Gene: Ppfia1 (protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1) Mus musculus
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Symbol:
Ppfia1
Name:
protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
RGD ID:
1319112
MGI Page
MGI
Description:
Acts upstream of or within negative regulation of stress fiber assembly. Predicted to be located in several cellular components, including axon; dendrite; and focal adhesion. Predicted to be part of protein-containing complex. Predicted to be active in Schaffer collateral - CA1 synapse; presynaptic active zone; and spine apparatus. Is expressed in several structures, including blood vessel endothelium; central nervous system; genitourinary system; retina; and spleen. Orthologous to human PPFIA1 (PTPRF interacting protein alpha 1).
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
C030014K08Rik; C87158; LIP.1; LIP1; liprin; liprin-alpha-1; Liprin-alpha1; MGC189815; MGC189929; protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein, alpha 1
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
PPFIA1 (PTPRF interacting protein alpha 1) HGNC
EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Rattus norvegicus (Norway rat):
Ppfia1 (PTPRF interacting protein alpha 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Ppfia1 (PTPRF interacting protein alpha 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
PPFIA1 (PTPRF interacting protein alpha 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
PPFIA1 (PTPRF interacting protein alpha 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Ppfia1 (PTPRF interacting protein alpha 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
PPFIA1 (PTPRF interacting protein alpha 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
PPFIA1 (PTPRF interacting protein alpha 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Ppfia1 (PTPRF interacting protein alpha 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Other homologs 2
Homo sapiens (human):
PPFIA4 (PTPRF interacting protein alpha 4) HGNC
OrthoMCL
Homo sapiens (human):
PPFIA3 (PTPRF interacting protein alpha 3) HGNC
OrthoMCL
Homo sapiens (human):
PPFIA2 (PTPRF interacting protein alpha 2) HGNC
OrthoMCL
Alliance orthologs 3
Rattus norvegicus (Norway rat):
Ppfia1 (PTPRF interacting protein alpha 1)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Homo sapiens (human):
PPFIA1 (PTPRF interacting protein alpha 1)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
ppfia1 (protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1)
Alliance
DIOPT (Ensembl Compara|OrthoFinder|PhylomeDB|ZFIN)
Drosophila melanogaster (fruit fly):
Liprin-alpha
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Caenorhabditis elegans (roundworm):
syd-2
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
ppfia1
Alliance
DIOPT (Ensembl Compara|OMA|OrthoFinder|PANTHER)
Latest Assembly:
GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 7 144,030,492 - 144,107,497 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 7 144,030,495 - 144,107,466 (-) Ensembl GRCm39 Ensembl GRCm38 7 144,476,755 - 144,553,762 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 7 144,476,758 - 144,553,729 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 7 151,662,883 - 151,739,591 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 7 144,286,155 - 144,363,119 (-) NCBI MGSCv36 mm8 Celera 7 144,239,654 - 144,316,313 (-) NCBI Celera Cytogenetic Map 7 F5 NCBI cM Map 7 88.85 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Ppfia1 Mouse 1,2-dimethylhydrazine affects expression EXP 6480464 1,2-Dimethylhydrazine affects the expression of PPFIA1 mRNA CTD PMID:22206623 Ppfia1 Mouse 14-Deoxy-11,12-didehydroandrographolide increases expression ISO RGD:1319111 6480464 14-deoxy-11,12-didehydroandrographolide results in increased expression of PPFIA1 mRNA CTD PMID:22101062 Ppfia1 Mouse 17beta-estradiol increases expression ISO RGD:1319111 6480464 Estradiol results in increased expression of PPFIA1 mRNA CTD PMID:31614463 Ppfia1 Mouse 2,2',4,4'-Tetrabromodiphenyl ether decreases expression ISO RGD:1319111 6480464 2,2',4,4'-tetrabromodiphenyl ether results in decreased expression of PPFIA1 protein CTD PMID:31675489 Ppfia1 Mouse 2,3,7,8-tetrachlorodibenzodioxine increases expression EXP 6480464 Tetrachlorodibenzodioxin results in increased expression of PPFIA1 mRNA CTD PMID:17942748 Ppfia1 Mouse 2,3,7,8-tetrachlorodibenzodioxine decreases expression ISO RGD:1309009 6480464 Tetrachlorodibenzodioxin results in decreased expression of PPFIA1 mRNA CTD PMID:33387578 Ppfia1 Mouse 