Coro1a (coronin, actin binding protein 1A) - Rat Genome Database
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Gene: Coro1a (coronin, actin binding protein 1A) Mus musculus
Analyze
Symbol: Coro1a
Name: coronin, actin binding protein 1A
RGD ID: 732929
MGI Page MGI
Description: Exhibits actin filament binding activity and identical protein binding activity. Involved in several processes, including early endosome to recycling endosome transport; nerve growth factor signaling pathway; and regulation of organelle organization. Localizes to several cellular components, including glutamatergic synapse; immunological synapse; and stereocilium tip. Predicted to colocalize with cortical actin cytoskeleton. Is expressed in several structures, including alimentary system; immune system; male reproductive gland or organ; nervous system; and skeletal muscle. Used to study severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-positive, Nk cell-positive. Human ortholog(s) of this gene implicated in coronin-1A deficiency. Orthologous to human CORO1A (coronin 1A).
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: Cl; Clabp; clipin-A; coronin 1; coronin 1a; coronin-1A; coronin-like actin binding protein; coronin-like protein A; coronin-like protein p57; Lmb; Lmb3; p5; p57; TACO; tryptophan aspartate-containing coat protein
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397126,298,946 - 126,303,988 (-)NCBIGRCm39mm39
GRCm39 Ensembl7126,298,945 - 126,306,959 (-)Ensembl
GRCm387126,699,774 - 126,704,816 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7126,699,773 - 126,707,787 (-)EnsemblGRCm38mm10GRCm38
MGSCv377133,843,288 - 133,848,268 (-)NCBIGRCm37mm9NCBIm37
MGSCv367126,490,922 - 126,495,902 (-)NCBImm8
Celera7126,547,074 - 126,552,054 (-)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3H-1,2-dithiole-3-thione  (ISO)
4-amino-2,6-dinitrotoluene  (ISO)
7,12-dimethyltetraphene  (ISO)
acetamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP)
bisphenol A  (EXP,ISO)
buta-1,3-diene  (EXP)
butanal  (ISO)
C60 fullerene  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
chenodeoxycholic acid  (ISO)
chloroprene  (EXP)
choline  (EXP)
chromium(6+)  (ISO)
cisplatin  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
deoxynivalenol  (EXP)
diarsenic trioxide  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
endosulfan  (ISO)
ethanol  (EXP)
folic acid  (EXP)
formaldehyde  (ISO)
gentamycin  (ISO)
hypochlorous acid  (EXP)
L-methionine  (EXP)
lipopolysaccharide  (EXP)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
methylseleninic acid  (ISO)
N-nitrosodiethylamine  (ISO)
N-nitrosomorpholine  (ISO)
nickel atom  (ISO)
paracetamol  (EXP)
pentanal  (ISO)
PhIP  (ISO)
pirinixic acid  (EXP)
resveratrol  (ISO)
sarin  (ISO)
SB 431542  (ISO)
silicon dioxide  (EXP,ISO)
simvastatin  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
Soman  (ISO)
tamibarotene  (ISO)
tamoxifen  (EXP)
tetrachloromethane  (EXP)
thapsigargin  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
triptonide  (EXP)
tris(2-butoxyethyl) phosphate  (ISO)
tunicamycin  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:2074115   PMID:8871639   PMID:8889548   PMID:9435347   PMID:9449705   PMID:9778037   PMID:9798653   PMID:10337629   PMID:10338208   PMID:10349636   PMID:10461187   PMID:10610183  
PMID:10615997   PMID:11042159   PMID:11076861   PMID:12144559   PMID:12477932   PMID:14512017   PMID:14734608   PMID:14978078   PMID:15489334   PMID:15800061   PMID:15829569   PMID:16141072  
PMID:16141073   PMID:16407068   PMID:16517735   PMID:16902139   PMID:17198697   PMID:17548658   PMID:17632055   PMID:17652161   PMID:18162581   PMID:18199416   PMID:18345003   PMID:18836449  
PMID:18941544   PMID:19201848   PMID:19234169   PMID:20059315   PMID:20643816   PMID:21267068   PMID:21289301   PMID:21308776   PMID:21339362   PMID:21700422   PMID:21844203   PMID:21873635  
PMID:21885021   PMID:22016387   PMID:22223354   PMID:22256790   PMID:22922362   PMID:23099476   PMID:23793062   PMID:23856257   PMID:23933558   PMID:24194600   PMID:24270184   PMID:24667537  
