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ONTOLOGY REPORT - ANNOTATIONS

Term:DNA damage response
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Accession:GO:0006974 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.
Synonyms:exact_synonym: cellular DNA damage response;   cellular response to DNA damage stimulus;   response to genotoxic stress
 broad_synonym: response to DNA damage stimulus
 alt_id: GO:0034984


show annotations for term's descendants           Sort by:
DNA damage response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07038657.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr  X:53,718,605...53,719,750 JBrowse link
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (PMID:15657060) RGD PMID:15657060 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065 		JBrowse link
G Acer2 alkaline ceramidase 2 involved_in ISO (PMID:26943039) RGD PMID:26943039 NCBI chr 5:101,391,830...101,442,615
Ensembl chr 5:101,391,885...101,442,614 		JBrowse link
G Aim2 absent in melanoma 2 involved_in ISO (PMID:27846608), (PMID:32350463) RGD PMID:27846608 PMID:32350463 NCBI chr13:85,865,206...85,906,996
Ensembl chr13:85,866,284...85,906,975 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in IDA PMID:20605787 UniProt PMID:20605787 RGD:10402036 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
G Alkbh7 alkB homolog 7 involved_in ISO (PMID:23666923) RGD PMID:23666923 NCBI chr 9:1,838,886...1,841,044
Ensembl chr 9:1,838,811...1,841,044 		JBrowse link
G Alkbh8 alkB homolog 8, tRNA methyltransferase involved_in ISO (PMID:20308323) RGD PMID:20308323 NCBI chr 6:378,779...449,382
Ensembl chr 6:378,100...452,165 		JBrowse link
G Ankle1 ankyrin repeat and LEM domain containing 1 involved_in
NOT|involved_in		 ISO (PMID:22399800)
(MGI:5800654|PMID:27010503)		 RGD PMID:22399800 PMID:27010503 MGI:5800654 NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729 		JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in ISO
IEA		 (PMID:18468999)
GO_REF:0000107
(MGI:3698695|PMID:17121854)		 RGD
Ensembl		 PMID:17121854 PMID:18468999 GO_REF:0000107 MGI:3698695 NCBI chr 1:159,896,889...159,920,505
Ensembl chr 1:159,896,880...159,920,627 		JBrowse link
G Apc APC regulator of WNT signaling pathway involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:14728717)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:14728717 GO_REF:0000024 GO_REF:0000107 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696 		JBrowse link
G Aplf aprataxin and PNKP like factor involved_in ISO (PMID:17396150) RGD PMID:17396150 NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633 		JBrowse link
G Armt1 acidic residue methyltransferase 1 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:25732820)		 UniProt
GO_Central
Ensembl
RGD		 PMID:25732820 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:40,894,558...40,918,302
Ensembl chr 1:40,894,550...40,918,302 		JBrowse link
G Ash2l ASH2 like histone lysine methyltransferase complex subunit acts_upstream_of_or_within ISO (PMID:17500065) RGD PMID:17500065 NCBI chr16:66,242,205...66,264,064
Ensembl chr16:66,242,212...66,264,061 		JBrowse link
G Atad3a ATPase family, AAA domain containing 3A involved_in ISO
ISS		 (PMID:37832546)
GO_REF:0000024		 RGD
UniProt		 PMID:37832546 GO_REF:0000024 NCBI chr 5:166,350,302...166,370,492
Ensembl chr 5:166,350,304...166,370,482 		JBrowse link
G Atad5 ATPase family, AAA domain containing 5 acts_upstream_of_or_within ISO (PMID:15983387) RGD PMID:15983387 NCBI chr10:65,070,682...65,118,489
Ensembl chr10:65,070,689...65,117,845 		JBrowse link
G Atf2 activating transcription factor 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5882896|PMID:15916964)
(PMID:15916964), (PMID:22304920)		 UniProt
RGD		 PMID:15916964 PMID:22304920 GO_REF:0000024 MGI:5882896 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236 		JBrowse link
G Atm ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 IDA
ISO
IMP		 (PMID:15790808), (PMID:16213212), (PMID:17875758), (PMID:24534091), (PMID:30952868), (PMID:38128537), (PMID:9733515)
MGI:3605986|MGI:894697 (PMID:19061978)
(PMID:24550317)		 RGD PMID:9733515 PMID:15790808 PMID:16213212 PMID:17875758 PMID:19061978 More... RGD:1599370, RGD:10053571, RGD:2316101 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Atr ATR serine/threonine kinase involved_in
acts_upstream_of_or_within		 ISO (PMID:11673449), (PMID:27723717), (PMID:27723720), (PMID:37788673), (PMID:37832547)
(PMID:15983387)		 RGD PMID:11673449 PMID:15983387 PMID:27723717 PMID:27723720 PMID:37788673 More... NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136 		JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:7826398)		 UniProt
RGD		 PMID:7826398 GO_REF:0000024 NCBI chr 6:24,369,021...24,788,416
Ensembl chr 6:24,369,022...24,833,951 		JBrowse link
G Batf basic leucine zipper ATF-like transcription factor involved_in ISS
ISO		 GO_REF:0000024
(MGI:5448499|PMID:22385964)		 UniProt
RGD		 PMID:22385964 GO_REF:0000024 MGI:5448499 NCBI chr 6:105,353,715...105,376,051
Ensembl chr 6:105,353,715...105,376,051 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:1857429 (PMID:12952892), (PMID:9454845) RGD PMID:9454845 PMID:12952892 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Baz1b bromodomain adjacent to zinc finger domain, 1B involved_in ISO
IBA		 (PMID:19092802)
GO_REF:0000033		 RGD
GO_Central		 PMID:19092802 GO_REF:0000033 NCBI chr12:21,431,985...21,489,956
Ensembl chr12:21,431,985...21,490,426 		JBrowse link
G Bbc3 Bcl-2 binding component 3 involved_in ISO UniProtKB:P02340 (MGI:4944151|PMID:20818388) RGD PMID:20818388 MGI:4944151 NCBI chr 1:77,013,281...77,022,509
Ensembl chr 1:77,014,543...77,022,509 		JBrowse link
G Bccip BRCA2 and CDKN1A interacting protein involved_in ISO (MGI:5288472|PMID:21966279) RGD PMID:21966279 MGI:5288472 NCBI chr 1:188,512,544...188,524,957
Ensembl chr 1:188,512,367...188,524,958 		JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in ISO (PMID:17875758) RGD PMID:17875758 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Bcl3 BCL3, transcription coactivator involved_in ISO (PMID:16384933) RGD PMID:16384933 NCBI chr 1:79,471,368...79,485,908
Ensembl chr 1:79,471,369...79,485,607 		JBrowse link
G Bcl6 BCL6, transcription repressor involved_in ISO (PMID:15577913) RGD PMID:15577913 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389 		JBrowse link
G Bclaf1 BCL2-associated transcription factor 1 involved_in ISO (PMID:17938203) RGD PMID:17938203 NCBI chr 1:15,088,436...15,117,666
Ensembl chr 1:15,070,894...15,148,832 		JBrowse link
G Blm BLM RecQ like helicase involved_in ISO (PMID:12818200), (PMID:23509288) RGD PMID:12818200 PMID:23509288 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Bod1l1 biorientation of chromosomes in cell division 1-like 1 involved_in ISO (PMID:26166705) RGD PMID:26166705 NCBI chr14:69,108,483...69,163,255
Ensembl chr14:69,108,491...69,162,490 		JBrowse link
G Brat1 BRCA1-associated ATM activator 1 involved_in ISO
IBA		 (PMID:25631046)
GO_REF:0000033		 RGD
GO_Central		 PMID:25631046 GO_REF:0000033 NCBI chr12:13,928,889...13,951,760
Ensembl chr12:13,928,898...13,941,248 		JBrowse link
G Brca1 BRCA1, DNA repair associated acts_upstream_of_or_within ISO MGI:3696057 (PMID:23271346) RGD PMID:23271346 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in ISO (MGI:3818835|PMID:12410562) RGD PMID:12410562 MGI:3818835 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567 		JBrowse link
G Brd4 bromodomain containing 4 involved_in ISO (PMID:23728299) RGD PMID:23728299 NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539 		JBrowse link
G Brsk1 BR serine/threonine kinase 1 involved_in ISO (PMID:15150265) RGD PMID:15150265 NCBI chr 1:69,134,166...69,159,947
Ensembl chr 1:69,134,565...69,160,365 		JBrowse link
G Brsk2 BR serine/threonine kinase 2 involved_in ISS PMID:15150265 UniProt PMID:15150265 RGD:8554801 NCBI chr 1:197,035,505...197,088,624
Ensembl chr 1:197,035,633...197,088,092 		JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (PMID:8944033) RGD PMID:8944033 NCBI chr13:45,531,881...45,535,642
Ensembl chr13:45,531,925...45,535,628 		JBrowse link
G C1h10orf90 similar to human chromosome 10 open reading frame 90 involved_in ISO (MGI:4455105|PMID:20154723) RGD PMID:20154723 MGI:4455105 NCBI chr 1:189,059,744...189,293,353
Ensembl chr 1:189,059,746...189,293,435 		JBrowse link
G C1qbp complement C1q binding protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:55,699,954...55,704,605
Ensembl chr10:55,699,954...55,704,649 		JBrowse link
G Casp3 caspase 3 acts_upstream_of_or_within ISO (PMID:11092819) RGD PMID:11092819 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648 		JBrowse link
G Casp9 caspase 9 involved_in
acts_upstream_of_or_within		 ISO (PMID:15657060)
MGI:2158755 (PMID:11092819)		 RGD PMID:11092819 PMID:15657060 NCBI chr 5:154,108,872...154,126,628
Ensembl chr 5:154,109,046...154,126,626 		JBrowse link
G Cbl Cbl proto-oncogene IEP RGD PMID:19546888 RGD:11038823 NCBI chr 8:44,487,824...44,571,620
Ensembl chr 8:44,489,410...44,571,176 		JBrowse link
G Cbx1 chromobox 1 involved_in ISO (PMID:27248496) RGD PMID:27248496 NCBI chr10:81,770,307...81,789,981
Ensembl chr10:81,770,342...81,791,096 		JBrowse link
G Cbx3 chromobox 3 involved_in ISO (PMID:27248496) RGD PMID:27248496 NCBI chr 4:80,545,450...80,559,284
Ensembl chr 4:80,546,010...80,559,283 		JBrowse link
G Cbx5 chromobox 5 involved_in ISO (PMID:27248496) RGD PMID:27248496 NCBI chr 7:134,333,165...134,376,102
Ensembl chr 7:134,331,335...134,375,022 		JBrowse link
G Ccdc13 coiled-coil domain containing 13 acts_upstream_of_or_within ISO (PMID:24816561) RGD PMID:24816561 NCBI chr 8:121,455,202...121,507,487
Ensembl chr 8:121,457,697...121,502,337 		JBrowse link
G Ccnd1 cyclin D1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19412162)		 UniProt
RGD		 PMID:19412162 GO_REF:0000024 NCBI chr 1:200,089,002...200,098,524
Ensembl chr 1:200,089,002...200,098,602 		JBrowse link
G Ccnk cyclin K acts_upstream_of_or_within ISO (PMID:22012619) RGD PMID:22012619 NCBI chr 6:127,090,115...127,113,195
Ensembl chr 6:127,090,569...127,113,191 		JBrowse link
G Cdk1 cyclin-dependent kinase 1 involved_in ISO (PMID:19202191) RGD PMID:19202191 NCBI chr20:19,266,226...19,281,417
Ensembl chr20:19,266,248...19,281,408 		JBrowse link
G Cdk2 cyclin dependent kinase 2 IMP RGD PMID:19151707 RGD:10053571 NCBI chr 7:1,129,878...1,137,431
Ensembl chr 7:1,129,811...1,137,403 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 IMP RGD PMID:19151707 RGD:10053571 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Cdk6 cyclin-dependent kinase 6 IMP RGD PMID:19151707 RGD:10053571 NCBI chr 4:30,637,650...30,829,688
Ensembl chr 4:30,646,460...30,829,634 		JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:20160708)
MGI:1933751 (PMID:12952892)
GO_REF:0000033		 RGD
GO_Central		 PMID:12952892 PMID:20160708 GO_REF:0000033 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585 		JBrowse link
G Cdkn2aip CDKN2A interacting protein involved_in ISO
ISS		 (PMID:24825908)
GO_REF:0000024		 RGD
UniProt		 PMID:24825908 GO_REF:0000024 NCBI chr16:44,536,147...44,546,216
Ensembl chr16:44,536,234...44,540,033 		JBrowse link
G Cenps centromere protein S involved_in ISO (PMID:20347428), (PMID:20347429) RGD PMID:20347428 PMID:20347429 NCBI chr 5:159,563,917...159,573,534 JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO
IBA		 (PMID:28738408)
GO_REF:0000033		 RGD
GO_Central		 PMID:28738408 GO_REF:0000033 NCBI chr 8:79,292,282...79,306,998
Ensembl chr 8:79,294,511...79,305,496 		JBrowse link
G Chchd6 coiled-coil-helix-coiled-coil-helix domain containing 6 involved_in ISO
IBA
IEA
ISS		 (PMID:22228767)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
UniProt		 PMID:22228767 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:121,803,501...122,024,209
Ensembl chr 4:121,792,717...122,024,216 		JBrowse link
G Chd1l chromodomain helicase DNA binding protein 1-like involved_in ISO
IBA		 (PMID:19661379), (PMID:29220652), (PMID:29220653)
GO_REF:0000033		 RGD
GO_Central		 PMID:19661379 PMID:29220652 PMID:29220653 GO_REF:0000033 NCBI chr 2:185,138,526...185,217,498
Ensembl chr 2:185,139,308...185,217,595 		JBrowse link
G Chd2 chromodomain helicase DNA binding protein 2 acts_upstream_of_or_within ISO MGI:3800602 (PMID:19137022) RGD PMID:19137022 NCBI chr 1:127,188,146...127,317,041
Ensembl chr 1:127,190,059...127,300,502 		JBrowse link
G Chek1 checkpoint kinase 1 involved_in
acts_upstream_of_or_within		 ISO
ISS		 (PMID:20932473)
(PMID:11790307), (PMID:12529385)
(MGI:5294291|PMID:18243098)
GO_REF:0000024		 RGD
UniProt		 PMID:11790307 PMID:12529385 PMID:18243098 PMID:20932473 GO_REF:0000024 MGI:5294291 NCBI chr 8:36,420,565...36,443,477
Ensembl chr 8:36,420,569...36,441,009 		JBrowse link
G Chek2 checkpoint kinase 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:16481012)
(PMID:24550317)		 RGD PMID:16481012 PMID:24550317 NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286 		JBrowse link
G Cib1 calcium and integrin binding 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:12011095)		 HGNC-UCL
Ensembl
RGD		 PMID:12011095 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:134,178,331...134,183,895
Ensembl chr 1:134,178,331...134,213,423 		JBrowse link
G Cip2a cellular inhibitor of PP2A involved_in ISO (PMID:35842428), (PMID:37165191), (PMID:37316668) RGD PMID:35842428 PMID:37165191 PMID:37316668 NCBI chr11:51,792,143...51,823,016
Ensembl chr11:51,795,024...51,822,938 		JBrowse link
G Clock clock circadian regulator involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISO (PMID:18411307), (PMID:18583988), (PMID:20545769), (PMID:30898438), (PMID:35597237) RGD PMID:18411307 PMID:18583988 PMID:20545769 PMID:30898438 PMID:35597237 NCBI chr 3:140,709,984...140,756,757
Ensembl chr 3:140,709,991...140,756,696 		JBrowse link
G Ctc1 CST telomere replication complex component 1 acts_upstream_of_or_within ISO MGI:5427642 (PMID:22531781) RGD PMID:22531781 NCBI chr10:53,714,614...53,735,298
Ensembl chr10:53,714,644...53,735,298 		JBrowse link
G Ctla4 cytotoxic T-lymphocyte-associated protein 4 involved_in ISO (PMID:17875758) RGD PMID:17875758 NCBI chr 9:62,318,874...62,325,978
Ensembl chr 9:62,319,312...62,324,963 		JBrowse link
G Cul4a cullin 4A involved_in ISO
IBA		 (PMID:22118460)
GO_REF:0000033
(MGI:6867266|PMID:22118460)		 RGD
GO_Central		 PMID:22118460 GO_REF:0000033 MGI:6867266 NCBI chr16:76,385,298...76,422,316
Ensembl chr16:76,384,546...76,422,330 		JBrowse link
G Cul4b cullin 4B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:117,287,481...117,326,688
Ensembl chr  X:117,287,484...117,326,688 		JBrowse link
G Dcun1d5 defective in cullin neddylation 1 domain containing 5 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:23098533), (PMID:26906416)		 UniProt
Ensembl
RGD		 PMID:23098533 PMID:26906416 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:4,412,266...4,433,380
Ensembl chr 8:4,412,221...4,433,367 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO (PMID:16949367), (PMID:22118460)
(MGI:6867266|PMID:22118460)		 RGD PMID:16949367 PMID:22118460 MGI:6867266 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676 		JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in ISO (PMID:22118460)
(MGI:6867266|PMID:22118460)		 RGD PMID:22118460 MGI:6867266 NCBI chr 3:77,185,114...77,207,650
Ensembl chr 3:77,185,109...77,207,631 		JBrowse link
G Ddias DNA damage-induced apoptosis suppressor acts_upstream_of_or_within ISO (PMID:17515607) RGD PMID:17515607 NCBI chr 1:146,906,150...146,930,462
Ensembl chr 1:146,906,154...146,930,462 		JBrowse link
G Ddx11 DEAD/H-box helicase 11 involved_in ISO (PMID:23797032) RGD PMID:23797032 NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550 		JBrowse link
G Dele1 DAP3 binding cell death enhancer 1 involved_in ISO
ISS		 (PMID:37832546)
GO_REF:0000024		 RGD
UniProt		 PMID:37832546 GO_REF:0000024 NCBI chr18:30,085,093...30,098,105
Ensembl chr18:30,085,126...30,098,756 		JBrowse link
G Dgcr8 DGCR8 microprocessor complex subunit involved_in ISO (PMID:34188037) RGD PMID:34188037 NCBI chr11:82,704,673...82,737,251
Ensembl chr11:82,704,729...82,737,242 		JBrowse link
G Dtl denticleless E3 ubiquitin protein ligase homolog involved_in ISO (PMID:16949367), (PMID:20129063) RGD PMID:16949367 PMID:20129063 NCBI chr13:103,115,810...103,155,029
Ensembl chr13:103,117,186...103,154,890 		JBrowse link
G Dynll1 dynein light chain LC8-type 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:41,312,365...41,316,157
Ensembl chr12:41,312,367...41,314,741 		JBrowse link
G Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 involved_in ISO (PMID:19965871) RGD PMID:19965871 NCBI chr 7:54,348,724...54,381,363
Ensembl chr 7:54,349,610...54,380,106 		JBrowse link
G Egln3 egl-9 family hypoxia-inducible factor 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:71,650,297...71,675,766
Ensembl chr 6:71,650,297...71,675,766 		JBrowse link
G Endog endonuclease G involved_in ISO (PMID:33473107) RGD PMID:33473107 NCBI chr 3:13,449,113...13,451,715
Ensembl chr 3:13,449,086...13,451,932 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO MGI:2183944|MGI:2183945 (PMID:11707424), (PMID:15692571), (PMID:15979950), (PMID:9197240) RGD PMID:9197240 PMID:11707424 PMID:15692571 PMID:15979950 NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO MGI:1932102 (PMID:11408355), (PMID:15979950) RGD PMID:11408355 PMID:15979950 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO (PMID:11782547) RGD PMID:11782547 NCBI chr 2:39,647,393...39,686,229
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
G Etaa1 ETAA1 activator of ATR kinase involved_in ISO
IBA		 (PMID:27723717), (PMID:27723720)
GO_REF:0000033		 RGD
GO_Central		 PMID:27723717 PMID:27723720 GO_REF:0000033 NCBI chr14:92,298,461...92,314,044
Ensembl chr14:92,299,553...92,314,104 		JBrowse link
G Faap20 FA core complex associated protein 20 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
(PMID:22266823), (PMID:22343915), (PMID:22396592), (PMID:22705371)		 UniProt
GO_Central
TreeGrafter
RGD		 PMID:22266823 PMID:22343915 PMID:22396592 PMID:22705371 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:165,808,370...165,815,291
Ensembl chr 5:165,808,657...165,815,333 		JBrowse link
G Fam111a FAM111 trypsin like peptidase A involved_in ISO (PMID:32165630) RGD PMID:32165630 NCBI chr 1:209,640,865...209,656,551
Ensembl chr 1:209,640,953...209,656,547 		JBrowse link
G Fam178b family with sequence similarity 178, member B involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 9:38,805,864...38,913,681
Ensembl chr 9:38,805,864...38,913,672 		JBrowse link
G Fancd2 FA complementation group D2 acts_upstream_of_or_within ISO MGI:2673422 (PMID:12893777) RGD PMID:12893777 NCBI chr 4:146,679,014...146,743,422
Ensembl chr 4:146,679,179...146,743,412 		JBrowse link
G Fancf FA complementation group F involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:21915857)		 GO_Central
RGD		 PMID:21915857 GO_REF:0000033 NCBI chr 1:101,449,120...101,451,936
Ensembl chr 1:101,450,389...101,451,923 		JBrowse link
G Fancg FA complementation group G involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2183264|MGI:2183473 (PMID:11719385), (PMID:11823446)		 GO_Central
RGD		 PMID:11719385 PMID:11823446 GO_REF:0000033 NCBI chr 5:57,230,287...57,240,067
Ensembl chr 5:57,231,685...57,240,029 		JBrowse link
G Fancl FA complementation group L involved_in ISO (PMID:16916645) RGD PMID:16916645 NCBI chr14:100,249,733...100,317,958
Ensembl chr14:100,248,875...100,314,255 		JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in ISO (PMID:19736316), (PMID:23361013), (PMID:25585578) RGD PMID:19736316 PMID:23361013 PMID:25585578 NCBI chr17:66,749,506...66,787,590
Ensembl chr17:66,749,534...66,787,590 		JBrowse link
G Fbxo31 F-box protein 31 involved_in ISO
ISS		 (PMID:19412162)
GO_REF:0000024		 RGD
UniProt		 PMID:19412162 GO_REF:0000024 NCBI chr19:49,624,813...49,656,052
Ensembl chr19:49,627,686...49,656,010 		JBrowse link
G Fbxo45 F-box protein 45 involved_in ISO
IEA		 (PMID:19581926)
GO_REF:0000107		 RGD
Ensembl		 PMID:19581926 GO_REF:0000107 NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800 		JBrowse link
G Fbxo5 F-box protein 5 involved_in ISO (PMID:17875940) RGD PMID:17875940 NCBI chr 1:42,196,068...42,202,437
Ensembl chr 1:42,196,068...42,202,437 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO
ISS		 (PMID:17873522)
GO_REF:0000024		 RGD
UniProt		 PMID:17873522 GO_REF:0000024 NCBI chr 2:170,149,706...170,311,536
Ensembl chr 2:170,149,694...170,309,941 		JBrowse link
G Fh fumarate hydratase involved_in ISO
ISS		 (PMID:20231875), (PMID:26237645)
GO_REF:0000024		 RGD
UniProt		 PMID:20231875 PMID:26237645 GO_REF:0000024 NCBI chr13:87,524,331...87,550,215
Ensembl chr13:87,524,337...87,550,266 		JBrowse link
G Flywch1 FLYWCH-type zinc finger 1 involved_in ISO (PMID:33924684) RGD PMID:33924684 NCBI chr10:12,774,644...12,794,373
Ensembl chr10:12,774,653...12,794,267 		JBrowse link
G Fmn2 formin 2 involved_in ISO (PMID:23375502), (PMID:26287480) RGD PMID:23375502 PMID:26287480 NCBI chr13:86,454,256...86,771,437
Ensembl chr13:86,453,926...86,771,411 		JBrowse link
G Foxo1 forkhead box O1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5437421|PMID:21196578)		 UniProt
RGD		 PMID:21196578 GO_REF:0000024 MGI:5437421 NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790 		JBrowse link
G Foxp1 forkhead box P1 involved_in ISO (PMID:30111844) RGD PMID:30111844 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258 		JBrowse link
G Gadd45a growth arrest and DNA-damage-inducible, alpha involved_in TAS
IEA		 GO_REF:0000043 UniProt
RGD		 PMID:11964479 GO_REF:0000043, RGD:728684 NCBI chr 4:96,154,789...96,157,091
Ensembl chr 4:96,154,789...96,157,115 		JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:29651020)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:29651020 GO_REF:0000024 GO_REF:0000107 NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814 		JBrowse link
G Gnb1l G protein subunit beta 1 like involved_in ISO (PMID:37541219) RGD PMID:37541219 NCBI chr11:82,425,301...82,507,836
Ensembl chr11:82,432,627...82,507,466 		JBrowse link
G Gnl1 G protein nucleolar 1 involved_in ISO
IEA		 (PMID:17525332)
GO_REF:0000107		 RGD
Ensembl		 PMID:17525332 GO_REF:0000107 NCBI chr20:2,783,130...2,792,115
Ensembl chr20:2,778,985...2,792,115 		JBrowse link
G H2ac20 H2A clustered histone 20 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:183,779,879...183,780,357 JBrowse link
G H2aj H2A.J histone involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:169,675,718...169,676,202
Ensembl chr 4:169,675,752...169,677,006 		JBrowse link
G H2ax H2A.X variant histone involved_in ISO
IBA		 (PMID:15149599), (PMID:27248496)
GO_REF:0000033		 RGD
GO_Central		 PMID:15149599 PMID:27248496 GO_REF:0000033 NCBI chr 8:44,671,907...44,673,262
Ensembl chr 8:44,671,786...44,673,239 		JBrowse link
G Helb DNA helicase B involved_in ISO (PMID:26774285)
(MGI:5766842|PMID:26774285)		 RGD PMID:26774285 MGI:5766842 NCBI chr 7:55,588,510...55,615,979
Ensembl chr 7:55,588,798...55,615,585 		JBrowse link
G Herc2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 involved_in ISO (PMID:22508508) RGD PMID:22508508 NCBI chr 1:106,904,789...107,110,997
Ensembl chr 1:106,880,084...107,108,134 		JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in ISS
ISO		 GO_REF:0000024
(PMID:30554877), (PMID:31235913), (PMID:32492421), (PMID:36608669), (PMID:37519246), (PMID:37950866)		 UniProt
RGD		 PMID:30554877 PMID:31235913 PMID:32492421 PMID:36608669 PMID:37519246 More... GO_REF:0000024 NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Hpf1 histone PARylation factor 1 involved_in ISO
IBA		 (PMID:27067600), (PMID:29480802)
GO_REF:0000033		 RGD
GO_Central		 PMID:27067600 PMID:29480802 GO_REF:0000033 NCBI chr16:29,203,749...29,219,651
Ensembl chr16:29,183,256...29,219,716 		JBrowse link
G Hrob homologous recombination factor with OB-fold involved_in ISO
ISS		 (PMID:31467087)
GO_REF:0000024		 RGD
UniProt		 PMID:31467087 GO_REF:0000024 NCBI chr10:87,206,017...87,222,483
Ensembl chr10:87,206,049...87,222,483 		JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 7:21,110,431...21,124,762
Ensembl chr 7:21,110,457...21,124,788 		JBrowse link
G Hus1 HUS1 checkpoint clamp component acts_upstream_of_or_within ISO (PMID:11790307) RGD PMID:11790307 NCBI chr14:83,688,702...83,703,466
Ensembl chr14:83,688,708...83,703,442 		JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:20467439)
GO_REF:0000033
MGI:3773690 (PMID:20467439)		 RGD
GO_Central		 PMID:20467439 GO_REF:0000033 NCBI chr20:2,928,378...2,929,582
Ensembl chr20:2,928,378...2,929,583 		JBrowse link
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in ISO
IEA
ISS		 (PMID:14651848), (PMID:25861989)
GO_REF:0000043
GO_REF:0000024		 RGD
UniProt		 PMID:14651848 PMID:25861989 GO_REF:0000024 GO_REF:0000043 NCBI chr  X:152,216,485...152,241,476
Ensembl chr  X:152,216,596...152,239,499 		JBrowse link
G Immp2l inner mitochondrial membrane peptidase subunit 2 acts_upstream_of_or_within ISO MGI:3765965 (PMID:21824519) RGD PMID:21824519 NCBI chr 6:58,070,035...58,970,165
Ensembl chr 6:58,070,283...58,969,840 		JBrowse link
G Inip INTS3 and NABP interacting protein involved_in ISO (PMID:19683501) RGD PMID:19683501 NCBI chr 5:74,648,392...74,662,628
Ensembl chr 5:74,648,392...74,662,628 		JBrowse link
G Ints3 integrator complex subunit 3 involved_in ISO (PMID:19683501) RGD PMID:19683501 NCBI chr 2:175,859,421...175,911,683
Ensembl chr 2:175,859,440...175,911,709 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6446379|PMID:30297459)
(PMID:33076429)		 UniProt
RGD		 PMID:30297459 PMID:33076429 GO_REF:0000024 MGI:6446379 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Kdm4d lysine demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) RGD PMID:24550317 NCBI chr 8:11,279,756...11,304,920
Ensembl chr 8:11,268,859...11,305,290 		JBrowse link
G Kin Kin17 DNA and RNA binding protein involved_in ISO
IBA		 (PMID:12853634)
GO_REF:0000033
(MGI:84658|PMID:8954809)		 RGD
GO_Central		 PMID:8954809 PMID:12853634 GO_REF:0000033 MGI:84658 NCBI chr17:68,413,483...68,431,392
Ensembl chr17:68,413,486...68,423,845 		JBrowse link
G LOC120094818 TIMELESS-interacting protein-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:113,693,252...113,694,434
Ensembl chr 8:64,780,828...64,801,352 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in IBA
ISO		 GO_REF:0000033
(PMID:11517336)		 GO_Central
RGD		 PMID:11517336 GO_REF:0000033 NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868 		JBrowse link
G Macrod1 mono-ADP ribosylhydrolase 1 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
(PMID:23474712)		 UniProt
TreeGrafter
GO_Central
Ensembl
RGD		 PMID:23474712 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:204,246,238...204,387,027
Ensembl chr 1:204,246,166...204,389,716 		JBrowse link
G Macrod2 mono-ADP ribosylhydrolase 2 involved_in ISO (PMID:23474712) RGD PMID:23474712 NCBI chr 3:127,720,066...129,737,511
Ensembl chr 3:127,720,181...129,734,492 		JBrowse link
G Mael maelstrom spermatogenic transposon silencer acts_upstream_of_or_within ISO MGI:3795667 (PMID:18694567) RGD PMID:18694567 NCBI chr13:78,457,073...78,496,657
Ensembl chr13:78,457,073...78,496,657 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15383658)		 Ensembl
RGD		 PMID:15383658 GO_REF:0000107 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616 		JBrowse link
G Mapk14 mitogen activated protein kinase 14 acts_upstream_of_or_within ISO (PMID:20212154) RGD PMID:20212154 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589 		JBrowse link
G Mapk15 mitogen-activated protein kinase 15 involved_in ISO
IEA		 (PMID:19166846)
GO_REF:0000107		 RGD
Ensembl		 PMID:19166846 GO_REF:0000107 NCBI chr 7:107,694,907...107,714,640
Ensembl chr 7:107,694,964...107,714,645 		JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:15383658) RGD PMID:15383658 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in ISO (PMID:20932473) RGD PMID:20932473 NCBI chr13:42,513,762...42,560,061
Ensembl chr13:42,513,762...42,560,457 		JBrowse link
G Mapt microtubule-associated protein tau involved_in ISO (PMID:21131359)
(MGI:5816445|PMID:21131359)		 RGD PMID:21131359 MGI:5816445 NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129 		JBrowse link
G Mbd4 methyl-CpG binding domain 4 DNA glycosylase acts_upstream_of_or_within ISO MGI:2183491 (PMID:14562041) RGD PMID:14562041 NCBI chr 4:148,893,049...148,904,833
Ensembl chr 4:148,894,280...148,904,982 		JBrowse link
G Mcl1 MCL1 apoptosis regulator, BCL2 family member acts_upstream_of_or_within ISO (PMID:20467439) RGD PMID:20467439 NCBI chr 2:183,219,137...183,235,676
Ensembl chr 2:183,219,220...183,222,303 		JBrowse link
G Mcm10 minichromosome maintenance 10 replication initiation factor involved_in ISO (PMID:24726359) RGD PMID:24726359 NCBI chr17:73,263,788...73,288,346
Ensembl chr17:73,266,095...73,287,364 		JBrowse link
G Mcm7 minichromosome maintenance complex component 7 involved_in ISO (PMID:15538388) RGD PMID:15538388 NCBI chr12:17,042,207...17,049,470
Ensembl chr12:17,042,212...17,050,063 		JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor involved_in ISO
ISS		 (PMID:22771115)
(MGI:5437561|PMID:22771120)
GO_REF:0000024		 RGD
UniProt		 PMID:22771115 PMID:22771120 GO_REF:0000024 MGI:5437561 NCBI chr 3:120,086,741...120,117,008
Ensembl chr 3:120,086,763...120,117,008 		JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in ISO
ISS		 (PMID:22771115)
GO_REF:0000024
(MGI:5437561|PMID:22771120)		 RGD
UniProt		 PMID:22771115 PMID:22771120 GO_REF:0000024 MGI:5437561 NCBI chr20:32,818,219...32,929,577
Ensembl chr20:32,844,951...32,929,600 		JBrowse link
G Mcts1 MCTS1, re-initiation and release factor involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:117,350,723...117,362,504
Ensembl chr  X:117,350,889...117,362,504 		JBrowse link
G Mdc1 mediator of DNA damage checkpoint 1 involved_in ISO (PMID:30898438) RGD PMID:30898438 NCBI chr20:2,893,693...2,912,394
Ensembl chr20:2,895,505...2,910,240 		JBrowse link
G Men1 menin 1 involved_in ISO
IEA		 (PMID:16690369)
GO_REF:0000107		 RGD
Ensembl		 PMID:16690369 GO_REF:0000107 NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:28297716) RGD PMID:28297716 NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase acts_upstream_of_or_within IEP
ISO		 MGI:1857949 (PMID:10657972), (PMID:9560238) RGD PMID:9560238 PMID:10657972 PMID:12815001 RGD:2316926 NCBI chr 1:191,710,980...191,937,760
Ensembl chr 1:191,710,930...191,937,756 		JBrowse link
G Mill1 MHC I like leukocyte 1 involved_in ISO (PMID:15995699) RGD PMID:15995699 NCBI chr 1:78,372,798...78,398,932
Ensembl chr 1:78,372,802...78,398,930 		JBrowse link
G Mir193a microRNA 193a involved_in ISO (PMID:25542424) RGD PMID:25542424 NCBI chr10:64,672,343...64,672,454
Ensembl chr10:64,672,343...64,672,454 		JBrowse link
G Mir34a microRNA 34a involved_in ISO (PMID:30111844) RGD PMID:30111844 NCBI chr 5:160,533,002...160,533,103
Ensembl chr 5:160,533,002...160,533,103 		JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO MGI:1857946|MGI:96977 (PMID:10657972), (PMID:14562041), (PMID:16204034), (PMID:9560238) RGD PMID:9560238 PMID:10657972 PMID:14562041 PMID:16204034 NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Mlh3 mutL homolog 3 acts_upstream_of_or_within ISO MGI:104288|MGI:2384218 (PMID:16204034) RGD PMID:16204034 NCBI chr 6:104,881,483...104,917,686
Ensembl chr 6:104,881,483...104,917,728 		JBrowse link
G Mnda myeloid cell nuclear differentiation antigen involved_in ISO (PMID:17875758) RGD PMID:17875758 NCBI chr13:86,017,888...86,035,556
Ensembl chr13:86,017,892...86,034,201 		JBrowse link
G Morc2 MORC family CW-type zinc finger 2 involved_in ISO (PMID:23260667) RGD PMID:23260667 NCBI chr14:78,529,603...78,571,375
Ensembl chr14:78,527,009...78,571,343 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:17500065)
(PMID:29670289)		 UniProt