2,4,6-tribromophenol decreases expression ISO RGD:1319111 6480464 2,4,6-tribromophenol results in decreased expression of PPFIA1 mRNA CTD PMID:31675489 Ppfia1 Mouse 2,4-dinitrotoluene affects expression ISO RGD:1309009 6480464 2,4-dinitrotoluene affects the expression of PPFIA1 mRNA CTD PMID:21346803 Ppfia1 Mouse 2,6-dinitrotoluene affects expression ISO RGD:1309009 6480464 2,6-dinitrotoluene affects the expression of PPFIA1 mRNA CTD PMID:21346803 Ppfia1 Mouse 3,3',5,5'-tetrabromobisphenol A decreases expression ISO RGD:1319111 6480464 tetrabromobisphenol A results in decreased expression of PPFIA1 protein CTD PMID:31675489 Ppfia1 Mouse acrolein multiple interactions ISO RGD:1319111 6480464 [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of more ... CTD PMID:32699268 Ppfia1 Mouse all-trans-retinoic acid decreases expression ISO RGD:1319111 6480464 Tretinoin results in decreased expression of PPFIA1 mRNA CTD PMID:15498508 Ppfia1 Mouse alpha-pinene multiple interactions ISO RGD:1319111 6480464 [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of more ... CTD PMID:32699268 Ppfia1 Mouse Aroclor 1254 decreases expression EXP 6480464 Chlorodiphenyl (54% Chlorine) results in decreased expression of PPFIA1 mRNA CTD PMID:23650126 Ppfia1 Mouse arsane affects methylation ISO RGD:1319111 6480464 Arsenic affects the methylation of PPFIA1 gene CTD PMID:25304211 Ppfia1 Mouse arsenic atom affects methylation ISO RGD:1319111 6480464 Arsenic affects the methylation of PPFIA1 gene CTD PMID:25304211 Ppfia1 Mouse arsenite(3-) multiple interactions ISO RGD:1319111 6480464 arsenite inhibits the reaction [G3BP1 protein binds to PPFIA1 mRNA] CTD PMID:32406909 Ppfia1 Mouse atrazine decreases expression ISO RGD:1319111 6480464 Atrazine results in decreased expression of PPFIA1 mRNA CTD PMID:22378314 Ppfia1 Mouse benzo[a]pyrene affects methylation ISO RGD:1319111 6480464 Benzo(a)pyrene affects the methylation of PPFIA1 intron CTD PMID:30157460 Ppfia1 Mouse benzo[a]pyrene increases methylation ISO RGD:1319111 6480464 Benzo(a)pyrene results in increased methylation of PPFIA1 3' UTR CTD PMID:27901495 Ppfia1 Mouse benzo[a]pyrene diol epoxide I decreases expression ISO RGD:1319111 6480464 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide results in decreased expression of PPFIA1 mRNA CTD PMID:19150397 Ppfia1 Mouse bis(2-ethylhexyl) phthalate decreases expression EXP 6480464 Diethylhexyl Phthalate results in decreased expression of PPFIA1 mRNA CTD PMID:33754040 Ppfia1 Mouse bisphenol A affects expression ISO RGD:1309009 6480464 bisphenol A affects the expression of PPFIA1 mRNA CTD PMID:25181051 Ppfia1 Mouse bisphenol A decreases expression ISO RGD:1319111 6480464 bisphenol A results in decreased expression of PPFIA1 protein CTD PMID:31675489 Ppfia1 Mouse bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of PPFIA1 mRNA CTD PMID:38074096 Ppfia1 Mouse bisphenol A decreases expression ISO RGD:1309009 6480464 bisphenol A results in decreased expression of PPFIA1 mRNA CTD PMID:33296240 Ppfia1 Mouse butanal decreases expression ISO RGD:1319111 6480464 butyraldehyde results in decreased expression of PPFIA1 mRNA CTD PMID:26079696 Ppfia1 Mouse caffeine affects phosphorylation ISO RGD:1319111 6480464 Caffeine affects the phosphorylation of PPFIA1 protein CTD PMID:35688186 Ppfia1 Mouse chlorpyrifos increases expression EXP 6480464 Chlorpyrifos results in increased expression of PPFIA1 mRNA CTD PMID:37019170 Ppfia1 Mouse cobalt dichloride increases expression ISO RGD:1319111 6480464 cobaltous chloride results in increased expression of PPFIA1 mRNA CTD PMID:19376846 Ppfia1 Mouse copper(II) sulfate increases expression ISO RGD:1319111 6480464 Copper Sulfate results in increased expression of PPFIA1 mRNA CTD PMID:19549813 Ppfia1 Mouse coumarin decreases phosphorylation ISO RGD:1319111 6480464 coumarin results in decreased phosphorylation of PPFIA1 protein CTD PMID:35688186 Ppfia1 Mouse cyclosporin A increases expression ISO RGD:1319111 6480464 Cyclosporine results in increased expression of PPFIA1 mRNA CTD PMID:20106945 Ppfia1 Mouse decabromodiphenyl ether decreases expression ISO RGD:1319111 6480464 decabromobiphenyl ether results in decreased expression of PPFIA1 protein CTD PMID:31675489 Ppfia1 Mouse Dibutyl phosphate affects expression ISO RGD:1319111 6480464 di-n-butylphosphoric acid affects the expression of PPFIA1 mRNA CTD PMID:37042841 Ppfia1 Mouse doxorubicin decreases expression ISO RGD:1319111 6480464 Doxorubicin results in decreased expression of PPFIA1 mRNA CTD PMID:29803840 Ppfia1 Mouse epoxiconazole decreases expression EXP 