PMID:24752751   PMID:24958882   PMID:25196998   PMID:25269405   PMID:25645340   PMID:25740518   PMID:25889880   PMID:26108624   PMID:26754646   PMID:26823173   PMID:27160897   PMID:27566541  
PMID:27626380   PMID:27717523   PMID:28300073   PMID:28378742   PMID:28461220   PMID:28615221   PMID:28821585   PMID:30131335   PMID:30333137   PMID:30453345   PMID:30562941   PMID:30611611  
PMID:31948107   PMID:32325033  


Genomics

Comparative Map Data
Coro1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397126,298,946 - 126,303,988 (-)NCBIGRCm39mm39
GRCm39 Ensembl7126,298,945 - 126,306,959 (-)Ensembl
GRCm387126,699,774 - 126,704,816 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7126,699,773 - 126,707,787 (-)EnsemblGRCm38mm10GRCm38
MGSCv377133,843,288 - 133,848,268 (-)NCBIGRCm37mm9NCBIm37
MGSCv367126,490,922 - 126,495,902 (-)NCBImm8
Celera7126,547,074 - 126,552,054 (-)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.25NCBI
CORO1A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1630,182,827 - 30,189,076 (+)EnsemblGRCh38hg38GRCh38
GRCh381630,183,602 - 30,189,076 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371630,194,923 - 30,200,397 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361630,102,427 - 30,107,898 (+)NCBINCBI36hg18NCBI36
Build 341630,102,448 - 30,107,898NCBI
Celera1672,594,500 - 72,599,971 (-)NCBI
Cytogenetic Map16p11.2NCBI
HuRef1627,857,375 - 27,863,041 (+)NCBIHuRef
CHM1_11631,409,355 - 31,415,021 (+)NCBICHM1_1
Coro1a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21181,295,561 - 181,300,566 (-)NCBI
Rnor_6.0 Ensembl1198,123,884 - 198,128,857 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01198,123,883 - 198,128,890 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01205,102,882 - 205,107,884 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41185,852,741 - 185,857,715 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11186,002,622 - 186,007,596 (-)NCBI
Celera1178,953,035 - 178,958,009 (-)NCBICelera
Cytogenetic Map1q36NCBI
Coro1a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554936,811,430 - 6,826,485 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554936,815,148 - 6,820,295 (-)NCBIChiLan1.0ChiLan1.0
CORO1A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11630,549,880 - 30,555,093 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1630,550,383 - 30,556,196 (+)Ensemblpanpan1.1panPan2
CORO1A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1618,161,850 - 18,167,915 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl618,160,601 - 18,167,818 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha619,740,842 - 19,746,439 (+)NCBI
ROS_Cfam_1.0618,298,321 - 18,303,918 (+)NCBI
UMICH_Zoey_3.1618,097,136 - 18,102,732 (+)NCBI
UNSW_CanFamBas_1.0618,012,545 - 18,018,141 (+)NCBI
UU_Cfam_GSD_1.0618,328,371 - 18,333,968 (+)NCBI
Coro1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344124,240,682 - 124,246,391 (-)NCBI
SpeTri2.0NW_00493650112,338,542 - 12,344,236 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CORO1A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl318,336,899 - 18,342,380 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1318,336,813 - 18,342,381 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
CORO1A
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1526,482,269 - 26,488,537 (-)NCBI
ChlSab1.1 Ensembl526,480,753 - 26,487,929 (-)Ensembl
Coro1a
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478213,106,416 - 13,111,394 (-)NCBI

Position Markers
D7Mit211  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7F3UniSTS
cM Map727.8UniSTS
Whitehead Genetic726.2UniSTS
Whitehead_YAC7 UniSTS
Coro1a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm387126,700,274 - 126,700,630UniSTSGRCm38
MGSCv377133,843,788 - 133,844,144UniSTSGRCm37
Celera7126,547,574 - 126,547,930UniSTS
Cytogenetic Map7F3UniSTS
cM Map762.5UniSTS
D7Mit82  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38751,545,191 - 51,545,394UniSTSGRCm38
MGSCv37758,800,561 - 58,800,764UniSTSGRCm37
Celera748,923,638 - 48,923,865UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map7B5UniSTS
