Krtap5-26 (keratin associated protein 5-26) - Rat Genome Database

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Gene: Krtap5-26 (keratin associated protein 5-26) Mus musculus
Analyze
No known orthologs.
Symbol: Krtap5-26 (Ensembl: Gm45618)
Name: keratin associated protein 5-26 (Ensembl:predicted gene 45618)
RGD ID: 11576695
MGI Page MGI
Description: Orthologous to several human genes including KRTAP5-10 (keratin associated protein 5-10); KRTAP5-11 (keratin associated protein 5-11); and KRTAP5-2 (keratin associated protein 5-2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Gm45618; keratin-associated protein 5-4-like
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397141,673,352 - 141,674,637 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7141,673,807 - 141,674,466 (-)EnsemblGRCm39 Ensembl
GRCm387142,119,615 - 142,120,900 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7142,120,070 - 142,120,729 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic Map7F5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References
Additional References at PubMed
PMID:26985665  


Genomics

Variants

.
Variants in Krtap5-26
23 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300747Skts2_mskin tumor susceptibility 2 (mouse)Not determined7112922733144995196Mouse
1300566Sluc8_msusceptibility to lung cancer 8 (mouse)Not determined7127398151144995196Mouse
10402499Lmr21_mleishmaniasis resistance 21 (mouse)Not determined7110967235144967336Mouse
1301773Stheal7_msoft tissue heal 7 (mouse)Not determined7119132573144995196Mouse
14746988Manh63_mmandible shape 63 (mouse)7127735437144995196Mouse
14700687Civq5_mcerebral infarct volume QTL 5 (mouse)7109707335143707335Mouse
1301898Alcp14_malcohol preference locus 14 (mouse)Not determined7111166122144995196Mouse
1357711Adbg1_madult body growth 1 (mouse)Not determined7118693381144398314Mouse
1300670Sluc19_msusceptibility to lung cancer 19 (mouse)Not determined7111166122144995196Mouse
11059562Lmr21b_mleishmaniasis resistance 21b (mouse)7110967235144967336Mouse
1301590Pbwg3_mpostnatal body weight growth 3 (mouse)Not determined7127311241144995196Mouse
14700684Civq1_mcerebral infarct volume QTL 1 (mouse)7109707335143707335Mouse
1300677Bmd9_mbone mineral density 9 (mouse)Not determined7116634089144995196Mouse
1302032Alcp12_malcohol preference locus 12 (mouse)Not determined7111166122144995196Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
4142444Femwf5_mfemur work to failure 5 (mouse)Not determined112552248144995196Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
14700688Civq6_mcerebral infarct volume QTL 6 (mouse)7109707335143707335Mouse


Expression


Sequence


RefSeq Acc Id: ENSMUST00000209890   ⟹   ENSMUSP00000147854
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7141,673,807 - 141,674,466 (-)Ensembl
GRCm38.p6 Ensembl7142,120,070 - 142,120,729 (-)Ensembl
RefSeq Acc Id: NM_001347558   ⟹   NP_001334487
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397141,673,352 - 141,674,637 (-)NCBI
GRCm387142,119,615 - 142,120,900 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001334487 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000147854
  ENSMUSP00000147854.2
RefSeq Acc Id: NP_001334487   ⟸   NM_001347558
- UniProtKB: A0A1B0GSA0 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000147854   ⟸   ENSMUST00000209890

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A1B0GSA0-F1-model_v2 AlphaFold A0A1B0GSA0 1-219 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:5791454 AgrOrtholog
Ensembl Genes ENSMUSG00000109859 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000209890 ENTREZGENE
  ENSMUST00000209890.2 UniProtKB/TrEMBL
KEGG Report mmu:108167466 UniProtKB/TrEMBL
MGD MGI:5791454 ENTREZGENE
NCBI Gene Gm45618 ENTREZGENE
PhenoGen Krtap5-26 PhenoGen
UniProt A0A1B0GSA0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-02-19 Krtap5-26  keratin associated protein 5-26  Gm45618  predicted gene 45618  Symbol and/or name updated 27372883 PROVISIONAL