6480464 epoxiconazole results in decreased expression of PPFIA1 mRNA CTD PMID:35436446 Ppfia1 Mouse fenthion decreases expression EXP 6480464 Fenthion results in decreased expression of PPFIA1 mRNA CTD PMID:34813904 Ppfia1 Mouse fipronil increases expression ISO RGD:1309009 6480464 fipronil results in increased expression of PPFIA1 mRNA CTD PMID:34044035 Ppfia1 Mouse folic acid decreases expression EXP 6480464 Folic Acid results in decreased expression of PPFIA1 mRNA CTD PMID:25629700 Ppfia1 Mouse gentamycin decreases expression ISO RGD:1309009 6480464 Gentamicins results in decreased expression of PPFIA1 mRNA CTD PMID:33387578 Ppfia1 Mouse ivermectin decreases expression ISO RGD:1319111 6480464 Ivermectin results in decreased expression of PPFIA1 protein CTD PMID:32959892 Ppfia1 Mouse lead(0) decreases expression ISO RGD:1319111 6480464 Lead results in decreased expression of PPFIA1 mRNA CTD PMID:19921347 Ppfia1 Mouse methidathion decreases expression EXP 6480464 methidathion results in decreased expression of PPFIA1 mRNA CTD PMID:34813904 Ppfia1 Mouse methylseleninic acid affects expression ISO RGD:1319111 6480464 methylselenic acid affects the expression of PPFIA1 mRNA CTD PMID:14617803 Ppfia1 Mouse NS-398 increases expression ISO RGD:1319111 6480464 N-(2-cyclohexyloxy-4-nitrophenyl)methanesulfonamide results in increased expression of PPFIA1 mRNA CTD PMID:11494140 Ppfia1 Mouse ozone multiple interactions ISO RGD:1319111 6480464 [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of more ... CTD PMID:32699268|PMID:35430440 Ppfia1 Mouse p-chloromercuribenzoic acid decreases expression ISO RGD:1319111 6480464 p-Chloromercuribenzoic Acid results in decreased expression of PPFIA1 mRNA CTD PMID:27188386 Ppfia1 Mouse paracetamol increases expression ISO RGD:1319111 6480464 Acetaminophen results in increased expression of PPFIA1 mRNA CTD PMID:21420995|PMID:22230336|PMID:29067470 Ppfia1 Mouse perfluorooctane-1-sulfonic acid multiple interactions EXP 6480464 [perfluorooctane sulfonic acid co-treated with Pectins] results in decreased expression of PPFIA1 mRNA CTD PMID:36331819 Ppfia1 Mouse sodium arsenite increases expression ISO RGD:1319111 6480464 sodium arsenite results in increased expression of PPFIA1 mRNA CTD PMID:38568856 Ppfia1 Mouse sunitinib increases expression ISO RGD:1319111 6480464 Sunitinib results in increased expression of PPFIA1 mRNA CTD PMID:31533062 Ppfia1 Mouse tamibarotene decreases expression ISO RGD:1319111 6480464 tamibarotene results in decreased expression of PPFIA1 mRNA CTD PMID:15498508 Ppfia1 Mouse tetrachloromethane decreases expression ISO RGD:1309009 6480464 Carbon Tetrachloride results in decreased expression of PPFIA1 mRNA CTD PMID:33387578 Ppfia1 Mouse thiram increases expression ISO RGD:1319111 6480464 Thiram results in increased expression of PPFIA1 mRNA CTD PMID:38568856 Ppfia1 Mouse titanium dioxide decreases methylation EXP 6480464 titanium dioxide results in decreased methylation of PPFIA1 gene CTD PMID:35295148 Ppfia1 Mouse triptonide decreases expression EXP 6480464 triptonide results in decreased expression of PPFIA1 mRNA CTD PMID:33045310 Ppfia1 Mouse tungsten decreases expression EXP 6480464 Tungsten results in decreased expression of PPFIA1 mRNA CTD PMID:30912803 Ppfia1 Mouse vinclozolin decreases expression ISO RGD:1309009 6480464 vinclozolin results in decreased expression of PPFIA1 mRNA CTD PMID:18042343 Ppfia1 Mouse vinclozolin increases expression ISO RGD:1309009 6480464 vinclozolin results in increased expression of PPFIA1 mRNA CTD PMID:23034163 Ppfia1 Mouse vorinostat decreases expression ISO RGD:1319111 6480464 vorinostat results in decreased expression of PPFIA1 mRNA CTD PMID:27188386
1,2-dimethylhydrazine (EXP) 14-Deoxy-11,12-didehydroandrographolide (ISO) 17beta-estradiol (ISO) 2,2',4,4'-Tetrabromodiphenyl ether (ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2,4,6-tribromophenol (ISO) 2,4-dinitrotoluene (ISO) 2,6-dinitrotoluene (ISO) 3,3',5,5'-tetrabromobisphenol A (ISO) acrolein (ISO) all-trans-retinoic acid (ISO) alpha-pinene (ISO) Aroclor 1254 (EXP) arsane (ISO) arsenic atom (ISO) arsenite(3-) (ISO) atrazine (ISO) benzo[a]pyrene (ISO) benzo[a]pyrene diol epoxide I (ISO) bis(2-ethylhexyl) phthalate (EXP) bisphenol A (EXP,ISO) butanal (ISO) caffeine (ISO) chlorpyrifos (EXP) cobalt dichloride (ISO) copper(II) sulfate (ISO) coumarin (ISO) cyclosporin A (ISO) decabromodiphenyl ether (ISO) Dibutyl phosphate (ISO) doxorubicin (ISO) epoxiconazole (EXP) fenthion (EXP) fipronil (ISO) folic acid (EXP) gentamycin (ISO) ivermectin (ISO) lead(0) (ISO) methidathion (EXP) methylseleninic acid (ISO) NS-398 (ISO) ozone (ISO) p-chloromercuribenzoic acid (ISO) paracetamol (ISO) perfluorooctane-1-sulfonic acid (EXP) sodium arsenite (ISO) sunitinib (ISO) tamibarotene (ISO) tetrachloromethane (ISO) thiram (ISO) titanium dioxide (EXP) triptonide (EXP) tungsten (EXP) vinclozolin (ISO) vorinostat (ISO)