RGD		 PMID:17500065 PMID:29670289 GO_REF:0000024 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO (PMID:27568553) RGD PMID:27568553 NCBI chr10:34,501,359...34,525,474
Ensembl chr10:34,501,384...34,525,469 		JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within ISO MGI:1858055|MGI:2680817 (PMID:10097137), (PMID:10720738), (PMID:11429706), (PMID:14744764) RGD PMID:10097137 PMID:10720738 PMID:11429706 PMID:14744764 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msl2 MSL complex subunit 2 involved_in ISO (PMID:19033443), (PMID:23874665) RGD PMID:19033443 PMID:23874665 NCBI chr 8:101,676,605...101,702,818
Ensembl chr 8:101,676,765...101,763,833 		JBrowse link
G Mtrex Mtr4 exosome RNA helicase involved_in ISO (PMID:29902117) RGD PMID:29902117 NCBI chr 2:44,500,326...44,560,624
Ensembl chr 2:44,461,444...44,560,627 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:20212154)
(PMID:17873522)		 UniProt
RGD		 PMID:17873522 PMID:20212154 GO_REF:0000024 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Nabp1 nucleic acid binding protein 1 involved_in ISO
ISS		 (PMID:19683501)
GO_REF:0000024		 RGD
UniProt		 PMID:19683501 GO_REF:0000024 NCBI chr 9:50,098,552...50,133,982
Ensembl chr 9:50,126,726...50,134,107 		JBrowse link
G Nabp2 nucleic acid binding protein 2 involved_in ISO
ISS		 (PMID:18449195), (PMID:19683501)
GO_REF:0000024		 RGD
UniProt		 PMID:18449195 PMID:19683501 GO_REF:0000024 NCBI chr 7:830,949...836,551
Ensembl chr 7:830,949...838,027 		JBrowse link
G Nae1 NEDD8 activating enzyme E1 subunit 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:446,015...472,145
Ensembl chr19:446,000...472,371 		JBrowse link
G Ncoa6 nuclear receptor coactivator 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17500065)
GO_REF:0000107		 RGD
Ensembl		 PMID:17500065 GO_REF:0000107 NCBI chr 3:143,890,896...143,961,916
Ensembl chr 3:143,890,896...143,952,268 		JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in IEA
ISO		 GO_REF:0000107
(PMID:17996703)		 Ensembl
RGD		 PMID:17996703 GO_REF:0000107 NCBI chr 8:73,384,095...73,468,951
Ensembl chr 8:73,383,695...73,468,951 		JBrowse link
G Nek1 NIMA-related kinase 1 acts_upstream_of_or_within ISO MGI:1858122 (PMID:15604234) RGD PMID:15604234 NCBI chr16:28,998,229...29,125,426
Ensembl chr16:28,998,231...29,117,723 		JBrowse link
G Nek4 NIMA-related kinase 4 involved_in ISO
IBA		 (PMID:22851694)
GO_REF:0000033		 RGD
GO_Central		 PMID:22851694 GO_REF:0000033 NCBI chr16:6,144,900...6,185,376
Ensembl chr16:6,144,959...6,188,932 		JBrowse link
G Nfat5 nuclear factor of activated T-cells 5 involved_in ISO
ISS		 (PMID:34049076)
GO_REF:0000024		 RGD
UniProt		 PMID:34049076 GO_REF:0000024 NCBI chr19:35,199,737...35,286,675
Ensembl chr19:35,199,016...35,286,675 		JBrowse link
G Nfatc2 nuclear factor of activated T-cells 2 involved_in ISO (PMID:17875758) RGD PMID:17875758 NCBI chr 3:157,195,970...157,328,640
Ensembl chr 3:157,198,872...157,328,325 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO (PMID:17468178) RGD PMID:17468178 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in ISO (PMID:20395202) RGD PMID:20395202 NCBI chr15:44,473,851...44,476,443
Ensembl chr15:44,473,851...44,476,441 		JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:27829214) RGD PMID:27829214 NCBI chr 1:76,629,084...76,636,902
Ensembl chr 1:76,629,069...76,636,902 		JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (PMID:18819933) RGD PMID:18819933 NCBI chr 9:41,463,361...41,642,322
Ensembl chr 9:41,463,830...41,642,320 		JBrowse link
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in ISO (PMID:29902117) RGD PMID:29902117 NCBI chr 6:119,405,103...119,446,861
Ensembl chr 6:119,404,334...119,448,915 		JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component involved_in ISS
ISO		 GO_REF:0000024
(PMID:18086888)		 UniProt
RGD		 PMID:18086888 GO_REF:0000024 NCBI chr 1:180,030,355...180,058,541
Ensembl chr 1:180,030,160...180,058,417 		JBrowse link
G Nsmce4a NSE4 homolog A, SMC5-SMC6 complex component involved_in ISO (PMID:18086888) RGD PMID:18086888 NCBI chr 1:185,102,075...185,109,166
Ensembl chr 1:185,094,360...185,109,166 		JBrowse link
G Nuggc nuclear GTPase, germinal center associated acts_upstream_of_or_within ISO MGI:5449552 (PMID:22833677) RGD PMID:22833677 NCBI chr15:39,821,851...39,866,122
Ensembl chr15:39,821,855...39,866,122 		JBrowse link
G Nupr2 nuclear protein 2, transcriptional regulator involved_in ISO (PMID:25899918) RGD PMID:25899918 NCBI chr12:26,800,123...26,803,228
Ensembl chr12:26,799,800...26,803,304 		JBrowse link
G Oard1 O-acyl-ADP-ribose deacylase 1 involved_in ISO (PMID:23481255) RGD PMID:23481255 NCBI chr 9:12,576,894...12,587,264
Ensembl chr 9:12,578,970...12,587,249 		JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within ISO UniProtKB:P43351 (PMID:19506022) RGD PMID:19506022 NCBI chr 4:146,474,701...146,481,959
Ensembl chr 4:146,474,750...146,484,766 		JBrowse link
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20725033)		 UniProt
RGD		 PMID:20725033 GO_REF:0000024 NCBI chr 1:204,387,215...204,395,495
Ensembl chr 1:204,387,215...204,395,483 		JBrowse link
G Pagr1 Paxip1-associated glutamate-rich protein 1 involved_in ISO (MGI:3844416|PMID:19124460) RGD PMID:19124460 MGI:3844416 NCBI chr 1:181,622,698...181,625,024 JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23260667)		 UniProt
RGD		 PMID:23260667 GO_REF:0000024 NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383 		JBrowse link
G Parg poly (ADP-ribose) glycohydrolase acts_upstream_of_or_within ISO MGI:3052740 (PMID:15282315) RGD PMID:15282315 NCBI chr16:7,436,429...7,544,276
Ensembl chr16:7,436,476...7,544,273 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in
acts_upstream_of_or_within		 IDA
ISO
ISS		 (PMID:22683995), (PMID:24289924), (PMID:27067600), (PMID:27248496), (PMID:32358582), (PMID:35013556), (PMID:35393539), (PMID:37823600)
(PMID:24550317)
GO_REF:0000024		 RGD
UniProt		 PMID:22683995 PMID:24289924 PMID:24550317 PMID:27067600 PMID:27248496 More... GO_REF:0000024, RGD:1601082 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 involved_in ISO (PMID:34108479) RGD PMID:34108479 NCBI chr15:24,034,069...24,044,340
Ensembl chr15:24,034,106...24,044,338 		JBrowse link
G Paxip1 PAX interacting protein 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:3844416|PMID:19124460)
(PMID:17500065)		 RGD PMID:17500065 PMID:19124460 MGI:3844416 NCBI chr 4:7,525,132...7,576,659
Ensembl chr 4:7,525,004...7,576,548 		JBrowse link
G Paxx PAXX, non-homologous end joining factor involved_in ISO (PMID:25574025) RGD PMID:25574025 NCBI chr 3:8,274,762...8,276,322
Ensembl chr 3:8,274,762...8,276,521 		JBrowse link
G Pclaf PCNA clamp associated factor involved_in ISS
ISO		 GO_REF:0000024
(PMID:21628590), (PMID:23000965)		 UniProt
RGD		 PMID:21628590 PMID:23000965 GO_REF:0000024 NCBI chr 8:66,420,606...66,432,994
Ensembl chr 8:66,420,587...66,432,994
Ensembl chr 8:66,420,587...66,432,994 		JBrowse link
G Pias1 protein inhibitor of activated STAT, 1 involved_in ISO (PMID:36050397) RGD PMID:36050397 NCBI chr 8:63,338,150...63,451,670
Ensembl chr 8:63,338,150...63,438,905 		JBrowse link
G Pidd1 p53-induced death domain protein 1 involved_in ISO (PMID:21726810) RGD PMID:21726810 NCBI chr 1:196,536,815...196,542,808
Ensembl chr 1:196,536,834...196,542,699 		JBrowse link
G Pierce1 piercer of microtubule wall 1 acts_upstream_of_or_within ISO (PMID:21159655) RGD PMID:21159655 NCBI chr 3:11,797,031...11,801,568
Ensembl chr 3:11,797,031...11,801,568 		JBrowse link
G Plk3 polo-like kinase 3 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(MGI:5142362|PMID:21376736)
(PMID:16481012), (PMID:19490146)		 UniProt
GO_Central
RGD		 PMID:16481012 PMID:19490146 PMID:21376736 GO_REF:0000024 GO_REF:0000033 MGI:5142362 NCBI chr 5:130,607,142...130,612,317
Ensembl chr 5:130,607,142...130,612,317 		JBrowse link
G Plk5 polo-like kinase 5 involved_in ISO
IBA		 (MGI:5009782|PMID:20100802)
GO_REF:0000033		 RGD
GO_Central		 PMID:20100802 GO_REF:0000033 MGI:5009782 NCBI chr 7:9,346,777...9,367,923
Ensembl chr 7:9,346,777...9,355,196 		JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 acts_upstream_of_or_within ISO MGI:2678372 (PMID:12952892) RGD PMID:12952892 NCBI chr18:59,986,020...59,992,434
Ensembl chr18:59,986,017...59,992,429 		JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component acts_upstream_of_or_within ISO MGI:1353455|MGI:1857947 (PMID:16204034) RGD PMID:16204034 NCBI chr12:10,676,818...10,701,161
Ensembl chr12:10,676,764...10,701,066 		JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase involved_in ISO (MGI:5780352|PMID:26774286) RGD PMID:26774286 MGI:5780352 NCBI chr 1:95,341,465...95,346,921
Ensembl chr 1:95,341,620...95,346,920 		JBrowse link
G Polb DNA polymerase beta involved_in ISO
ISS		 (PMID:21362556)
GO_REF:0000024		 RGD
UniProt		 PMID:21362556 GO_REF:0000024 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:75,973,941...75,977,175
Ensembl chr 5:75,974,717...75,977,231
Ensembl chr 7:75,974,717...75,977,231 		JBrowse link
G Pole3-ps2 DNA polymerase epsilon 3, accessory subunit, pseudogene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:26,135,927...26,136,417
Ensembl chr17:26,135,927...26,136,235
Ensembl chr17:26,135,927...26,136,235 		JBrowse link
G Polk DNA polymerase kappa involved_in ISO (PMID:28297716) RGD PMID:28297716 NCBI chr 2:27,822,228...27,882,331
Ensembl chr 2:27,822,679...27,882,313 		JBrowse link
G Polq DNA polymerase theta involved_in ISO (PMID:25642963), (PMID:25643323) RGD PMID:25642963 PMID:25643323 NCBI chr11:63,673,796...63,775,905
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Ppp4r3a protein phosphatase 4, regulatory subunit 3A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:120,302,508...120,365,907
Ensembl chr 6:120,302,511...120,365,891 		JBrowse link
G Ppp4r3b protein phosphatase 4, regulatory subunit 3B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:102,917,043...102,965,210
Ensembl chr14:102,917,443...103,068,192 		JBrowse link
G Ppp4r3cl1 protein phosphatase 4 regulatory subunit 3C like 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr  X:56,396,491...56,399,835
Ensembl chr  X:56,396,804...56,399,326 		JBrowse link
G Ppp4r3cl2 protein phosphatase 4 regulatory subunit 3C like 2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr  X:54,782,250...54,889,938
Ensembl chr  X:54,782,268...54,889,921 		JBrowse link
G Ppp4r3cl3 protein phosphatase 4 regulatory subunit 3C like 3 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr  X:55,009,116...55,012,319
Ensembl chr  X:55,009,467...55,012,137 		JBrowse link
G Prap1 proline-rich acidic protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23235459)		 UniProt
RGD		 PMID:23235459 GO_REF:0000024 NCBI chr 1:194,883,078...194,886,874
Ensembl chr 1:194,883,078...194,886,872 		JBrowse link
G Prkcd protein kinase C, delta involved_in ISO
IEA		 (PMID:17938203)
GO_REF:0000107		 RGD
Ensembl		 PMID:17938203 GO_REF:0000107 NCBI chr16:5,769,217...5,799,380
Ensembl chr16:5,769,215...5,799,352 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:26237645), (PMID:29478807), (PMID:35460603) RGD PMID:26237645 PMID:29478807 PMID:35460603 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 involved_in ISO (PMID:15741314), (PMID:16294045) RGD PMID:15741314 PMID:16294045 NCBI chr 1:95,458,853...95,468,176
Ensembl chr 1:95,458,850...95,468,345 		JBrowse link
G Psen1 presenilin 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:25542424)
MGI:1930937 (PMID:12460542)		 RGD PMID:12460542 PMID:25542424 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Psme4 proteasome activator subunit 4 involved_in ISO (MGI:5494329|PMID:23706739) RGD PMID:23706739 MGI:5494329 NCBI chr14:104,505,716...104,609,410
Ensembl chr14:104,505,716...104,609,408 		JBrowse link
G Rad17 RAD17 checkpoint clamp loader component involved_in
acts_upstream_of_or_within		 ISO (PMID:15538388)
MGI:3056344 (PMID:15297881)		 RGD PMID:15297881 PMID:15538388 NCBI chr 2:31,764,260...31,794,542
Ensembl chr 2:31,764,261...31,794,072 		JBrowse link
G Rad18 RAD18 E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within		 ISO (PMID:22036607), (PMID:25931565)
MGI:3835812 (PMID:12509447)
(PMID:25023518)		 RGD PMID:12509447 PMID:22036607 PMID:25023518 PMID:25931565 NCBI chr 4:145,735,654...145,821,102
Ensembl chr 4:145,735,654...145,821,069 		JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein acts_upstream_of_or_within ISO MGI:105128 (PMID:12815074) RGD PMID:12815074 NCBI chr19:23,313,563...23,320,702
Ensembl chr19:23,314,797...23,320,695 		JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein acts_upstream_of_or_within ISO (PMID:12815074) RGD PMID:12815074 NCBI chr 5:70,090,232...70,128,340
Ensembl chr 5:70,090,232...70,128,319 		JBrowse link
G Rad50 RAD50 double strand break repair protein acts_upstream_of_or_within IEP
ISO		 cyclophosphamide
(PMID:17500065)		 RGD PMID:17500065 PMID:11056294 RGD:727220 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:17996710), (PMID:17996711), (PMID:23509288), (PMID:25585578), (PMID:26681308), (PMID:27239033) RGD PMID:17996710 PMID:17996711 PMID:23509288 PMID:25585578 PMID:26681308 More... NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO (PMID:17996710), (PMID:17996711) RGD PMID:17996710 PMID:17996711 NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rad51d RAD51 paralog D acts_upstream_of_or_within ISO (PMID:20813759) RGD PMID:20813759 NCBI chr10:67,805,720...67,824,452
Ensembl chr10:67,740,712...67,824,434 		JBrowse link
G Rad54b RAD54 homolog B acts_upstream_of_or_within ISO MGI:107202|MGI:3617695 (PMID:16428451), (PMID:19061978) RGD PMID:16428451 PMID:19061978 NCBI chr 5:25,032,112...25,104,630
Ensembl chr 5:25,032,066...25,104,616 		JBrowse link
G Rad54l RAD54 like acts_upstream_of_or_within ISO MGI:107202|MGI:2183934 (PMID:16428451), (PMID:19061978) RGD PMID:16428451 PMID:19061978 NCBI chr 5:129,575,431...129,605,100
Ensembl chr 5:129,575,378...129,605,070 		JBrowse link
G Rad9a RAD9 checkpoint clamp component A involved_in ISO (PMID:9872989) RGD PMID:9872989 NCBI chr 1:201,488,511...201,553,582
Ensembl chr 1:201,487,136...201,553,608 		JBrowse link
G Rassf1 Ras association domain family member 1 involved_in ISO (PMID:18566590) RGD PMID:18566590 NCBI chr 8:108,225,023...108,236,164
Ensembl chr 8:108,225,023...108,236,164 		JBrowse link
G Rbbp5 RB binding protein 5, histone lysine methyltransferase complex subunit acts_upstream_of_or_within ISO (PMID:17500065) RGD PMID:17500065 NCBI chr13:43,912,254...43,939,107
Ensembl chr13:43,912,254...43,939,107 		JBrowse link
G Rbbp6 RB binding protein 6, ubiquitin ligase involved_in ISO (PMID:24726359) RGD PMID:24726359 NCBI chr 1:177,503,988...177,537,397
Ensembl chr 1:177,503,313...177,535,678 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:24356969) RGD PMID:24356969 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102 		JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:22118460)
(MGI:6867266|PMID:22118460)		 RGD PMID:22118460 MGI:6867266 NCBI chr 7:112,976,863...113,001,051
Ensembl chr 7:112,990,835...113,001,051 		JBrowse link
G Rfwd3 ring finger and WD repeat domain 3 involved_in ISO (PMID:26474068), (PMID:28575657), (PMID:28575658) RGD PMID:26474068 PMID:28575657 PMID:28575658 NCBI chr19:39,235,883...39,268,479
Ensembl chr19:39,236,787...39,268,479 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO (PMID:28241136) RGD PMID:28241136 NCBI chr 3:36,554,689...36,607,961
Ensembl chr 3:36,554,697...36,603,617 		JBrowse link
G Rnf168 ring finger protein 168 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19500350), (PMID:20550933), (PMID:22373579), (PMID:22508508), (PMID:22980979)		 UniProt
RGD		 PMID:19500350 PMID:20550933 PMID:22373579 PMID:22508508 PMID:22980979 GO_REF:0000024 NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Rnf169 ring finger protein 169 involved_in ISO (PMID:22492721), (PMID:22733822) RGD PMID:22492721 PMID:22733822 NCBI chr 1:154,250,462...154,311,867
Ensembl chr 1:154,254,473...154,311,653 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5293246|PMID:21857671)
(PMID:20550933), (PMID:21911360), (PMID:22266820), (PMID:22373579), (PMID:22980979)		 UniProt
RGD		 PMID:20550933 PMID:21857671 PMID:21911360 PMID:22266820 PMID:22373579 More... GO_REF:0000024 MGI:5293246 NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Rpa1 replication protein A1 involved_in ISO (PMID:27248496) RGD PMID:27248496 NCBI chr10:60,148,869...60,199,970
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO
IDA		 (PMID:17560175)
PMID:20605787		 RGD PMID:17560175 PMID:20605787 RGD:10402036 NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:28834754), (PMID:29670289) RGD PMID:28834754 PMID:29670289 NCBI chr 3:145,761,549...145,794,420
Ensembl chr 3:145,761,558...145,794,386 		JBrowse link
G Setd7 SET domain containing 7, histone lysine methyltransferase acts_upstream_of_or_within ISO (PMID:23509280) RGD PMID:23509280 NCBI chr 2:135,562,683...135,605,468
Ensembl chr 2:135,562,683...135,605,468 		JBrowse link
G Setx senataxin involved_in ISO (PMID:17562789) RGD PMID:17562789 NCBI chr 3:12,428,091...12,480,801
Ensembl chr 3:12,427,635...12,480,803 		JBrowse link
G Sfpq splicing factor proline and glutamine rich acts_upstream_of_or_within ISO (PMID:20813759) RGD PMID:20813759 NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472 		JBrowse link
G Sgk1 serum/glucocorticoid regulated kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15383658)		 Ensembl
RGD		 PMID:15383658 GO_REF:0000107 NCBI chr 1:22,980,257...23,098,122
Ensembl chr 1:22,980,261...23,098,283 		JBrowse link
G Shprh SNF2 histone linker PHD RING helicase acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:25023518)
GO_REF:0000033		 RGD
GO_Central		 PMID:25023518 GO_REF:0000033 NCBI chr 1:5,528,827...5,602,537
Ensembl chr 1:5,528,888...5,602,527 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:18203716) RGD PMID:18203716 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Sirt4 sirtuin 4 involved_in ISO (MGI:5490691|PMID:23562301) RGD PMID:23562301 MGI:5490691 NCBI chr12:41,125,533...41,139,440
Ensembl chr12:41,131,262...41,139,439 		JBrowse link
G Sirt7 sirtuin 7 involved_in ISO (PMID:30944854) RGD PMID:30944854 NCBI chr10:105,896,476...105,903,301
Ensembl chr10:105,896,476...105,903,172 		JBrowse link
G Slf1 SMC5-SMC6 complex localization factor 1 involved_in ISO (PMID:25931565)
(MGI:5688834|PMID:22036607)		 RGD PMID:22036607 PMID:25931565 MGI:5688834 NCBI chr 2:6,767,015...6,874,428
Ensembl chr 2:6,767,015...6,867,149 		JBrowse link
G Slf2 SMC5-SMC6 complex localization factor 2 involved_in ISO
IBA		 (PMID:25931565)
GO_REF:0000033		 RGD
GO_Central		 PMID:25931565 GO_REF:0000033 NCBI chr 1:243,782,786...243,845,418
Ensembl chr 1:243,782,246...243,845,250 		JBrowse link
G Slfn9 schlafen family member 9 involved_in ISO (PMID:29395061) RGD PMID:29395061 NCBI chr10:67,909,105...67,955,912
Ensembl chr10:67,909,106...67,925,383 		JBrowse link
G Smarcal1 Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19793862)		 UniProt
RGD		 PMID:19793862 GO_REF:0000024 NCBI chr 9:74,239,718...74,286,156
Ensembl chr 9:74,240,241...74,286,146 		JBrowse link
G Smc5 structural maintenance of chromosomes 5 involved_in ISO (PMID:11408570), (PMID:25931565) RGD PMID:11408570 PMID:25931565 NCBI chr 1:220,769,366...220,839,138
Ensembl chr 1:220,769,366...220,839,096 		JBrowse link
G Smc6 structural maintenance of chromosomes 6 involved_in ISO (PMID:11408570), (PMID:25931565) RGD PMID:11408570 PMID:25931565 NCBI chr 6:33,978,730...34,033,201
Ensembl chr 6:33,978,716...34,031,746 		JBrowse link
G Smg1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase involved_in ISO (PMID:15175154) RGD PMID:15175154 NCBI chr 1:172,441,892...172,543,667
Ensembl chr 1:172,444,936...172,543,698 		JBrowse link
G Spata18 spermatogenesis associated 18 involved_in ISO
IEA
ISS		 (PMID:21264221)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:21264221 GO_REF:0000024 GO_REF:0000107 NCBI chr14:34,531,931...34,558,671
Ensembl chr14:34,531,061...34,558,687 		JBrowse link
G Spdya speedy/RINGO cell cycle regulator family member A involved_in ISO (PMID:12839962) RGD PMID:12839962 NCBI chr 6:23,905,574...23,954,926
Ensembl chr 6:23,910,223...23,954,850 		JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO (PMID:23509288) RGD PMID:23509288 NCBI chr11:84,766,593...85,007,597
Ensembl chr11:84,766,593...85,007,600 		JBrowse link
G Spindoc spindlin interactor and repressor of chromatin binding involved_in ISO (PMID:34737271) RGD PMID:34737271 NCBI chr 1:204,541,647...204,565,109
Ensembl chr 1:204,542,335...204,564,144 		JBrowse link
G Sprtn SprT-like N-terminal domain involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:22681887), (PMID:22894931), (PMID:22902628), (PMID:23042605), (PMID:23042607), (PMID:27852435), (PMID:27871365), (PMID:27871366), (PMID:32649882), (PMID:36608669)		 UniProt
GO_Central
RGD		 PMID:22681887 PMID:22894931 PMID:22902628 PMID:23042605 PMID:23042607 More... GO_REF:0000024 GO_REF:0000033 NCBI chr19:52,857,612...52,864,864
Ensembl chr19:52,857,866...52,864,864 		JBrowse link
G Stk11 serine/threonine kinase 11 involved_in ISO
IBA		 (PMID:25329316)
GO_REF:0000033
(MGI:5613877|PMID:25329316)		 RGD
GO_Central		 PMID:25329316 GO_REF:0000033 MGI:5613877 NCBI chr 7:9,574,553...9,591,315
Ensembl chr 7:9,575,269...9,591,315 		JBrowse link
G Stk38 serine/threonine kinase 38 involved_in ISO (PMID:32537488) RGD PMID:32537488 NCBI chr20:7,034,245...7,067,803
Ensembl chr20:7,034,242...7,068,198 		JBrowse link
G Stxbp4 syntaxin binding protein 4 involved_in ISO (PMID:19451233) RGD PMID:19451233 NCBI chr10:75,301,868...75,458,741
Ensembl chr10:75,305,463...75,458,663 		JBrowse link
G Susd6 sushi domain containing 6 involved_in ISO
IBA		 (PMID:24652652)
GO_REF:0000033		 RGD
GO_Central		 PMID:24652652 GO_REF:0000033 NCBI chr 6:100,437,834...100,531,621
Ensembl chr 6:100,437,642...100,531,606 		JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within ISO (PMID:23509280) RGD PMID:23509280 NCBI chr  X:14,421,028...14,433,993
Ensembl chr  X:14,421,109...14,433,982 		JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 acts_upstream_of_or_within ISO (PMID:23509280) RGD PMID:23509280 NCBI chr  X:141,792,589...141,795,257 JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:24289924) RGD PMID:24289924 NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543 		JBrowse link
G Tank TRAF family member-associated NFKB activator involved_in ISO (PMID:25861989) RGD PMID:25861989 NCBI chr 3:46,114,230...46,190,270
Ensembl chr 3:46,114,274...46,190,264 		JBrowse link
G Taok1 TAO kinase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17396146)		 UniProt
RGD		 PMID:17396146 GO_REF:0000024 NCBI chr10:62,373,072...62,465,295
Ensembl chr10:62,381,404...62,465,766 		JBrowse link
G Taok2 TAO kinase 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17396146)		 UniProt
RGD		 PMID:17396146 GO_REF:0000024 NCBI chr 1:181,475,708...181,494,738
Ensembl chr 1:181,475,711...181,494,613 		JBrowse link
G Taok3 TAO kinase 3 involved_in ISO
ISS		 (PMID:17396146)
GO_REF:0000024		 RGD
UniProt		 PMID:17396146 GO_REF:0000024 NCBI chr12:39,312,354...39,473,656
Ensembl chr12:39,314,027...39,461,244 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in ISO (PMID:25928429) RGD PMID:25928429 NCBI chr 4:159,927,136...159,946,077
Ensembl chr 4:159,927,139...159,946,029 		JBrowse link
G Timeless timeless circadian regulator involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5578016|PMID:23418588)
(PMID:23797032)		 UniProt
Ensembl
RGD		 PMID:23418588 PMID:23797032 GO_REF:0000024 GO_REF:0000107 MGI:5578016 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738 		JBrowse link
G Tipin timeless interacting protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:64,780,813...64,801,358
Ensembl chr 8:64,780,828...64,801,352 		JBrowse link
G Tlk2 tousled-like kinase 2 involved_in ISO (PMID:12660173) RGD PMID:12660173 NCBI chr10:90,154,449...90,248,562
Ensembl chr10:90,156,813...90,248,561 		JBrowse link
G Top2a DNA topoisomerase II alpha involved_in IEA
ISO		 GO_REF:0000107
(PMID:16611985)		 Ensembl
RGD		 PMID:16611985 GO_REF:0000107 NCBI chr10:83,945,731...83,976,874
Ensembl chr10:83,945,735...83,976,874 		JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in ISO (PMID:12773567), (PMID:30898438), (PMID:35842428), (PMID:37165191), (PMID:37316668) RGD PMID:12773567 PMID:30898438 PMID:35842428 PMID:37165191 PMID:37316668 NCBI chr 8:103,887,805...103,931,662
Ensembl chr 8:103,887,865...103,931,674 		JBrowse link
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase involved_in
acts_upstream_of_or_within		 ISO (PMID:15735665) RGD PMID:15735665 NCBI chr 5:55,388,033...55,399,937
Ensembl chr 5:55,387,632...55,399,937 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1857590|MGI:1926340 (PMID:11092819), (PMID:12952892), (PMID:14744935), (PMID:15383658), (PMID:17591690)
(PMID:15710329), (PMID:17938203), (PMID:24356969), (PMID:30089260)
(PMID:14744935)		 UniProt
RGD		 PMID:11092819 PMID:12952892 PMID:14744935 PMID:15383658 PMID:15710329 More... GO_REF:0000024 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:17500065)
(PMID:27153538), (PMID:28241136)		 RGD PMID:17500065 PMID:27153538 PMID:28241136 NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Tp63 tumor protein p63 involved_in ISO (PMID:19451233) RGD PMID:19451233 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398 		JBrowse link
G Tp73 tumor protein p73 involved_in
acts_upstream_of_or_within		 ISO (PMID:18174154)
(PMID:16044147)		 RGD PMID:16044147 PMID:18174154 NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507 		JBrowse link
G Traip TRAF-interacting protein involved_in ISO (PMID:26711499), (PMID:27462463) RGD PMID:26711499 PMID:27462463 NCBI chr 8:108,641,860...108,661,640
Ensembl chr 8:108,641,852...108,661,638 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:20511593) RGD PMID:20511593 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
G Trip12 thyroid hormone receptor interactor 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:85,916,691...86,043,312
Ensembl chr 9:85,916,691...86,051,403 		JBrowse link
G Ttc5 tetratricopeptide repeat domain 5 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6810701|PMID:18833288), (MGI:6810702|PMID:15448695)		 UniProt
RGD		 PMID:15448695 PMID:18833288 GO_REF:0000024 MGI:6810701 MGI:6810702 NCBI chr15:23,993,046...24,010,710
Ensembl chr15:23,993,048...24,010,668 		JBrowse link
G Uba1 ubiquitin-like modifier activating enzyme 1 involved_in ISO
IEA
IBA		 (PMID:22456334)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107		 RGD
TreeGrafter
GO_Central
Ensembl		 PMID:22456334 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:1,508,700...1,530,677
Ensembl chr  X:1,508,666...1,530,636 		JBrowse link
G Uba1y ubiquitin-activating enzyme, Chr Y involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  Y:457,617...480,306
Ensembl chr  Y:459,843...480,216 		JBrowse link
G Uba6 ubiquitin-like modifier activating enzyme 6 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr14:21,884,039...21,947,857
Ensembl chr14:21,884,039...21,947,857 		JBrowse link
G Uba7 ubiquitin-like modifier activating enzyme 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:108,665,289...108,674,097
Ensembl chr 8:108,665,292...108,674,099 		JBrowse link
G Ube1y1 ubiquitin-like modifier-activating enzyme 1 Y involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr  Y:786,728...809,248
Ensembl chr  Y:788,868...809,233 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B involved_in ISO (PMID:14981545) RGD PMID:14981545 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
G Ube2e2 ubiquitin-conjugating enzyme E2E 2 acts_upstream_of_or_within ISO (PMID:21628527) RGD PMID:21628527 NCBI chr15:6,980,241...7,257,912
Ensembl chr15:6,980,474...7,257,532 		JBrowse link
G Ube2t ubiquitin-conjugating enzyme E2T involved_in ISO
IBA		 (PMID:16916645)
GO_REF:0000033		 RGD
GO_Central		 PMID:16916645 GO_REF:0000033 NCBI chr13:46,403,352...46,413,854
Ensembl chr13:46,403,375...46,414,835 		JBrowse link
G Ubqln4 ubiquilin 4 involved_in ISO (PMID:30612738) RGD PMID:30612738 NCBI chr 2:174,012,726...174,028,062
Ensembl chr 2:174,012,777...174,028,059 		JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in ISO (PMID:12011095) RGD PMID:12011095 NCBI chr 7:69,115,216...69,224,843
Ensembl chr 7:69,116,761...69,224,903 		JBrowse link
G Ufl1 Ufm1-specific ligase 1 involved_in ISO
ISS		 (PMID:30783677), (PMID:32807901)
GO_REF:0000024		 RGD
UniProt		 PMID:30783677 PMID:32807901 GO_REF:0000024 NCBI chr 5:38,962,721...38,995,134
Ensembl chr 5:38,962,171...38,995,199 		JBrowse link
G Usp10 ubiquitin specific peptidase 10 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25861989)		 UniProt
RGD		 PMID:25861989 GO_REF:0000024 NCBI chr19:47,972,858...48,014,900
Ensembl chr19:47,972,611...48,014,897 		JBrowse link
G Usp16 ubiquitin specific peptidase 16 involved_in ISO
ISS		 (PMID:20550933)
GO_REF:0000024		 RGD
UniProt		 PMID:20550933 GO_REF:0000024 NCBI chr11:26,681,359...26,711,313
Ensembl chr11:26,681,414...26,710,539 		JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in ISO (PMID:17873522) RGD PMID:17873522 NCBI chr 8:49,325,766...49,386,229
Ensembl chr 8:49,325,867...49,386,229 		JBrowse link
G Usp47 ubiquitin specific peptidase 47 involved_in ISO (PMID:21362556) RGD PMID:21362556 NCBI chr 1:166,152,104...166,235,312
Ensembl chr 1:166,152,199...166,235,312 		JBrowse link
G Usp51 ubiquitin specific peptidase 51 involved_in ISO (PMID:27083998), (PMID:34188037) RGD PMID:27083998 PMID:34188037 NCBI chr  X:18,374,940...18,381,472
Ensembl chr  X:18,376,930...18,379,888 		JBrowse link
G Vav3 vav guanine nucleotide exchange factor 3 involved_in ISO (PMID:17875758) RGD PMID:17875758 NCBI chr 2:197,011,901...197,354,321
Ensembl chr 2:197,011,831...197,354,321 		JBrowse link
G Vcp valosin-containing protein involved_in ISO
ISS		 (PMID:16140914), (PMID:22120668), (PMID:23042605)
GO_REF:0000024		 RGD
UniProt		 PMID:16140914 PMID:22120668 PMID:23042605 GO_REF:0000024 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Vcpip1 valosin containing protein interacting protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:32649882)		 UniProt
RGD		 PMID:32649882 GO_REF:0000024 NCBI chr 5:9,534,247...9,560,889
Ensembl chr 5:9,534,129...9,562,040 		JBrowse link
G Vrk1 VRK serine/threonine kinase 1 involved_in ISO (PMID:33076429) RGD PMID:33076429 NCBI chr 6:124,914,770...124,981,508
Ensembl chr 6:124,914,855...124,981,436 		JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in ISO (PMID:21329877) RGD PMID:21329877 NCBI chr17:55,922,686...55,984,286
Ensembl chr17:55,923,123...55,982,301 		JBrowse link
G Wdr48 WD repeat domain 48 involved_in
acts_upstream_of_or_within		 ISO (PMID:27239033), (PMID:27463890)
MGI:3877670 (PMID:24001775)		 RGD PMID:24001775 PMID:27239033 PMID:27463890 NCBI chr 8:119,622,053...119,655,264
Ensembl chr 8:119,622,048...119,655,264 		JBrowse link
G Wdr76 WD repeat domain 76 involved_in ISO (PMID:27248496) RGD PMID:27248496 NCBI chr 3:108,456,784...108,491,528
Ensembl chr 3:108,456,815...108,490,840 		JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:18203716) RGD PMID:18203716 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Xiap X-linked inhibitor of apoptosis involved_in ISO
IEA		 (PMID:18049476)
GO_REF:0000107		 RGD
Ensembl		 PMID:18049476 GO_REF:0000107 NCBI chr  X:120,890,537...120,938,413
Ensembl chr  X:120,897,907...120,934,700 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within ISO MGI:1859840 (PMID:15010313) RGD PMID:15010313 NCBI chr 4:123,993,670...124,020,922
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 IEP RGD PMID:11056294 RGD:727220 NCBI chr 1:80,140,495...80,168,705
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