cM Map725.0UniSTS
Whitehead Genetic724.0UniSTS
D7Nds1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38774,676,373 - 74,676,604UniSTSGRCm38
MGSCv37781,821,259 - 81,821,490UniSTSGRCm37
Celera772,117,005 - 72,117,230UniSTS
Cytogenetic Map7F3UniSTS
cM Map737.0UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76500000133900000Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719413473142366067Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753600000143600000Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)757300000134400000Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765600000126900000Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773500000143600000Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)779000000137300000Mouse
27095930Ulnl10_mulna length 10, 16 week (mouse)781200000127100000Mouse
27095903Scvln10_msacral vertebrae length 2, 10 week (mouse)781800000126900000Mouse
27226765Tibl18_mtibia length 18, 16 week (mouse)782200000126900000Mouse
27226769Tibl12_mtibia length 12, 10 week (mouse)787600000126900000Mouse
27226790Feml15_mfemur length 15, 10 week (mouse)787600000126900000Mouse
1300528Ssial3_msusceptibility to sialadenitis 3 (mouse)Not determined793792641127792834Mouse
1301478Eae26_msusceptibility to experimental allergic encephalomyelitis 26 (mouse)Not determined798565687132565775Mouse
13524850Asrq7_macoustic startle response 7 (mouse)798795739132795739Mouse
10412104Tons2_mtongue size 2 (mouse)Not determined7100238481134238481Mouse
11039524Tbbr3_mTrypanosoma brucei brucei response 3 (mouse)7101151499135151620Mouse
1301447Fembm3_mfemoral bone morphometry 3 (mouse)Not determined7101394038135394119Mouse
1357460Vtbt4_mvertebral trabecular bone trait 4 (mouse)Not determined7102094158136094307Mouse
1301105Cfld4_mcystic fibrosis lung disease 4 (mouse)Not determined7102094158136094307Mouse
1300721Cfbw3_mcystic fibrosis body weight 3 (mouse)Not determined7102094158136094307Mouse
4142312Nilac4_mnicotine induced locomotor activity 4 (mouse)Not determined7102885996136886157Mouse
5491192Mobq1_mmultigenic obesity QTL 1 (mouse)Not determined7105651440139651588Mouse
13524852Asrq7a_macoustic startle response 7a (mouse)7105750785139750785Mouse
14700684Civq1_mcerebral infarct volume QTL 1 (mouse)7110108163144108163Mouse
14700687Civq5_mcerebral infarct volume QTL 5 (mouse)7110108163144108163Mouse
14700688Civq6_mcerebral infarct volume QTL 6 (mouse)7110108163144108163Mouse
10402499Lmr21_mleishmaniasis resistance 21 (mouse)Not determined7111365511145365612Mouse
11059562Lmr21b_mleishmaniasis resistance 21b (mouse)7111365511145365612Mouse
1301898Alcp14_malcohol preference locus 14 (mouse)Not determined7111564398145441459Mouse
1302032Alcp12_malcohol preference locus 12 (mouse)Not determined7111564398145441459Mouse
1300670Sluc19_msusceptibility to lung cancer 19 (mouse)Not determined7111564398145441459Mouse
4142444Femwf5_mfemur work to failure 5 (mouse)Not determined112950524145441459Mouse
1300747Skts2_mskin tumor susceptibility 2 (mouse)Not determined7113321003145441459Mouse
38501072Stsl7_mSalmonella typhimurium susceptibility locus 7 (mouse)7116100000128900000Mouse
1300677Bmd9_mbone mineral density 9 (mouse)Not determined7117032360145441459Mouse
15092059Wogrme1_mweek one growth rate, maternal effect 1 (mouse)7117600000134500000Mouse
11059561Lmr21a_mleishmaniasis resistance 21a (mouse)7118151499128365612Mouse
1357711Adbg1_madult body growth 1 (mouse)Not determined7119094158144844577Mouse
1301773Stheal7_msoft tissue heal 7 (mouse)Not determined7119530844145441459Mouse
38501070Tip5_mtuberculosis immunophenotype 5, IFN-g level (mouse)7121000000130700000Mouse
1357613Bsbob2_mBSB obesity 2 (mouse)Not determined7122651440129217600Mouse
1301903Tlsm1_mthymic lymphoma susceptible 1 (mouse)Not determined7122651440135569172Mouse
38501066Tip2_mtuberculosis immunophenotype 2, spleen CFU (mouse)7124700000127300000Mouse
4141945Il4ppq_mIL-4 producing potential QTL (mouse)Not determined7124914439129217600Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2547
Count of miRNA genes:623
Interacting mature miRNAs:774