Ppfia1 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 7 144,030,492 - 144,107,497 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 7 144,030,495 - 144,107,466 (-) Ensembl GRCm39 Ensembl GRCm38 7 144,476,755 - 144,553,762 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 7 144,476,758 - 144,553,729 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 7 151,662,883 - 151,739,591 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 7 144,286,155 - 144,363,119 (-) NCBI MGSCv36 mm8 Celera 7 144,239,654 - 144,316,313 (-) NCBI Celera Cytogenetic Map 7 F5 NCBI cM Map 7 88.85 NCBI
PPFIA1 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 11 70,270,690 - 70,384,396 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 11 70,270,690 - 70,385,312 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 11 70,116,796 - 70,230,502 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 11 69,794,471 - 69,908,150 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 11 69,794,470 - 69,902,146 NCBI Celera 11 67,376,164 - 67,491,698 (+) NCBI Celera Cytogenetic Map 11 q13.3 NCBI HuRef 11 66,374,574 - 66,491,659 (+) NCBI HuRef CHM1_1 11 69,999,952 - 70,114,102 (+) NCBI CHM1_1 T2T-CHM13v2.0 11 70,285,642 - 70,404,818 (+) NCBI T2T-CHM13v2.0
Ppfia1 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 1 209,070,608 - 209,147,740 (-) NCBI GRCr8 mRatBN7.2 1 199,641,277 - 199,718,371 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 1 199,641,277 - 199,717,277 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 1 208,024,622 - 208,100,539 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 1 215,108,770 - 215,184,563 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 1 207,782,948 - 207,858,744 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 1 217,644,259 - 217,721,285 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 1 217,644,224 - 217,721,376 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 1 224,501,043 - 224,578,551 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 Rnor_5.0 1 222,200,653 - 222,216,178 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 1 204,907,328 - 204,984,408 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 1 205,061,640 - 205,139,124 (-) NCBI Celera 1 197,200,811 - 197,276,774 (-) NCBI Celera Cytogenetic Map 1 q42 NCBI
Ppfia1 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955422 15,892,566 - 15,998,786 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955422 15,892,945 - 15,998,786 (-) NCBI ChiLan1.0 ChiLan1.0
PPFIA1 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 9 71,237,861 - 71,355,690 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 11 72,282,135 - 72,399,879 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 11 65,368,262 - 65,486,023 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 11 68,656,692 - 68,770,842 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 11 68,657,638 - 68,769,464 (+) Ensembl panpan1.1 panPan2
PPFIA1 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 18 47,974,109 - 48,060,331 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 18 47,975,441 - 48,058,377 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 18 46,584,324 - 46,669,897 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 18 48,651,631 - 48,737,237 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 18 48,651,616 - 48,735,924 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 18 48,098,783 - 48,184,312 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 18 47,684,611 - 47,770,122 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 18 48,430,559 - 48,516,177 (-) NCBI UU_Cfam_GSD_1.0
Ppfia1
PPFIA1 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 2 3,073,241 - 3,164,235 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 2 3,073,236 - 3,165,476 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 2 1,493,699 - 1,537,667 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
PPFIA1 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 1 4,184,592 - 4,302,677 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 1 4,181,681 - 4,301,206 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666038 101,453,538 - 101,571,666 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Ppfia1
.