G Xrcc2 X-ray repair cross complementing 2 acts_upstream_of_or_within ISO MGI:2662686|MGI:3654106 (PMID:15979950), (PMID:16777961) RGD PMID:15979950 PMID:16777961 NCBI chr 4:9,423,873...9,502,980
Ensembl chr 4:9,423,898...9,442,482 		JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in ISO (PMID:27248496) RGD PMID:27248496 NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 acts_upstream_of_or_within ISO MGI:2179954 (PMID:15979950) RGD PMID:15979950 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO
IEA		 (PMID:18280240)
GO_REF:0000107		 RGD
Ensembl		 PMID:18280240 GO_REF:0000107 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:18026119)
(MGI:5009388|PMID:18026119)		 RGD PMID:18026119 MGI:5009388 NCBI chr 6:127,706,739...127,736,499
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:24657165) RGD PMID:24657165 NCBI chr 6:95,096,838...95,125,811
Ensembl chr 6:95,096,387...95,118,996 		JBrowse link
G Zbtb38 zinc finger and BTB domain containing 38 involved_in ISO
IEA
ISS		 (PMID:24726359)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:24726359 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:97,284,617...97,288,518
Ensembl chr 8:97,280,993...97,485,625 		JBrowse link
G Zbtb4 zinc finger and BTB domain containing 4 involved_in ISO (PMID:19448668) RGD PMID:19448668 NCBI chr10:54,480,698...54,501,492
Ensembl chr10:54,485,071...54,501,492 		JBrowse link
G Zbtb40 zinc finger and BTB domain containing 40 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17525332)		 UniProt
RGD		 PMID:17525332 GO_REF:0000024 NCBI chr 5:149,216,496...149,283,746
Ensembl chr 5:149,219,677...149,254,415 		JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISS
ISO		 GO_REF:0000024
(PMID:25861989)		 UniProt
RGD		 PMID:25861989 GO_REF:0000024 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351 		JBrowse link
G Zdhhc16 zinc finger DHHC-type palmitoyltransferase 16 involved_in ISO (MGI:6094469|PMID:27159997) RGD PMID:27159997 MGI:6094469 NCBI chr 1:240,745,606...240,757,009
Ensembl chr 1:240,745,641...240,757,009 		JBrowse link
G Zfp385a zinc finger protein 385A involved_in ISO (MGI:5508602|PMID:17719541) RGD PMID:17719541 MGI:5508602 NCBI chr 7:134,448,914...134,475,548
Ensembl chr 7:134,448,921...134,475,548 		JBrowse link
G Zmat3 zinc finger, matrin type 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:115,106,046...115,136,888
Ensembl chr 2:115,106,966...115,136,863 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033 (PMID:15980864), (PMID:16079796), (PMID:21522133) RGD PMID:15980864 PMID:16079796 PMID:21522133 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110 		JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 involved_in ISO (PMID:22704558), (PMID:22705370), (PMID:22759634) RGD PMID:22704558 PMID:22705370 PMID:22759634 NCBI chr13:39,440,653...39,595,782
Ensembl chr13:39,440,889...39,595,670 		JBrowse link
base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISO
IBA
IEA		 (PMID:8932386)
GO_REF:0000033
GO_REF:0000118		 RGD
GO_Central
TreeGrafter		 PMID:8932386 GO_REF:0000033 GO_REF:0000118 NCBI chr15:24,144,595...24,146,785
Ensembl chr15:24,144,362...24,146,785 		JBrowse link
G Apex2 apurinic/apyrimidinic endodeoxyribonuclease 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:19,425,684...19,508,459
Ensembl chr  X:19,487,419...19,508,439 		JBrowse link
G Apex2l1 APEX nuclease (apurinic/apyrimidinic endonuclease) 2-like 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr14:67,166,252...67,168,138
Ensembl chr14:67,166,530...67,168,080 		JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:9973627) RGD PMID:9973627 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Fen1 flap structure-specific endonuclease 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:206,845,126...206,849,821
Ensembl chr 1:206,844,884...206,850,003 		JBrowse link
G Hmga1 high mobility group AT-hook 1 involved_in ISO (PMID:19465398) RGD PMID:19465398 NCBI chr20:5,611,088...5,618,755
Ensembl chr20:5,611,694...5,618,752 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO
ISS		 (PMID:19465398)
GO_REF:0000024		 RGD
UniProt		 PMID:19465398 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:3722031|PMID:17803946) RGD PMID:17803946 MGI:3722031 NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000118
(PMID:19713937)		 UniProt
TreeGrafter
RGD		 PMID:19713937 GO_REF:0000024 GO_REF:0000118 NCBI chr  X:20,873,795...21,001,378
Ensembl chr  X:20,873,795...21,001,262 		JBrowse link
G Lig1 DNA ligase 1 involved_in ISO
IEA		 (PMID:19589734)
GO_REF:0000107		 RGD
Ensembl		 PMID:19589734 GO_REF:0000107 NCBI chr 1:74,165,688...74,204,400
Ensembl chr 1:74,165,842...74,204,413 		JBrowse link
G Mpg N-methylpurine-DNA glycosylase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000002
MGI:2148592|MGI:2675730 (PMID:15177041), (PMID:9371767)
GO_REF:0000033
GO_REF:0000118		 InterPro
RGD
GO_Central
TreeGrafter		 PMID:9371767 PMID:15177041 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr10:15,396,246...15,402,528
Ensembl chr10:15,395,782...15,402,520 		JBrowse link
G Mutyh mutY DNA glycosylase involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033
GO_REF:0000118
GO_REF:0000002		 UniProt
GO_Central
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr 5:130,274,034...130,286,149
Ensembl chr 5:130,274,122...130,286,146 		JBrowse link
G Neil1 nei-like DNA glycosylase 1 involved_in ISO
IBA		 (PMID:17611195)
GO_REF:0000033		 RGD
GO_Central		 PMID:17611195 GO_REF:0000033 NCBI chr 8:57,550,142...57,556,884
Ensembl chr 8:57,550,147...57,556,258 		JBrowse link
G Neil2 nei-like DNA glycosylase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:37,444,676...37,454,863
Ensembl chr15:37,445,381...37,454,863 		JBrowse link
G Neil3 nei-like DNA glycosylase 3 involved_in ISO
IBA		 (PMID:23755964)
GO_REF:0000033
(MGI:4440390|PMID:20185759)		 RGD
GO_Central		 PMID:20185759 PMID:23755964 GO_REF:0000033 MGI:4440390 NCBI chr16:38,359,305...38,418,528
Ensembl chr16:38,359,371...38,418,527 		JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within IDA
ISO		 MGI:2386943 (PMID:10570187), (PMID:9207108) RGD PMID:9207108 PMID:10570187 PMID:9801319 RGD:729091 NCBI chr 4:146,474,701...146,481,959
Ensembl chr 4:146,474,750...146,484,766 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:11948190) RGD PMID:11948190 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 acts_upstream_of_or_within ISO (PMID:11948190) RGD PMID:11948190 NCBI chr15:24,034,069...24,044,340
Ensembl chr15:24,034,106...24,044,338 		JBrowse link
G Polb DNA polymerase beta involved_in TAS
IBA
IEA
ISS
ISO		 GO_REF:0000033
GO_REF:0000118
GO_REF:0000024
(PMID:16600869), (PMID:21362556)		 GO_Central
TreeGrafter
UniProt
RGD		 PMID:16600869 PMID:21362556 PMID:12388548 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118, RGD:633643 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Polg DNA polymerase gamma, catalytic subunit involved_in ISS
ISO		 GO_REF:0000024
(PMID:9770471)		 UniProt
RGD		 PMID:9770471 GO_REF:0000024 NCBI chr 1:133,382,764...133,399,578
Ensembl chr 1:133,382,766...133,398,567 		JBrowse link
G Polq DNA polymerase theta involved_in ISO (PMID:19188258) RGD PMID:19188258 NCBI chr11:63,673,796...63,775,905
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Rpa1 replication protein A1 involved_in ISO (PMID:9765279) RGD PMID:9765279 NCBI chr10:60,148,869...60,199,970
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in ISO
ISS		 (PMID:9765279)
GO_REF:0000024		 RGD
UniProt		 PMID:9765279 GO_REF:0000024 NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rpa3 replication protein A3 involved_in ISO
IBA		 (PMID:9765279)
GO_REF:0000033		 RGD
GO_Central		 PMID:9765279 GO_REF:0000033 NCBI chr 4:36,304,649...36,307,755
Ensembl chr 4:36,304,651...36,307,709 		JBrowse link
G Rpa3l1 replication protein A3 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:45,908,653...45,909,063
Ensembl chr12:45,908,683...45,909,048 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:15518571) RGD PMID:15518571 NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (MGI:3663736|PMID:16439206) RGD PMID:16439206 MGI:3663736 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:25,691,474...25,717,558
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Smug1 single-strand-selective monofunctional uracil-DNA glycosylase 1 involved_in ISO
IDA		 (PMID:12161446)
PMID:12718543		 RGD PMID:12161446 PMID:12718543 RGD:634191 NCBI chr 7:134,288,565...134,302,179
Ensembl chr 7:134,287,675...134,297,226 		JBrowse link
G Tdg thymine-DNA glycosylase involved_in ISO (MGI:5287540|PMID:21817016)
(PMID:21862836), (PMID:22327402), (PMID:22573813)		 RGD PMID:21817016 PMID:21862836 PMID:22327402 PMID:22573813 MGI:5287540 NCBI chr 7:21,077,853...21,097,617
Ensembl chr 7:21,077,853...21,097,567 		JBrowse link
G Ung uracil-DNA glycosylase involved_in IDA
ISO
TAS		 (PMID:12161446) RGD PMID:12161446 PMID:12167490 PMID:11292851 PMID:15297456 RGD:634481, RGD:1599704, RGD:1599703 NCBI chr12:42,485,276...42,494,217
Ensembl chr12:42,485,276...42,494,206 		JBrowse link
G Usp47 ubiquitin specific peptidase 47 involved_in ISO (PMID:21362556) RGD PMID:21362556 NCBI chr 1:166,152,104...166,235,312
Ensembl chr 1:166,152,199...166,235,312 		JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:17611195) RGD PMID:17611195 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:60,431,673...60,475,726
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in TAS
IBA
IEA
ISO
IDA		 GO_REF:0000033
GO_REF:0000118
(PMID:34102106), (PMID:34811483)		 GO_Central
TreeGrafter
RGD		 PMID:34102106 PMID:34811483 PMID:11056294 PMID:17412650 GO_REF:0000033 GO_REF:0000118, RGD:727220, RGD:2302580 NCBI chr 1:80,140,495...80,168,705
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
base-excision repair, AP site formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:9927729) RGD PMID:9927729 NCBI chr 9:46,309,477...46,354,478
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Nthl1 nth-like DNA glycosylase 1 involved_in ISO
IBA		 (PMID:15358233), (PMID:9927729)
GO_REF:0000033		 RGD
GO_Central		 PMID:9927729 PMID:15358233 GO_REF:0000033 NCBI chr10:13,655,791...13,661,958
Ensembl chr10:13,655,785...13,661,957 		JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:146,474,701...146,481,959
Ensembl chr 4:146,474,750...146,484,766 		JBrowse link
G Tdg thymine-DNA glycosylase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:21,077,853...21,097,617
Ensembl chr 7:21,077,853...21,097,567 		JBrowse link
base-excision repair, AP site formation via deaminated base removal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ung uracil-DNA glycosylase involved_in ISO
IBA		 (PMID:18973764)
GO_REF:0000033		 RGD
GO_Central		 PMID:18973764 GO_REF:0000033 NCBI chr12:42,485,276...42,494,217
Ensembl chr12:42,485,276...42,494,206 		JBrowse link
base-excision repair, DNA ligation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lig3 DNA ligase 3 involved_in IDA
IBA
ISO		 GO_REF:0000033
(PMID:24674627)
(PMID:19589734)		 GO_Central
RGD		 PMID:19589734 PMID:24674627 PMID:17412650 GO_REF:0000033, RGD:2302580 NCBI chr10:67,717,808...67,741,141
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
base-excision repair, gap-filling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcna proliferating cell nuclear antigen acts_upstream_of_or_within ISO (PMID:15177179) RGD PMID:15177179 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Polb DNA polymerase beta acts_upstream_of_or_within IDA
ISO		 (PMID:15177179) RGD PMID:15177179 PMID:17412650 RGD:2302580 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:10559260), (PMID:10559261)
(PMID:15177179)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:10559260 PMID:10559261 PMID:15177179 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:95,025,462...95,041,559
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in ISO
IBA		 (PMID:10559260)
GO_REF:0000033		 RGD
GO_Central		 PMID:10559260 GO_REF:0000033 NCBI chr12:46,345,420...46,393,984
Ensembl chr12:46,345,420...46,393,939 		JBrowse link
G Polg DNA polymerase gamma, catalytic subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15177179)
GO_REF:0000107		 RGD
Ensembl		 PMID:15177179 GO_REF:0000107 NCBI chr 1:133,382,764...133,399,578
Ensembl chr 1:133,382,766...133,398,567 		JBrowse link
G Poll DNA polymerase lambda involved_in ISO
ISS		 (PMID:19806195)
GO_REF:0000024		 RGD
UniProt		 PMID:19806195 GO_REF:0000024 NCBI chr 1:244,400,202...244,408,762
Ensembl chr 1:244,400,204...244,408,662 		JBrowse link
broken chromosome clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cip2a cellular inhibitor of PP2A involved_in IEA
ISO		 GO_REF:0000107
(PMID:37165191), (PMID:37316668)		 Ensembl
RGD		 PMID:37165191 PMID:37316668 GO_REF:0000107 NCBI chr11:51,792,143...51,823,016
Ensembl chr11:51,795,024...51,822,938 		JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:37165191), (PMID:37316668)		 Ensembl
RGD		 PMID:37165191 PMID:37316668 GO_REF:0000107 NCBI chr 8:103,887,805...103,931,662
Ensembl chr 8:103,887,865...103,931,674 		JBrowse link
DNA alkylation repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh2 alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase involved_in ISO
IBA		 (PMID:18432238), (PMID:20714506)
GO_REF:0000033
(MGI:3796299|PMID:18519673)		 RGD
GO_Central		 PMID:18432238 PMID:18519673 PMID:20714506 GO_REF:0000033 MGI:3796299 NCBI chr12:42,494,187...42,500,929
Ensembl chr12:42,496,300...42,500,914 		JBrowse link
G Alkbh3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:20714506), (PMID:22055184)
GO_REF:0000002		 UniProt
RGD
InterPro		 PMID:20714506 PMID:22055184 GO_REF:0000002 GO_REF:0000024 NCBI chr 3:79,939,515...79,972,820
Ensembl chr 3:79,939,600...79,972,000 		JBrowse link
G Ascc1 activating signal cointegrator 1 complex subunit 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:27,941,053...28,031,272
Ensembl chr20:27,941,283...28,031,272 		JBrowse link
G Ascc3 activating signal cointegrator 1 complex subunit 3 involved_in ISO
ISS		 (PMID:22055184)
GO_REF:0000024		 RGD
UniProt		 PMID:22055184 GO_REF:0000024 NCBI chr20:53,510,137...53,795,446
Ensembl chr20:53,510,184...53,790,165 		JBrowse link
G Fto FTO, alpha-ketoglutarate dependent dioxygenase involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:18775698)
GO_REF:0000107
(MGI:3817348|PMID:18775698)		 UniProt
RGD
Ensembl		 PMID:18775698 GO_REF:0000024 GO_REF:0000107 MGI:3817348 NCBI chr19:15,284,898...15,692,142
Ensembl chr19:15,349,696...15,692,083 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase acts_upstream_of_or_within IDA
ISO		 (PMID:1554415) RGD PMID:1554415 PMID:15025514 RGD:2316914 NCBI chr 1:191,710,980...191,937,760
Ensembl chr 1:191,710,930...191,937,756 		JBrowse link
G Otud4 OTU deubiquitinase 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:25944111)		 Ensembl
RGD		 PMID:25944111 GO_REF:0000107 NCBI chr19:28,236,713...28,279,815
Ensembl chr19:28,236,713...28,279,815 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:25944111)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:25944111 GO_REF:0000024 GO_REF:0000107 NCBI chr10:6,880,684...6,925,355
Ensembl chr10:6,828,795...6,925,355 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in IEA
ISO		 GO_REF:0000107
(PMID:25944111)		 Ensembl
RGD		 PMID:25944111 GO_REF:0000107 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711 		JBrowse link
DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:30886146)
(PMID:12937170)
GO_REF:0000033		 RGD
GO_Central		 PMID:12937170 PMID:30886146 GO_REF:0000033 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Atr ATR serine/threonine kinase involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:14657349), (PMID:21705319), (PMID:21777809)
(PMID:12937170)
GO_REF:0000033		 RGD
GO_Central		 PMID:12937170 PMID:14657349 PMID:21705319 PMID:21777809 GO_REF:0000033 NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136 		JBrowse link
G Atrip ATR interacting protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:109,708,440...109,722,511
Ensembl chr 8:109,708,440...109,722,477 		JBrowse link
G Cdc5l cell division cycle 5-like involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24332808)		 UniProt
Ensembl
RGD		 PMID:24332808 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:15,564,949...15,603,453
Ensembl chr 9:15,564,767...15,603,450 		JBrowse link
G Cep63 centrosomal protein 63 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:103,162,639...103,214,177
Ensembl chr 8:103,162,700...103,214,177 		JBrowse link
G Chek1 checkpoint kinase 1 involved_in
acts_upstream_of_or_within		 ISO
IEA
ISS		 (PMID:16963448), (PMID:19716789)
MGI:1926528 (PMID:10859164), (PMID:12529385)
GO_REF:0000002
GO_REF:0000024		 RGD
InterPro
UniProt		 PMID:10859164 PMID:12529385 PMID:16963448 PMID:19716789 GO_REF:0000002 GO_REF:0000024 NCBI chr 8:36,420,565...36,443,477
Ensembl chr 8:36,420,569...36,441,009 		JBrowse link
G Chek2 checkpoint kinase 2 IMP RGD PMID:10435585 RGD:633752 NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286 		JBrowse link
G Clock clock circadian regulator involved_in ISO
IEA		 (PMID:21659603)
GO_REF:0000107		 RGD
Ensembl		 PMID:21659603 GO_REF:0000107 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400 		JBrowse link
G Clspn claspin involved_in ISO (PMID:16963448) RGD PMID:16963448 NCBI chr 5:138,850,119...138,885,037
Ensembl chr 5:138,850,128...138,885,034 		JBrowse link
G Donson DNA replication fork stabilization factor DONSON involved_in ISO (PMID:28191891) RGD PMID:28191891 NCBI chr11:30,919,834...30,933,150
Ensembl chr11:30,923,239...30,932,889 		JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:8,918,764...8,959,474
Ensembl chr 7:8,917,786...8,956,475 		JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L involved_in ISO (PMID:28525742) RGD PMID:28525742 NCBI chr11:64,814,926...64,824,539
Ensembl chr11:64,814,926...64,824,538 		JBrowse link
G E2f1 E2F transcription factor 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:12717439)		 UniProt
Ensembl
RGD		 PMID:12717439 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361 		JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:25820262) RGD PMID:25820262 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Gnb1l G protein subunit beta 1 like involved_in ISO (PMID:37541219) RGD PMID:37541219 NCBI chr11:82,425,301...82,507,836
Ensembl chr11:82,432,627...82,507,466 		JBrowse link
G H2ax H2A.X variant histone involved_in
NOT|acts_upstream_of_or_within		 ISO (PMID:17974976)
MGI:2156048 (PMID:11934988)		 RGD PMID:11934988 PMID:17974976 NCBI chr 8:44,671,907...44,673,262
Ensembl chr 8:44,671,786...44,673,239 		JBrowse link
G Hinfp histone H4 transcription factor involved_in ISO (PMID:17974976) RGD PMID:17974976 NCBI chr 8:44,634,333...44,644,288
Ensembl chr 8:44,634,333...44,641,000 		JBrowse link
G Hus1 HUS1 checkpoint clamp component involved_in
acts_upstream_of_or_within		 ISO (PMID:21659603)
MGI:1927769 (PMID:12529385)		 RGD PMID:12529385 PMID:21659603 NCBI chr14:83,688,702...83,703,466
Ensembl chr14:83,688,708...83,703,442 		JBrowse link
G Ints7 integrator complex subunit 7 involved_in ISO (PMID:21659603) RGD PMID:21659603 NCBI chr13:103,155,123...103,207,953
Ensembl chr13:103,155,090...103,208,592 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in IEA
ISO		 GO_REF:0000107
(PMID:10891478)		 Ensembl
RGD		 PMID:10891478 GO_REF:0000107 NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868 		JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO (PMID:11836244) RGD PMID:11836244 NCBI chr 3:57,130,539...57,289,943
Ensembl chr 3:57,130,551...57,289,626 		JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:12937170)		 Ensembl
RGD		 PMID:12937170 GO_REF:0000107 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589 		JBrowse link
G Nbn nibrin acts_upstream_of_or_within ISO (PMID:12529385) RGD PMID:12529385 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Parp9 poly (ADP-ribose) polymerase family, member 9 involved_in ISO (PMID:28525742) RGD PMID:28525742 NCBI chr11:64,780,977...64,814,995
Ensembl chr11:64,780,981...64,815,455 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24332808)		 UniProt
Ensembl
RGD		 PMID:24332808 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662 		JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176524 (PMID:12937170)		 Ensembl
RGD		 PMID:12937170 GO_REF:0000107 NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925 		JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease involved_in ISO
IBA		 (PMID:21659603)
GO_REF:0000033		 RGD
GO_Central		 PMID:21659603 GO_REF:0000033 NCBI chr 2:59,461,597...59,469,707
Ensembl chr 2:59,461,607...59,469,689 		JBrowse link
G Rad17 RAD17 checkpoint clamp loader component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:31,764,260...31,794,542
Ensembl chr 2:31,764,261...31,794,072 		JBrowse link
G Rad9a RAD9 checkpoint clamp component A involved_in ISO (PMID:21659603) RGD PMID:21659603 NCBI chr 1:201,488,511...201,553,582
Ensembl chr 1:201,487,136...201,553,608 		JBrowse link
G Rad9b RAD9 checkpoint clamp component B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:34,217,868...34,248,380
Ensembl chr12:34,218,024...34,248,372 		JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in IEA
IBA
ISO		 GO_REF:0000002
GO_REF:0000118
GO_REF:0000033
(PMID:21659603), (PMID:25602520)		 InterPro
TreeGrafter
GO_Central
RGD		 PMID:21659603 PMID:25602520 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:161,634,047...161,639,437
Ensembl chr 4:161,634,048...161,639,371 		JBrowse link
G Rhno1-ps2 RAD9-HUS1-RAD1 interacting nuclear orphan 1, pseudogene 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:184,691,837...184,692,934
Ensembl chr 2:184,691,839...184,692,926
Ensembl chr 2:184,691,839...184,692,926 		JBrowse link
G Stk38 serine/threonine kinase 38 involved_in ISO (PMID:32537488) RGD PMID:32537488 NCBI chr20:7,034,245...7,067,803
Ensembl chr20:7,034,242...7,068,198 		JBrowse link
G Tipin timeless interacting protein acts_upstream_of_or_within ISO (PMID:17141802) RGD PMID:17141802 NCBI chr 8:64,780,813...64,801,358
Ensembl chr 8:64,780,828...64,801,352 		JBrowse link
G Tiprl TOR signaling pathway regulator involved_in ISO
IEA		 (PMID:17384681)
GO_REF:0000107		 RGD
Ensembl		 PMID:17384681 GO_REF:0000107 NCBI chr13:77,527,176...77,552,026
Ensembl chr13:77,527,176...77,552,074 		JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in ISO (PMID:17575048), (PMID:21777809), (PMID:31135337) RGD PMID:17575048 PMID:21777809 PMID:31135337 NCBI chr 8:103,887,805...103,931,662
Ensembl chr 8:103,887,865...103,931,674 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:18045533) RGD PMID:18045533 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
G Ufl1 Ufm1-specific ligase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:30886146)		 UniProt
RGD		 PMID:30886146 GO_REF:0000024 NCBI chr 5:38,962,721...38,995,134
Ensembl chr 5:38,962,171...38,995,199 		JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
(PMID:18662541)		 UniProt
GO_Central
TreeGrafter
RGD		 PMID:18662541 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:49,325,766...49,386,229
Ensembl chr 8:49,325,867...49,386,229 		JBrowse link
DNA damage response, signal transduction by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer2 alkaline ceramidase 2 involved_in ISO (PMID:28294157), (PMID:29229990) RGD PMID:28294157 PMID:29229990 NCBI chr 5:101,391,830...101,442,615
Ensembl chr 5:101,391,885...101,442,614 		JBrowse link
G Atrx ATRX, chromatin remodeler involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5568153|PMID:24651726)		 UniProt
Ensembl
RGD		 PMID:24651726 GO_REF:0000024 GO_REF:0000107 MGI:5568153 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330 		JBrowse link
G Batf basic leucine zipper ATF-like transcription factor involved_in ISS
ISO		 GO_REF:0000024
(MGI:5448499|PMID:22385964)		 UniProt
RGD		 PMID:22385964 GO_REF:0000024 MGI:5448499 NCBI chr 6:105,353,715...105,376,051
Ensembl chr 6:105,353,715...105,376,051 		JBrowse link
G Bcl3 BCL3, transcription coactivator involved_in ISO (PMID:16384933) RGD PMID:16384933 NCBI chr 1:79,471,368...79,485,908
Ensembl chr 1:79,471,369...79,485,607 		JBrowse link
G Foxo3 forkhead box O3 acts_upstream_of_or_within ISO (PMID:15383658) RGD PMID:15383658 NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO (PMID:14647468) RGD PMID:14647468 NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223 		JBrowse link
G Mdm4 MDM4 regulator of p53 involved_in ISO
IEA		 (PMID:14660608)
GO_REF:0000107		 RGD
Ensembl		 PMID:14660608 GO_REF:0000107 NCBI chr13:44,432,596...44,516,165
Ensembl chr13:44,406,213...44,474,226 		JBrowse link
G Mif macrophage migration inhibitory factor acts_upstream_of_or_within ISO MGI:2673280 (PMID:12878730) RGD PMID:12878730 NCBI chr20:12,790,919...12,791,784
Ensembl chr20:12,790,902...12,799,504 		JBrowse link
G Muc1 mucin 1, cell surface associated involved_in ISO (PMID:15710329) RGD PMID:15710329 NCBI chr 2:174,635,989...174,640,738
Ensembl chr 2:174,635,995...174,640,733 		JBrowse link
G Myo6 myosin VI involved_in ISO (PMID:16507995) RGD PMID:16507995 NCBI chr 8:81,087,157...81,242,022
Ensembl chr 8:81,087,139...81,239,292 		JBrowse link
G Ndrg1 N-myc downstream regulated 1 involved_in ISO
IEA		 (PMID:9766676)
GO_REF:0000107		 RGD
Ensembl		 PMID:9766676 GO_REF:0000107 NCBI chr 7:98,684,487...98,725,869
Ensembl chr 7:98,684,487...98,725,880 		JBrowse link
G Ndufs6 NADH:ubiquinone oxidoreductase subunit S6 acts_upstream_of_or_within ISO (PMID:33323934) RGD PMID:33323934 NCBI chr 1:29,968,833...29,977,423
Ensembl chr 1:29,968,842...29,977,467 		JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (PMID:15456759), (PMID:17690115) RGD PMID:15456759 PMID:17690115 NCBI chr 4:7,525,132...7,576,659
Ensembl chr 4:7,525,004...7,576,548 		JBrowse link
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent, 1D acts_upstream_of_or_within ISO (PMID:21522133) RGD PMID:21522133 NCBI chr10:70,172,603...70,208,607
Ensembl chr10:70,172,603...70,208,607 		JBrowse link
G Sesn2 sestrin 2 involved_in ISO (PMID:18692468)
(MGI:3808916|PMID:18692468)		 RGD PMID:18692468 MGI:3808916 NCBI chr 5:144,702,287...144,721,241
Ensembl chr 5:144,701,530...144,721,260 		JBrowse link
G Sp100 SP100 nuclear antigen involved_in ISO (PMID:14647468) RGD PMID:14647468 NCBI chr 9:86,310,990...86,377,036
Ensembl chr 9:86,311,032...86,377,034 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 ISO (PMID:15149599), (PMID:20160708), (PMID:7958916)
MGI:106184|MGI:109337 (PMID:11790307), (PMID:11884608), (PMID:16199867), (PMID:17476307)		 RGD PMID:7958916 PMID:11790307 PMID:11884608 PMID:15149599 PMID:16199867 More... NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Triap1 TP53 regulated inhibitor of apoptosis 1 involved_in ISO (PMID:15735003) RGD PMID:15735003 NCBI chr12:41,267,534...41,270,053
Ensembl chr12:41,267,549...41,270,042 		JBrowse link
G Usp10 ubiquitin specific peptidase 10 involved_in ISO
IBA
IEA
ISS		 (PMID:20096447)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
Ensembl
UniProt		 PMID:20096447 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr19:47,972,858...48,014,900
Ensembl chr19:47,972,611...48,014,897 		JBrowse link
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp2 caspase 2 involved_in ISO (PMID:21726810) RGD PMID:21726810 NCBI chr 4:71,149,632...71,167,388
Ensembl chr 4:71,149,669...71,167,379 		JBrowse link
G Casp9 caspase 9 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 5:154,108,872...154,126,628
Ensembl chr 5:154,109,046...154,126,626 		JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A involved_in ISO (PMID:15149599) RGD PMID:15149599 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585 		JBrowse link
G Cradd CASP2 and RIPK1 domain containing adaptor with death domain involved_in ISO
IBA		 (PMID:21726810)
GO_REF:0000033		 RGD
GO_Central		 PMID:21726810 GO_REF:0000033 NCBI chr 7:29,940,240...29,952,907
Ensembl chr 7:29,798,586...29,952,907 		JBrowse link
G E2f7 E2F transcription factor 7 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:22802528)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:22802528 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:46,150,533...46,192,739
Ensembl chr 7:46,151,293...46,192,734 		JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:21726810) RGD PMID:21726810 NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915 		JBrowse link
G Muc1 mucin 1, cell surface associated involved_in ISO (PMID:15710329) RGD PMID:15710329 NCBI chr 2:174,635,989...174,640,738
Ensembl chr 2:174,635,995...174,640,733 		JBrowse link
G Pcbp4 poly(rC) binding protein 4 involved_in ISO (PMID:10891498) RGD PMID:10891498 NCBI chr 8:107,092,688...107,103,276
Ensembl chr 8:107,093,013...107,103,276 		JBrowse link
G Pidd1 p53-induced death domain protein 1 involved_in ISO (PMID:21726810) RGD PMID:21726810 NCBI chr 1:196,536,815...196,542,808
Ensembl chr 1:196,536,834...196,542,699 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (MGI:3580934|PMID:15626733) RGD PMID:15626733 MGI:3580934 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Ppp2r5c protein phosphatase 2, regulatory subunit B', gamma involved_in ISO (PMID:17245430) RGD PMID:17245430 NCBI chr 6:129,461,689...129,598,344
Ensembl chr 6:129,461,648...129,598,346 		JBrowse link
G Prap1 proline-rich acidic protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23235459)		 UniProt
RGD		 PMID:23235459 GO_REF:0000024 NCBI chr 1:194,883,078...194,886,874
Ensembl chr 1:194,883,078...194,886,872 		JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) RGD PMID:17050675 NCBI chr 3:161,801,577...161,814,381
Ensembl chr 3:161,801,577...161,814,381 		JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212)
(MGI:5882892|PMID:16213212)		 RGD PMID:16213212 MGI:5882892 NCBI chr10:53,610,836...53,613,966
Ensembl chr10:53,610,421...53,613,966 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:16213212)
MGI:108027 (PMID:16107883)
GO_REF:0000107		 RGD
Ensembl		 PMID:16107883 PMID:16213212 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1930616 (PMID:8738145)		 Ensembl
RGD		 PMID:8738145 GO_REF:0000107 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567 		JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A acts_upstream_of_or_within ISO (PMID:10710310) RGD PMID:10710310 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585 		JBrowse link
G Chek2 checkpoint kinase 2 acts_upstream_of_or_within ISO MGI:2386905 (PMID:10710310) RGD PMID:10710310 NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286 		JBrowse link
G Foxm1 forkhead box M1 involved_in ISO
IEA		 (PMID:17101782)
GO_REF:0000107
(MGI:3698692|PMID:17101782)		 RGD
Ensembl		 PMID:17101782 GO_REF:0000107 MGI:3698692 NCBI chr 4:161,639,538...161,652,012
Ensembl chr 4:161,638,816...161,650,684 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:14966270)		 UniProt
Ensembl
RGD		 PMID:14966270 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) RGD PMID:17050675 NCBI chr 3:161,801,577...161,814,381
Ensembl chr 3:161,801,577...161,814,381 		JBrowse link
G Rps27l ribosomal protein S27-like involved_in ISO (PMID:18056458) RGD PMID:18056458 NCBI chr 8:67,562,483...67,567,418
Ensembl chr 8:67,562,483...67,567,418 		JBrowse link
G Rps6ka6 ribosomal protein S6 kinase A6 involved_in ISO
IBA		 (PMID:15042092)
GO_REF:0000033		 RGD
GO_Central		 PMID:15042092 GO_REF:0000033 NCBI chr  X:76,353,316...76,454,502
Ensembl chr  X:76,353,760...76,454,484 		JBrowse link
G Tfap4 transcription factor AP-4 involved_in ISO (PMID:18818310) RGD PMID:18818310 NCBI chr10:11,001,338...11,019,386
Ensembl chr10:11,002,911...11,019,386 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:10710310)
(PMID:16213212), (PMID:16479015)		 Ensembl
RGD		 PMID:10710310 PMID:16213212 PMID:16479015 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
DNA damage response, signal transduction resulting in transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17296730)		 UniProt
