Septin1 (septin 1) - Rat Genome Database

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Gene: Septin1 (septin 1) Mus musculus
Analyze
Symbol: Septin1
Name: septin 1
RGD ID: 1316278
MGI Page MGI
Description: Predicted to enable GTPase activity; identical protein binding activity; and molecular adaptor activity. Acts upstream of or within meiotic metaphase chromosome alignment and spindle assembly involved in female meiosis. Located in meiotic spindle and midbody. Is expressed in brain; cochlea; and thymus primordium. Orthologous to human SEPTIN1 (septin 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Diff; Diff6; differentiation 6 (deoxyguanosine triphosphate triphosphohydrolase); differentiation protein 6; peanut-like protein 3; PNU; Pnutl3; Sep; Sept1; septin-1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397126,811,881 - 126,832,157 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7126,813,619 - 126,832,302 (-)EnsemblGRCm39 Ensembl
GRCm387127,212,709 - 127,232,985 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7127,214,447 - 127,233,130 (-)EnsemblGRCm38mm10GRCm38
MGSCv377134,357,956 - 134,361,959 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367127,005,598 - 127,009,601 (-)NCBIMGSCv36mm8
Celera7127,063,210 - 127,067,214 (-)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.39NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:2174398   PMID:8889548   PMID:12477932   PMID:14610273   PMID:16602821   PMID:18799693   PMID:19043408   PMID:21267068   PMID:21677750   PMID:21873635   PMID:21932310   PMID:22575789  
PMID:30196744   PMID:32146512   PMID:34321999  


Genomics

Comparative Map Data
Septin1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397126,811,881 - 126,832,157 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7126,813,619 - 126,832,302 (-)EnsemblGRCm39 Ensembl
GRCm387127,212,709 - 127,232,985 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7127,214,447 - 127,233,130 (-)EnsemblGRCm38mm10GRCm38
MGSCv377134,357,956 - 134,361,959 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367127,005,598 - 127,009,601 (-)NCBIMGSCv36mm8
Celera7127,063,210 - 127,067,214 (-)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.39NCBI
SEPTIN1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381630,378,135 - 30,382,815 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1630,378,135 - 30,395,991 (-)EnsemblGRCh38hg38GRCh38
GRCh371630,389,456 - 30,394,136 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361630,296,957 - 30,301,672 (-)NCBINCBI36Build 36hg18NCBI36
Build 341630,296,957 - 30,301,672NCBI
Celera1629,904,429 - 29,909,188 (+)NCBICelera
Cytogenetic Map16p11.2NCBI
HuRef1627,951,218 - 27,955,945 (-)NCBIHuRef
CHM1_11631,706,508 - 31,711,226 (-)NCBICHM1_1
T2T-CHM13v2.01630,764,338 - 30,769,019 (-)NCBIT2T-CHM13v2.0
Septin1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81191,263,200 - 191,267,086 (-)NCBIGRCr8
mRatBN7.21181,832,700 - 181,836,566 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1181,832,701 - 181,836,566 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1190,183,588 - 190,187,454 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01197,369,676 - 197,373,542 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01190,038,210 - 190,042,079 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01198,658,744 - 198,662,610 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1198,658,745 - 198,662,610 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01205,652,475 - 205,656,341 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41186,474,714 - 186,478,580 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11186,624,595 - 186,628,461 (-)NCBI
Celera1179,484,367 - 179,488,232 (-)NCBICelera
Cytogenetic Map1q37NCBI
Septin1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554937,304,472 - 7,312,185 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554937,304,472 - 7,309,022 (-)NCBIChiLan1.0ChiLan1.0
SEPTIN1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21833,583,330 - 33,593,399 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11638,384,787 - 38,402,163 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01624,586,711 - 24,591,587 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11630,751,869 - 30,755,133 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1630,750,665 - 30,755,345 (-)Ensemblpanpan1.1panPan2
