Mir762 (microRNA 762) - Rat Genome Database

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Gene: Mir762 (microRNA 762) Mus musculus
Analyze
Symbol: Mir762
Name: microRNA 762
RGD ID: 1625983
MGI Page MGI
Description: Acts upstream of or within several processes, including cellular response to amino acid stimulus; response to muscle activity; and sensory perception of sound. Is expressed in future brain. Orthologous to human MIR762 (microRNA 762).
Type: ncrna (Ensembl: miRNA)
RefSeq Status: PROVISIONAL
Previously known as: mir-7; mir-762; Mirn; Mirn762; mmu-mir-7; mmu-mir-762
RGD Orthologs
Human
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397127,307,659 - 127,307,734 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7127,307,659 - 127,307,734 (+)EnsemblGRCm39 Ensembl
GRCm387127,708,487 - 127,708,562 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7127,708,487 - 127,708,562 (+)EnsemblGRCm38mm10GRCm38
MGSCv377134,852,001 - 134,852,076 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera7127,547,549 - 127,547,624 (+)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.68NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

References
Additional References at PubMed
PMID:16381832   PMID:16954537   PMID:18723672   PMID:20086200   PMID:20548288   PMID:21267068   PMID:21770019   PMID:22391449   PMID:23646144   PMID:27905554   PMID:30415659   PMID:30910812  
PMID:31235686   PMID:31522342   PMID:32544377   PMID:34092606   PMID:34251977   PMID:34315090  


Genomics

Comparative Map Data
Mir762
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397127,307,659 - 127,307,734 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7127,307,659 - 127,307,734 (+)EnsemblGRCm39 Ensembl
GRCm387127,708,487 - 127,708,562 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7127,708,487 - 127,708,562 (+)EnsemblGRCm38mm10GRCm38
MGSCv377134,852,001 - 134,852,076 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera7127,547,549 - 127,547,624 (+)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.68NCBI
MIR762
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381630,893,903 - 30,893,985 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1630,893,903 - 30,893,985 (+)EnsemblGRCh38hg38GRCh38
GRCh371630,905,224 - 30,905,306 (+)NCBIGRCh37GRCh37hg19GRCh37
Celera1629,392,438 - 29,392,517 (-)NCBICelera
Cytogenetic Map16p11.2NCBI
HuRef1628,467,982 - 28,468,064 (+)NCBIHuRef
CHM1_11632,222,310 - 32,222,392 (+)NCBICHM1_1
T2T-CHM13v2.01631,281,361 - 31,281,443 (+)NCBIT2T-CHM13v2.0

miRNA Target Status

Predicted Targets
Summary Value
Count of predictions:43721
Count of gene targets:16030
Count of transcripts:31495
Interacting mature miRNAs:mmu-miR-762
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357460Vtbt4_mvertebral trabecular bone trait 4 (mouse)Not determined7101693381135693530Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
11059561Lmr21a_mleishmaniasis resistance 21a (mouse)7117750722127967336Mouse
11059562Lmr21b_mleishmaniasis resistance 21b (mouse)7110967235144967336Mouse
1302032Alcp12_malcohol preference locus 12 (mouse)Not determined7111166122144995196Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
4141945Il4ppq_mIL-4 producing potential QTL (mouse)Not determined7124513662128819324Mouse
11039524Tbbr3_mTrypanosoma brucei brucei response 3 (mouse)7100750722134750843Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
4142444Femwf5_mfemur work to failure 5 (mouse)Not determined112552248144995196Mouse
1301447Fembm3_mfemoral bone morphometry 3 (mouse)Not determined7100993261134993342Mouse
10412104Tons2_mtongue size 2 (mouse)Not determined799837716133837716Mouse
1300677Bmd9_mbone mineral density 9 (mouse)Not determined7116634089144995196Mouse
4142312Nilac4_mnicotine induced locomotor activity 4 (mouse)Not determined7102485219136485380Mouse
1300747Skts2_mskin tumor susceptibility 2 (mouse)Not determined7112922733144995196Mouse
1301898Alcp14_malcohol preference locus 14 (mouse)Not determined7111166122144995196Mouse
38501072Stsl7_mSalmonella typhimurium susceptibility locus 7 (mouse)7115699235128501724Mouse
1357711Adbg1_madult body growth 1 (mouse)Not determined7118693381144398314Mouse
1301903Tlsm1_mthymic lymphoma susceptible 1 (mouse)Not determined7122250663135170901Mouse
10402499Lmr21_mleishmaniasis resistance 21 (mouse)Not determined7110967235144967336Mouse
1301773Stheal7_msoft tissue heal 7 (mouse)Not determined7119132573144995196Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
1301105Cfld4_mcystic fibrosis lung disease 4 (mouse)Not determined7101693381135693530Mouse
1300721Cfbw3_mcystic fibrosis body weight 3 (mouse)Not determined7101693381135693530Mouse
1300528Ssial3_msusceptibility to sialadenitis 3 (mouse)Not determined793391848127392041Mouse
5491192Mobq1_mmultigenic obesity QTL 1 (mouse)Not determined7105250663139250811Mouse
14700684Civq1_mcerebral infarct volume QTL 1 (mouse)7109707335143707335Mouse
1300670Sluc19_msusceptibility to lung cancer 19 (mouse)Not determined7111166122144995196Mouse
14700687Civq5_mcerebral infarct volume QTL 5 (mouse)7109707335143707335Mouse
14700688Civq6_mcerebral infarct volume QTL 6 (mouse)7109707335143707335Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
1301478Eae26_msusceptibility to experimental allergic encephalomyelitis 26 (mouse)Not determined798164922132165010Mouse
1357613Bsbob2_mBSB obesity 2 (mouse)Not determined7122250663128819324Mouse
13524852Asrq7a_macoustic startle response 7a (mouse)7105350008139350008Mouse
13524850Asrq7_macoustic startle response 7 (mouse)798394974132394974Mouse
15092059Wogrme1_mweek one growth rate, maternal effect 1 (mouse)7117199227134101729Mouse


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NR_030428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC124507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000103255
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7127,307,659 - 127,307,734 (+)Ensembl
GRCm38.p6 Ensembl7127,708,487 - 127,708,562 (+)Ensembl
RefSeq Acc Id: NR_030428
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397127,307,659 - 127,307,734 (+)NCBI
GRCm387127,708,487 - 127,708,562 (+)ENTREZGENE
MGSCv377134,852,001 - 134,852,076 (+)RGD
Celera7127,547,549 - 127,547,624 (+)RGD
cM Map7 ENTREZGENE
Sequence:
Promoters
RGD ID:8665703
Promoter ID:EPDNEW_M10882
Type:single initiation site
Name:Mir762_1
Description:Mus musculus microRNA 762 , microRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm387127,708,560 - 127,708,620EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3691607 AgrOrtholog
Ensembl Genes ENSMUSG00000076454 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000103255 ENTREZGENE
MGD MGI:3691607 ENTREZGENE
miRBase MI0004215 ENTREZGENE
NCBI Gene 791073 ENTREZGENE
PhenoGen Mir762 PhenoGen
RNAcentral URS00002EEDBE RNACentral
  URS000075E695 RNACentral