RGD		 PMID:17296730 GO_REF:0000024 NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:10802669), (PMID:26240375) RGD PMID:10802669 PMID:26240375 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Blm BLM RecQ like helicase involved_in ISO (PMID:21325134) RGD PMID:21325134 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in ISS
IEA		 GO_REF:0000024
GO_REF:0000107		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Exd2 exonuclease 3'-5' domain containing 2 involved_in ISO (PMID:26807646) RGD PMID:26807646 NCBI chr 6:100,116,867...100,150,452
Ensembl chr 6:100,116,867...100,150,442 		JBrowse link
G Exo1 exonuclease 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr13:87,809,725...87,834,654
Ensembl chr13:87,809,810...87,834,654 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in IEA
ISO		 GO_REF:0000107
(PMID:23080121)		 Ensembl
RGD		 PMID:23080121 GO_REF:0000107 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nbn nibrin involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:16622404)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:16622404 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:16622404), (PMID:21757780)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:16622404 PMID:21757780 GO_REF:0000024 GO_REF:0000107 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Setmar SET domain and mariner transposase fusion gene involved_in ISO (PMID:21491884) RGD PMID:21491884 NCBI chr 4:141,046,058...141,058,183
Ensembl chr 4:141,046,069...141,058,197 		JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:25,691,474...25,717,558
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1` involved_in ISO
ISS		 (PMID:22960744)
GO_REF:0000024		 RGD
UniProt		 PMID:22960744 GO_REF:0000024 NCBI chr 4:94,311,441...94,379,184
Ensembl chr 4:94,311,489...94,372,563 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO (PMID:17349954) RGD PMID:17349954 NCBI chr 7:30,154,330...30,184,373
Ensembl chr 7:30,154,616...30,184,355 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 involved_in ISO (PMID:17349954) RGD PMID:17349954 NCBI chr11:85,304,528...85,338,430
Ensembl chr11:85,304,526...85,336,369 		JBrowse link
DNA double-strand break processing involved in repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07031480.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G ENSRNOG00000066166 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr13:62,124,375...62,124,887 JBrowse link
G ENSRNOG00000069305 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr13:18,979,537...18,979,779 JBrowse link
G Helq helicase, POLQ-like involved_in ISO (PMID:34937945) RGD PMID:34937945 NCBI chr14:8,818,582...8,862,926
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in
acts_upstream_of_or_within		 ISO (MGI:5619739|PMID:22912580)
(PMID:19506022)		 RGD PMID:19506022 PMID:22912580 MGI:5619739 NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
G Rbbp8 RB binding protein 8, endonuclease involved_in ISO
IEA
IBA		 (PMID:18716619), (PMID:19202191)
GO_REF:0000118
GO_REF:0000033		 RGD
TreeGrafter
GO_Central		 PMID:18716619 PMID:19202191 GO_REF:0000033 GO_REF:0000118 NCBI chr18:2,922,985...2,988,851
Ensembl chr18:2,921,286...2,988,846 		JBrowse link
G Rbbp8nl RBBP8 N-terminal like involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 3:167,364,048...167,378,993
Ensembl chr 3:167,364,048...167,379,092 		JBrowse link
G Rnf138 ring finger protein 138 involved_in ISO
IEA
IBA
ISS		 (PMID:26502057)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000024		 RGD
TreeGrafter
GO_Central
UniProt		 PMID:26502057 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr18:12,291,557...12,315,931
Ensembl chr18:12,291,590...12,315,930 		JBrowse link
G Rnf138l1 ring finger protein 138 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:30,739,541...30,740,614
Ensembl chr  X:30,739,413...30,740,613 		JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in ISO (PMID:19595721) RGD PMID:19595721 NCBI chr 1:181,286,190...181,291,739
Ensembl chr 1:181,283,921...181,291,775 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO (PMID:19595721) RGD PMID:19595721 NCBI chr10:11,526,623...11,549,313
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
DNA ligation involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:12517771), (PMID:17290226)
MGI:1857732 (PMID:9823897)		 RGD PMID:9823897 PMID:12517771 PMID:17290226 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Nhej1 nonhomologous end-joining factor 1 involved_in ISO
IEA		 (PMID:19056826)
GO_REF:0000107		 RGD
Ensembl		 PMID:19056826 GO_REF:0000107 NCBI chr 9:76,526,322...76,622,488
Ensembl chr 9:76,526,324...76,622,444 		JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase involved_in ISO (PMID:15385968) RGD PMID:15385968 NCBI chr 1:95,341,465...95,346,921
Ensembl chr 1:95,341,620...95,346,920 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in ISO
IBA		 (PMID:12517771), (PMID:15385968), (PMID:17290226), (PMID:28453785)
GO_REF:0000033		 RGD
GO_Central		 PMID:12517771 PMID:15385968 PMID:17290226 PMID:28453785 GO_REF:0000033 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmc1 DNA meiotic recombinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO
IBA		 (PMID:26681308)
GO_REF:0000033		 RGD
GO_Central		 PMID:26681308 GO_REF:0000033 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07025074.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr16:25,584,241...25,585,849 JBrowse link
G AABR07035218.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:8,796,281...8,810,625
Ensembl chr14:8,796,266...8,810,622 		JBrowse link
G AC108595.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 7:122,951,378...122,953,062 JBrowse link
G Adprs ADP-ribosylserine hydrolase involved_in ISO (PMID:30045870) RGD PMID:30045870 NCBI chr 5:138,614,022...138,619,296
Ensembl chr 5:138,614,022...138,619,296 		JBrowse link
G Alkbh1 alkB homolog 1, histone H2A dioxygenase involved_in ISO (PMID:19959401) RGD PMID:19959401 NCBI chr 6:107,068,301...107,088,784
Ensembl chr 6:107,068,475...107,088,759 		JBrowse link
G Alkbh3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 3:79,939,515...79,972,820
Ensembl chr 3:79,939,600...79,972,000 		JBrowse link
G Ankle1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (MGI:5800654|PMID:27010503) RGD PMID:27010503 MGI:5800654 NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729 		JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000043
(PMID:1627644), (PMID:9560228)		 UniProt
RGD		 PMID:1627644 PMID:9560228 GO_REF:0000024 GO_REF:0000043 NCBI chr15:24,144,595...24,146,785
Ensembl chr15:24,144,362...24,146,785 		JBrowse link
G Apex2l1 APEX nuclease (apurinic/apyrimidinic endonuclease) 2-like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:67,166,252...67,168,138
Ensembl chr14:67,166,530...67,168,080 		JBrowse link
G Aplf aprataxin and PNKP like factor involved_in ISO (PMID:21211722), (PMID:30104678) RGD PMID:21211722 PMID:30104678 NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633 		JBrowse link
G Aptx aprataxin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:55,798,896...55,822,963
Ensembl chr 5:55,800,248...55,822,855 		JBrowse link
G Asf1a anti-silencing function 1A histone chaperone acts_upstream_of_or_within ISO (PMID:11897662) RGD PMID:11897662 NCBI chr20:32,893,962...32,908,808
Ensembl chr20:32,893,573...32,908,808 		JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO MGI:1857132|MGI:2155399 (PMID:11679583), (PMID:15364958), (PMID:15542845) RGD PMID:11679583 PMID:15364958 PMID:15542845 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Atr ATR serine/threonine kinase acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:15364958)
GO_REF:0000033		 RGD
GO_Central		 PMID:15364958 GO_REF:0000033 NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136 		JBrowse link
G Atrip ATR interacting protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:109,708,440...109,722,511
Ensembl chr 8:109,708,440...109,722,477 		JBrowse link
G Atrx ATRX, chromatin remodeler involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330 		JBrowse link
G Bach1 BTB domain and CNC homolog 1 involved_in ISO (PMID:11301010) RGD PMID:11301010 NCBI chr11:26,939,429...26,974,876
Ensembl chr11:26,939,480...26,972,447 		JBrowse link
G Bard1 BRCA1 associated RING domain 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:72,616,070...72,694,553
Ensembl chr 9:72,623,155...72,694,265 		JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:15364958) RGD PMID:15364958 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Cdc5l cell division cycle 5-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:15,564,949...15,603,453
Ensembl chr 9:15,564,767...15,603,450 		JBrowse link
G Cdk2 cyclin dependent kinase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:1,129,878...1,137,431
Ensembl chr 7:1,129,811...1,137,403 		JBrowse link
G Cdk7 cyclin-dependent kinase 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:31,840,558...31,865,422
Ensembl chr 2:31,840,558...31,865,383 		JBrowse link
G Cdk9 cyclin-dependent kinase 9 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:15,996,467...16,001,315
Ensembl chr 3:15,996,468...16,002,410 		JBrowse link
G Cenps centromere protein S involved_in ISO (PMID:20347429) RGD PMID:20347429 NCBI chr 5:159,563,917...159,573,534 JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:873,953...900,701
Ensembl chr 9:874,051...900,654 		JBrowse link
G Chd1l chromodomain helicase DNA binding protein 1-like involved_in IEA
ISO		 GO_REF:0000002
(PMID:34486521)		 InterPro
RGD		 PMID:34486521 GO_REF:0000002 NCBI chr 2:185,138,526...185,217,498
Ensembl chr 2:185,139,308...185,217,595 		JBrowse link
G Chek1 checkpoint kinase 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:19716789)
(PMID:15364958)		 RGD PMID:15364958 PMID:19716789 NCBI chr 8:36,420,565...36,443,477
Ensembl chr 8:36,420,569...36,441,009 		JBrowse link
G Chrna4 cholinergic receptor nicotinic alpha 4 subunit involved_in IEA
ISO		 GO_REF:0000107
(PMID:16332175)		 Ensembl
RGD		 PMID:16332175 GO_REF:0000107 NCBI chr 3:168,136,246...168,157,839
Ensembl chr 3:168,136,266...168,156,957 		JBrowse link
G Dclre1b DNA cross-link repair 1B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:191,309,909...191,318,399
Ensembl chr 2:191,309,913...191,318,423 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in TAS
IBA
IEA		 GO_REF:0000033
GO_REF:0000043		 GO_Central
UniProt
RGD		 PMID:12145536 GO_REF:0000033 GO_REF:0000043, RGD:632554 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676 		JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:77,185,114...77,207,650
Ensembl chr 3:77,185,109...77,207,631 		JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:131,143,726...131,151,760
Ensembl chr 5:131,143,729...131,151,742 		JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:8,918,764...8,959,474
Ensembl chr 7:8,917,786...8,956,475 		JBrowse link
G Eepd1 endonuclease/exonuclease/phosphatase family domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:23,957,258...24,064,343
Ensembl chr 8:23,957,255...24,064,340 		JBrowse link
G Eid3 EP300 interacting inhibitor of differentiation 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:20,860,073...20,861,395 JBrowse link
G Endov endonuclease V involved_in ISO (MGI:5009179|PMID:12853604) RGD PMID:12853604 MGI:5009179 NCBI chr10:104,760,059...104,777,732
Ensembl chr10:104,760,137...104,775,969 		JBrowse link
G ENSRNOG00000063632 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr10:100,935,824...100,936,291 JBrowse link
G ENSRNOG00000066166 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr13:62,124,375...62,124,887 JBrowse link
G ENSRNOG00000069014 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 1:17,520,592...17,522,080 JBrowse link
G ENSRNOG00000069305 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr13:18,979,537...18,979,779 JBrowse link
G Ep400 E1A binding protein p400 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:45,891,886...46,002,523
Ensembl chr12:45,891,916...45,998,861 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO (PMID:25538220)
MGI:2158940 (PMID:12466203)		 RGD PMID:12466203 PMID:25538220 NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO MGI:2183949 (PMID:11950998) RGD PMID:11950998 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO (PMID:2167179) RGD PMID:2167179 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in
acts_upstream_of_or_within		 ISO UniProtKB:Q15554 (PMID:17055345), (PMID:19596235)
MGI:3028660 (PMID:14729965)		 RGD PMID:14729965 PMID:17055345 PMID:19596235 NCBI chr10:2,416,259...2,448,364
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Ercc4l1 excision repair cross-complementing rodent repair deficiency, complementation group 4-like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:954,927...983,651
Ensembl chr10:954,977...983,174 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease acts_upstream_of_or_within ISO MGI:3043589 (PMID:15082767) RGD PMID:15082767 NCBI chr 9:46,309,477...46,354,478
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in
acts_upstream_of_or_within		 ISO (PMID:26218421)
MGI:1097693|MGI:1932102 (PMID:10806208), (PMID:12447686), (PMID:17213818)		 RGD PMID:10806208 PMID:12447686 PMID:17213818 PMID:26218421 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Exosc10 exosome component 10 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:158,995,313...159,018,940
Ensembl chr 5:158,995,313...159,018,940 		JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 involved_in ISO (PMID:20603073) RGD PMID:20603073 NCBI chr 1:117,915,323...117,945,044
Ensembl chr 1:117,917,099...117,944,977 		JBrowse link
G Fancd2 FA complementation group D2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:146,679,014...146,743,422
Ensembl chr 4:146,679,179...146,743,412 		JBrowse link
G Fanci FA complementation group I involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:133,327,264...133,383,661
Ensembl chr 1:133,327,297...133,383,640 		JBrowse link
G Fancl FA complementation group L involved_in ISO
IBA		 (PMID:16916645)
GO_REF:0000033		 RGD
GO_Central		 PMID:16916645 GO_REF:0000033 NCBI chr14:100,249,733...100,317,958
Ensembl chr14:100,248,875...100,314,255 		JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in ISO (PMID:23319600) RGD PMID:23319600 NCBI chr17:66,749,506...66,787,590
Ensembl chr17:66,749,534...66,787,590 		JBrowse link
G Fbxo6 F-box protein 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:158,576,729...158,582,520
Ensembl chr 5:158,576,759...158,582,525 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:170,149,706...170,311,536
Ensembl chr 2:170,149,694...170,309,941 		JBrowse link
G Fen1 flap structure-specific endonuclease 1 acts_upstream_of_or_within ISO MGI:2670036 (PMID:12861020) RGD PMID:12861020 NCBI chr 1:206,845,126...206,849,821
Ensembl chr 1:206,844,884...206,850,003 		JBrowse link
G Fh fumarate hydratase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:87,524,331...87,550,215
Ensembl chr13:87,524,337...87,550,266 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5602914|PMID:24813610)
(PMID:24813610)		 UniProt
RGD		 PMID:24813610 GO_REF:0000024 MGI:5602914 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050 		JBrowse link
G Foxm1 forkhead box M1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:161,639,538...161,652,012
Ensembl chr 4:161,638,816...161,650,684 		JBrowse link
G Gtf2h1 general transcription factor IIH subunit 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:97,321,417...97,349,455
Ensembl chr 1:97,321,394...97,349,455 		JBrowse link
G H2ax H2A.X variant histone acts_upstream_of_or_within ISO MGI:2156048 (PMID:11934988), (PMID:15364958) RGD PMID:11934988 PMID:15364958 NCBI chr 8:44,671,907...44,673,262
Ensembl chr 8:44,671,786...44,673,239 		JBrowse link
G Hdac10 histone deacetylase 10 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:120,199,126...120,205,850
Ensembl chr 7:120,199,129...120,204,228 		JBrowse link
G Hdac9 histone deacetylase 9 acts_upstream_of_or_within ISO MGI:1890508 (PMID:21746928) RGD PMID:21746928 NCBI chr 6:50,762,074...51,624,311
Ensembl chr 6:50,763,590...51,625,333 		JBrowse link
G Hdgfl2 HDGF like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:909,581...929,195
Ensembl chr 9:909,614...929,186 		JBrowse link
G Hinfp histone H4 transcription factor involved_in ISO (PMID:17974976) RGD PMID:17974976 NCBI chr 8:44,634,333...44,644,288
Ensembl chr 8:44,634,333...44,641,000 		JBrowse link
G Hltf helicase-like transcription factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:102,549,724...102,609,492
Ensembl chr 2:102,549,724...102,609,327 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Hmgb1-ps34 high mobility group box 1, pseudogene 34 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:71,363,531...71,364,791
Ensembl chr  X:71,363,531...71,364,790 		JBrowse link
G Hmgb1-ps8 high-mobility group box 1, pseudogene 8 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:34,028,487...34,030,715
Ensembl chr16:34,028,446...34,030,648 		JBrowse link
G Hmgb1l1 high mobility group box 1 like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:79,815,176...79,816,529
Ensembl chr 1:79,815,269...79,816,511 		JBrowse link
G Hmgb1l2 high mobility group box 1 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:107,671,273...107,672,015
Ensembl chr  X:107,671,272...107,672,535 		JBrowse link
G Hmgb1l5 high mobility group box 1 like 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:39,768,658...39,769,408
Ensembl chr10:39,768,658...39,769,293 		JBrowse link
G Hpf1 histone PARylation factor 1 involved_in ISO (PMID:32028527), (PMID:34108479) RGD PMID:32028527 PMID:34108479 NCBI chr16:29,203,749...29,219,651
Ensembl chr16:29,183,256...29,219,716 		JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A acts_upstream_of_or_within ISO MGI:3028843 (PMID:14701760) RGD PMID:14701760 NCBI chr20:3,870,765...3,873,221
Ensembl chr20:3,856,006...3,873,227 		JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:20,873,795...21,001,378
Ensembl chr  X:20,873,795...21,001,262 		JBrowse link
G Inip INTS3 and NABP interacting protein involved_in ISO
IBA		 (PMID:19605351)
GO_REF:0000033		 RGD
GO_Central		 PMID:19605351 GO_REF:0000033 NCBI chr 5:74,648,392...74,662,628
Ensembl chr 5:74,648,392...74,662,628 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ino80c INO80 complex subunit C involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:15,378,764...15,398,574
Ensembl chr18:15,378,770...15,393,403 		JBrowse link
G Ino80e INO80 complex subunit E involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:181,461,406...181,472,059
Ensembl chr 1:181,461,408...181,472,469 		JBrowse link
G Ints3 integrator complex subunit 3 involved_in ISO (PMID:19605351), (PMID:19683501) RGD PMID:19605351 PMID:19683501 NCBI chr 2:175,859,421...175,911,683
Ensembl chr 2:175,859,440...175,911,709 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:80,221,519...80,255,590
Ensembl chr10:80,221,524...80,255,567 		JBrowse link
G Kif22 kinesin family member 22 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:181,635,347...181,650,351
Ensembl chr 1:181,635,183...181,650,401 		JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in ISO
ISS		 (PMID:28114273)
GO_REF:0000024		 RGD
UniProt		 PMID:28114273 GO_REF:0000024 NCBI chr 1:201,000,444...201,049,819
Ensembl chr 1:201,000,444...201,049,819 		JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in ISO
ISS		 (PMID:28114273)
GO_REF:0000024		 RGD
UniProt		 PMID:28114273 GO_REF:0000024 NCBI chr 1:69,099,531...69,107,145
Ensembl chr 1:69,099,539...69,107,145 		JBrowse link
G Lig1 DNA ligase 1 NOT|acts_upstream_of_or_within
involved_in		 IDA
ISO
IEA		 MGI:2179196 (PMID:11896201)
(PMID:21390131)
GO_REF:0000117		 RGD
UniProt		 PMID:11896201 PMID:21390131 PMID:1730240 GO_REF:0000117, RGD:724410 NCBI chr 1:74,165,688...74,204,400
Ensembl chr 1:74,165,842...74,204,413 		JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO MGI:1857732 (PMID:11779495), (PMID:21390131) RGD PMID:11779495 PMID:21390131 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G LOC100363428 PCNA-associated factor-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:84,610,314...84,612,236 JBrowse link
G LOC108350839 high mobility group protein B1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:91,306,902...91,309,095
Ensembl chr10:100,935,824...100,936,291 		JBrowse link
G LOC134483981 high mobility group protein B1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G Macroh2a1 macroH2A.1 histone involved_in ISO (PMID:21211722) RGD PMID:21211722 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072 		JBrowse link
G Mbd4 methyl-CpG binding domain 4 DNA glycosylase involved_in IEA GO_REF:0000043
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 4:148,893,049...148,904,833
Ensembl chr 4:148,894,280...148,904,982 		JBrowse link
G Mdc1 mediator of DNA damage checkpoint 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:2,893,693...2,912,394
Ensembl chr20:2,895,505...2,910,240 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000043
(PMID:13679151)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:13679151 GO_REF:0000033 GO_REF:0000043 NCBI chr 1:191,710,980...191,937,760
Ensembl chr 1:191,710,930...191,937,756 		JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO MGI:1858054|MGI:1930998 (PMID:13679151), (PMID:15480418) RGD PMID:13679151 PMID:15480418 NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Mms19 MMS19 homolog, cytosolic iron-sulfur assembly component involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:240,757,279...240,794,291
Ensembl chr 1:240,757,282...240,794,288 		JBrowse link
G Mnat1 MNAT1 component of CDK activating kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:91,814,703...91,971,945
Ensembl chr 6:91,814,749...91,970,744 		JBrowse link
G Morf4l2 mortality factor 4 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:100,082,562...100,093,658
Ensembl chr  X:100,082,404...100,093,728 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:8942985)
(PMID:12687013)		 RGD PMID:8942985 PMID:12687013 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh3 mutS homolog 3 involved_in ISO (PMID:8942985) RGD PMID:8942985 NCBI chr 2:23,444,326...23,585,777 JBrowse link
G Msh6 mutS homolog 6 involved_in ISO (PMID:8942985) RGD PMID:8942985 NCBI chr 6:6,562,631...6,579,995
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in ISO (PMID:19596235) RGD PMID:19596235 NCBI chr 1:202,790,295...202,796,008
Ensembl chr 1:202,790,466...202,795,843 		JBrowse link
G Nabp1 nucleic acid binding protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19683501)		 UniProt
RGD		 PMID:19683501 GO_REF:0000024 NCBI chr 9:50,098,552...50,133,982
Ensembl chr 9:50,126,726...50,134,107 		JBrowse link
G Nabp2 nucleic acid binding protein 2 involved_in ISO
ISS		 (PMID:18449195), (PMID:19683501)
GO_REF:0000024
(MGI:5629774|PMID:25589350)		 RGD
UniProt		 PMID:18449195 PMID:19683501 PMID:25589350 GO_REF:0000024 MGI:5629774 NCBI chr 7:830,949...836,551
Ensembl chr 7:830,949...838,027 		JBrowse link
G Neil1 nei-like DNA glycosylase 1 acts_upstream_of_or_within ISO (PMID:12200441) RGD PMID:12200441 NCBI chr 8:57,550,142...57,556,884
Ensembl chr 8:57,550,147...57,556,258 		JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 involved_in ISO (PMID:26945015) RGD PMID:26945015 NCBI chr10:13,917,309...13,918,415
Ensembl chr10:13,917,403...13,918,359 		JBrowse link
G Nono non-POU domain containing, octamer-binding involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:66,554,131...66,571,992
Ensembl chr  X:66,554,098...66,571,952 		JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:21741933) RGD PMID:21741933 NCBI chr 1:76,629,084...76,636,902
Ensembl chr 1:76,629,069...76,636,902 		JBrowse link
G Npm1 nucleophosmin 1 involved_in ISO
ISS		 (PMID:19188445)
GO_REF:0000024		 RGD
UniProt		 PMID:19188445 GO_REF:0000024 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645 		JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:180,030,355...180,058,541
Ensembl chr 1:180,030,160...180,058,417 		JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component involved_in ISO (PMID:27427983) RGD PMID:27427983 NCBI chr 1:118,401,302...118,402,629 JBrowse link
G Nsmce4a NSE4 homolog A, SMC5-SMC6 complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:185,102,075...185,109,166
Ensembl chr 1:185,094,360...185,109,166 		JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within ISO MGI:1100494|MGI:2386212|MGI:2386943 (PMID:11532868), (PMID:12447686), (PMID:12874039), (PMID:17213818) RGD PMID:11532868 PMID:12447686 PMID:12874039 PMID:17213818 NCBI chr 4:146,474,701...146,481,959
Ensembl chr 4:146,474,750...146,484,766 		JBrowse link
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:204,387,215...204,395,495
Ensembl chr 1:204,387,215...204,395,483 		JBrowse link
G Pagr1 Paxip1-associated glutamate-rich protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:181,622,698...181,625,024 JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO
IEA
ISS		 (PMID:28596309)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:28596309 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISO (PMID:30104678), (PMID:30675909), (PMID:31796734), (PMID:32028527), (PMID:33186521), (PMID:34874266)
(PMID:22736760)		 RGD PMID:22736760 PMID:30104678 PMID:30675909 PMID:31796734 PMID:32028527 More... NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 involved_in ISO (PMID:30104678), (PMID:34108479) RGD PMID:30104678 PMID:34108479 NCBI chr15:24,034,069...24,044,340
Ensembl chr15:24,034,106...24,044,338 		JBrowse link
G Parpbp PARP1 binding protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:22,511,427...22,580,834
Ensembl chr 7:22,511,427...22,573,695 		JBrowse link
G Pclaf PCNA clamp associated factor involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:66,420,606...66,432,994
Ensembl chr 8:66,420,587...66,432,994
Ensembl chr 8:66,420,587...66,432,994 		JBrowse link
G Pds5a PDS5 cohesin associated factor A involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr14:42,551,653...42,651,074
Ensembl chr14:42,552,647...42,648,669 		JBrowse link
G Pds5b PDS5 cohesin associated factor B involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr12:202,481...345,596
Ensembl chr12:255,313...345,596 		JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 8:66,110,641...66,120,202
Ensembl chr 8:66,111,072...66,120,200 		JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component acts_upstream_of_or_within ISO MGI:1857947 (PMID:15480418) RGD PMID:15480418 NCBI chr12:10,676,818...10,701,161
Ensembl chr12:10,676,764...10,701,066 		JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase involved_in ISO
IBA		 UniProtKB:J7Q8E6|UniProtKB:J7QRV0 (PMID:10446192)
GO_REF:0000033		 RGD
GO_Central		 PMID:10446192 GO_REF:0000033 NCBI chr 1:95,341,465...95,346,921
Ensembl chr 1:95,341,620...95,346,920 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit involved_in
NOT|involved_in		 ISO
ISS		 (PMID:11470886)
GO_REF:0000024
(PMID:3335506)		 RGD
UniProt		 PMID:3335506 PMID:11470886 GO_REF:0000024 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Polb DNA polymerase beta involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Polk DNA polymerase kappa involved_in
acts_upstream_of_or_within		 ISO (PMID:28297716)
MGI:2445458 (PMID:12555660)		 RGD PMID:12555660 PMID:28297716 NCBI chr 2:27,822,228...27,882,331
Ensembl chr 2:27,822,679...27,882,313 		JBrowse link
G Poll DNA polymerase lambda involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:244,400,202...244,408,762
Ensembl chr 1:244,400,204...244,408,662 		JBrowse link
G Polq DNA polymerase theta acts_upstream_of_or_within ISO MGI:107202|MGI:2656007 (PMID:12663541), (PMID:15542845) RGD PMID:12663541 PMID:15542845 NCBI chr11:63,673,796...63,775,905
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662 		JBrowse link
G Psme4 proteasome activator subunit 4 involved_in ISO (MGI:5494329|PMID:23706739) RGD PMID:23706739 MGI:5494329 NCBI chr14:104,505,716...104,609,410
Ensembl chr14:104,505,716...104,609,408 		JBrowse link
G Pttg1 PTTG1 regulator of sister chromatid separation, securin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:27,893,466...27,904,965
Ensembl chr10:27,893,689...27,904,837 		JBrowse link
G Pwwp3a PWWP domain containing 3A, DNA repair factor involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
(PMID:20347427)		 UniProt
GO_Central
TreeGrafter
Ensembl
RGD		 PMID:20347427 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:9,465,180...9,482,053
Ensembl chr 7:9,465,195...9,481,966 		JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:59,461,597...59,469,707
Ensembl chr 2:59,461,607...59,469,689 		JBrowse link
G Rad17 RAD17 checkpoint clamp loader component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:31,764,260...31,794,542
Ensembl chr 2:31,764,261...31,794,072 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:9705271)		 UniProt
RGD		 PMID:9705271 GO_REF:0000024 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad51c RAD51 paralog C involved_in ISO (PMID:19451272) RGD PMID:19451272 NCBI chr10:72,205,032...72,231,643
Ensembl chr10:72,205,032...72,231,248 		JBrowse link
G Rad9a RAD9 checkpoint clamp component A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:201,488,511...201,553,582
Ensembl chr 1:201,487,136...201,553,608 		JBrowse link
G Rad9b RAD9 checkpoint clamp component B involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr12:34,217,868...34,248,380
Ensembl chr12:34,218,024...34,248,372 		JBrowse link
G Rbbp8 RB binding protein 8, endonuclease involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:2,922,985...2,988,851
Ensembl chr18:2,921,286...2,988,846 		JBrowse link
G Rdm1 RAD52 motif containing 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr10:86,562,871...86,573,034
Ensembl chr10:86,539,553...86,573,034 		JBrowse link
G Recql5 RecQ like helicase 5 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22973052)		 UniProt
RGD		 PMID:22973052 GO_REF:0000024 NCBI chr10:101,126,544...101,165,739
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
G Rev1 REV1, DNA directed polymerase involved_in ISO (PMID:21926160) RGD PMID:21926160 NCBI chr 9:40,278,100...40,351,764
Ensembl chr 9:40,278,101...40,351,576 		JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit acts_upstream_of_or_within ISO MGI:2183197 (PMID:11884603) RGD PMID:11884603 NCBI chr20:43,131,841...43,290,102
Ensembl chr20:43,132,363...43,290,099 		JBrowse link
G Rexo4 REX4 homolog, 3'-5' exonuclease involved_in ISO (PMID:21602889) RGD PMID:21602889 NCBI chr 3:10,280,654...10,291,003
Ensembl chr 3:10,280,654...10,290,996 		JBrowse link
G Rfc1 replication factor C subunit 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:42,966,279...43,041,372
Ensembl chr14:42,966,324...43,041,370 		JBrowse link
G Rfc2 replication factor C subunit 2 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:22,120,449...22,133,576
Ensembl chr12:22,120,010...22,133,557 		JBrowse link
G Rfc3 replication factor C subunit 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:1,000,987...1,011,778
Ensembl chr12:1,000,994...1,011,778 		JBrowse link
G Rfc4 replication factor C subunit 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:77,749,642...77,764,123
Ensembl chr11:77,749,638...77,764,122 		JBrowse link
G Rfc5 replication factor C subunit 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:39,207,484...39,217,041
Ensembl chr12:39,207,484...39,217,312 		JBrowse link
G Rmi2 RecQ mediated genome instability 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:4,829,333...4,837,264
Ensembl chr10:4,830,553...4,837,235 		JBrowse link
G Rnf138 ring finger protein 138 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:12,291,557...12,315,931
Ensembl chr18:12,291,590...12,315,930 		JBrowse link