SEPTIN1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1617,714,929 - 17,718,972 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl617,715,408 - 17,719,159 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha619,289,544 - 19,293,553 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0617,846,389 - 17,850,406 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl617,846,585 - 17,850,402 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1617,646,593 - 17,650,610 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0617,562,034 - 17,566,041 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0617,877,697 - 17,881,714 (+)NCBIUU_Cfam_GSD_1.0
Septin1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344124,749,372 - 124,762,085 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650112,843,820 - 12,851,032 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650112,847,236 - 12,852,963 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SEPTIN1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl317,924,651 - 17,937,947 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1317,924,651 - 17,937,949 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2318,359,300 - 18,376,616 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SEPTIN1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1527,055,239 - 27,059,749 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl527,055,538 - 27,059,723 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660682,461,126 - 2,465,801 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Septin1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478213,550,185 - 13,553,480 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478213,549,862 - 13,553,557 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Septin1
1081 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357460Vtbt4_mvertebral trabecular bone trait 4 (mouse)Not determined7101693381135693530Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
11059561Lmr21a_mleishmaniasis resistance 21a (mouse)7117750722127967336Mouse
38501066Tip2_mtuberculosis immunophenotype 2, spleen CFU (mouse)7124299223126899172Mouse
11059562Lmr21b_mleishmaniasis resistance 21b (mouse)7110967235144967336Mouse
1302032Alcp12_malcohol preference locus 12 (mouse)Not determined7111166122144995196Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
4141945Il4ppq_mIL-4 producing potential QTL (mouse)Not determined7124513662128819324Mouse
11039524Tbbr3_mTrypanosoma brucei brucei response 3 (mouse)7100750722134750843Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
4142444Femwf5_mfemur work to failure 5 (mouse)Not determined112552248144995196Mouse
1301447Fembm3_mfemoral bone morphometry 3 (mouse)Not determined7100993261134993342Mouse
10412104Tons2_mtongue size 2 (mouse)Not determined799837716133837716Mouse
1300677Bmd9_mbone mineral density 9 (mouse)Not determined7116634089144995196Mouse
4142312Nilac4_mnicotine induced locomotor activity 4 (mouse)Not determined7102485219136485380Mouse
1300747Skts2_mskin tumor susceptibility 2 (mouse)Not determined7112922733144995196Mouse
1301898Alcp14_malcohol preference locus 14 (mouse)Not determined7111166122144995196Mouse
38501072Stsl7_mSalmonella typhimurium susceptibility locus 7 (mouse)7115699235128501724Mouse
1357711Adbg1_madult body growth 1 (mouse)Not determined7118693381144398314Mouse
1301903Tlsm1_mthymic lymphoma susceptible 1 (mouse)Not determined7122250663135170901Mouse
10402499Lmr21_mleishmaniasis resistance 21 (mouse)Not determined7110967235144967336Mouse
1301773Stheal7_msoft tissue heal 7 (mouse)Not determined7119132573144995196Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
1301105Cfld4_mcystic fibrosis lung disease 4 (mouse)Not determined7101693381135693530Mouse
1300721Cfbw3_mcystic fibrosis body weight 3 (mouse)Not determined7101693381135693530Mouse
1300528Ssial3_msusceptibility to sialadenitis 3 (mouse)Not determined793391848127392041Mouse
5491192Mobq1_mmultigenic obesity QTL 1 (mouse)Not determined7105250663139250811Mouse
14700684Civq1_mcerebral infarct volume QTL 1 (mouse)7109707335143707335Mouse
1300670Sluc19_msusceptibility to lung cancer 19 (mouse)Not determined7111166122144995196Mouse
