MRC_RH2663.09UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000038650   ⟹   ENSMUSP00000038881
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7118,314,597 - 118,336,244 (+)Ensembl
GRCm38.p6 Ensembl7118,715,374 - 118,737,021 (+)Ensembl
RefSeq Acc Id: ENSMUST00000106557   ⟹   ENSMUSP00000102167
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7118,311,775 - 118,336,247 (+)Ensembl
GRCm38.p6 Ensembl7118,712,552 - 118,737,024 (+)Ensembl
RefSeq Acc Id: ENSMUST00000123178   ⟹   ENSMUSP00000147070
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7118,320,838 - 118,336,239 (+)Ensembl
GRCm38.p6 Ensembl7118,721,615 - 118,737,016 (+)Ensembl
RefSeq Acc Id: ENSMUST00000140831
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7118,329,474 - 118,331,685 (+)Ensembl
GRCm38.p6 Ensembl7118,730,251 - 118,732,462 (+)Ensembl
RefSeq Acc Id: ENSMUST00000149056
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7118,325,188 - 118,336,247 (+)Ensembl
GRCm38.p6 Ensembl7118,725,965 - 118,737,024 (+)Ensembl
RefSeq Acc Id: ENSMUST00000208766   ⟹   ENSMUSP00000146903
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7118,325,778 - 118,335,009 (+)Ensembl
GRCm38.p6 Ensembl7118,726,555 - 118,735,786 (+)Ensembl
RefSeq Acc Id: NM_001360793   ⟹   NP_001347722
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397118,311,766 - 118,336,247 (+)NCBI
GRCm387118,712,543 - 118,737,024 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001360794   ⟹   NP_001347723
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397118,311,766 - 118,336,247 (+)NCBI
GRCm387118,712,543 - 118,737,024 (+)NCBI
Sequence:
RefSeq Acc Id: NM_182995   ⟹   NP_892040
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397118,311,766 - 118,336,247 (+)NCBI
GRCm387118,712,543 - 118,737,024 (+)NCBI
MGSCv377125,856,125 - 125,880,533 (+)RGD
Celera7118,650,794 - 118,675,513 (+)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006507159   ⟹   XP_006507222
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397118,311,741 - 118,336,247 (+)NCBI
GRCm387118,712,516 - 118,735,565 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017321910   ⟹   XP_017177399
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397118,311,740 - 118,336,237 (+)NCBI
GRCm387118,712,515 - 118,736,540 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_892040   ⟸   NM_182995
- Peptide Label: isoform 1
- UniProtKB: Q6A072 (UniProtKB/Swiss-Prot),   Q7TSH4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006507222   ⟸   XM_006507159
- Peptide Label: isoform X2
- UniProtKB: A0A140LJ44 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017177399   ⟸   XM_017321910
- Peptide Label: isoform X1
- UniProtKB: A0A140LJ44 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001347723   ⟸   NM_001360794
- Peptide Label: isoform 3
- UniProtKB: A0A140LJ44 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001347722   ⟸   NM_001360793
- Peptide Label: isoform 2
RefSeq Acc Id: ENSMUSP00000102167   ⟸   ENSMUST00000106557
RefSeq Acc Id: ENSMUSP00000146903   ⟸   ENSMUST00000208766
RefSeq Acc Id: ENSMUSP00000147070   ⟸   ENSMUST00000123178
RefSeq Acc Id: ENSMUSP00000038881   ⟸   ENSMUST00000038650

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q7TSH4-F1-model_v2 AlphaFold Q7TSH4 1-1004 view protein structure

Promoters
RGD ID:8665361
Promoter ID:EPDNEW_M10712
Type:initiation region
Name:Ccp110_1
Description:Mus musculus centriolar coiled coil protein 110 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M10713  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm387118,712,599 - 118,712,659EPDNEW
RGD ID:8665363
Promoter ID:EPDNEW_M10713
Type:multiple initiation site
Name:Ccp110_2
Description:Mus musculus centriolar coiled coil protein 110 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M10712  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm387118,725,969 - 118,726,029EPDNEW
RGD ID:6840300
Promoter ID:MM_KWN:52444
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Lung,   MEF_B4
Transcripts:ENSMUST00000106557
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367125,855,874 - 125,856,374 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2141942 AgrOrtholog
Ensembl Genes ENSMUSG00000033904 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000038650.9 UniProtKB/Swiss-Prot
  ENSMUST00000106557 ENTREZGENE
  ENSMUST00000106557.8 UniProtKB/Swiss-Prot
  ENSMUST00000123178 ENTREZGENE
  ENSMUST00000123178.8 UniProtKB/TrEMBL
  ENSMUST00000208766.2 UniProtKB/TrEMBL
InterPro CCP110 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:101565 UniProtKB/Swiss-Prot
MGD MGI:2141942 ENTREZGENE
NCBI Gene 101565 ENTREZGENE
PANTHER CENTRIOLAR COILED-COIL PROTEIN OF 110 KDA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR13594 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CaM_bind UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ccp110 PhenoGen
UniProt A0A140LIP6_MOUSE UniProtKB/TrEMBL
  A0A140LJ44 ENTREZGENE, UniProtKB/TrEMBL
  CP110_MOUSE UniProtKB/Swiss-Prot
  Q3URA7_MOUSE UniProtKB/TrEMBL
  Q6A072 ENTREZGENE
  Q7TSH4 ENTREZGENE
  Q7TSU8_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q6A072 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-09-25 Ccp110  centriolar coiled coil protein 110  6330503K22Rik  RIKEN cDNA 6330503K22 gene  Symbol and/or name change 5135510 APPROVED