G Rpa1 replication protein A1 involved_in ISO (PMID:18469000), (PMID:20545304) RGD PMID:18469000 PMID:20545304 NCBI chr10:60,148,869...60,199,970
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rpa3 replication protein A3 involved_in ISO (PMID:20545304) RGD PMID:20545304 NCBI chr 4:36,304,649...36,307,755
Ensembl chr 4:36,304,651...36,307,709 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO
IEA		 (PMID:19059439)
GO_REF:0000043		 RGD
UniProt		 PMID:19059439 GO_REF:0000043 NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
G Rps3l1 ribosomal protein S3 like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:51,559,683...51,560,522
Ensembl chr 3:51,559,683...51,560,524 		JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 involved_in ISO (PMID:11719458) RGD PMID:11719458 NCBI chr 1:156,823,960...156,848,262
Ensembl chr 1:156,823,960...156,848,261 		JBrowse link
G Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B involved_in
acts_upstream_of_or_within		 ISO (PMID:11719458)
MGI:2672883 (PMID:12858174)		 RGD PMID:11719458 PMID:12858174 NCBI chr 7:69,077,024...69,108,742
Ensembl chr 7:69,078,291...69,108,633 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl1-ps1 RuvB-like AAA ATPase 1, pseudogene 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:1,640,138...1,641,886
Ensembl chr  X:1,640,300...1,641,811 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Sirt7 sirtuin 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:105,896,476...105,903,301
Ensembl chr10:105,896,476...105,903,172 		JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:25,691,474...25,717,558
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in ISO
IEA		 (PMID:19595721), (PMID:19595722), (PMID:19596235), (PMID:19596236)
GO_REF:0000104
GO_REF:0000043		 RGD
UniProt		 PMID:19595721 PMID:19595722 PMID:19596235 PMID:19596236 GO_REF:0000043 GO_REF:0000104 NCBI chr 1:181,286,190...181,291,739
Ensembl chr 1:181,283,921...181,291,775 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO (PMID:19595722) RGD PMID:19595722 NCBI chr10:11,526,623...11,549,313
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (PMID:23911928) RGD PMID:23911928 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594 		JBrowse link
G Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1` involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:94,311,441...94,379,184
Ensembl chr 4:94,311,489...94,372,563 		JBrowse link
G Smarcal1 Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:74,239,718...74,286,156
Ensembl chr 9:74,240,241...74,286,146 		JBrowse link
G Smc1a structural maintenance of chromosomes 1A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:21,103,323...21,148,053
Ensembl chr  X:21,103,282...21,148,056 		JBrowse link
G Smc3 structural maintenance of chromosomes 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:252,601,422...252,644,522
Ensembl chr 1:252,601,753...252,644,522 		JBrowse link
G Smug1 single-strand-selective monofunctional uracil-DNA glycosylase 1 IDA RGD PMID:12718542 RGD:2317001 NCBI chr 7:134,288,565...134,302,179
Ensembl chr 7:134,287,675...134,297,226 		JBrowse link
G Sprtn SprT-like N-terminal domain involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:52,857,612...52,864,864
Ensembl chr19:52,857,866...52,864,864 		JBrowse link
G Ssrp1 structure specific recognition protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:70,124,371...70,134,481
Ensembl chr 3:70,118,655...70,134,482 		JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:14,850,765...14,853,046
Ensembl chr10:14,850,765...14,853,046 		JBrowse link
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr15:24,867,697...24,904,818
Ensembl chr15:24,866,489...24,904,846 		JBrowse link
G Swi5 SWI5 homologous recombination repair protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:15,574,687...15,583,760
Ensembl chr 3:15,564,715...15,583,805 		JBrowse link
G Taok1 TAO kinase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:62,373,072...62,465,295
Ensembl chr10:62,381,404...62,465,766 		JBrowse link
G Taok3 TAO kinase 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:39,312,354...39,473,656
Ensembl chr12:39,314,027...39,461,244 		JBrowse link
G Tdp1 tyrosyl-DNA phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:17948061)
(PMID:21390131)
GO_REF:0000033
GO_REF:0000043		 RGD
GO_Central
UniProt		 PMID:17948061 PMID:21390131 GO_REF:0000033 GO_REF:0000043 NCBI chr 6:119,163,192...119,231,029
Ensembl chr 6:119,163,166...119,231,021 		JBrowse link
G Tfpt TCF3 fusion partner involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:65,587,633...65,597,407
Ensembl chr 1:65,582,359...65,611,689 		JBrowse link
G Timeless timeless circadian regulator involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738 		JBrowse link
G Top3a DNA topoisomerase III alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:45,419,219...45,457,356
Ensembl chr10:45,419,217...45,457,559 		JBrowse link
G Top3b DNA topoisomerase III beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:84,097,018...84,125,474
Ensembl chr11:84,097,026...84,125,392 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 acts_upstream_of_or_within ISO (PMID:15364958) RGD PMID:15364958 NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Trim28 tripartite motif-containing 28 involved_in ISO (PMID:17178852) RGD PMID:17178852 NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380 		JBrowse link
G Trip12 thyroid hormone receptor interactor 12 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:85,916,691...86,043,312
Ensembl chr 9:85,916,691...86,051,403 		JBrowse link
G Trrap transformation/transcription domain-associated protein involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr12:9,738,006...9,827,708
Ensembl chr12:9,738,006...9,827,674 		JBrowse link
G Ttc5 tetratricopeptide repeat domain 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:23,993,046...24,010,710
Ensembl chr15:23,993,048...24,010,668 		JBrowse link
G Ttf2 transcription termination factor 2 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:188,366,321...188,397,750
Ensembl chr 2:188,366,331...188,397,689 		JBrowse link
G Ube2a ubiquitin-conjugating enzyme E2A involved_in ISO
IBA		 UniProtKB:P06104 (PMID:1717990)
GO_REF:0000033		 RGD
GO_Central		 PMID:1717990 GO_REF:0000033 NCBI chr  X:116,114,339...116,125,076
Ensembl chr  X:116,113,875...116,125,070 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B involved_in ISO
IBA
IEA		 UniProtKB:P06104 (PMID:1717990)
GO_REF:0000033
GO_REF:0000118		 RGD
GO_Central
TreeGrafter		 PMID:1717990 GO_REF:0000033 GO_REF:0000118 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
G Ube2d3 ubiquitin-conjugating enzyme E2D 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:223,868,397...223,899,606
Ensembl chr 2:223,868,730...223,898,081 		JBrowse link
G Ube2t ubiquitin-conjugating enzyme E2T involved_in ISO (PMID:16916645) RGD PMID:16916645 NCBI chr13:46,403,352...46,413,854
Ensembl chr13:46,403,375...46,414,835 		JBrowse link
G Ube2u ubiquitin conjugating enzyme E2 U involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 5:115,118,234...115,187,296
Ensembl chr 5:115,118,495...115,186,874 		JBrowse link
G Ube2w ubiquitin-conjugating enzyme E2W involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:2,690,742...2,754,491
Ensembl chr 5:2,690,763...2,814,965 		JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:69,115,216...69,224,843
Ensembl chr 7:69,116,761...69,224,903 		JBrowse link
G Ufl1 Ufm1-specific ligase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:38,962,721...38,995,134
Ensembl chr 5:38,962,171...38,995,199 		JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:1,133,117...1,154,639
Ensembl chr 9:1,134,909...1,154,631 		JBrowse link
G Ung uracil-DNA glycosylase TAS RGD PMID:12167490 RGD:634481 NCBI chr12:42,485,276...42,494,217
Ensembl chr12:42,485,276...42,494,206 		JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:16488880) RGD PMID:16488880 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568 		JBrowse link
G Usp1 ubiquitin specific peptidase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:113,587,564...113,598,934
Ensembl chr 5:113,587,564...113,598,932 		JBrowse link
G Usp10 ubiquitin specific peptidase 10 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:47,972,858...48,014,900
Ensembl chr19:47,972,611...48,014,897 		JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:49,325,766...49,386,229
Ensembl chr 8:49,325,867...49,386,229 		JBrowse link
G Usp3 ubiquitin specific peptidase 3 involved_in ISO (PMID:17980597) RGD PMID:17980597 NCBI chr 8:67,078,249...67,154,109
Ensembl chr 8:67,079,927...67,154,111 		JBrowse link
G Usp45 ubiquitin specific peptidase 45 acts_upstream_of_or_within ISO (PMID:25538220) RGD PMID:25538220 NCBI chr 5:35,318,621...35,392,090
Ensembl chr 5:35,318,635...35,389,420 		JBrowse link
G Uvrag UV radiation resistance associated involved_in ISO (PMID:22542840)
(MGI:5644018|PMID:22542840)		 RGD PMID:22542840 MGI:5644018 NCBI chr 1:153,185,356...153,442,200
Ensembl chr 1:153,185,395...153,442,136 		JBrowse link
G Vcp valosin-containing protein involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Wdhd1 WD repeat and HMG-box DNA binding protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:20,478,310...20,523,106
Ensembl chr15:20,489,291...20,523,096 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:54,282,092...54,299,908
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 ISO (PMID:1601884)
MGI:1857939 (PMID:11950998), (PMID:9661901)		 RGD PMID:1601884 PMID:9661901 PMID:11950998 NCBI chr 5:60,431,673...60,475,726
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within ISO MGI:1859840 (PMID:12555660) RGD PMID:12555660 NCBI chr 4:123,993,670...124,020,922
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 acts_upstream_of_or_within ISO MGI:3836442 (PMID:19633665) RGD PMID:19633665 NCBI chr 1:80,140,495...80,168,705
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
G Xrcc2 X-ray repair cross complementing 2 involved_in ISO (PMID:10422536) RGD PMID:10422536 NCBI chr 4:9,423,873...9,502,980
Ensembl chr 4:9,423,898...9,442,482 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in ISO (PMID:10422536) RGD PMID:10422536 NCBI chr 6:130,863,405...130,873,765
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:24657165) RGD PMID:24657165 NCBI chr 6:95,096,838...95,125,811
Ensembl chr 6:95,096,387...95,118,996 		JBrowse link
G Zfp668 zinc finger protein 668 involved_in ISO (PMID:34313816) RGD PMID:34313816 NCBI chr 1:182,474,633...182,484,957
Ensembl chr 1:182,474,633...182,492,878 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:1931221|MGI:2180033 (PMID:15980864), (PMID:21746928) RGD PMID:15980864 PMID:21746928 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110 		JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 involved_in ISO
IBA		 (PMID:22759634)
GO_REF:0000033		 RGD
GO_Central		 PMID:22759634 GO_REF:0000033 NCBI chr13:39,440,653...39,595,782
Ensembl chr13:39,440,889...39,595,670 		JBrowse link
DNA repair-dependent chromatin remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in IMP PMID:19282473 UniProt PMID:19282473 RGD:8553580 NCBI chr 1:159,896,889...159,920,505
Ensembl chr 1:159,896,880...159,920,627 		JBrowse link
G Aplf aprataxin and PNKP like factor involved_in ISO (PMID:21211722), (PMID:29905837) RGD PMID:21211722 PMID:29905837 NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633 		JBrowse link
G Asf1a anti-silencing function 1A histone chaperone involved_in ISO (PMID:29478807) RGD PMID:29478807 NCBI chr20:32,893,962...32,908,808
Ensembl chr20:32,893,573...32,908,808 		JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in ISO
ISS		 (PMID:19261746)
GO_REF:0000024		 RGD
UniProt		 PMID:19261746 GO_REF:0000024 NCBI chr16:18,068,830...18,074,938
Ensembl chr16:18,068,884...18,074,923 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISO
ISS		 (PMID:19202061), (PMID:19261746)
GO_REF:0000024		 RGD
UniProt		 PMID:19202061 PMID:19261746 GO_REF:0000024 NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080 		JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L involved_in ISO (PMID:19818714) RGD PMID:19818714 NCBI chr11:64,814,926...64,824,539
Ensembl chr11:64,814,926...64,824,538 		JBrowse link
G Hdac3 histone deacetylase 3 involved_in ISO (PMID:25301942) RGD PMID:25301942 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856 		JBrowse link
G Hdgfl2 HDGF like 2 involved_in ISO
IEA		 (PMID:26721387)
GO_REF:0000107		 RGD
Ensembl		 PMID:26721387 GO_REF:0000107 NCBI chr 9:909,581...929,195
Ensembl chr 9:909,614...929,186 		JBrowse link
G Hpf1 histone PARylation factor 1 involved_in ISO (PMID:32939087) RGD PMID:32939087 NCBI chr16:29,203,749...29,219,651
Ensembl chr16:29,183,256...29,219,716 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in NAS
ISO		 PMID:19282473
(PMID:10966108), (PMID:25301942)		 RGD PMID:10966108 PMID:25301942 PMID:19282473 RGD:8553580 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within ISO (PMID:24217620) RGD PMID:24217620 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319 		JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 involved_in ISO (PMID:32939087) RGD PMID:32939087 NCBI chr15:24,034,069...24,044,340
Ensembl chr15:24,034,106...24,044,338 		JBrowse link
G Phf1 PHD finger protein 1 involved_in ISO (PMID:23142980) RGD PMID:23142980 NCBI chr20:5,017,765...5,022,872
Ensembl chr20:5,017,893...5,022,871 		JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO
IEA
ISS		 (PMID:19203578), (PMID:19500350), (PMID:22980979), (PMID:23760478)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:19203578 PMID:19500350 PMID:22980979 PMID:23760478 GO_REF:0000024 GO_REF:0000107 NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO
ISS		 (PMID:18001824), (PMID:18001825), (PMID:22980979)
GO_REF:0000024		 RGD
UniProt		 PMID:18001824 PMID:18001825 PMID:22980979 GO_REF:0000024 NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:20100829) RGD PMID:20100829 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (MGI:6694658|PMID:32584788) RGD PMID:32584788 MGI:6694658 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Sirt7 sirtuin 7 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5789069|PMID:27225932)
(PMID:27436229)		 UniProt
RGD		 PMID:27225932 PMID:27436229 GO_REF:0000024 MGI:5789069 NCBI chr10:105,896,476...105,903,301
Ensembl chr10:105,896,476...105,903,172 		JBrowse link
G Trip12 thyroid hormone receptor interactor 12 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22884692)		 UniProt
RGD		 PMID:22884692 GO_REF:0000024 NCBI chr 9:85,916,691...86,043,312
Ensembl chr 9:85,916,691...86,051,403 		JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22884692)		 UniProt
Ensembl
RGD		 PMID:22884692 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:69,115,216...69,224,843
Ensembl chr 7:69,116,761...69,224,903 		JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:19202061)		 Ensembl
RGD		 PMID:19202061 GO_REF:0000107 NCBI chr17:9,523,793...9,592,810
Ensembl chr17:9,527,794...9,592,799 		JBrowse link
G Usp3 ubiquitin specific peptidase 3 involved_in ISO (PMID:17980597) RGD PMID:17980597 NCBI chr 8:67,078,249...67,154,109
Ensembl chr 8:67,079,927...67,154,111 		JBrowse link
G Usp51 ubiquitin specific peptidase 51 involved_in ISO (PMID:27083998) RGD PMID:27083998 NCBI chr  X:18,374,940...18,381,472
Ensembl chr  X:18,376,930...18,379,888 		JBrowse link
DNA replication proofreading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:2447628 (PMID:12429860)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:12429860 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:95,025,462...95,041,559
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:46,345,420...46,393,984
Ensembl chr12:46,345,420...46,393,939 		JBrowse link
G Polg DNA polymerase gamma, catalytic subunit involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:11897778), (PMID:37202477)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:11897778 PMID:37202477 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:133,382,764...133,399,578
Ensembl chr 1:133,382,766...133,398,567 		JBrowse link
DNA synthesis involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2d cyclin dependent kinase inhibitor 2D involved_in ISO (PMID:15750620) RGD PMID:15750620 NCBI chr 8:19,831,874...19,834,640
Ensembl chr 8:19,831,866...19,834,674 		JBrowse link
G Hrob homologous recombination factor with OB-fold involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:31467087)		 UniProt
Ensembl
RGD		 PMID:31467087 GO_REF:0000024 GO_REF:0000107 NCBI chr10:87,206,017...87,222,483
Ensembl chr10:87,206,049...87,222,483 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit involved_in ISO (PMID:11470886) RGD PMID:11470886 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in ISS
ISO		 GO_REF:0000024
(PMID:1730053), (PMID:24191025), (PMID:3335506)		 UniProt
RGD		 PMID:1730053 PMID:3335506 PMID:24191025 GO_REF:0000024 NCBI chr 1:95,025,462...95,041,559
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Pold4 DNA polymerase delta 4, accessory subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:201,526,591...201,528,406
Ensembl chr 1:201,526,665...201,528,401 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in ISO (PMID:1730053) RGD PMID:1730053 NCBI chr12:46,345,420...46,393,984
Ensembl chr12:46,345,420...46,393,939 		JBrowse link
G Polh DNA polymerase eta involved_in ISO (PMID:17563354) RGD PMID:17563354 NCBI chr 9:14,778,355...14,813,210
Ensembl chr 9:14,777,888...14,812,723 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO
IEA		 (MGI:5297784|PMID:17612497)
GO_REF:0000107		 RGD
Ensembl		 PMID:17612497 GO_REF:0000107 MGI:5297784 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:17563354) RGD PMID:17563354 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Wrnip1 WRN helicase interacting protein 1 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:15670210)		 UniProt
GO_Central
Ensembl
RGD		 PMID:15670210 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:31,621,410...31,641,659
Ensembl chr17:31,621,411...31,641,659 		JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pola1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO
ISS		 (PMID:1730053)
GO_REF:0000024		 RGD
UniProt		 PMID:1730053 GO_REF:0000024 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:154,417,893...154,456,687
Ensembl chr 1:154,418,084...154,456,665 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO MGI:3052754 (PMID:23993650) RGD PMID:23993650 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:17525340), (PMID:17643121), (PMID:19261748)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:17525340 PMID:17643121 PMID:19261748 GO_REF:0000024 GO_REF:0000107 NCBI chr14:8,796,281...8,810,625
Ensembl chr14:8,796,266...8,810,622 		JBrowse link
G Actr5 actin related protein 5 involved_in ISO (PMID:19014934) RGD PMID:19014934 NCBI chr 3:147,282,461...147,295,870
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Actr8 actin related protein 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:5,164,131...5,186,353
Ensembl chr16:5,164,129...5,178,577 		JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in ISO (MGI:3698695|PMID:17121854) RGD PMID:17121854 MGI:3698695 NCBI chr 1:159,896,889...159,920,505
Ensembl chr 1:159,896,880...159,920,627 		JBrowse link
G Aplf aprataxin and PNKP like factor involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:17396150)
MGI:4128102 (PMID:21211721)
GO_REF:0000033		 RGD
GO_Central		 PMID:17396150 PMID:21211721 GO_REF:0000033 NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633 		JBrowse link
G Atm ATM serine/threonine kinase involved_in ISO
IBA		 (PMID:26240375)
GO_REF:0000033		 RGD
GO_Central		 PMID:26240375 GO_REF:0000033 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO (PMID:11390642) RGD PMID:11390642 NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136 		JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in ISO
IBA
ISS		 (PMID:19261746), (PMID:19261748), (PMID:19261749)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:19261746 PMID:19261748 PMID:19261749 GO_REF:0000024 GO_REF:0000033 NCBI chr16:18,068,830...18,074,938
Ensembl chr16:18,068,884...18,074,923 		JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000104
(PMID:19261748)		 UniProt
GO_Central
RGD		 PMID:19261748 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr 6:24,369,021...24,788,416
Ensembl chr 6:24,369,022...24,833,951 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO (PMID:17525340), (PMID:17643121), (PMID:19261748), (PMID:22186889)
(MGI:5545964|PMID:22186889)		 RGD PMID:17525340 PMID:17643121 PMID:19261748 PMID:22186889 MGI:5545964 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within		 ISO (PMID:16845393)
MGI:2156556|MGI:2176173|MGI:2177226 (PMID:17476307), (PMID:9398843)		 RGD PMID:9398843 PMID:16845393 PMID:17476307 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:17525341), (PMID:19261746), (PMID:19261748)		 UniProt
GO_Central
RGD		 PMID:17525341 PMID:19261746 PMID:19261748 GO_REF:0000024 GO_REF:0000033 NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080 		JBrowse link
G Brcc3dc BRCA1/BRCA2-containing complex, subunit 3, domain containing involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:44,014,889...44,016,646
Ensembl chr 7:44,005,646...44,016,670 		JBrowse link
G Cdca5 cell division cycle associated 5 involved_in ISO
IBA		 (PMID:17349791)
GO_REF:0000033		 RGD
GO_Central		 PMID:17349791 GO_REF:0000033 NCBI chr 1:203,378,550...203,392,027
Ensembl chr 1:203,378,577...203,392,023 		JBrowse link
G Chek2 checkpoint kinase 2 involved_in ISO (PMID:18317453) RGD PMID:18317453 NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22325354)		 UniProt
RGD		 PMID:22325354 GO_REF:0000024 NCBI chr 3:140,709,984...140,756,757
Ensembl chr 3:140,709,991...140,756,696 		JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 involved_in ISO (PMID:22325354) RGD PMID:22325354 NCBI chr19:9,556,443...9,596,080
Ensembl chr19:9,556,260...9,596,080 		JBrowse link
G Dclre1c DNA cross-link repair 1C acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12615897)
GO_REF:0000107		 RGD
Ensembl		 PMID:12615897 GO_REF:0000107 NCBI chr17:74,775,828...74,810,089
Ensembl chr17:74,776,935...74,809,186 		JBrowse link
G Ddx1 DEAD-box helicase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:18710941)		 UniProt
RGD		 PMID:18710941 GO_REF:0000024 NCBI chr 6:35,996,469...36,027,340
Ensembl chr 6:35,996,469...36,027,365 		JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L involved_in ISO (PMID:23230272) RGD PMID:23230272 NCBI chr11:64,814,926...64,824,539
Ensembl chr11:64,814,926...64,824,538 		JBrowse link
G Eme1 essential meiotic structure-specific endonuclease 1 involved_in ISO
IBA		 (PMID:18413719)
GO_REF:0000033		 RGD
GO_Central		 PMID:18413719 GO_REF:0000033 NCBI chr10:79,586,718...79,595,515
Ensembl chr10:79,586,729...79,595,435 		JBrowse link
G Eme2 essential meiotic structure-specific endonuclease subunit 2 involved_in ISO
IBA		 (PMID:17289582)
GO_REF:0000033		 RGD
GO_Central		 PMID:17289582 GO_REF:0000033 NCBI chr10:13,913,216...13,915,991
Ensembl chr10:13,913,221...13,915,968 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit NOT|acts_upstream_of_or_within ISO MGI:2183944 (PMID:11707424)
MGI:2158940|MGI:2183944|MGI:3617449 (PMID:15199134), (PMID:17912366)		 RGD PMID:11707424 PMID:15199134 PMID:17912366 NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 acts_upstream_of_or_within ISO MGI:5308063 (PMID:22614755) RGD PMID:22614755 NCBI chr15:40,034,566...40,052,295
Ensembl chr15:40,034,568...40,055,306 		JBrowse link
G Exd2 exonuclease 3'-5' domain containing 2 involved_in ISO (PMID:26807646) RGD PMID:26807646 NCBI chr 6:100,116,867...100,150,452
Ensembl chr 6:100,116,867...100,150,442 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in ISO (PMID:19234442) RGD PMID:19234442 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 involved_in ISO (PMID:19234442) RGD PMID:19234442 NCBI chr 5:144,806,523...144,934,522
Ensembl chr 5:144,806,577...144,934,518 		JBrowse link
G Ggn gametogenetin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000002
MGI:5503309 (PMID:23451117)		 InterPro
RGD		 PMID:23451117 GO_REF:0000002 NCBI chr 1:84,470,488...84,474,120
Ensembl chr 1:84,470,508...84,474,114 		JBrowse link
G Haus3 HAUS augmin-like complex, subunit 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:76,580,549...76,599,542
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Hpf1 histone PARylation factor 1 involved_in ISO (PMID:32028527) RGD PMID:32028527 NCBI chr16:29,203,749...29,219,651
Ensembl chr16:29,183,256...29,219,716 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:20687897) RGD PMID:20687897 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
ISO		 GO_REF:0000024
(PMID:26438602)		 UniProt
RGD		 PMID:26438602 GO_REF:0000024 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Lig3 DNA ligase 3 involved_in ISO
IBA		 (PMID:19589734)
GO_REF:0000033		 RGD
GO_Central		 PMID:19589734 GO_REF:0000033 NCBI chr10:67,717,808...67,741,141
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:19589734), (PMID:9242410)
MGI:104517|MGI:1857732|MGI:3714783|MGI:894697 (PMID:12531011), (PMID:15175260), (PMID:17554302)		 RGD PMID:9242410 PMID:12531011 PMID:15175260 PMID:17554302 PMID:19589734 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G LOC102557137 E3 ubiquitin-protein ligase RNF168-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:40,065,873...40,067,029
Ensembl chr  X:40,065,873...40,067,207 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO
ISS		 (PMID:15988022)
GO_REF:0000024		 RGD
UniProt		 PMID:15988022 GO_REF:0000024 NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
G Marf1 meiosis regulator and mRNA stability factor 1 acts_upstream_of_or_within ISO MGI:3512917 (PMID:23090997) RGD PMID:23090997 NCBI chr10:888,053...932,760
Ensembl chr10:888,076...932,753 		JBrowse link
G Meioc meiosis specific with coiled-coil domain involved_in ISO (MGI:5770021|PMID:26742488) RGD PMID:26742488 MGI:5770021 NCBI chr10:87,628,807...87,646,485
Ensembl chr10:87,628,875...87,646,752 		JBrowse link
G Mpnd MPN domain containing involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:839,473...846,446
Ensembl chr 9:840,143...846,439 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:14657032), (PMID:26240375)
GO_REF:0000104
MGI:3027036 (PMID:17291760)		 RGD
UniProt		 PMID:14657032 PMID:17291760 PMID:26240375 GO_REF:0000104 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1858055 (PMID:17912366)		 Ensembl
RGD		 PMID:17912366 GO_REF:0000107 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Mta1 metastasis associated 1 involved_in ISO
IBA
IEA
ISS		 (PMID:19805145)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
(MGI:4366101|PMID:19805145)
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
Ensembl
UniProt		 PMID:19805145 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:4366101 NCBI chr 6:132,178,608...132,217,641
Ensembl chr 6:132,178,853...132,217,641 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in ISO (PMID:17289582), (PMID:18413719) RGD PMID:17289582 PMID:18413719 NCBI chr 1:202,790,295...202,796,008
Ensembl chr 1:202,790,466...202,795,843 		JBrowse link
G Nbn nibrin involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000002
(PMID:9590181)		 UniProt
InterPro
RGD		 PMID:9590181 GO_REF:0000002 GO_REF:0000024 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IBA		 GO_REF:0000024
MGI:1891258 (PMID:21270334)
GO_REF:0000033
(PMID:23230272), (PMID:24906880), (PMID:27568560), (PMID:28190768), (PMID:32028527)		 UniProt
RGD
GO_Central		 PMID:21270334 PMID:23230272 PMID:24906880 PMID:27568560 PMID:28190768 More... GO_REF:0000024 GO_REF:0000033 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:24,034,069...24,044,340
Ensembl chr15:24,034,106...24,044,338 		JBrowse link
G Parp3 poly (ADP-ribose) polymerase family, member 3 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:21211721), (PMID:21270334)
MGI:1340806 (PMID:21270334)
GO_REF:0000033		 RGD
GO_Central		 PMID:21211721 PMID:21270334 GO_REF:0000033 NCBI chr 8:107,111,010...107,117,073
Ensembl chr 8:107,111,012...107,116,782 		JBrowse link
G Parp9 poly (ADP-ribose) polymerase family, member 9 involved_in ISO (PMID:23230272) RGD PMID:23230272 NCBI chr11:64,780,977...64,814,995
Ensembl chr11:64,780,981...64,815,455 		JBrowse link
G Plk1 polo-like kinase 1 involved_in ISO (PMID:22325354) RGD PMID:22325354 NCBI chr 1:176,716,420...176,726,400
Ensembl chr 1:176,716,420...176,726,400 		JBrowse link
G Poln DNA polymerase nu involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:76,579,983...76,752,460
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Polq DNA polymerase theta involved_in ISO (PMID:22135286) RGD PMID:22135286 NCBI chr11:63,673,796...63,775,905
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:18710952)
MGI:1857113|MGI:2667593 (PMID:11751629), (PMID:12604618)
GO_REF:0000033		 RGD
GO_Central		 PMID:11751629 PMID:12604618 PMID:18710952 GO_REF:0000033 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 acts_upstream_of_or_within ISO MGI:5292341 (PMID:21743440) RGD PMID:21743440 NCBI chr 3:140,160,128...140,188,324
Ensembl chr 3:140,160,118...140,188,298 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in TAS
IBA
IEA
ISS
ISO		 GO_REF:0000033
GO_REF:0000118
GO_REF:0000002
GO_REF:0000024
(PMID:9590181)		 GO_Central
TreeGrafter
InterPro
UniProt
RGD		 PMID:9590181 PMID:10908350 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118, RGD:68816 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad54l RAD54 like acts_upstream_of_or_within ISO MGI:1335098 (PMID:15175260) RGD PMID:15175260 NCBI chr 5:129,575,431...129,605,100
Ensembl chr 5:129,575,378...129,605,070 		JBrowse link
G Rdm1 RAD52 motif containing 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr10:86,562,871...86,573,034
Ensembl chr10:86,539,553...86,573,034 		JBrowse link
G Rec8 REC8 meiotic recombination protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:29,109,862...29,117,327
Ensembl chr15:29,109,863...29,117,326 		JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO
IBA
ISS		 (PMID:19203578), (PMID:19203579), (PMID:22980979)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:19203578 PMID:19203579 PMID:22980979 GO_REF:0000024 GO_REF:0000033 NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Rnf169 ring finger protein 169 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:154,250,462...154,311,867
Ensembl chr 1:154,254,473...154,311,653 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
(PMID:18001824), (PMID:18001825), (PMID:22980979)		 UniProt
GO_Central
TreeGrafter
RGD		 PMID:18001824 PMID:18001825 PMID:22980979 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Setx senataxin involved_in ISO (PMID:17562789) RGD PMID:17562789 NCBI chr 3:12,428,091...12,480,801
Ensembl chr 3:12,427,635...12,480,803 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:21680843), (PMID:27568560) RGD PMID:21680843 PMID:27568560 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:111,243,445...111,387,272
Ensembl chr 9:111,247,702...111,349,665 		JBrowse link
G Tdp1 tyrosyl-DNA phosphodiesterase 1 involved_in ISO
IEA		 (PMID:12023295)
GO_REF:0000107		 RGD
Ensembl		 PMID:12023295 GO_REF:0000107 NCBI chr 6:119,163,192...119,231,029
Ensembl chr 6:119,163,166...119,231,021 		JBrowse link
G Tdp2 tyrosyl-DNA phosphodiesterase 2 involved_in ISO
IBA
IEA
ISS		 (PMID:19794497), (PMID:21030584)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:19794497 PMID:21030584 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:40,228,943...40,240,337
Ensembl chr17:40,228,947...40,240,313 		JBrowse link
G Tnks1bp1 tankyrase 1 binding protein 1 involved_in ISO
IBA		 (PMID:25749521)
GO_REF:0000033		 RGD
GO_Central		 PMID:25749521 GO_REF:0000033 NCBI chr 3:70,135,335...70,160,071