14700687Civq5_mcerebral infarct volume QTL 5 (mouse)7109707335143707335Mouse
14700688Civq6_mcerebral infarct volume QTL 6 (mouse)7109707335143707335Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
1301478Eae26_msusceptibility to experimental allergic encephalomyelitis 26 (mouse)Not determined798164922132165010Mouse
1357613Bsbob2_mBSB obesity 2 (mouse)Not determined7122250663128819324Mouse
13524852Asrq7a_macoustic startle response 7a (mouse)7105350008139350008Mouse
13524850Asrq7_macoustic startle response 7 (mouse)798394974132394974Mouse
15092059Wogrme1_mweek one growth rate, maternal effect 1 (mouse)7117199227134101729Mouse


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_017461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011241862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003946520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC122537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC133494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI465014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV507599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW487826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY974598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB610735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC140998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC145081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX523183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M37030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000106313   ⟹   ENSMUSP00000101920
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7126,813,815 - 126,817,475 (-)Ensembl
GRCm38.p6 Ensembl7127,214,643 - 127,218,303 (-)Ensembl
Ensembl Acc Id: ENSMUST00000106314   ⟹   ENSMUSP00000101921
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7126,813,634 - 126,817,670 (-)Ensembl
GRCm38.p6 Ensembl7127,214,462 - 127,218,498 (-)Ensembl
Ensembl Acc Id: ENSMUST00000131208
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7126,813,619 - 126,814,297 (-)Ensembl
GRCm38.p6 Ensembl7127,214,447 - 127,215,125 (-)Ensembl
Ensembl Acc Id: ENSMUST00000133591
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7126,814,138 - 126,816,211 (-)Ensembl
GRCm38.p6 Ensembl7127,214,966 - 127,217,039 (-)Ensembl
Ensembl Acc Id: ENSMUST00000133733
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7126,815,937 - 126,817,598 (-)Ensembl
GRCm38.p6 Ensembl7127,216,765 - 127,218,426 (-)Ensembl
Ensembl Acc Id: ENSMUST00000133913   ⟹   ENSMUSP00000145906
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7126,815,900 - 126,831,818 (-)Ensembl
GRCm38.p6 Ensembl7127,216,728 - 127,232,646 (-)Ensembl
Ensembl Acc Id: ENSMUST00000138541
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7126,816,144 - 126,817,403 (-)Ensembl
GRCm38.p6 Ensembl7127,216,972 - 127,218,231 (-)Ensembl
Ensembl Acc Id: ENSMUST00000142356   ⟹   ENSMUSP00000114468
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7126,815,057 - 126,817,562 (-)Ensembl
GRCm38.p6 Ensembl7127,215,885 - 127,218,390 (-)Ensembl
Ensembl Acc Id: ENSMUST00000152267   ⟹   ENSMUSP00000146307
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7126,813,943 - 126,817,643 (-)Ensembl
GRCm38.p6 Ensembl7127,214,771 - 127,218,471 (-)Ensembl
Ensembl Acc Id: ENSMUST00000205570
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7126,831,590 - 126,832,302 (-)Ensembl
GRCm38.p6 Ensembl7127,232,418 - 127,233,130 (-)Ensembl
RefSeq Acc Id: NM_017461   ⟹   NP_059489
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397126,813,614 - 126,817,629 (-)NCBI
GRCm387127,214,442 - 127,218,445 (-)NCBI
MGSCv377134,357,956 - 134,361,959 (-)RGD
Celera7127,063,210 - 127,067,214 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006508029   ⟹   XP_006508092
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397126,811,881 - 126,818,433 (-)NCBI
GRCm387127,212,709 - 127,218,872 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006508030   ⟹   XP_006508093
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397126,811,881 - 126,817,615 (-)NCBI
GRCm387127,212,709 - 127,218,745 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006508031   ⟹   XP_006508094
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397126,812,950 - 126,832,157 (-)NCBI
GRCm387127,213,778 - 127,232,985 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011241862   ⟹   XP_011240164