Predicted Target Of
Count of predictions: 2189 Count of miRNA genes: 707 Interacting mature miRNAs: 959 Transcripts: ENSMUST00000168134, ENSMUST00000182226, ENSMUST00000182731, ENSMUST00000182958, ENSMUST00000182982, ENSMUST00000183063, ENSMUST00000183106, ENSMUST00000183183, ENSMUST00000183197 Prediction methods: Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
11059562 Lmr21b_m leishmaniasis resistance 21b (mouse) 7 110967235 144967336 Mouse 1302032 Alcp12_m alcohol preference locus 12 (mouse) Not determined 7 111166122 144995196 Mouse 1301590 Pbwg3_m postnatal body weight growth 3 (mouse) Not determined 7 127311241 144995196 Mouse 1300566 Sluc8_m susceptibility to lung cancer 8 (mouse) Not determined 7 127398151 144995196 Mouse 1300670 Sluc19_m susceptibility to lung cancer 19 (mouse) Not determined 7 111166122 144995196 Mouse 14746988 Manh63_m mandible shape 63 (mouse) 7 127735437 144995196 Mouse 4142444 Femwf5_m femur work to failure 5 (mouse) Not determined 112552248 144995196 Mouse 1300677 Bmd9_m bone mineral density 9 (mouse) Not determined 7 116634089 144995196 Mouse 1300747 Skts2_m skin tumor susceptibility 2 (mouse) Not determined 7 112922733 144995196 Mouse 1301898 Alcp14_m alcohol preference locus 14 (mouse) Not determined 7 111166122 144995196 Mouse 1357711 Adbg1_m adult body growth 1 (mouse) Not determined 7 118693381 144398314 Mouse 10402499 Lmr21_m leishmaniasis resistance 21 (mouse) Not determined 7 110967235 144967336 Mouse 1301773 Stheal7_m soft tissue heal 7 (mouse) Not determined 7 119132573 144995196 Mouse
C87158
Mouse Assembly Chr Position (strand) Source JBrowse GRCm38 7 144,476,831 - 144,477,080 UniSTS GRCm38 MGSCv37 7 151,662,736 - 151,662,985 UniSTS GRCm37 Celera 7 144,239,507 - 144,239,756 UniSTS Cytogenetic Map 7 F5 UniSTS Whitehead/MRC_RH 7 1498.97 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSMUST00000168134 ⟹ ENSMUSP00000126233
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 7 144,030,495 - 144,107,466 (-) Ensembl GRCm38.p6 Ensembl 7 144,476,758 - 144,553,729 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000182226 ⟹ ENSMUSP00000138312
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 7 144,030,715 - 144,106,274 (-) Ensembl GRCm38.p6 Ensembl 7 144,476,978 - 144,552,537 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000182731 ⟹ ENSMUSP00000138238
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 7 144,072,995 - 144,106,099 (-) Ensembl GRCm38.p6 Ensembl 7 144,519,258 - 144,552,362 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000182958 ⟹ ENSMUSP00000138175
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 7 144,030,503 - 144,067,011 (-) Ensembl GRCm38.p6 Ensembl 7 144,476,766 - 144,513,274 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000182982
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 7 144,030,496 - 144,043,074 (-) Ensembl GRCm38.p6 Ensembl 7 144,476,759 - 144,489,337 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000183063
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 7 144,036,164 - 144,040,506 (-) Ensembl GRCm38.p6 Ensembl 7 144,482,427 - 144,486,769 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000183106
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 7 144,074,020 - 144,078,107 (-) Ensembl GRCm38.p6 Ensembl 7 144,520,283 - 144,524,370 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000183183
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 7 144,059,949 - 144,062,710 (-) Ensembl GRCm38.p6 Ensembl 7 144,506,212 - 144,508,973 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000183197
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 7 144,052,523 - 144,054,299 (-) Ensembl GRCm38.p6 Ensembl 7 144,498,786 - 144,500,562 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000207298
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 7 144,031,015 - 144,032,855 (-) Ensembl GRCm38.p6 Ensembl 7 144,477,278 - 144,479,118 (-) Ensembl
Ensembl Acc Id:
ENSMUST00000207471
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 7 144,037,970 - 144,040,751 (-) Ensembl GRCm38.p6 Ensembl 7 144,484,233 - 144,487,014 (-) Ensembl
RefSeq Acc Id:
NM_001033319 ⟹ NP_001028491