Ensembl chr 3:70,137,837...70,160,038 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857989 (PMID:17912366)		 Ensembl
RGD		 PMID:17912366 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Trip13 thyroid hormone receptor interactor 13 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:3719273 (PMID:17696610)
(MGI:4821667|PMID:20711356)		 UniProt
RGD		 PMID:17696610 PMID:20711356 GO_REF:0000024 MGI:4821667 NCBI chr 1:29,357,093...29,402,078
Ensembl chr 1:29,357,130...29,402,074 		JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
GO_REF:0000002
(PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:17643121), (PMID:19261748)
GO_REF:0000107		 UniProt
GO_Central
TreeGrafter
InterPro
RGD
Ensembl		 PMID:17525340 PMID:17525341 PMID:17525342 PMID:17643121 PMID:19261748 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:9,523,793...9,592,810
Ensembl chr17:9,527,794...9,592,799 		JBrowse link
G Vcp valosin-containing protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:10855792), (PMID:22120668)		 UniProt
RGD		 PMID:10855792 PMID:22120668 GO_REF:0000024 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:21639834) RGD PMID:21639834 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:9242410)
MGI:1926771 (PMID:11751629), (PMID:9875844)		 RGD PMID:9242410 PMID:9875844 PMID:11751629 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
G Xrcc5 X-ray repair cross complementing 5 acts_upstream_of_or_within
involved_in		 NAS
ISO		 MGI:1335098|MGI:2179987 (PMID:12531011)
(PMID:19581589)		 RGD PMID:12531011 PMID:19581589 PMID:11966321 RGD:727219 NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 acts_upstream_of_or_within TAS
ISO		 MGI:2179954 (PMID:11751629) RGD PMID:11751629 PMID:11966321 RGD:727219 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
G Zgrf1 zinc finger, GRF-type containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:216,012,911...216,075,608
Ensembl chr 2:216,013,005...216,074,750 		JBrowse link
double-strand break repair involved in meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting helicase 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:4129733 (PMID:26490168)		 GO_Central
RGD		 PMID:26490168 GO_REF:0000033 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Brme1 break repair meiotic recombinase recruitment factor 1 involved_in ISO (MGI:6443349|PMID:32463460), (MGI:6447091|PMID:32345962), (MGI:6448646|PMID:32460033) RGD PMID:32345962 PMID:32460033 PMID:32463460 MGI:6443349 MGI:6447091 MGI:6448646 NCBI chr19:23,990,049...24,011,774
Ensembl chr19:23,990,045...24,011,850 		JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in ISO (PMID:17639081) RGD PMID:17639081 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Fancd2 FA complementation group D2 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:146,679,014...146,743,422
Ensembl chr 4:146,679,179...146,743,412 		JBrowse link
G Hsf2bp heat shock transcription factor 2 binding protein involved_in ISO (MGI:6283956|PMID:30760716), (MGI:6443349|PMID:32463460), (MGI:6447091|PMID:32345962), (MGI:6456264|PMID:31242413) RGD PMID:30760716 PMID:31242413 PMID:32345962 PMID:32463460 MGI:6283956 MGI:6443349 MGI:6447091 MGI:6456264 NCBI chr20:10,035,562...10,123,059
Ensembl chr20:10,035,562...10,121,242 		JBrowse link
G Majin membrane anchored junction protein acts_upstream_of_or_within ISO MGI:1921651 (PMID:30718482) RGD PMID:30718482 NCBI chr 1:203,487,777...203,524,098
Ensembl chr 1:203,488,069...203,524,092 		JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO MGI:1349669|MGI:2178050|MGI:5511194 (PMID:27760146) RGD PMID:27760146 NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
G Morc2b microrchidia 2B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:12,314,341...12,318,421
Ensembl chr 7:12,314,349...12,318,421 		JBrowse link
G Prdm9 PR/SET domain 9 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6102131|PMID:25894966), (MGI:6114980|PMID:29478809)		 UniProt
RGD		 PMID:25894966 PMID:29478809 GO_REF:0000024 MGI:6102131 MGI:6114980 NCBI chr 1:56,505,579...56,525,726
Ensembl chr 1:56,505,579...56,525,652 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:15834424) RGD PMID:15834424 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks acts_upstream_of_or_within ISO MGI:3045334 (PMID:27760146) RGD PMID:27760146 NCBI chr 3:161,755,299...161,770,930
Ensembl chr 3:161,757,519...161,770,925 		JBrowse link
G Terb1 telomere repeat binding bouquet formation protein 1 acts_upstream_of_or_within ISO MGI:1921651 (PMID:30718482) RGD PMID:30718482 NCBI chr19:473,720...528,069
Ensembl chr19:473,218...528,084 		JBrowse link
G Terb2 telomere repeat binding bouquet formation protein 2 acts_upstream_of_or_within ISO MGI:1923913|MGI:2443187|MGI:6362934|MGI:6362936 (PMID:30718482) RGD PMID:30718482 NCBI chr 3:109,138,343...109,156,700
Ensembl chr 3:109,138,343...109,156,683 		JBrowse link
double-strand break repair via alternative nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Haus3 HAUS augmin-like complex, subunit 3 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr14:76,580,549...76,599,542
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Helq helicase, POLQ-like involved_in ISO (PMID:34937945) RGD PMID:34937945 NCBI chr14:8,818,582...8,862,926
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in ISO (MGI:6393148|PMID:31806351) RGD PMID:31806351 MGI:6393148 NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Lig3 DNA ligase 3 involved_in ISO UniProtKB:P13010 (PMID:24837021)
(MGI:5014103|PMID:21655080)		 RGD PMID:21655080 PMID:24837021 MGI:5014103 NCBI chr10:67,717,808...67,741,141
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Nbn nibrin involved_in IEA
ISO		 GO_REF:0000107
(MGI:6269043|PMID:28216226)
(PMID:28216226)		 Ensembl
RGD		 PMID:28216226 GO_REF:0000107 MGI:6269043 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Plk1 polo-like kinase 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:37440612), (PMID:37674080)		 Ensembl
RGD		 PMID:37440612 PMID:37674080 GO_REF:0000107 NCBI chr 1:176,716,420...176,726,400
Ensembl chr 1:176,716,420...176,726,400 		JBrowse link
G Poln DNA polymerase nu involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr14:76,579,983...76,752,460
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Polq DNA polymerase theta involved_in ISO
IBA		 (PMID:25643323), (PMID:25775267), (PMID:27311885), (PMID:27591252), (PMID:31562312), (PMID:32234782), (PMID:33577776), (PMID:34179826), (PMID:36455556), (PMID:37440612), (PMID:37674080)
GO_REF:0000033
(MGI:5621198|PMID:25642960), (MGI:6869820|PMID:29058711)		 RGD
GO_Central		 PMID:25642960 PMID:25643323 PMID:25775267 PMID:27311885 PMID:27591252 More... GO_REF:0000033 MGI:5621198 MGI:6869820 NCBI chr11:63,673,796...63,775,905
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:37440612)		 UniProt
RGD		 PMID:37440612 GO_REF:0000024 NCBI chr 4:161,634,047...161,639,437
Ensembl chr 4:161,634,048...161,639,371 		JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in ISO (PMID:37674080) RGD PMID:37674080 NCBI chr 8:103,887,805...103,931,662
Ensembl chr 8:103,887,865...103,931,674 		JBrowse link
double-strand break repair via break-induced replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC129365.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 2:141,551,434...141,554,016 JBrowse link
G Cdc45 cell division cycle 45 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:82,185,427...82,210,630
Ensembl chr11:82,185,473...82,210,619 		JBrowse link
G Cdc7 cell division cycle 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:2,804,660...2,824,796
Ensembl chr14:2,804,661...2,824,778 		JBrowse link
G Gins2 GINS complex subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:48,626,770...48,639,523
Ensembl chr19:48,626,770...48,639,339 		JBrowse link
G Gins4 GINS complex subunit 4 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:68,787,572...68,799,938
Ensembl chr16:68,767,339...68,802,273 		JBrowse link
G Mcm2 minichromosome maintenance complex component 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:121,346,434...121,360,962
Ensembl chr 4:121,346,434...121,360,847 		JBrowse link
G Mcm3 minichromosome maintenance complex component 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:23,219,169...23,237,314
Ensembl chr 9:23,219,169...23,237,314 		JBrowse link
G Mcm4 minichromosome maintenance complex component 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:85,258,443...85,272,144
Ensembl chr11:85,258,443...85,272,144 		JBrowse link
G Mcm5 minichromosome maintenance complex component 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:13,483,030...13,504,389
Ensembl chr19:13,483,066...13,504,389 		JBrowse link
G Mcm6 minichromosome maintenance complex component 6 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr13:39,826,745...39,851,937
Ensembl chr13:39,826,763...39,851,960 		JBrowse link
G Mcm7 minichromosome maintenance complex component 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:17,042,207...17,049,470
Ensembl chr12:17,042,212...17,050,063 		JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 1:202,790,295...202,796,008
Ensembl chr 1:202,790,466...202,795,843 		JBrowse link
double-strand break repair via classical nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:29545921) RGD PMID:29545921 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO (PMID:29545921) RGD PMID:29545921 NCBI chr 2:39,647,393...39,686,229
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
G Lig4 DNA ligase 4 involved_in ISO (PMID:24837021) RGD PMID:24837021 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Rnf168 ring finger protein 168 involved_in IEA
ISO		 GO_REF:0000107
(PMID:27153538)		 Ensembl
RGD		 PMID:27153538 GO_REF:0000107 NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in ISO (PMID:31135337) RGD PMID:31135337 NCBI chr 8:103,887,805...103,931,662
Ensembl chr 8:103,887,865...103,931,674 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Uvrag UV radiation resistance associated involved_in ISO (PMID:22542840) RGD PMID:22542840 NCBI chr 1:153,185,356...153,442,200
Ensembl chr 1:153,185,395...153,442,136 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in ISO (PMID:24095731) RGD PMID:24095731 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5702356|PMID:26446488)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:26446488 GO_REF:0000024 GO_REF:0000107 MGI:5702356 NCBI chr 7:8,561,015...8,578,243
Ensembl chr 7:8,563,779...8,576,539 		JBrowse link
double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07031480.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Ankle1 ankyrin repeat and LEM domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729 		JBrowse link
G Ap5s1 adaptor related protein complex 5 subunit sigma 1 involved_in ISO (PMID:20613862) RGD PMID:20613862 NCBI chr 3:118,429,618...118,432,929
Ensembl chr 3:118,429,637...118,432,926 		JBrowse link
G Ap5z1 adaptor related protein complex 5 subunit zeta 1 involved_in ISO (PMID:20613862) RGD PMID:20613862 NCBI chr12:12,093,834...12,109,043
Ensembl chr12:12,093,834...12,108,511 		JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within
involved_in		 ISO MGI:1857132 (PMID:19061978)
(PMID:10802669)		 RGD PMID:10802669 PMID:19061978 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Aunip aurora kinase A and ninein interacting protein involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:29042561)		 UniProt
Ensembl
RGD		 PMID:29042561 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:146,722,329...146,734,924
Ensembl chr 5:146,722,337...146,736,501 		JBrowse link
G Blm BLM RecQ like helicase involved_in ISO
IBA		 (PMID:23543748)
GO_REF:0000033		 RGD
GO_Central		 PMID:23543748 GO_REF:0000033 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
GO_REF:0000118
(PMID:17349954), (PMID:28398198)		 Ensembl
GO_Central
TreeGrafter
RGD		 PMID:17349954 PMID:28398198 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
ISS		 GO_REF:0000107
MGI:2653913|MGI:2653914 (PMID:15485900)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000002
(PMID:20729832), (PMID:21719596), (PMID:28398198)
GO_REF:0000024		 Ensembl
RGD
TreeGrafter
GO_Central
InterPro
UniProt		 PMID:15485900 PMID:20729832 PMID:21719596 PMID:28398198 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567 		JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 involved_in ISO (PMID:25593309) RGD PMID:25593309 NCBI chr 4:157,898,503...157,931,632
Ensembl chr 4:157,899,391...157,931,541 		JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in ISO (PMID:17639081) RGD PMID:17639081 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Epc1 enhancer of polycomb homolog 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr17:54,503,358...54,594,444
Ensembl chr17:54,503,358...54,594,425 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO
IBA		 (PMID:14728600)
GO_REF:0000033		 RGD
GO_Central		 PMID:14728600 GO_REF:0000033 NCBI chr10:2,416,259...2,448,364
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Ercc4l1 excision repair cross-complementing rodent repair deficiency, complementation group 4-like 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr10:954,927...983,651
Ensembl chr10:954,977...983,174 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:26833090) RGD PMID:26833090 NCBI chr 9:46,309,477...46,354,478
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Exd2 exonuclease 3'-5' domain containing 2 involved_in ISO (PMID:26807646) RGD PMID:26807646 NCBI chr 6:100,116,867...100,150,452
Ensembl chr 6:100,116,867...100,150,442 		JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 involved_in ISO (PMID:20603015), (PMID:20603016) RGD PMID:20603015 PMID:20603016 NCBI chr 1:117,915,323...117,945,044
Ensembl chr 1:117,917,099...117,944,977 		JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:66,749,506...66,787,590
Ensembl chr17:66,749,534...66,787,590 		JBrowse link
G Fsbp fibrinogen silencer binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:25,058,003...25,064,276
Ensembl chr 5:25,032,066...25,104,616 		JBrowse link
G Gen1 GEN1 Holliday junction 5' flap endonuclease involved_in ISO (PMID:23166748) RGD PMID:23166748 NCBI chr 6:33,947,599...33,978,461
Ensembl chr 6:33,948,206...33,978,401 		JBrowse link
G H2ax H2A.X variant histone acts_upstream_of_or_within ISO MGI:2156048 (PMID:11934988) RGD PMID:11934988 NCBI chr 8:44,671,907...44,673,262
Ensembl chr 8:44,671,786...44,673,239 		JBrowse link
G Helq helicase, POLQ-like involved_in ISO (PMID:19995904) RGD PMID:19995904 NCBI chr14:8,818,582...8,862,926
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Htatsf1 HIV-1 Tat specific factor 1 involved_in ISO (PMID:35597237) RGD PMID:35597237 NCBI chr  X:134,935,426...134,949,607
Ensembl chr  X:134,935,426...134,949,607 		JBrowse link
G Hus1 HUS1 checkpoint clamp component involved_in ISO
IBA		 (MGI:3690191|PMID:16278671)
GO_REF:0000033		 RGD
GO_Central		 PMID:16278671 GO_REF:0000033 MGI:3690191 NCBI chr14:83,688,702...83,703,466
Ensembl chr14:83,688,708...83,703,442 		JBrowse link
G Inip INTS3 and NABP interacting protein involved_in ISO (PMID:19683501) RGD PMID:19683501 NCBI chr 5:74,648,392...74,662,628
Ensembl chr 5:74,648,392...74,662,628 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:18026119) RGD PMID:18026119 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ints3 integrator complex subunit 3 involved_in ISO (PMID:19683501) RGD PMID:19683501 NCBI chr 2:175,859,421...175,911,683
Ensembl chr 2:175,859,440...175,911,709 		JBrowse link
G Kash5 KASH domain containing 5 acts_upstream_of_or_within ISO (PMID:24062341) RGD PMID:24062341 NCBI chr 1:95,668,918...95,691,353
Ensembl chr 1:95,668,886...95,691,368 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(MGI:6446379|PMID:30297459)
(PMID:27153538)		 UniProt
GO_Central
Ensembl
RGD		 PMID:27153538 PMID:30297459 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:6446379 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Kdm4d lysine demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) RGD PMID:24550317 NCBI chr 8:11,279,756...11,304,920
Ensembl chr 8:11,268,859...11,305,290 		JBrowse link
G LOC120093168 nuclear ubiquitous casein and cyclin-dependent kinase substrate 1-like involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 6:136,594,866...136,595,965
Ensembl chr 6:136,594,855...136,596,600 		JBrowse link
G Mbtd1 mbt domain containing 1 involved_in ISO (PMID:27153538), (PMID:32209463) RGD PMID:27153538 PMID:32209463 NCBI chr10:78,839,140...78,895,413
Ensembl chr10:78,839,036...78,893,720 		JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor involved_in ISO
IBA
IEA
ISS		 (PMID:23401855)
GO_REF:0000033
GO_REF:0000118
(MGI:5437561|PMID:22771120)
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
UniProt		 PMID:22771120 PMID:23401855 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:5437561 NCBI chr 3:120,086,741...120,117,008
Ensembl chr 3:120,086,763...120,117,008 		JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in ISO
IBA
IEA
ISS		 (PMID:22771115), (PMID:23401855)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
(MGI:5437561|PMID:22771120), (MGI:5525985|PMID:23401855)		 RGD
GO_Central
Ensembl
UniProt		 PMID:22771115 PMID:22771120 PMID:23401855 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:5437561 MGI:5525985 NCBI chr20:32,818,219...32,929,577
Ensembl chr20:32,844,951...32,929,600 		JBrowse link
G Meiob meiosis specific with OB-fold involved_in ISS
ISO		 GO_REF:0000024
(MGI:5527015|PMID:24068956), (MGI:5538413|PMID:24240703)		 UniProt
RGD		 PMID:24068956 PMID:24240703 GO_REF:0000024 MGI:5527015 MGI:5538413 NCBI chr10:13,833,170...13,865,684
Ensembl chr10:13,833,750...13,865,046 		JBrowse link
G Mms22l MMS22-like, DNA repair protein involved_in ISO
IBA		 (PMID:21055983), (PMID:21055984), (PMID:21055985), (PMID:27797818)
GO_REF:0000033		 RGD
GO_Central		 PMID:21055983 PMID:21055984 PMID:21055985 PMID:27797818 GO_REF:0000033 NCBI chr 5:38,197,707...38,313,745
Ensembl chr 5:38,197,779...38,313,745 		JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in ISO
ISS		 (PMID:20332121)
GO_REF:0000024		 RGD
UniProt		 PMID:20332121 GO_REF:0000024 NCBI chr 8:90,642,988...90,664,518
Ensembl chr 8:90,642,988...90,664,519 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISS
ISO
IEA
IBA		 GO_REF:0000024
(MGI:3839734|PMID:18854157)
(PMID:15741314), (PMID:24316220), (PMID:27814491), (PMID:27889449), (PMID:28867292), (PMID:29670289), (PMID:30612738), (PMID:30787182), (PMID:31353207), (PMID:36563124), (PMID:38128537)
GO_REF:0000118
GO_REF:0000107
GO_REF:0000033		 UniProt
RGD
TreeGrafter
Ensembl
GO_Central		 PMID:15741314 PMID:18854157 PMID:24316220 PMID:27814491 PMID:27889449 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:3839734 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nabp1 nucleic acid binding protein 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:19605351), (PMID:19683501)		 UniProt
GO_Central
RGD		 PMID:19605351 PMID:19683501 GO_REF:0000024 GO_REF:0000033 NCBI chr 9:50,098,552...50,133,982
Ensembl chr 9:50,126,726...50,134,107 		JBrowse link
G Nabp2 nucleic acid binding protein 2 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
(PMID:19605351), (PMID:19683501)		 UniProt
TreeGrafter
GO_Central
Ensembl
RGD		 PMID:19605351 PMID:19683501 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:830,949...836,551
Ensembl chr 7:830,949...838,027 		JBrowse link
G Nbn nibrin involved_in IEA
ISO
IBA		 GO_REF:0000107
(PMID:22464731), (PMID:23115235), (PMID:27814491), (PMID:27889449), (PMID:28867292), (PMID:30787182), (PMID:30952868)
GO_REF:0000033
GO_REF:0000118		 Ensembl
RGD
GO_Central
TreeGrafter		 PMID:22464731 PMID:23115235 PMID:27814491 PMID:27889449 PMID:28867292 More... GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:180,030,355...180,058,541
Ensembl chr 1:180,030,160...180,058,417 		JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase involved_in ISO
IBA
IEA
ISS		 (PMID:16810316)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
GO_REF:0000024
GO_REF:0000002		 RGD
GO_Central
TreeGrafter
Ensembl
UniProt
InterPro		 PMID:16810316 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:90,936,112...91,173,435
Ensembl chr 7:90,936,112...91,164,899 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO
IEA
IBA		 (PMID:26323318)
GO_REF:0000118
GO_REF:0000033		 RGD
TreeGrafter
GO_Central		 PMID:26323318 GO_REF:0000033 GO_REF:0000118 NCBI chr13:43,345,091...43,374,316
Ensembl chr13:43,345,115...43,370,229 		JBrowse link
G Palb2 partner and localizer of BRCA2 involved_in ISO
IBA		 (PMID:19369211), (PMID:19423707), (PMID:26323318), (PMID:28398198)
GO_REF:0000033		 RGD
GO_Central		 PMID:19369211 PMID:19423707 PMID:26323318 PMID:28398198 GO_REF:0000033 NCBI chr 1:176,665,076...176,689,053
Ensembl chr 1:176,665,076...176,688,990 		JBrowse link
G Pogz pogo transposable element derived with ZNF domain acts_upstream_of_or_within_positive_effect ISO (PMID:26721387) RGD PMID:26721387 NCBI chr 2:182,394,269...182,440,711
Ensembl chr 2:182,380,768...182,440,707 		JBrowse link
G Poll DNA polymerase lambda involved_in ISO
ISS		 (PMID:20693240)
GO_REF:0000024		 RGD
UniProt		 PMID:20693240 GO_REF:0000024 NCBI chr 1:244,400,202...244,408,762
Ensembl chr 1:244,400,204...244,408,662 		JBrowse link
G Poln DNA polymerase nu involved_in ISO (PMID:19995904) RGD PMID:19995904 NCBI chr14:76,579,983...76,752,460
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:181,392,899...181,399,703
Ensembl chr 1:181,392,923...181,399,659 		JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 involved_in ISO (PMID:22909820) RGD PMID:22909820 NCBI chr 3:46,254,338...46,347,076
Ensembl chr 3:46,254,330...46,347,076 		JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 acts_upstream_of_or_within ISO MGI:1929645 (PMID:22711701) RGD PMID:22711701 NCBI chr 3:140,160,128...140,188,324
Ensembl chr 3:140,160,118...140,188,298 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in IEA
ISO		 GO_REF:0000107
(PMID:27889449), (PMID:28867292)		 Ensembl
RGD		 PMID:27889449 PMID:28867292 GO_REF:0000107 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad51 RAD51 recombinase acts_upstream_of_or_within
involved_in		 IEP
ISO		 (PMID:15359272), (PMID:15485900)
(PMID:15834424)
(PMID:17996710), (PMID:17996711), (PMID:18417535), (PMID:22778135), (PMID:23509288), (PMID:26681308), (PMID:26811421), (PMID:27239033), (PMID:32640219)
(PMID:16428451)		 RGD PMID:15359272 PMID:15485900 PMID:15834424 PMID:16428451 PMID:17996710 More... RGD:9831188 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO
IBA		 (PMID:26323318)
GO_REF:0000033		 RGD
GO_Central		 PMID:26323318 GO_REF:0000033 NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rad51b RAD51 paralog B involved_in ISO
IBA		 (PMID:23149936)
GO_REF:0000033		 RGD
GO_Central		 PMID:23149936 GO_REF:0000033 NCBI chr 6:98,096,525...98,640,988
Ensembl chr 6:98,098,868...98,640,979 		JBrowse link
G Rad51c RAD51 paralog C involved_in ISO (PMID:23149936) RGD PMID:23149936 NCBI chr10:72,205,032...72,231,643
Ensembl chr10:72,205,032...72,231,248 		JBrowse link
G Rad51d RAD51 paralog D involved_in ISO
IBA		 (PMID:23149936)
GO_REF:0000033		 RGD
GO_Central		 PMID:23149936 GO_REF:0000033 NCBI chr10:67,805,720...67,824,452
Ensembl chr10:67,740,712...67,824,434 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:12379650)		 GO_Central
RGD		 PMID:12379650 GO_REF:0000033 NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
G Rad54b RAD54 homolog B acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:16428451)
MGI:3617695|MGI:894697 (PMID:16428451), (PMID:19061978)
GO_REF:0000033		 RGD
GO_Central		 PMID:16428451 PMID:19061978 GO_REF:0000033 NCBI chr 5:25,032,112...25,104,630
Ensembl chr 5:25,032,066...25,104,616 		JBrowse link
G Rad54l RAD54 like acts_upstream_of_or_within ISO MGI:2183934|MGI:3605986 (PMID:16428451), (PMID:19061978) RGD PMID:16428451 PMID:19061978 NCBI chr 5:129,575,431...129,605,100
Ensembl chr 5:129,575,378...129,605,070 		JBrowse link
G Rbbp8 RB binding protein 8, endonuclease involved_in ISS
ISO		 GO_REF:0000024
(PMID:26721387), (PMID:27814491), (PMID:27889449), (PMID:30787182)		 UniProt
RGD		 PMID:26721387 PMID:27814491 PMID:27889449 PMID:30787182 GO_REF:0000024 NCBI chr18:2,922,985...2,988,851
Ensembl chr18:2,921,286...2,988,846 		JBrowse link
G Rec8 REC8 meiotic recombination protein acts_upstream_of_or_within ISO MGI:3652039 (PMID:22711701) RGD PMID:22711701 NCBI chr15:29,109,862...29,117,327
Ensembl chr15:29,109,863...29,117,326 		JBrowse link
G Recql RecQ like helicase involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:175,308,337...175,332,965
Ensembl chr 4:175,304,117...175,332,945 		JBrowse link
G Recql4 RecQ like helicase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:108,423,453...108,430,790
Ensembl chr 7:108,423,455...108,430,619 		JBrowse link
G Recql5 RecQ like helicase 5 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:101,126,544...101,165,739
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:43,131,841...43,290,102
Ensembl chr20:43,132,363...43,290,099 		JBrowse link
G Rffl ring finger and FYVE-like domain containing E3 ubiquitin protein ligase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:67,740,711...67,803,669
Ensembl chr10:67,740,712...67,824,434 		JBrowse link
G Rfwd3 ring finger and WD repeat domain 3 involved_in ISO (PMID:26474068), (PMID:28575657), (PMID:28575658), (PMID:28691929) RGD PMID:26474068 PMID:28575657 PMID:28575658 PMID:28691929 NCBI chr19:39,235,883...39,268,479
Ensembl chr19:39,236,787...39,268,479 		JBrowse link
G Rmi1 RecQ mediated genome instability 1 involved_in ISO
IBA		 (PMID:23543748)
GO_REF:0000033		 RGD
GO_Central		 PMID:23543748 GO_REF:0000033 NCBI chr17:6,256,533...6,264,523
Ensembl chr17:6,256,450...6,264,695 		JBrowse link
G Rmi2 RecQ mediated genome instability 2 involved_in ISO (PMID:23543748) RGD PMID:23543748 NCBI chr10:4,829,333...4,837,264
Ensembl chr10:4,830,553...4,837,235 		JBrowse link
G Rnf138 ring finger protein 138 involved_in ISO
IEA
IBA
ISS		 (PMID:26502055), (PMID:26502057)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000024		 RGD
TreeGrafter
GO_Central
UniProt		 PMID:26502055 PMID:26502057 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr18:12,291,557...12,315,931
Ensembl chr18:12,291,590...12,315,930 		JBrowse link
G Rnf138l1 ring finger protein 138 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:30,739,541...30,740,614
Ensembl chr  X:30,739,413...30,740,613 		JBrowse link
G Rnf169 ring finger protein 169 involved_in ISO (PMID:22492721) RGD PMID:22492721 NCBI chr 1:154,250,462...154,311,867
Ensembl chr 1:154,254,473...154,311,653 		JBrowse link
G Rpa1 replication protein A1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:17765923)
MGI:3582609 (PMID:15470499)
GO_REF:0000033		 RGD
GO_Central		 PMID:15470499 PMID:17765923 GO_REF:0000033 NCBI chr10:60,148,869...60,199,970
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
(PMID:17765923)		 UniProt
GO_Central
TreeGrafter
RGD		 PMID:17765923 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rpa3 replication protein A3 involved_in ISO
IBA		 (PMID:17765923)
GO_REF:0000033		 RGD
GO_Central		 PMID:17765923 GO_REF:0000033 NCBI chr 4:36,304,649...36,307,755
Ensembl chr 4:36,304,651...36,307,709 		JBrowse link
G Rpa3l1 replication protein A3 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:45,908,653...45,909,063
Ensembl chr12:45,908,683...45,909,048 		JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:28834754), (PMID:29670289) RGD PMID:28834754 PMID:29670289 NCBI chr 3:145,761,549...145,794,420
Ensembl chr 3:145,761,558...145,794,386 		JBrowse link
G Sem1 SEM1 26S proteasome subunit involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:15359272)		 GO_Central
RGD		 PMID:15359272 GO_REF:0000033 NCBI chr 4:34,671,848...34,692,005
Ensembl chr 4:34,671,848...34,692,005 		JBrowse link
G Sfpq splicing factor proline and glutamine rich acts_upstream_of_or_within ISO (PMID:20813759) RGD PMID:20813759 NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472 		JBrowse link
G Sfr1 SWI5-dependent homologous recombination repair protein 1 involved_in ISS
IBA
ISO
IEA		 GO_REF:0000024
GO_REF:0000033
(MGI:4868525|PMID:20976249)
GO_REF:0000107
(PMID:21252223)		 UniProt
GO_Central
RGD
Ensembl		 PMID:20976249 PMID:21252223 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:4868525 NCBI chr 1:246,619,235...246,623,250
Ensembl chr 1:246,597,044...246,623,250 		JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in ISO
IEA
IBA		 (PMID:19595721)
GO_REF:0000118
GO_REF:0000033		 RGD
TreeGrafter
GO_Central		 PMID:19595721 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:181,286,190...181,291,739
Ensembl chr 1:181,283,921...181,291,775 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO (PMID:19595721), (PMID:19596235) RGD PMID:19595721 PMID:19596235 NCBI chr10:11,526,623...11,549,313
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
G Smc5 structural maintenance of chromosomes 5 involved_in ISO
IBA		 (PMID:16810316)
GO_REF:0000033		 RGD
GO_Central		 PMID:16810316 GO_REF:0000033 NCBI chr 1:220,769,366...220,839,138
Ensembl chr 1:220,769,366...220,839,096 		JBrowse link
G Smc6 structural maintenance of chromosomes 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:33,978,730...34,033,201
Ensembl chr 6:33,978,716...34,031,746 		JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO
IBA		 (PMID:23509288), (PMID:27967308), (PMID:34697795)
GO_REF:0000033		 RGD
GO_Central		 PMID:23509288 PMID:27967308 PMID:34697795 GO_REF:0000033 NCBI chr11:84,766,593...85,007,597
Ensembl chr11:84,766,593...85,007,600 		JBrowse link
G Swi5 SWI5 homologous recombination repair protein involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(MGI:4868525|PMID:20976249)
(PMID:21252223)		 UniProt
GO_Central
RGD		 PMID:20976249 PMID:21252223 GO_REF:0000024 GO_REF:0000033 MGI:4868525 NCBI chr 3:15,574,687...15,583,760
Ensembl chr 3:15,564,715...15,583,805 		JBrowse link
G Swsap1 SWIM-type zinc finger 7 associated protein 1 involved_in ISO
IBA		 (PMID:21965664)
GO_REF:0000033		 RGD
GO_Central		 PMID:21965664 GO_REF:0000033 NCBI chr 8:20,486,680...20,489,213
Ensembl chr 8:20,486,678...20,489,211 		JBrowse link
G Tonsl tonsoku-like, DNA repair protein involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:21055983), (PMID:21055984), (PMID:21055985), (PMID:27338793), (PMID:27797818), (PMID:30773278)		 UniProt
GO_Central
RGD		 PMID:21055983 PMID:21055984 PMID:21055985 PMID:27338793 PMID:27797818 More... GO_REF:0000024 GO_REF:0000033 NCBI chr 7:108,345,704...108,360,792
Ensembl chr 7:108,346,047...108,360,750 		JBrowse link
G Top3a DNA topoisomerase III alpha involved_in ISO (PMID:23543748) RGD PMID:23543748 NCBI chr10:45,419,219...45,457,356
Ensembl chr10:45,419,217...45,457,559 		JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in ISO (PMID:26811421), (PMID:35597237) RGD PMID:26811421 PMID:35597237 NCBI chr 8:103,887,805...103,931,662
Ensembl chr 8:103,887,865...103,931,674 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO (PMID:17349954) RGD PMID:17349954 NCBI chr 7:30,154,330...30,184,373
Ensembl chr 7:30,154,616...30,184,355 		JBrowse link
G Wdr48 WD repeat domain 48 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3877670 (PMID:24001775)		 GO_Central
RGD		 PMID:24001775 GO_REF:0000033 NCBI chr 8:119,622,053...119,655,264
Ensembl chr 8:119,622,048...119,655,264 		JBrowse link
G Wrn WRN RecQ like helicase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Xrcc2 X-ray repair cross complementing 2 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:23149936)
MGI:3654106 (PMID:16777961)
GO_REF:0000033		 RGD
GO_Central		 PMID:16777961 PMID:23149936 GO_REF:0000033 NCBI chr 4:9,423,873...9,502,980
Ensembl chr 4:9,423,898...9,442,482 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in ISO (PMID:23149936) RGD PMID:23149936 NCBI chr 6:130,863,405...130,873,765