Transcripts:ENSMUST00000032949, ENSMUST00000106364, ENSMUST00000123511, ENSMUST00000126193, ENSMUST00000131415, ENSMUST00000133718, ENSMUST00000135087, ENSMUST00000140896, ENSMUST00000173108, ENSMUST00000173116, ENSMUST00000174579
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001301374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006507284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006507285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC124505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF047388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF143955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF427040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF495468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK040885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK075799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC002136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC053398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY198241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY236847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U89399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000032949   ⟹   ENSMUSP00000032949
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl7126,699,773 - 126,704,816 (-)Ensembl
RefSeq Acc Id: ENSMUST00000106364   ⟹   ENSMUSP00000101972
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl7126,699,773 - 126,704,220 (-)Ensembl
RefSeq Acc Id: ENSMUST00000123511
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl7126,700,991 - 126,702,095 (-)Ensembl
RefSeq Acc Id: ENSMUST00000126193
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl7126,702,832 - 126,704,753 (-)Ensembl
RefSeq Acc Id: ENSMUST00000131415   ⟹   ENSMUSP00000117931
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl7126,701,347 - 126,704,754 (-)Ensembl
RefSeq Acc Id: ENSMUST00000133718
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl7126,700,311 - 126,701,227 (-)Ensembl
RefSeq Acc Id: ENSMUST00000135087   ⟹   ENSMUSP00000115960
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl7126,701,891 - 126,704,547 (-)Ensembl
RefSeq Acc Id: ENSMUST00000140896
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl7126,701,330 - 126,702,472 (-)Ensembl
RefSeq Acc Id: ENSMUST00000173108   ⟹   ENSMUSP00000134123
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl7126,699,881 - 126,703,173 (-)Ensembl
RefSeq Acc Id: ENSMUST00000173116   ⟹   ENSMUSP00000133555
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl7126,701,902 - 126,707,787 (-)Ensembl
RefSeq Acc Id: ENSMUST00000174579
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl7126,700,355 - 126,701,260 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205515   ⟹   ENSMUSP00000146177
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl7126,700,992 - 126,703,174 (-)Ensembl
RefSeq Acc Id: NM_001301374   ⟹   NP_001288303
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397126,298,946 - 126,303,392 (-)NCBI
GRCm387126,699,774 - 126,704,220 (-)NCBI
Celera7126,547,074 - 126,552,116 (-)NCBI
Sequence:
RefSeq Acc Id: NM_009898   ⟹   NP_034028
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397126,298,946 - 126,303,988 (-)NCBI
GRCm387126,699,774 - 126,704,816 (-)NCBI
MGSCv377133,843,288 - 133,848,268 (-)RGD
Celera7126,547,074 - 126,552,116 (-)NCBI
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006507284   ⟹   XP_006507347
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397126,298,946 - 126,303,983 (-)NCBI
GRCm387126,699,774 - 126,704,814 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006507285   ⟹   XP_006507348
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397126,298,946 - 126,303,830 (-)NCBI
GRCm387126,699,774 - 126,704,658 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_034028   ⟸   NM_009898
- Peptide Label: isoform 1
- UniProtKB: O89053 (UniProtKB/Swiss-Prot),   Q3U1N0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006507347   ⟸   XM_006507284
- Peptide Label: isoform X1
- UniProtKB: O89053 (UniProtKB/Swiss-Prot),   Q3U1N0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006507348   ⟸   XM_006507285