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,492 - 144,107,466 (-) NCBI GRCm38 7 144,476,755 - 144,553,729 (-) NCBI MGSCv37 7 151,662,883 - 151,739,591 (-) RGD Celera 7 144,239,431 - 144,317,453 (-) ENTREZGENE cM Map 7 ENTREZGENE
Sequence:
GGACGTCGGGCACGTTGACGCCGGCGACGCGCCGGGCCCGGTTCTCTGCGCTCGCTAGTGTCCCGCGGCGGCGGGCCGGCCTTCGTGACGAGCGGGGCGGCGGGCCCGGGGGCCGGGCGAGGACGCAG
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RefSeq Acc Id:
NM_001195086 ⟹ NP_001182015
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,492 - 144,107,466 (-) NCBI GRCm38 7 144,476,755 - 144,553,729 (-) NCBI Celera 7 144,239,431 - 144,317,453 (-) ENTREZGENE cM Map 7 ENTREZGENE
Sequence:
GGACGTCGGGCACGTTGACGCCGGCGACGCGCCGGGCCCGGTTCTCTGCGCTCGCTAGTGTCCC
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RefSeq Acc Id:
XM_006508598 ⟹ XP_006508661
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI GRCm38 7 144,476,758 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCCGGGCCCGGTTCTCTGCGCTCGCTAGTGTCCCGCGGCGGCGGGCCGGCCTTCGTGACGAGCGGGG
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RefSeq Acc Id:
XM_006508599 ⟹ XP_006508662
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI GRCm38 7 144,476,758 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCC
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RefSeq Acc Id:
XM_006508601 ⟹ XP_006508664
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI GRCm38 7 144,476,758 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCCGGGCCCGGTTCTCTGCGCTCGCTAGTGTCCCGCGGCGGCGGGCCGGCCTTCGTGACGAGCGGGG
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RefSeq Acc Id:
XM_006508603 ⟹ XP_006508666
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI GRCm38 7 144,476,758 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCC
hide sequence
RefSeq Acc Id:
XM_006508604 ⟹ XP_006508667
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI GRCm38 7 144,476,758 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCC
hide sequence
RefSeq Acc Id:
XM_006508605 ⟹ XP_006508668
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI GRCm38 7 144,476,758 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCC
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RefSeq Acc Id:
XM_006508607 ⟹ XP_006508670
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI GRCm38 7 144,476,758 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCC
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RefSeq Acc Id:
XM_006508608 ⟹ XP_006508671
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI GRCm38 7 144,476,758 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCC
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RefSeq Acc Id:
XM_006508609 ⟹ XP_006508672
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI GRCm38 7 144,476,758 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCC
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RefSeq Acc Id:
XM_006508610 ⟹ XP_006508673
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI GRCm38 7 144,476,758 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCCGGGCCCGGTTCTCTGCGCTCGCTAGTGTCCCGCGGCGGCGGGCCGGCCTTCGTGACGAGCGGGG
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RefSeq Acc Id:
XM_006508611 ⟹ XP_006508674
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,825 - 144,107,497 (-) NCBI GRCm38 7 144,477,483 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCCGGGCCCGGTTCTCTGCGCTCGCTAGTGTCCCGCGGCGGCGGGCCGGCCTTCGTGACGAGCGGGG
hide sequence
RefSeq Acc Id:
XM_006508612 ⟹ XP_006508675
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,492 (-) NCBI GRCm38 7 144,476,758 - 144,553,757 (-) NCBI
Sequence:
GGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCCGGGCCCGGTTCTCTGCGCTCGCTAGTGTCCCGCGGCGGCGGGCCGGCCTTCGTGACGAGCGGGGCGGCG
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RefSeq Acc Id:
XM_011241991 ⟹ XP_011240293
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI GRCm38 7 144,476,758 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCC
hide sequence
RefSeq Acc Id:
XM_011241992 ⟹ XP_011240294
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI GRCm38 7 144,476,758 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCC
hide sequence
RefSeq Acc Id:
XM_011241995 ⟹ XP_011240297
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI GRCm38 7 144,476,758 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCCGGGCCCGGTTCTCTGCGCTCGCTAGTGTCCCGCGGCGGCGGGCCGGCCTTCGTGACGAGCGGGG