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397126,811,881 - 126,817,930 (-)NCBI
GRCm387127,212,709 - 127,218,758 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036153250   ⟹   XP_036009143
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397126,814,837 - 126,817,952 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036153251   ⟹   XP_036009144
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397126,811,881 - 126,815,950 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003946520
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397126,813,614 - 126,817,952 (-)NCBI
GRCm387127,214,442 - 127,218,779 (-)NCBI
Sequence:
RefSeq Acc Id: NP_059489   ⟸   NM_017461
- UniProtKB: B2RU74 (UniProtKB/Swiss-Prot),   P42209 (UniProtKB/Swiss-Prot),   A0A0U1RQA1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006508094   ⟸   XM_006508031
- Peptide Label: isoform X2
- UniProtKB: D3Z3V3 (UniProtKB/TrEMBL),   A0A0U1RQA1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006508092   ⟸   XM_006508029
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006508093   ⟸   XM_006508030
- Peptide Label: isoform X2
- UniProtKB: D3Z3V3 (UniProtKB/TrEMBL),   A0A0U1RQA1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011240164   ⟸   XM_011241862
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSMUSP00000146307   ⟸   ENSMUST00000152267
Ensembl Acc Id: ENSMUSP00000101920   ⟸   ENSMUST00000106313
Ensembl Acc Id: ENSMUSP00000101921   ⟸   ENSMUST00000106314
Ensembl Acc Id: ENSMUSP00000145906   ⟸   ENSMUST00000133913
Ensembl Acc Id: ENSMUSP00000114468   ⟸   ENSMUST00000142356
RefSeq Acc Id: XP_036009144   ⟸   XM_036153251
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036009143   ⟸   XM_036153250
- Peptide Label: isoform X3
Protein Domains
Septin-type G

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P42209-F1-model_v2 AlphaFold P42209 1-366 view protein structure

Promoters
RGD ID:8665651
Promoter ID:EPDNEW_M10856
Type:initiation region
Name:Sept1_1
Description:Mus musculus septin 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm387127,218,441 - 127,218,501EPDNEW
RGD ID:6841998
Promoter ID:MM_KWN:52758
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell,   Kidney,   Liver,   Lung,   Spleen
Transcripts:OTTMUST00000052676
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367134,358,511 - 134,359,032 (-)MPROMDB
RGD ID:6841995
Promoter ID:MM_KWN:52759
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:OTTMUST00000052675
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367134,361,286 - 134,361,786 (-)MPROMDB
RGD ID:6841999
Promoter ID:MM_KWN:52760
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung,   Spleen
Transcripts:ENSMUST00000000497,   ENSMUST00000106313,   ENSMUST00000106314,   OTTMUST00000052672,   OTTMUST00000052673,   OTTMUST00000052674,   OTTMUST00000052677,   OTTMUST00000052678
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367134,361,596 - 134,362,096 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1858916 AgrOrtholog
Ensembl Genes ENSMUSG00000000486 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000106313 ENTREZGENE
  ENSMUST00000106313.8 UniProtKB/TrEMBL
  ENSMUST00000106314 ENTREZGENE
  ENSMUST00000106314.8 UniProtKB/Swiss-Prot
  ENSMUST00000133913.8 UniProtKB/TrEMBL
  ENSMUST00000142356.3 UniProtKB/TrEMBL
  ENSMUST00000152267.8 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro G_SEPTIN_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Septin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:54204 UniProtKB/Swiss-Prot
MGD MGI:1858916 ENTREZGENE
NCBI Gene 54204 ENTREZGENE
PANTHER SEPTIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Septin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Septin1 PhenoGen
PIRSF Septin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_SEPTIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0U1RPA8_MOUSE UniProtKB/TrEMBL
  A0A0U1RQA1 ENTREZGENE, UniProtKB/TrEMBL
  B2RU74 ENTREZGENE
  D3YVG1_MOUSE UniProtKB/TrEMBL
  D3Z3V3 ENTREZGENE, UniProtKB/TrEMBL
  P42209 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary B2RU74 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-27 Septin1  septin 1  Sept1  septin 1  Symbol and/or name change 5135510 APPROVED