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:18026119) RGD PMID:18026119 NCBI chr 6:127,706,739...127,736,499
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
G Zfyve26 zinc finger FYVE-type containing 26 involved_in ISO
IEA		 (PMID:20613862)
GO_REF:0000107
GO_REF:0000002		 RGD
Ensembl
InterPro		 PMID:20613862 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:98,031,874...98,095,538
Ensembl chr 6:98,032,520...98,095,480 		JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 involved_in ISO (PMID:25593309) RGD PMID:25593309 NCBI chr 3:154,528,917...154,629,532
Ensembl chr 3:154,529,043...154,628,463 		JBrowse link
G Zswim7 zinc finger, SWIM-type containing 7 involved_in ISO
IBA		 (PMID:21965664)
GO_REF:0000033		 RGD
GO_Central		 PMID:21965664 GO_REF:0000033 NCBI chr10:46,953,311...46,969,800
Ensembl chr10:46,957,525...46,969,671 		JBrowse link
double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplf aprataxin and PNKP like factor involved_in ISO (PMID:23689425) RGD PMID:23689425 NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633 		JBrowse link
G Cyren cell cycle regulator of NHEJ involved_in ISO
IBA
IEA
ISS		 (PMID:24610814)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
(MGI:6202149|PMID:30017584)		 RGD
GO_Central
Ensembl
UniProt		 PMID:24610814 PMID:30017584 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:6202149 NCBI chr 4:63,547,311...63,553,394
Ensembl chr 4:63,547,335...63,551,602 		JBrowse link
G Dclre1a DNA cross-link repair 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:255,569,911...255,589,815
Ensembl chr 1:255,569,919...255,589,678 		JBrowse link
G Dclre1b DNA cross-link repair 1B involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:191,309,909...191,318,399
Ensembl chr 2:191,309,913...191,318,423 		JBrowse link
G Dclre1c DNA cross-link repair 1C involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr17:74,775,828...74,810,089
Ensembl chr17:74,776,935...74,809,186 		JBrowse link
G Dntt DNA nucleotidylexotransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:239,856,391...239,888,283
Ensembl chr 1:239,856,391...239,888,282 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr10:2,416,259...2,448,364
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:9600082) RGD PMID:9600082 NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO (PMID:9600082) RGD PMID:9600082 NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140 		JBrowse link
G Iffo1 intermediate filament family orphan 1 involved_in ISO (PMID:31548606) RGD PMID:31548606 NCBI chr 4:157,945,075...157,962,302
Ensembl chr 4:157,945,107...157,962,302 		JBrowse link
G Kdm2a lysine demethylase 2A involved_in ISO (PMID:21187428) RGD PMID:21187428 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787 		JBrowse link
G Lig1 DNA ligase 1 acts_upstream_of_or_within ISO (PMID:21655080) RGD PMID:21655080 NCBI chr 1:74,165,688...74,204,400
Ensembl chr 1:74,165,842...74,204,413 		JBrowse link
G Lig3 DNA ligase 3 acts_upstream_of_or_within ISO (PMID:21655080) RGD PMID:21655080 NCBI chr10:67,717,808...67,741,141
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (MGI:5705227|PMID:12361565)
MGI:1857720|MGI:1857732 (PMID:10823907), (PMID:16777961)
GO_REF:0000033
UniProtKB:Q15554 (PMID:12517771), (PMID:17290226), (PMID:23275564), (PMID:9809069)		 RGD
GO_Central		 PMID:9809069 PMID:10823907 PMID:12361565 PMID:12517771 PMID:16777961 More... GO_REF:0000033 MGI:5705227 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857946 (PMID:15084308)		 Ensembl
RGD		 PMID:15084308 GO_REF:0000107 NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISO
IEA
ISS
IBA		 (PMID:9651580)
GO_REF:0000118
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107		 RGD
TreeGrafter
UniProt
GO_Central
Ensembl		 PMID:9651580 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nhej1 nonhomologous end-joining factor 1 involved_in ISS
IBA
IEA
ISO		 PMID:16439205
GO_REF:0000033
GO_REF:0000117
(MGI:5807276|PMID:27798842), (MGI:5822993|PMID:28051062)
(PMID:16439204), (PMID:16439205), (PMID:17717001), (PMID:18158905), (PMID:18644470), (PMID:19056826), (PMID:20558749), (PMID:27437582), (PMID:28500754), (PMID:30250067)
GO_REF:0000024		 GO_Central
UniProt
RGD		 PMID:16439204 PMID:16439205 PMID:17717001 PMID:18158905 PMID:18644470 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000117 MGI:5807276 MGI:5822993, RGD:8553261 NCBI chr 9:76,526,322...76,622,488
Ensembl chr 9:76,526,324...76,622,444 		JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase NOT|involved_in ISO (PMID:16810316) RGD PMID:16810316 NCBI chr 7:90,936,112...91,173,435
Ensembl chr 7:90,936,112...91,164,899 		JBrowse link
G Paxx PAXX, non-homologous end joining factor involved_in ISO
IBA		 (PMID:25574025), (PMID:25670504), (PMID:25941166), (PMID:30250067)
GO_REF:0000033
(MGI:5807276|PMID:27798842), (MGI:5822993|PMID:28051062)		 RGD
GO_Central		 PMID:25574025 PMID:25670504 PMID:25941166 PMID:27798842 PMID:28051062 More... GO_REF:0000033 MGI:5807276 MGI:5822993 NCBI chr 3:8,274,762...8,276,322
Ensembl chr 3:8,274,762...8,276,521 		JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase involved_in ISO (PMID:15385968), (PMID:28453785) RGD PMID:15385968 PMID:28453785 NCBI chr 1:95,341,465...95,346,921
Ensembl chr 1:95,341,620...95,346,920 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit involved_in ISO
ISS		 (PMID:11470886)
GO_REF:0000024		 RGD
UniProt		 PMID:11470886 GO_REF:0000024 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Polb DNA polymerase beta involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Poll DNA polymerase lambda involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000118
GO_REF:0000033
(PMID:19806195), (PMID:30250067)		 UniProt
TreeGrafter
GO_Central
RGD		 PMID:19806195 PMID:30250067 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:244,400,202...244,408,762
Ensembl chr 1:244,400,204...244,408,662 		JBrowse link
G Polm DNA polymerase mu involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:80,707,075...80,716,677
Ensembl chr14:80,706,345...80,717,086 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (PMID:23836881) RGD PMID:23836881 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in ISO
IEA
ISS		 (PMID:18263876)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18263876 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662 		JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 involved_in ISO (PMID:22909820) RGD PMID:22909820 NCBI chr 3:46,254,338...46,347,076
Ensembl chr 3:46,254,330...46,347,076 		JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO
ISS		 (MGI:5293246|PMID:21857671), (MGI:5465398|PMID:22266820)
GO_REF:0000024		 RGD
UniProt		 PMID:21857671 PMID:22266820 GO_REF:0000024 MGI:5293246 MGI:5465398 NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Setmar SET domain and mariner transposase fusion gene involved_in ISO (PMID:16332963), (PMID:18263876), (PMID:21187428), (PMID:24573677) RGD PMID:16332963 PMID:18263876 PMID:21187428 PMID:24573677 NCBI chr 4:141,046,058...141,058,183
Ensembl chr 4:141,046,069...141,058,197 		JBrowse link
G Smarcal1 Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 involved_in ISO (PMID:26089390) RGD PMID:26089390 NCBI chr 9:74,239,718...74,286,156
Ensembl chr 9:74,240,241...74,286,146 		JBrowse link
G Smc5 structural maintenance of chromosomes 5 NOT|involved_in ISO (PMID:16810316) RGD PMID:16810316 NCBI chr 1:220,769,366...220,839,138
Ensembl chr 1:220,769,366...220,839,096 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in ISO (MGI:5476381|PMID:23333305), (MGI:5887194|PMID:20362325)
(PMID:23333306), (PMID:23760478), (PMID:27153538), (PMID:28241136), (PMID:31135337)		 RGD PMID:20362325 PMID:23333305 PMID:23333306 PMID:23760478 PMID:27153538 More... MGI:5476381 MGI:5887194 NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO (MGI:3758502|PMID:14690602) RGD PMID:14690602 MGI:3758502 NCBI chr 1:80,140,495...80,168,705
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (MGI:3758502|PMID:14690602)
MGI:1926771|MGI:3047571|MGI:3641440 (PMID:17713479)
GO_REF:0000033
UniProtKB:P49917 (PMID:12517771), (PMID:15385968), (PMID:17290226), (PMID:25597996), (PMID:25742519), (PMID:25934149), (PMID:26774286), (PMID:27437582), (PMID:28500754), (PMID:9809069)		 RGD
GO_Central		 PMID:9809069 PMID:12517771 PMID:14690602 PMID:15385968 PMID:17290226 More... GO_REF:0000033 MGI:3758502 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in ISO
IBA		 (PMID:20383123), (PMID:26359349)
GO_REF:0000033		 RGD
GO_Central		 PMID:20383123 PMID:26359349 GO_REF:0000033 NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:20383123), (PMID:26359349)
MGI:2179954 (PMID:11751629)
GO_REF:0000033		 RGD
GO_Central		 PMID:11751629 PMID:20383123 PMID:26359349 GO_REF:0000033 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad52 RAD52 homolog, DNA repair protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
double-strand break repair via single-strand annealing, removal of nonhomologous ends term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr10:2,416,259...2,448,364
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Ercc4l1 excision repair cross-complementing rodent repair deficiency, complementation group 4-like 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr10:954,927...983,651
Ensembl chr10:954,977...983,174 		JBrowse link
double-strand break repair via synthesis-dependent strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ercc6l ERCC excision repair 6 like, spindle assembly checkpoint helicase involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr  X:67,245,414...67,261,222
Ensembl chr  X:67,245,414...67,280,756 		JBrowse link
G Ercc6l2 ERCC excision repair 6 like 2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr17:1,076,486...1,311,281
Ensembl chr17:1,216,428...1,310,275 		JBrowse link
G Fancm FA complementation group M involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:83,126,903...83,180,455
Ensembl chr 6:83,127,093...83,180,028 		JBrowse link
G Helq helicase, POLQ-like involved_in ISO (PMID:34937945) RGD PMID:34937945 NCBI chr14:8,818,582...8,862,926
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Rad54b RAD54 homolog B involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 5:25,032,112...25,104,630
Ensembl chr 5:25,032,066...25,104,616 		JBrowse link
G Rad54l RAD54 like involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 5:129,575,431...129,605,100
Ensembl chr 5:129,575,378...129,605,070 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:130,863,405...130,873,765
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
error-free postreplication DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ube2v1 ubiquitin conjugating enzyme E2 V1 acts_upstream_of_or_within ISO SGD:S000003055 (PMID:11406273) RGD PMID:11406273 NCBI chr 3:156,317,339...156,340,198
Ensembl chr 3:156,316,781...156,340,273 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 acts_upstream_of_or_within ISO SGD:S000003055 (PMID:11406273) RGD PMID:11406273 NCBI chr11:85,304,528...85,338,430
Ensembl chr11:85,304,526...85,336,369 		JBrowse link
error-free translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in ISO
IEA
ISS		 (PMID:24191025)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:24191025 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:95,025,462...95,041,559
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 involved_in ISO
IBA		 (PMID:24191025)
GO_REF:0000033		 RGD
GO_Central		 PMID:24191025 GO_REF:0000033 NCBI chr10:63,407,237...63,417,605
Ensembl chr10:63,407,213...63,417,605 		JBrowse link
G Rev1 REV1, DNA directed polymerase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:40,278,100...40,351,764
Ensembl chr 9:40,278,101...40,351,576 		JBrowse link
error-prone translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:24449906) RGD PMID:24449906 NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
G Pold2 DNA polymerase delta 2, accessory subunit involved_in ISO
IEA		 (PMID:24449906)
GO_REF:0000107		 RGD
Ensembl		 PMID:24449906 GO_REF:0000107 NCBI chr14:80,748,971...80,755,188
Ensembl chr14:80,748,974...80,755,160 		JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit involved_in ISO (PMID:24449906) RGD PMID:24449906 NCBI chr 1:154,417,893...154,456,687
Ensembl chr 1:154,418,084...154,456,665 		JBrowse link
G Pole2 DNA polymerase epsilon 2, accessory subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:87,674,702...87,712,723
Ensembl chr 6:87,674,702...87,699,305 		JBrowse link
G Polh DNA polymerase eta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:14,778,355...14,813,210
Ensembl chr 9:14,777,888...14,812,723 		JBrowse link
G Polk DNA polymerase kappa involved_in ISO
IBA		 (PMID:28297716)
GO_REF:0000033		 RGD
GO_Central		 PMID:28297716 GO_REF:0000033 NCBI chr 2:27,822,228...27,882,331
Ensembl chr 2:27,822,679...27,882,313 		JBrowse link
G Polq DNA polymerase theta involved_in ISO (PMID:30655289) RGD PMID:30655289 NCBI chr11:63,673,796...63,775,905
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Primpol primase and DNA directed polymerase involved_in ISO (PMID:24682820), (PMID:25746449), (PMID:28534480) RGD PMID:24682820 PMID:25746449 PMID:28534480 NCBI chr16:45,681,252...45,715,758
Ensembl chr16:45,681,326...45,715,565 		JBrowse link
G Rev1 REV1, DNA directed polymerase involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:11711549)		 GO_Central
RGD		 PMID:11711549 GO_REF:0000033 NCBI chr 9:40,278,100...40,351,764
Ensembl chr 9:40,278,101...40,351,576 		JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit involved_in ISO
IBA		 (PMID:24449906)
GO_REF:0000033		 RGD
GO_Central		 PMID:24449906 GO_REF:0000033 NCBI chr20:43,131,841...43,290,102
Ensembl chr20:43,132,363...43,290,099 		JBrowse link
interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenps centromere protein S involved_in ISO (PMID:20347429) RGD PMID:20347429 NCBI chr 5:159,563,917...159,573,534 JBrowse link
G Cenpx centromere protein X involved_in ISO (PMID:20347429) RGD PMID:20347429 NCBI chr10:105,991,469...105,994,310 JBrowse link
G Dclre1a DNA cross-link repair 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:255,569,911...255,589,815
Ensembl chr 1:255,569,919...255,589,678 		JBrowse link
G Dclre1b DNA cross-link repair 1B involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
GO_REF:0000118
(PMID:20479256)		 Ensembl
GO_Central
TreeGrafter
RGD		 PMID:20479256 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:191,309,909...191,318,399
Ensembl chr 2:191,309,913...191,318,423 		JBrowse link
G Dclre1c DNA cross-link repair 1C involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr17:74,775,828...74,810,089
Ensembl chr17:74,776,935...74,809,186 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO (PMID:23637614) RGD PMID:23637614 NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc6l2 ERCC excision repair 6 like 2 involved_in ISO (PMID:24507776) RGD PMID:24507776 NCBI chr17:1,076,486...1,311,281
Ensembl chr17:1,216,428...1,310,275 		JBrowse link
G Exo5 exonuclease 5 involved_in ISO
IBA		 (PMID:23095756)
GO_REF:0000033		 RGD
GO_Central		 PMID:23095756 GO_REF:0000033 NCBI chr 5:134,494,440...134,497,757
Ensembl chr 5:134,493,829...134,497,772 		JBrowse link
G Faap100 FA core complex associated protein 100 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:105,641,677...105,653,809
Ensembl chr10:105,639,414...105,653,494 		JBrowse link
G Faap20 FA core complex associated protein 20 involved_in ISO
ISS		 (PMID:22266823), (PMID:22396592), (PMID:22705371)
GO_REF:0000024		 RGD
UniProt		 PMID:22266823 PMID:22396592 PMID:22705371 GO_REF:0000024 NCBI chr 5:165,808,370...165,815,291
Ensembl chr 5:165,808,657...165,815,333 		JBrowse link
G Faap24 FA core complex associated protein 24 involved_in ISO (PMID:20347429) RGD PMID:20347429 NCBI chr 1:88,051,523...88,057,997
Ensembl chr 1:88,051,911...88,057,989 		JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 involved_in ISO
IBA		 (PMID:25430771)
GO_REF:0000033		 RGD
GO_Central		 PMID:25430771 GO_REF:0000033 NCBI chr 1:117,915,323...117,945,044
Ensembl chr 1:117,917,099...117,944,977 		JBrowse link
G Fanca FA complementation group A involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:51,304,126...51,362,586
Ensembl chr19:51,304,021...51,362,527 		JBrowse link
G Fancb FA complementation group B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:29,403,771...29,420,484
Ensembl chr  X:29,403,771...29,420,192 		JBrowse link
G Fancc FA complementation group C involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:1,680,660...1,822,610
Ensembl chr17:1,681,324...1,829,376 		JBrowse link
G Fancd2 FA complementation group D2 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:146,679,014...146,743,422
Ensembl chr 4:146,679,179...146,743,412 		JBrowse link
G Fance FA complementation group E involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:6,369,416...6,386,631
Ensembl chr20:6,375,573...6,386,631 		JBrowse link
G Fancf FA complementation group F involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:101,449,120...101,451,936
Ensembl chr 1:101,450,389...101,451,923 		JBrowse link
G Fancg FA complementation group G involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:57,230,287...57,240,067
Ensembl chr 5:57,231,685...57,240,029 		JBrowse link
G Fancl FA complementation group L involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:100,249,733...100,317,958
Ensembl chr14:100,248,875...100,314,255 		JBrowse link
G Fancm FA complementation group M involved_in ISO
IBA		 (PMID:20347429)
GO_REF:0000033		 RGD
GO_Central		 PMID:20347429 GO_REF:0000033 NCBI chr 6:83,126,903...83,180,455
Ensembl chr 6:83,127,093...83,180,028 		JBrowse link
G Firrm FIGNL1 interacting regulator of recombination and mitosis involved_in ISO
ISS		 (PMID:37256941)
GO_REF:0000024		 RGD
UniProt		 PMID:37256941 GO_REF:0000024 NCBI chr13:76,301,914...76,345,842
Ensembl chr13:76,301,918...76,345,804 		JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in ISS
ISO		 GO_REF:0000024
(PMID:33321094), (PMID:36608669), (PMID:37519246), (PMID:37950866)		 UniProt
RGD		 PMID:33321094 PMID:36608669 PMID:37519246 PMID:37950866 GO_REF:0000024 NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Hrob homologous recombination factor with OB-fold involved_in ISO
IEA
ISS		 (PMID:31467087)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:31467087 GO_REF:0000024 GO_REF:0000107 NCBI chr10:87,206,017...87,222,483
Ensembl chr10:87,206,049...87,222,483 		JBrowse link
G LOC120093168 nuclear ubiquitous casein and cyclin-dependent kinase substrate 1-like involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 6:136,594,866...136,595,965
Ensembl chr 6:136,594,855...136,596,600 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO
IEA
IBA		 (PMID:26323318)
GO_REF:0000118
GO_REF:0000033		 RGD
TreeGrafter
GO_Central		 PMID:26323318 GO_REF:0000033 GO_REF:0000118 NCBI chr13:43,345,091...43,374,316
Ensembl chr13:43,345,115...43,370,229 		JBrowse link
G Poln DNA polymerase nu involved_in ISO (PMID:19908865), (PMID:19995904) RGD PMID:19908865 PMID:19995904 NCBI chr14:76,579,983...76,752,460
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:26253028) RGD PMID:26253028 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO
IBA		 (PMID:26323318)
GO_REF:0000033		 RGD
GO_Central		 PMID:26323318 GO_REF:0000033 NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rad51d RAD51 paralog D acts_upstream_of_or_within ISO MGI:2386281 (PMID:15781618) RGD PMID:15781618 NCBI chr10:67,805,720...67,824,452
Ensembl chr10:67,740,712...67,824,434 		JBrowse link
G Rfwd3 ring finger and WD repeat domain 3 involved_in ISO (PMID:28575657), (PMID:28575658), (PMID:33321094) RGD PMID:28575657 PMID:28575658 PMID:33321094 NCBI chr19:39,235,883...39,268,479
Ensembl chr19:39,236,787...39,268,479 		JBrowse link
G Sprtn SprT-like N-terminal domain involved_in ISO (PMID:36608669) RGD PMID:36608669 NCBI chr19:52,857,612...52,864,864
Ensembl chr19:52,857,866...52,864,864 		JBrowse link
G Vcp valosin-containing protein involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Xrcc3 X-ray repair cross complementing 3 involved_in ISO (PMID:26323318) RGD PMID:26323318 NCBI chr 6:130,863,405...130,873,765
Ensembl chr 6:130,863,959...130,872,444 		JBrowse link
intrinsic apoptotic signaling pathway in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07071210.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 8:97,646,513...97,647,024 JBrowse link
G Atad5 ATPase family, AAA domain containing 5 acts_upstream_of_or_within ISO MGI:1328356|MGI:88138 (PMID:15983387) RGD PMID:15983387 NCBI chr10:65,070,682...65,118,489
Ensembl chr10:65,070,689...65,117,845 		JBrowse link
G Atm ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:109337|MGI:1933746 (PMID:11040211), (PMID:16777961), (PMID:17476307)		 GO_Central
RGD		 PMID:11040211 PMID:16777961 PMID:17476307 GO_REF:0000033 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Bad BCL2-associated agonist of cell death involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3029528 (PMID:12431371), (PMID:15231831)		 Ensembl
RGD		 PMID:12431371 PMID:15231831 GO_REF:0000107 NCBI chr 1:204,133,502...204,142,829
Ensembl chr 1:204,131,501...204,142,823 		JBrowse link
G Bak1 BCL2-antagonist/killer 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1197519|MGI:99702 (PMID:15901672), (PMID:15967824)		 GO_Central
RGD		 PMID:15901672 PMID:15967824 GO_REF:0000033 NCBI chr20:5,100,480...5,109,669
Ensembl chr20:5,100,480...5,109,264 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISS
ISO
IBA		 GO_REF:0000118
GO_REF:0000024
(PMID:11912183)
MGI:1097161|MGI:1197519|MGI:1857429 (PMID:12952892), (PMID:15901672), (PMID:15967824)
GO_REF:0000033		 TreeGrafter
UniProt
RGD
GO_Central		 PMID:11912183 PMID:12952892 PMID:15901672 PMID:15967824 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Bax-ps1 BCL2 associated X, apoptosis regulator, pseudogene 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 8:97,646,510...97,647,102 JBrowse link
G Bax-ps2 BCL2-associated X protein, pseudogene 2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr10:86,524,658...86,533,056
Ensembl chr10:86,532,281...86,532,859 		JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:2442925 (PMID:15983387)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:15983387 GO_REF:0000033 GO_REF:0000107 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Bcl2a1 BCL2-related protein A1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:89,716,914...89,724,998
Ensembl chr 8:89,716,914...89,724,998 		JBrowse link
G Bcl2l1 Bcl2-like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000118
MGI:2158303 (PMID:14517295)
GO_REF:0000033		 TreeGrafter
RGD
GO_Central		 PMID:14517295 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479 		JBrowse link
G Bcl2l10 Bcl2-like 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:76,107,326...76,113,373
Ensembl chr 8:76,107,326...76,113,367 		JBrowse link
G Bcl2l11 Bcl2-like 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11546872)
MGI:1097161|MGI:99702 (PMID:15967824)
GO_REF:0000107		 RGD
Ensembl		 PMID:11546872 PMID:15967824 GO_REF:0000107 NCBI chr 3:115,366,783...115,404,068
Ensembl chr 3:115,366,646...115,404,068 		JBrowse link
G Bcl2l2 Bcl2-like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:28,346,449...28,361,627
Ensembl chr15:28,356,807...28,361,624 		JBrowse link
G Bok BCL2 family apoptosis regulator BOK involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:94,223,493...94,234,476
Ensembl chr 9:94,223,389...94,234,476 		JBrowse link
G Brca1 BRCA1, DNA repair associated acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14654789)
GO_REF:0000107		 RGD
Ensembl		 PMID:14654789 GO_REF:0000107 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brca2 BRCA2, DNA repair associated acts_upstream_of_or_within ISO MGI:107202 (PMID:17476307) RGD PMID:17476307 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567 		JBrowse link
G Casp2 caspase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:71,149,632...71,167,388
Ensembl chr 4:71,149,669...71,167,379 		JBrowse link
G Casp9 caspase 9 involved_in ISO
IBA		 (PMID:15657060)
GO_REF:0000033		 RGD
GO_Central		 PMID:15657060 GO_REF:0000033 NCBI chr 5:154,108,872...154,126,628
Ensembl chr 5:154,109,046...154,126,626 		JBrowse link
G Casp9_v1 caspase-9-carboxyl-terminal divergent involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Chek2 checkpoint kinase 2 involved_in ISO (PMID:12402044), (PMID:12717439), (PMID:18644861) RGD PMID:12402044 PMID:12717439 PMID:18644861 NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286 		JBrowse link
G Crip1 cysteine rich protein 1 involved_in ISS
IEA
IBA
ISO		 PMID:20415737
GO_REF:0000118
GO_REF:0000033
(PMID:20415737)		 TreeGrafter
GO_Central
RGD		 PMID:20415737 PMID:20415737 GO_REF:0000033 GO_REF:0000118, RGD:8553326 NCBI chr 6:132,226,746...132,234,620
Ensembl chr 6:132,226,746...132,234,620 		JBrowse link
G E2f1 E2F transcription factor 1 involved_in ISO
IEA
ISS		 (PMID:12717439)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:12717439 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361 		JBrowse link
G Ei24 EI24, autophagy associated transmembrane protein acts_upstream_of_or_within ISO (PMID:10594026) RGD PMID:10594026 NCBI chr 8:36,494,289...36,510,653
Ensembl chr 8:36,494,289...36,510,571 		JBrowse link
G ENSRNOG00000064151 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 3:138,869,480...138,870,482 JBrowse link
G ENSRNOG00000070080 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 3:138,335,033...138,336,404 JBrowse link
G Epha2 Eph receptor A2 involved_in ISO (PMID:18339848) RGD PMID:18339848 NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO MGI:1932102 (PMID:11005836) RGD PMID:11005836 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Fnip2 folliculin interacting protein 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5284752|PMID:19137017)		 UniProt
RGD		 PMID:19137017 GO_REF:0000024 MGI:5284752 NCBI chr 2:164,596,557...164,708,147
Ensembl chr 2:164,598,906...164,707,901 		JBrowse link
G Hic1 HIC ZBTB transcriptional repressor 1 involved_in ISO (PMID:16269335)
(MGI:5297787|PMID:16269335)		 RGD PMID:16269335 MGI:5297787 NCBI chr10:60,014,520...60,019,475
Ensembl chr10:60,011,528...60,019,475 		JBrowse link
G Hmox1 heme oxygenase 1 IDA RGD PMID:11854317 RGD:625692 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079 		JBrowse link
G Htra2 HtrA serine peptidase 2 involved_in ISO (PMID:11602612) RGD PMID:11602612 NCBI chr 4:115,556,914...115,560,202
Ensembl chr 4:115,556,916...115,560,095 		JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within ISO (PMID:11753682) RGD PMID:11753682 NCBI chr20:2,928,378...2,929,582
Ensembl chr20:2,928,378...2,929,583 		JBrowse link
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in ISO (PMID:20188669) RGD PMID:20188669 NCBI chr13:42,712,154...42,738,470
Ensembl chr13:42,712,159...42,737,143 		JBrowse link
G Mael maelstrom spermatogenic transposon silencer acts_upstream_of_or_within ISO MGI:3795667 (PMID:18694567) RGD PMID:18694567 NCBI chr13:78,457,073...78,496,657
Ensembl chr13:78,457,073...78,496,657 		JBrowse link
G Mbd4 methyl-CpG binding domain 4 DNA glycosylase acts_upstream_of_or_within ISO MGI:2183491 (PMID:14562041) RGD PMID:14562041 NCBI chr 4:148,893,049...148,904,833
Ensembl chr 4:148,894,280...148,904,982 		JBrowse link
G Mcl1 MCL1 apoptosis regulator, BCL2 family member involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:15901672)		 GO_Central
RGD		 PMID:15901672 GO_REF:0000033 NCBI chr 2:183,219,137...183,235,676
Ensembl chr 2:183,219,220...183,222,303 		JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857946 (PMID:14562041)		 Ensembl
RGD		 PMID:14562041 GO_REF:0000107 NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Moap1 modulator of apoptosis 1 involved_in ISO (PMID:16199525) RGD PMID:16199525 NCBI chr 6:121,882,565...121,884,500
Ensembl chr 6:121,882,366...121,898,643 		JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within ISO MGI:1858055|MGI:2680817 (PMID:10097137), (PMID:14744764) RGD PMID:10097137 PMID:14744764 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh6 mutS homolog 6 acts_upstream_of_or_within ISO MGI:1858014 (PMID:15324697) RGD PMID:15324697 NCBI chr 6:6,562,631...6,579,995
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO MGI:2447604 (PMID:14517295) RGD PMID:14517295 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 acts_upstream_of_or_within ISO MGI:97583 (PMID:17242187) RGD PMID:17242187 NCBI chr15:29,286,998...29,314,610
Ensembl chr15:29,305,535...29,314,610 		JBrowse link
G Pcbp4 poly(rC) binding protein 4 involved_in ISO (PMID:10891498) RGD PMID:10891498 NCBI chr 8:107,092,688...107,103,276
Ensembl chr 8:107,093,013...107,103,276 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104798|MGI:2149414 (PMID:17242187)		 Ensembl
RGD		 PMID:17242187 GO_REF:0000107 NCBI chr 2:32,878,942...32,963,668
Ensembl chr 2:32,882,032...32,963,631 		JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 acts_upstream_of_or_within ISO MGI:2678372 (PMID:12952892) RGD PMID:12952892 NCBI chr18:59,986,020...59,992,434
Ensembl chr18:59,986,017...59,992,429 		JBrowse link
G Pml PML nuclear body scaffold involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:12402044)
MGI:104662|MGI:2429949 (PMID:15626733), (PMID:9806545)
GO_REF:0000033		 RGD
GO_Central		 PMID:9806545 PMID:12402044 PMID:15626733 GO_REF:0000033 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Polb DNA polymerase beta acts_upstream_of_or_within ISO (PMID:10197627) RGD PMID:10197627 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1857113 (PMID:12604618)		 GO_Central
RGD		 PMID:12604618 GO_REF:0000033 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Rad9a RAD9 checkpoint clamp component A acts_upstream_of ISO MGI:2442925 (PMID:15983387) RGD PMID:15983387 NCBI chr 1:201,488,511...201,553,582
Ensembl chr 1:201,487,136...201,553,608 		JBrowse link
G Sfn stratifin involved_in ISO (PMID:11574543) RGD PMID:11574543 NCBI chr 5:145,826,722...145,827,994
Ensembl chr 5:145,826,201...145,831,314 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO
IEA		 (MGI:5297787|PMID:16269335)
GO_REF:0000107		 RGD
Ensembl		 PMID:16269335 GO_REF:0000107 MGI:5297787 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Skil SKI-like proto-oncogene acts_upstream_of ISO MGI:2387096 (PMID:10811619) RGD PMID:10811619 NCBI chr 2:112,247,047...112,275,176
Ensembl chr 2:112,247,051...112,275,080 		JBrowse link
G Sod2 superoxide dismutase 2 acts_upstream_of_or_within ISO MGI:1857480 (PMID:15642323) RGD PMID:15642323 NCBI chr 1:47,638,318...47,645,163
Ensembl chr 1:47,636,528...47,645,189 		JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within ISO (PMID:17242187) RGD PMID:17242187 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A acts_upstream_of_or_within ISO (PMID:17242187) RGD PMID:17242187 NCBI chr 4:158,150,815...158,163,592
Ensembl chr 4:158,150,820...158,163,591 		JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000118
(PMID:17242187)
GO_REF:0000033		 TreeGrafter
RGD
GO_Central		 PMID:17242187 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:157,070,642...157,104,216
Ensembl chr 5:157,070,642...157,104,206 		JBrowse link
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase involved_in ISO (PMID:20188669) RGD PMID:20188669 NCBI chr 5:55,388,033...55,399,937
Ensembl chr 5:55,387,632...55,399,937 		JBrowse link
G Uaca uveal autoantigen with coiled-coil domains and ankyrin repeats acts_upstream_of_or_within ISO MGI:3043446 (PMID:15271982) RGD PMID:15271982 NCBI chr 8:61,259,415...61,347,789
Ensembl chr 8:61,259,477...61,347,789 		JBrowse link
G Usp47 ubiquitin specific peptidase 47 acts_upstream_of ISO MGI:4130032 (PMID:19966869) RGD PMID:19966869 NCBI chr 1:166,152,104...166,235,312