hide sequence
RefSeq Acc Id:
XM_011241996 ⟹ XP_011240298
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,492 (-) NCBI GRCm38 7 144,476,758 - 144,553,757 (-) NCBI
Sequence:
GGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCCGGGCC
hide sequence
RefSeq Acc Id:
XM_011241997 ⟹ XP_011240299
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,068,683 (-) NCBI GRCm38 7 144,476,758 - 144,514,946 (-) NCBI
Sequence:
TCTGGTCCTTTGTCTTCTGGGAGTTCAGCTGCTAAGGAAGCAAAACTGTTGGAGCTTACTTCCA
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RefSeq Acc Id:
XM_017322220 ⟹ XP_017177709
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI GRCm38 7 144,476,758 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCCGGGCCCGGTTCTCTGCGCTCGCTAGTGTCCCGCGGCGGCGGGCCGGCCTTCGTGACGAGCGGGG
hide sequence
RefSeq Acc Id:
XM_017322221 ⟹ XP_017177710
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI GRCm38 7 144,476,758 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCC
hide sequence
RefSeq Acc Id:
XM_017322222 ⟹ XP_017177711
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI GRCm38 7 144,476,758 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCC
hide sequence
RefSeq Acc Id:
XM_017322223 ⟹ XP_017177712
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI GRCm38 7 144,476,758 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCCGGGCCCGGTTCTCTGCGCTCGCTAGTGTCCCGCGGCGGCGGGCCGGCCTTCGTGACGAGCGGGG
hide sequence
RefSeq Acc Id:
XM_017322224 ⟹ XP_017177713
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,825 - 144,107,497 (-) NCBI GRCm38 7 144,477,483 - 144,553,762 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCC
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RefSeq Acc Id:
XM_030242539 ⟹ XP_030098399
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,492 (-) NCBI GRCm38 7 144,476,758 - 144,553,762 (-) NCBI
Sequence:
GGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCCGGGCCCGGTTCTCTGCGCTCGCTAGTGTCCCGCGGCGGCGGGCCGGCCTTCGTGACGAGCGGGGCGGCG
hide sequence
RefSeq Acc Id:
XM_036153023 ⟹ XP_036008916
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCCGGGCCCGGTTCTCTGCGCTCGCTAGTGTCCCGCGGCGGCGGGCCGGCCTTCGTGACGAGCGGGG
hide sequence
RefSeq Acc Id:
XM_036153024 ⟹ XP_036008917
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,034,994 - 144,107,497 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCCGGGCCCGGTTCTCTGCGCTCGCTAGTGTCCCGCGGCGGCGGGCCGGCCTTCGTGACGAGCGGGG
hide sequence
RefSeq Acc Id:
XM_036153025 ⟹ XP_036008918
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 7 144,030,495 - 144,107,497 (-) NCBI
Sequence:
GGGGCGGTGCTGACGCTCGCGCCGACGCGCCGGACGTCGGGCACGTTGACGCCGGCGACGCGCCGGGCCCGGTTCTCTGCGCTCGCTAGTGTCCCGCGGCGGCGGGCCGGCCTTCGTGACGAGCGGGG
hide sequence
RefSeq Acc Id:
NP_001028491 ⟸ NM_001033319
- Peptide Label:
isoform B
- UniProtKB:
B2RXW8 (UniProtKB/TrEMBL), B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHL
hide sequence
RefSeq Acc Id:
NP_001182015 ⟸ NM_001195086
- Peptide Label:
isoform A
- UniProtKB:
B2RXQ2 (UniProtKB/TrEMBL), B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHL
hide sequence
RefSeq Acc Id:
XP_006508674 ⟸ XM_006508611
- Peptide Label:
isoform X24
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHL
hide sequence
RefSeq Acc Id:
XP_006508673 ⟸ XM_006508610
- Peptide Label:
isoform X22
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALT
hide sequence
RefSeq Acc Id:
XP_006508675 ⟸ XM_006508612
- Peptide Label:
isoform X26
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHL
hide sequence
RefSeq Acc Id:
XP_006508672 ⟸ XM_006508609
- Peptide Label:
isoform X19
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHL
hide sequence
RefSeq Acc Id:
XP_006508671 ⟸ XM_006508608
- Peptide Label:
isoform X15
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHL
hide sequence
RefSeq Acc Id:
XP_006508670 ⟸ XM_006508607
- Peptide Label:
isoform X14
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHL
hide sequence
RefSeq Acc Id:
XP_006508668 ⟸ XM_006508605
- Peptide Label:
isoform X13
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHL
hide sequence
RefSeq Acc Id:
XP_006508666 ⟸ XM_006508603
- Peptide Label:
isoform X11
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHL
hide sequence
RefSeq Acc Id:
XP_006508662 ⟸ XM_006508599