- Peptide Label: isoform X1
- UniProtKB: O89053 (UniProtKB/Swiss-Prot),   Q3U1N0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001288303   ⟸   NM_001301374
- Peptide Label: isoform 1
- UniProtKB: O89053 (UniProtKB/Swiss-Prot),   Q3U1N0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000032949   ⟸   ENSMUST00000032949
RefSeq Acc Id: ENSMUSP00000146177   ⟸   ENSMUST00000205515
RefSeq Acc Id: ENSMUSP00000117931   ⟸   ENSMUST00000131415
RefSeq Acc Id: ENSMUSP00000101972   ⟸   ENSMUST00000106364
RefSeq Acc Id: ENSMUSP00000115960   ⟸   ENSMUST00000135087
RefSeq Acc Id: ENSMUSP00000133555   ⟸   ENSMUST00000173116
RefSeq Acc Id: ENSMUSP00000134123   ⟸   ENSMUST00000173108
Protein Domains
WD_REPEATS_REGION

Promoters
RGD ID:8665571
Promoter ID:EPDNEW_M10817
Type:initiation region
Name:Coro1a_1
Description:Mus musculus coronin, actin binding protein 1A , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm387126,704,753 - 126,704,813EPDNEW
RGD ID:6848851
Promoter ID:MM_TRO:9197
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Lung,   Spleen
Transcripts:MTR001288.7.3284.6
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367133,843,624 - 133,844,124 (-)MPROMDB
RGD ID:6840869
Promoter ID:MM_KWN:52696
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Spleen
Transcripts:OTTMUST00000061739
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367133,844,646 - 133,845,487 (-)MPROMDB
RGD ID:6840868
Promoter ID:MM_KWN:52697
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Lung,   Spleen
Transcripts:OTTMUST00000061737
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367133,845,696 - 133,846,972 (-)MPROMDB
RGD ID:6840866
Promoter ID:MM_KWN:52698
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Lung,   Spleen
Transcripts:ENSMUST00000106364,   OTTMUST00000061732,   OTTMUST00000061734,   OTTMUST00000061735,   OTTMUST00000061736
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367133,847,956 - 133,848,456 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1345961 AgrOrtholog
Ensembl Genes ENSMUSG00000030707 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000032949 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000101972 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000115960 UniProtKB/TrEMBL
  ENSMUSP00000117931 UniProtKB/TrEMBL
  ENSMUSP00000133555 UniProtKB/TrEMBL
  ENSMUSP00000134123 UniProtKB/TrEMBL
  ENSMUSP00000146177 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000032949 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000106364 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000131415 UniProtKB/TrEMBL
  ENSMUST00000135087 UniProtKB/TrEMBL
  ENSMUST00000173108 UniProtKB/TrEMBL
  ENSMUST00000173116 UniProtKB/TrEMBL
  ENSMUST00000205515 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro CORO1A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Coronin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF1899 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Trimer_CC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:12721 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1345961 ENTREZGENE
NCBI Gene 12721 ENTREZGENE
PANTHER PTHR10856 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10856:SF18 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DUF1899 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Trimer_CC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Coro1a PhenoGen
PROSITE WD_REPEATS_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART DUF1899 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50978 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0U1RPY8_MOUSE UniProtKB/TrEMBL
  COR1A_MOUSE UniProtKB/Swiss-Prot
  D3YW57_MOUSE UniProtKB/TrEMBL
  D3YXM2_MOUSE UniProtKB/TrEMBL
  G3UX53_MOUSE UniProtKB/TrEMBL
  G3UYK8_MOUSE UniProtKB/TrEMBL
  O89053 ENTREZGENE
  Q3T9L1_MOUSE UniProtKB/TrEMBL
  Q3U1N0 ENTREZGENE, UniProtKB/TrEMBL
  Q3U232_MOUSE UniProtKB/TrEMBL
  Q3U9K3_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q7TMU0 UniProtKB/Swiss-Prot
  Q9R1Y8 UniProtKB/Swiss-Prot
  Q9R288 UniProtKB/Swiss-Prot