- Peptide Label:
isoform X5
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHL
hide sequence
RefSeq Acc Id:
XP_006508667 ⟸ XM_006508604
- Peptide Label:
isoform X12
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHL
hide sequence
RefSeq Acc Id:
XP_006508664 ⟸ XM_006508601
- Peptide Label:
isoform X7
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHL
hide sequence
RefSeq Acc Id:
XP_006508661 ⟸ XM_006508598
- Peptide Label:
isoform X4
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHL
hide sequence
RefSeq Acc Id:
XP_011240297 ⟸ XM_011241995
- Peptide Label:
isoform X6
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHL
hide sequence
RefSeq Acc Id:
XP_011240293 ⟸ XM_011241991
- Peptide Label:
isoform X2
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHL
hide sequence
RefSeq Acc Id:
XP_011240294 ⟸ XM_011241992
- Peptide Label:
isoform X3
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHL
hide sequence
RefSeq Acc Id:
XP_011240298 ⟸ XM_011241996
- Peptide Label:
isoform X1
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHL
hide sequence
RefSeq Acc Id:
XP_011240299 ⟸ XM_011241997
- Peptide Label:
isoform X25
- Sequence:
MMLQEQLDAINKEIRLIQEEKENTEQRAEEIESRVGSGSLDNLGRFRSMSSIPPYPASSLAGSS
hide sequence
RefSeq Acc Id:
XP_017177711 ⟸ XM_017322222
- Peptide Label:
isoform X16
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALT
hide sequence
RefSeq Acc Id:
XP_017177712 ⟸ XM_017322223
- Peptide Label:
isoform X18
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALT
hide sequence
RefSeq Acc Id:
XP_017177709 ⟸ XM_017322220
- Peptide Label:
isoform X8
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALT
hide sequence
RefSeq Acc Id:
XP_017177710 ⟸ XM_017322221
- Peptide Label:
isoform X9
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALT
hide sequence
RefSeq Acc Id:
XP_017177713 ⟸ XM_017322224
- Peptide Label:
isoform X21
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
- Sequence:
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALT
hide sequence
RefSeq Acc Id:
XP_030098399 ⟸ XM_030242539
- Peptide Label:
isoform X23
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSMUSP00000138238 ⟸ ENSMUST00000182731
Ensembl Acc Id:
ENSMUSP00000138175 ⟸ ENSMUST00000182958
Ensembl Acc Id:
ENSMUSP00000126233 ⟸ ENSMUST00000168134
Ensembl Acc Id:
ENSMUSP00000138312 ⟸ ENSMUST00000182226
RefSeq Acc Id:
XP_036008916 ⟸ XM_036153023
- Peptide Label:
isoform X10
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_036008918 ⟸ XM_036153025
- Peptide Label:
isoform X20
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_036008917 ⟸ XM_036153024
- Peptide Label:
isoform X17
- UniProtKB:
B8QI33 (UniProtKB/TrEMBL)
RGD ID: 8666285 Promoter ID: EPDNEW_M11174 Type: initiation region Name: Ppfia1_1 Description: Mus musculus protein tyrosine phosphatase, receptor type, f polypeptide, interacting protein , alpha 1 , transcript variant B, mRNA. SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Experiment Methods: Single-end sequencing. Position: Mouse Assembly Chr Position (strand) Source GRCm38 7 144,553,686 - 144,553,746 EPDNEW
RGD ID: 6841802 Promoter ID: MM_KWN:53431 Type: Non-CpG SO ACC ID: SO:0000170 Source: MPROMDB Tissues & Cell Lines: Brain, Lung Transcripts: UC009KQJ.1 Position: Mouse Assembly Chr Position (strand) Source MGSCv36 7 151,674,871 - 151,676,172 (-) MPROMDB
RGD ID: 6840699 Promoter ID: MM_KWN:53432 Type: Non-CpG SO ACC ID: SO:0000170 Source: MPROMDB Tissues & Cell Lines: Brain Transcripts: UC009KQK.1 Position: Mouse Assembly Chr Position (strand) Source MGSCv36 7 151,699,221 - 151,699,721 (-) MPROMDB
RGD ID: 6841797 Promoter ID: MM_KWN:53433 Type: CpG-Island SO ACC ID: SO:0000170 Source: MPROMDB Tissues & Cell Lines: 3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen Transcripts: NM_001033319 Position: Mouse Assembly Chr Position (strand) Source MGSCv36 7 151,739,556 - 151,740,056 (-) MPROMDB
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2024-08-26
Ppfia1
protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
C030014K08Rik
RIKEN cDNA C030014K08 gene
Symbol and/or name updated
27372883 PROVISIONAL
2024-08-21
C030014K08Rik
RIKEN cDNA C030014K08 gene
Ppfia1
protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
Symbol and/or name change
5135510 APPROVED