Ensembl chr 1:166,152,199...166,235,312 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor acts_upstream_of_or_within ISO MGI:1857939 (PMID:11005836) RGD PMID:11005836 NCBI chr 5:60,431,673...60,475,726
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aen apoptosis enhancing nuclease involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:18264133)		 UniProt
GO_Central
RGD		 PMID:18264133 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:132,815,094...132,824,522
Ensembl chr 1:132,815,142...132,824,523 		JBrowse link
G Atad5 ATPase family, AAA domain containing 5 acts_upstream_of_or_within ISO MGI:1336991|MGI:98834 (PMID:15983387) RGD PMID:15983387 NCBI chr10:65,070,682...65,118,489
Ensembl chr10:65,070,689...65,117,845 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:17403783)		 UniProt
Ensembl
RGD		 PMID:17403783 GO_REF:0000024 GO_REF:0000107 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657 		JBrowse link
G Bbc3 Bcl-2 binding component 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2681654 (PMID:16151013)		 Ensembl
RGD		 PMID:16151013 GO_REF:0000107 NCBI chr 1:77,013,281...77,022,509
Ensembl chr 1:77,014,543...77,022,509 		JBrowse link
G Bcl3 BCL3, transcription coactivator acts_upstream_of_or_within ISO (PMID:16384933) RGD PMID:16384933 NCBI chr 1:79,471,368...79,485,908
Ensembl chr 1:79,471,369...79,485,607 		JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2429691|MGI:3052655|MGI:98834 (PMID:15735671), (PMID:17476307)		 Ensembl
RGD		 PMID:15735671 PMID:17476307 GO_REF:0000107 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567 		JBrowse link
G Cdip1 cell death-inducing p53 target 1 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:17599062)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:17599062 GO_REF:0000033 GO_REF:0000107 NCBI chr10:10,773,538...10,796,979
Ensembl chr10:10,774,705...10,796,980 		JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A acts_upstream_of_or_within ISO MGI:1933751 (PMID:12952892) RGD PMID:12952892 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585 		JBrowse link
G Chek2 checkpoint kinase 2 acts_upstream_of_or_within ISO MGI:2386905 (PMID:10710310) RGD PMID:10710310 NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286 		JBrowse link
G Ddit4 DNA-damage-inducible transcript 4 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5298149|PMID:21896779)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:21896779 GO_REF:0000024 GO_REF:0000107 MGI:5298149 NCBI chr20:27,891,989...27,894,088
Ensembl chr20:27,891,998...27,894,105 		JBrowse link
G Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 involved_in ISO (PMID:17349958) RGD PMID:17349958 NCBI chr 7:54,348,724...54,381,363
Ensembl chr 7:54,349,610...54,380,106 		JBrowse link
G Ell3 elongation factor for RNA polymerase II 3 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
(PMID:22768269)		 Ensembl
RGD		 PMID:22768269 GO_REF:0000107 NCBI chr 3:108,413,035...108,417,181
Ensembl chr 3:108,410,448...108,417,132 		JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:17403783) RGD PMID:17403783 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:1314872|MGI:98834 (PMID:16537918)
GO_REF:0000033
GO_REF:0000118		 Ensembl
RGD
GO_Central
TreeGrafter		 PMID:16537918 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:191,248,817...191,299,787
Ensembl chr 2:191,248,817...191,298,902 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 acts_upstream_of_or_within ISO MGI:1314872|MGI:98834 (PMID:16537918) RGD PMID:16537918 NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:98834 (PMID:10097137)		 Ensembl
RGD		 PMID:10097137 GO_REF:0000107 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator acts_upstream_of_or_within ISO MGI:3784016 (PMID:11896600) RGD PMID:11896600 NCBI chr 1:181,213,292...181,215,327
Ensembl chr 1:181,213,368...181,215,281 		JBrowse link
G Phlda3 pleckstrin homology-like domain, family A, member 3 involved_in ISO
IBA
ISS		 (PMID:19203586)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:19203586 GO_REF:0000024 GO_REF:0000033 NCBI chr13:47,193,250...47,196,335
Ensembl chr13:47,193,086...47,196,335 		JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:10807576)		 Ensembl
RGD		 PMID:10807576 GO_REF:0000107 NCBI chr18:59,986,020...59,992,434
Ensembl chr18:59,986,017...59,992,429 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (MGI:3580934|PMID:15626733) RGD PMID:15626733 MGI:3580934 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Ppp2r5c protein phosphatase 2, regulatory subunit B', gamma involved_in ISO (PMID:17245430) RGD PMID:17245430 NCBI chr 6:129,461,689...129,598,344
Ensembl chr 6:129,461,648...129,598,346 		JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO (PMID:14730312) RGD PMID:14730312 NCBI chr 1:182,601,657...182,603,013
Ensembl chr 1:182,601,174...182,602,955 		JBrowse link
G Rps27l ribosomal protein S27-like involved_in ISO (PMID:17057733), (PMID:18056458) RGD PMID:17057733 PMID:18056458 NCBI chr 8:67,562,483...67,567,418
Ensembl chr 8:67,562,483...67,567,418 		JBrowse link
G Shisa5 shisa family member 5 acts_upstream_of_or_within ISO (PMID:12135983) RGD PMID:12135983 NCBI chr 8:109,691,504...109,706,411
Ensembl chr 8:109,691,522...109,706,408 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:20100829) RGD PMID:20100829 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:21460037) RGD PMID:21460037 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536 		JBrowse link
G Tmem109 transmembrane protein 109 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:4453832 (PMID:20060811)
GO_REF:0000033
GO_REF:0000118		 Ensembl
RGD
GO_Central
TreeGrafter		 PMID:20060811 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:207,519,628...207,530,245
Ensembl chr 1:207,519,624...207,530,215 		JBrowse link
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase acts_upstream_of_or_within ISO (PMID:15735665) RGD PMID:15735665 NCBI chr 5:55,388,033...55,399,937
Ensembl chr 5:55,387,632...55,399,937 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:4944151|PMID:20818388), (MGI:5882892|PMID:16213212)
MGI:109337|MGI:1096393|MGI:1336991|MGI:1857263|MGI:1926340|MGI:2442925 (PMID:12135983), (PMID:12952892), (PMID:15983387), (PMID:16286009), (PMID:16777961), (PMID:17476307)
GO_REF:0000107
(PMID:14654789), (PMID:14744935)
(PMID:16213212), (PMID:17403783)		 RGD
Ensembl		 PMID:12135983 PMID:12952892 PMID:14654789 PMID:14744935 PMID:15983387 More... GO_REF:0000107 MGI:4944151 MGI:5882892 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:1934269 (PMID:17122775) RGD PMID:17122775 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398 		JBrowse link
G Tp73 tumor protein p73 involved_in
acts_upstream_of		 ISO (PMID:18174154), (PMID:19490146)
MGI:2442925|MGI:98834 (PMID:15983387)		 RGD PMID:15983387 PMID:18174154 PMID:19490146 NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128 		JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in ISO
ISS		 (PMID:16901786)
GO_REF:0000024		 RGD
UniProt		 PMID:16901786 GO_REF:0000024 NCBI chr 8:49,325,766...49,386,229
Ensembl chr 8:49,325,867...49,386,229 		JBrowse link
late meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcmdc2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO MGI:2178050|MGI:5511194 (PMID:27760146) RGD PMID:27760146 NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
meiotic DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spo11 SPO11 initiator of meiotic double strand breaks involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:161,755,299...161,770,930
Ensembl chr 3:161,757,519...161,770,925 		JBrowse link
meiotic DNA double-strand break processing involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting helicase 1 acts_upstream_of_or_within ISO MGI:4129733 (PMID:26490168) RGD PMID:26490168 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Six6os1 Six6 opposite strand transcript 1 involved_in ISO
IBA		 (MGI:5822939|PMID:27796301)
GO_REF:0000033		 RGD
GO_Central		 PMID:27796301 GO_REF:0000033 MGI:5822939 NCBI chr 6:91,579,185...91,615,183
Ensembl chr 6:91,579,325...91,615,148 		JBrowse link
meiotic DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad51c RAD51 paralog C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:72,205,032...72,231,643
Ensembl chr10:72,205,032...72,231,248 		JBrowse link
meiotic DNA recombinase assembly involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Swi5 SWI5 homologous recombination repair protein involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 3:15,574,687...15,583,760
Ensembl chr 3:15,564,715...15,583,805 		JBrowse link
meiotic DNA repair synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spata22 spermatogenesis associated 22 acts_upstream_of_or_within ISO MGI:5314540 (PMID:22011390) RGD PMID:22011390 NCBI chr10:57,945,272...57,963,081
Ensembl chr10:57,932,187...57,963,081 		JBrowse link
G Sycp1 synaptonemal complex protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:109542|MGI:3580000 (PMID:22164254)
GO_REF:0000118
GO_REF:0000033		 Ensembl
RGD
TreeGrafter
GO_Central		 PMID:22164254 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:190,296,688...190,456,687
Ensembl chr 2:190,296,954...190,456,737 		JBrowse link
G Sycp3 synaptonemal complex protein 3 acts_upstream_of_or_within ISO MGI:105931|MGI:1913904 (PMID:22164254) RGD PMID:22164254 NCBI chr 7:22,874,055...22,888,512
Ensembl chr 7:22,874,055...22,888,511 		JBrowse link
G Tex12 testis expressed 12 acts_upstream_of_or_within ISO MGI:109542|MGI:3811722 (PMID:22164254) RGD PMID:22164254 NCBI chr 8:50,908,161...50,913,202
Ensembl chr 8:50,909,052...50,913,217 		JBrowse link
meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcmdc2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO MGI:2178050|MGI:5511194 (PMID:27760146) RGD PMID:27760146 NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exo1 exonuclease 1 involved_in ISO
IBA		 UniProtKB:P43246 (PMID:11809771), (PMID:14636568), (PMID:9788596)
GO_REF:0000033		 RGD
GO_Central		 PMID:9788596 PMID:11809771 PMID:14636568 GO_REF:0000033 NCBI chr13:87,809,725...87,834,654
Ensembl chr13:87,809,810...87,834,654 		JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000002
MGI:1857946|MGI:1858054|MGI:1930998 (PMID:10096563), (PMID:10359802), (PMID:10429667), (PMID:10657972), (PMID:10747038), (PMID:10851078), (PMID:11313994), (PMID:16204034), (PMID:16728433), (PMID:8674118), (PMID:9500552), (PMID:9560238)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
UniProtKB:P43246|UniProtKB:P52701 (PMID:23603115)		 InterPro
RGD
TreeGrafter
GO_Central
Ensembl		 PMID:8674118 PMID:9500552 PMID:9560238 PMID:10096563 PMID:10359802 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Mlh3 mutL homolog 3 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:104288|MGI:2384218 (PMID:16204034)		 GO_Central
RGD		 PMID:16204034 GO_REF:0000033 NCBI chr 6:104,881,483...104,917,686
Ensembl chr 6:104,881,483...104,917,728 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000104
MGI:109519|MGI:1857940|MGI:1858055|MGI:2151801|MGI:2389314|MGI:2680817 (PMID:10581038), (PMID:10874005), (PMID:10992298), (PMID:11046134), (PMID:11890935), (PMID:12531017), (PMID:14744764), (PMID:16728433), (PMID:17331550), (PMID:23071719), (PMID:7628020), (PMID:8706033), (PMID:9157971), (PMID:9244348), (PMID:9288110), (PMID:9697842)
GO_REF:0000033
(PMID:7923193), (PMID:9677427)
UniProtKB:P40692|UniProtKB:P52701 (PMID:11555625), (PMID:23603115)		 UniProt
RGD
GO_Central		 PMID:7628020 PMID:7923193 PMID:8706033 PMID:9157971 PMID:9244348 More... GO_REF:0000033 GO_REF:0000104 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Msh3 mutS homolog 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:8782829), (PMID:9677427)
MGI:101816|MGI:1343961|MGI:1858056|MGI:88039 (PMID:10706084), (PMID:11691815), (PMID:16728433)		 RGD PMID:8782829 PMID:9677427 PMID:10706084 PMID:11691815 PMID:16728433 NCBI chr 2:23,444,326...23,585,777 JBrowse link
G Msh4 mutS homolog 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:242,785,392...242,844,609
Ensembl chr 2:242,792,661...242,843,487 		JBrowse link
G Msh5 mutS homolog 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:3,773,867...3,793,337
Ensembl chr20:3,776,942...3,793,336 		JBrowse link
G Msh6 mutS homolog 6 involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP		 (PMID:10871409), (PMID:23622243), (PMID:8782829)
MGI:109519|MGI:1858014|MGI:2151803|MGI:3653701|MGI:88039 (PMID:11691815), (PMID:12370835), (PMID:15324697), (PMID:16728433), (PMID:23071719), (PMID:9390556)
GO_REF:0000033
UniProtKB:P40692|UniProtKB:P43246 (PMID:23603115)		 RGD
GO_Central		 PMID:8782829 PMID:9390556 PMID:10871409 PMID:11691815 PMID:12370835 More... GO_REF:0000033, RGD:2292505 NCBI chr 6:6,562,631...6,579,995
Ensembl chr 6:6,562,632...6,579,956 		JBrowse link
G Mutyh mutY DNA glycosylase involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:130,274,034...130,286,149
Ensembl chr 5:130,274,122...130,286,146 		JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO
IBA		 (PMID:11005803)
GO_REF:0000033		 RGD
GO_Central		 PMID:11005803 GO_REF:0000033 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Pms1 PMS1 homolog 1, mismatch repair system component involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1857948 (PMID:9500552)		 GO_Central
RGD		 PMID:9500552 GO_REF:0000033 NCBI chr 9:48,229,403...48,340,237
Ensembl chr 9:48,253,410...48,340,237 		JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:10871409), (PMID:23709753), (PMID:9618520)
MGI:1353455|MGI:1857946|MGI:1857947 (PMID:10359802), (PMID:10429667), (PMID:11313994), (PMID:16204034), (PMID:16728433), (PMID:23071719), (PMID:9500552)
GO_REF:0000033		 RGD
GO_Central		 PMID:9500552 PMID:9618520 PMID:10359802 PMID:10429667 PMID:10871409 More... GO_REF:0000033 NCBI chr12:10,676,818...10,701,161
Ensembl chr12:10,676,764...10,701,066 		JBrowse link
G Rnaseh2a ribonuclease H2, subunit A acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:23603115)
GO_REF:0000033		 RGD
GO_Central		 PMID:23603115 GO_REF:0000033 NCBI chr19:23,186,325...23,196,045
Ensembl chr19:23,186,383...23,196,041 		JBrowse link
G Rpa1 replication protein A1 involved_in ISO (PMID:9430682) RGD PMID:9430682 NCBI chr10:60,148,869...60,199,970
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:9430682)		 UniProt
RGD		 PMID:9430682 GO_REF:0000024 NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rpa3 replication protein A3 involved_in ISO
IBA		 (PMID:9430682)
GO_REF:0000033		 RGD
GO_Central		 PMID:9430682 GO_REF:0000033 NCBI chr 4:36,304,649...36,307,755
Ensembl chr 4:36,304,651...36,307,709 		JBrowse link
G Rpa3l1 replication protein A3 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:45,908,653...45,909,063
Ensembl chr12:45,908,683...45,909,048 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in ISO (PMID:23622243) RGD PMID:23622243 NCBI chr 8:110,511,808...110,597,475
Ensembl chr 8:110,511,772...110,597,489 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:123,993,670...124,020,922
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in ISO
IEA		 (PMID:26300262)
GO_REF:0000107
(MGI:5705200|PMID:26300262)		 RGD
Ensembl		 PMID:26300262 GO_REF:0000107 MGI:5705200 NCBI chr20:32,818,219...32,929,577
Ensembl chr20:32,844,951...32,929,600 		JBrowse link
mitochondrial DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 acts_upstream_of_or_within ISO (PMID:24101517) RGD PMID:24101517 NCBI chr 4:123,968,264...123,977,398
Ensembl chr 4:123,968,265...123,977,414
Ensembl chr 1:123,968,265...123,977,414 		JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Lig3 DNA ligase 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:21390132)
(PMID:21390131), (PMID:21390132)		 RGD PMID:21390131 PMID:21390132 NCBI chr10:67,717,808...67,741,141
Ensembl chr10:67,717,812...67,798,414 		JBrowse link
G Mgme1 mitochondrial genome maintenance exonuclease 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:131,640,770...131,649,933
Ensembl chr 3:131,640,944...131,649,932 		JBrowse link
G Neurl4 neuralized E3 ubiquitin protein ligase 4 acts_upstream_of_or_within ISO MGI:5296072 (PMID:35157000) RGD PMID:35157000 NCBI chr10:54,624,923...54,637,262
Ensembl chr10:54,625,642...54,637,258 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:25378300) RGD PMID:25378300 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Primpol primase and DNA directed polymerase involved_in ISO (MGI:6393030|PMID:29073063) RGD PMID:29073063 MGI:6393030 NCBI chr16:45,681,252...45,715,758
Ensembl chr16:45,681,326...45,715,565 		JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:25,691,474...25,717,558
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3528279 (PMID:24101517)		 Ensembl
RGD		 PMID:24101517 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
mitochondrial double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
mitotic DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc7 cell division cycle 7 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr14:2,804,660...2,824,796
Ensembl chr14:2,804,661...2,824,778 		JBrowse link
G Chek2 checkpoint kinase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286 		JBrowse link
G Stk33 serine/threonine kinase 33 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:163,276,176...163,458,580
Ensembl chr 1:163,276,340...163,458,627 		JBrowse link
G Zfp830 zinc finger protein 830 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3583779 (PMID:23213458)		 GO_Central
RGD		 PMID:23213458 GO_REF:0000033 NCBI chr10:67,701,340...67,702,804
Ensembl chr10:67,701,073...67,704,523 		JBrowse link
mitotic G1 DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnd1 cyclin D1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19412162)		 UniProt
Ensembl
RGD		 PMID:19412162 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:200,089,002...200,098,524
Ensembl chr 1:200,089,002...200,098,602 		JBrowse link
G Dgkz diacylglycerol kinase zeta involved_in ISO UniProtKB:P06400 (PMID:16286473) RGD PMID:16286473 NCBI chr 3:77,904,149...77,946,114
Ensembl chr 3:77,904,150...77,946,099 		JBrowse link
G Fbxo31 F-box protein 31 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19412162)		 UniProt
Ensembl
RGD		 PMID:19412162 GO_REF:0000024 GO_REF:0000107 NCBI chr19:49,624,813...49,656,052
Ensembl chr19:49,627,686...49,656,010 		JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 acts_upstream_of_or_within ISO MGI:4126459 (PMID:19744960) RGD PMID:19744960 NCBI chr 9:88,001,212...88,127,040
Ensembl chr 9:88,001,301...88,125,715 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:21731742) RGD PMID:21731742 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Rfwd3 ring finger and WD repeat domain 3 involved_in ISO (PMID:20173098) RGD PMID:20173098 NCBI chr19:39,235,883...39,268,479
Ensembl chr19:39,236,787...39,268,479 		JBrowse link
G Rpa2 replication protein A2 involved_in ISO (PMID:21731742) RGD PMID:21731742 NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rps27l ribosomal protein S27-like involved_in ISO (PMID:18056458) RGD PMID:18056458 NCBI chr 8:67,562,483...67,567,418
Ensembl chr 8:67,562,483...67,567,418 		JBrowse link
G Sde2 SDE2 telomere maintenance homolog involved_in ISO
IEA		 (PMID:27906959)
GO_REF:0000107		 RGD
Ensembl		 PMID:27906959 GO_REF:0000107 NCBI chr13:92,578,843...92,595,142
Ensembl chr13:92,578,874...92,595,140 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 ISO (PMID:7958916)
(PMID:16107883)		 RGD PMID:7958916 PMID:16107883 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO MGI:3052754 (PMID:18045533), (PMID:23993650) RGD PMID:18045533 PMID:23993650 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in ISO (PMID:21329877) RGD PMID:21329877 NCBI chr17:55,922,686...55,984,286
Ensembl chr17:55,923,123...55,982,301 		JBrowse link
mitotic G2 DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:17525340), (PMID:17643121), (PMID:19261748)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:17525340 PMID:17643121 PMID:19261748 GO_REF:0000024 GO_REF:0000107 NCBI chr14:8,796,281...8,810,625
Ensembl chr14:8,796,266...8,810,622 		JBrowse link
G Atm ATM serine/threonine kinase involved_in ISO (PMID:15149599) RGD PMID:15149599 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:19261746), (PMID:19261748), (PMID:19261749)		 UniProt
GO_Central
RGD		 PMID:19261746 PMID:19261748 PMID:19261749 GO_REF:0000024 GO_REF:0000033 NCBI chr16:18,068,830...18,074,938
Ensembl chr16:18,068,884...18,074,923 		JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000104
(PMID:19261748)		 UniProt
RGD		 PMID:19261748 GO_REF:0000024 GO_REF:0000104 NCBI chr 6:24,369,021...24,788,416
Ensembl chr 6:24,369,022...24,833,951 		JBrowse link
G Blm BLM RecQ like helicase involved_in ISO (PMID:11309417) RGD PMID:11309417 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO
IBA
IEA		 (PMID:17525340), (PMID:17643121), (PMID:19261748)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:17525340 PMID:17643121 PMID:19261748 GO_REF:0000033 GO_REF:0000107 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17525341), (PMID:19261746), (PMID:19261748)		 UniProt
RGD		 PMID:17525341 PMID:19261746 PMID:19261748 GO_REF:0000024 NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080 		JBrowse link
G Brcc3dc BRCA1/BRCA2-containing complex, subunit 3, domain containing involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:44,014,889...44,016,646
Ensembl chr 7:44,005,646...44,016,670 		JBrowse link
G Brsk1 BR serine/threonine kinase 1 involved_in ISO (PMID:15150265) RGD PMID:15150265 NCBI chr 1:69,134,166...69,159,947
Ensembl chr 1:69,134,565...69,160,365 		JBrowse link
G Brsk2 BR serine/threonine kinase 2 involved_in ISS PMID:15150265 UniProt PMID:15150265 RGD:8554801 NCBI chr 1:197,035,505...197,088,624
Ensembl chr 1:197,035,633...197,088,092 		JBrowse link
G C1h10orf90 similar to human chromosome 10 open reading frame 90 involved_in ISO (MGI:4455105|PMID:20154723) RGD PMID:20154723 MGI:4455105 NCBI chr 1:189,059,744...189,293,353
Ensembl chr 1:189,059,746...189,293,435 		JBrowse link
G Ccng1 cyclin G1 IMP RGD PMID:9464250 RGD:2316029 NCBI chr10:25,176,231...25,182,604
Ensembl chr10:25,176,234...25,181,641 		JBrowse link
G Cdc14b cell division cycle 14B involved_in ISO (PMID:18662541) RGD PMID:18662541 NCBI chr17:844,686...934,787
Ensembl chr17:844,685...933,235 		JBrowse link
G Cdk1 cyclin-dependent kinase 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:12937170)		 GO_Central
RGD		 PMID:12937170 GO_REF:0000033 NCBI chr20:19,266,226...19,281,417
Ensembl chr20:19,266,248...19,281,408 		JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in ISO
IEA
ISS		 (PMID:15790566)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:15790566 GO_REF:0000024 GO_REF:0000107 NCBI chr10:81,894,393...81,903,581
Ensembl chr10:81,894,393...81,903,590 		JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A involved_in ISO (PMID:23213251) RGD PMID:23213251 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585 		JBrowse link
G Chek1 checkpoint kinase 1 involved_in ISO (PMID:20932473) RGD PMID:20932473 NCBI chr 8:36,420,565...36,443,477
Ensembl chr 8:36,420,569...36,441,009 		JBrowse link
G Clspn claspin involved_in ISO
IBA		 (PMID:18662541)
GO_REF:0000033		 RGD
GO_Central		 PMID:18662541 GO_REF:0000033 NCBI chr 5:138,850,119...138,885,037
Ensembl chr 5:138,850,128...138,885,034 		JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 involved_in ISO (PMID:37178686) RGD PMID:37178686 NCBI chr 3:77,952,589...77,993,513
Ensembl chr 3:77,952,540...77,993,456 		JBrowse link
G Donson DNA replication fork stabilization factor DONSON involved_in ISO (PMID:28191891) RGD PMID:28191891 NCBI chr11:30,919,834...30,933,150
Ensembl chr11:30,923,239...30,932,889 		JBrowse link
G Dtl denticleless E3 ubiquitin protein ligase homolog involved_in ISO
IBA		 (PMID:17085480)
GO_REF:0000033		 RGD
GO_Central		 PMID:17085480 GO_REF:0000033 NCBI chr13:103,115,810...103,155,029
Ensembl chr13:103,117,186...103,154,890 		JBrowse link
G Foxn3 forkhead box N3 involved_in ISO UniProtKB:P38111 (PMID:9154802) RGD PMID:9154802 NCBI chr 6:118,462,018...118,842,442
Ensembl chr 6:118,466,025...118,842,401 		JBrowse link
G Foxo4 forkhead box O4 acts_upstream_of_or_within ISO (PMID:12048180) RGD PMID:12048180 NCBI chr  X:66,385,241...66,392,115
Ensembl chr  X:66,385,558...66,392,115 		JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 involved_in ISO (PMID:18662541) RGD PMID:18662541 NCBI chr 7:8,332,029...8,343,953
Ensembl chr 7:8,332,029...8,343,952 		JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within ISO MGI:3773690 (PMID:20467439) RGD PMID:20467439 NCBI chr20:2,928,378...2,929,582
Ensembl chr20:2,928,378...2,929,583 		JBrowse link
G Mbd4 methyl-CpG binding domain 4 DNA glycosylase acts_upstream_of_or_within ISO MGI:2684310 (PMID:14614141) RGD PMID:14614141 NCBI chr 4:148,893,049...148,904,833
Ensembl chr 4:148,894,280...148,904,982 		JBrowse link
G Mbtps1 membrane-bound transcription factor peptidase, site 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:37178686)		 Ensembl
RGD		 PMID:37178686 GO_REF:0000107 NCBI chr19:47,561,598...47,612,769
Ensembl chr19:47,561,598...47,612,791 		JBrowse link
G Mbtps2 membrane-bound transcription factor peptidase, site 2 involved_in ISO (PMID:37178686) RGD PMID:37178686 NCBI chr  X:37,410,914...37,461,130
Ensembl chr  X:37,410,811...37,464,430 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:3027036 (PMID:14690604)
GO_REF:0000118
GO_REF:0000033		 Ensembl
RGD
TreeGrafter
GO_Central		 PMID:14690604 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO
IBA		 (PMID:27568553)
GO_REF:0000033		 RGD
GO_Central		 PMID:27568553 GO_REF:0000033 NCBI chr10:34,501,359...34,525,474
Ensembl chr10:34,501,384...34,525,469 		JBrowse link
G Nbn nibrin involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA
ISS		 (PMID:11438675)
MGI:2183796 (PMID:18614044)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000002
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
InterPro
Ensembl
UniProt		 PMID:11438675 PMID:18614044 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:21741933) RGD PMID:21741933 NCBI chr 1:76,629,084...76,636,902
Ensembl chr 1:76,629,069...76,636,902 		JBrowse link
G Plk1 polo-like kinase 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:18662541)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:18662541 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:176,716,420...176,726,400
Ensembl chr 1:176,716,420...176,726,400 		JBrowse link
G Rint1 RAD50 interactor 1 involved_in ISO (PMID:11096100) RGD PMID:11096100 NCBI chr 4:11,319,416...11,355,740
Ensembl chr 4:11,320,955...11,355,736 		JBrowse link
G Rpp21 ribonuclease P/MRP subunit p21 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:2,018,170...2,020,100
Ensembl chr20:2,018,147...2,020,106 		JBrowse link
G Syf2 SYF2 pre-mRNA-splicing factor acts_upstream_of_or_within ISO MGI:3904866 (PMID:22448250) RGD PMID:22448250 NCBI chr 5:147,156,492...147,164,416
Ensembl chr 5:147,156,480...147,164,414 		JBrowse link
G Taok1 TAO kinase 1 involved_in ISO
ISS		 (PMID:17396146)
GO_REF:0000024		 RGD
UniProt		 PMID:17396146 GO_REF:0000024 NCBI chr10:62,373,072...62,465,295
Ensembl chr10:62,381,404...62,465,766 		JBrowse link
G Taok2 TAO kinase 2 involved_in ISO
IEA
ISS		 (PMID:17396146)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:17396146 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:181,475,708...181,494,738
Ensembl chr 1:181,475,711...181,494,613 		JBrowse link
G Taok3 TAO kinase 3 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:17396146)		 Ensembl
UniProt
RGD		 PMID:17396146 GO_REF:0000024 GO_REF:0000107 NCBI chr12:39,312,354...39,473,656
Ensembl chr12:39,314,027...39,461,244 		JBrowse link
G Ticrr TOPBP1-interacting checkpoint and replication regulator involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:133,597,618...133,639,513
Ensembl chr 1:133,597,716...133,639,523 		JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:103,887,805...103,931,662
Ensembl chr 8:103,887,865...103,931,674 		JBrowse link
G Trim39 tripartite motif-containing 39 involved_in ISO
IEA
ISS		 (PMID:23213251)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:23213251 GO_REF:0000024 GO_REF:0000107 NCBI chr20:2,003,320...2,017,175
Ensembl chr20:1,983,533...2,020,117 		JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:17643121), (PMID:19261748)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:17525340 PMID:17525341 PMID:17525342 PMID:17643121 PMID:19261748 GO_REF:0000024 GO_REF:0000107 NCBI chr17:9,523,793...9,592,810
Ensembl chr17:9,527,794...9,592,799 		JBrowse link
mitotic intra-S DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in ISO
IEA
ISS		 (PMID:15916964)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:15916964 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236 		JBrowse link
G Chek2 checkpoint kinase 2 involved_in ISO (PMID:11298456) RGD PMID:11298456 NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286 		JBrowse link
G Eme1 essential meiotic structure-specific endonuclease 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:79,586,718...79,595,515
Ensembl chr10:79,586,729...79,595,435 		JBrowse link
G Eme2 essential meiotic structure-specific endonuclease subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:13,913,216...13,915,991
Ensembl chr10:13,913,221...13,915,968 		JBrowse link
G Fancd2 FA complementation group D2 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:146,679,014...146,743,422
Ensembl chr 4:146,679,179...146,743,412 		JBrowse link
G Hus1 HUS1 checkpoint clamp component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:83,688,702...83,703,466
Ensembl chr14:83,688,708...83,703,442 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:3027036 (PMID:14690604), (PMID:18614044)
GO_REF:0000033
GO_REF:0000118		 Ensembl
RGD
GO_Central
TreeGrafter		 PMID:14690604 PMID:18614044 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:103557 (PMID:15533840)		 Ensembl
RGD		 PMID:15533840 GO_REF:0000107 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:202,790,295...202,796,008
Ensembl chr 1:202,790,466...202,795,843 		JBrowse link
G Nek11 NIMA-related kinase 11 involved_in ISO
IBA		 (PMID:15161910)
GO_REF:0000033		 RGD
GO_Central		 PMID:15161910 GO_REF:0000033 NCBI chr 8:105,767,230...106,026,676
Ensembl chr 8:105,770,548...106,026,676 		JBrowse link
G Rad17 RAD17 checkpoint clamp loader component involved_in ISO (PMID:15538388) RGD PMID:15538388 NCBI chr 2:31,764,260...31,794,542
Ensembl chr 2:31,764,261...31,794,072 		JBrowse link
G Rad9a RAD9 checkpoint clamp component A involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
UniProtKB:P26306 (PMID:9766521)		 GO_Central
RGD		 PMID:9766521 GO_REF:0000033 NCBI chr 1:201,488,511...201,553,582
Ensembl chr 1:201,487,136...201,553,608 		JBrowse link
G Rad9b RAD9 checkpoint clamp component B involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:34,217,868...34,248,380
Ensembl chr12:34,218,024...34,248,372 		JBrowse link
G Tipin timeless interacting protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:17102137)		 UniProt
RGD		 PMID:17102137 GO_REF:0000024 NCBI chr 8:64,780,813...64,801,358
Ensembl chr 8:64,780,828...64,801,352 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within ISO MGI:101816 (PMID:15533840) RGD PMID:15533840 NCBI chr 4:123,993,670...124,020,922
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
negative regulation of DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd4 bromodomain containing 4 involved_in ISO (PMID:23728299) RGD PMID:23728299 NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539 		JBrowse link
G Chek2 checkpoint kinase 2 IMP RGD PMID:20637979 RGD:10401658 NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286 		JBrowse link
negative regulation of DNA damage response, signal transduction by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd44 CD44 molecule involved_in ISO
IEA		 (PMID:17045821)
GO_REF:0000107
(MGI:3690285|PMID:17045821)		 RGD
Ensembl		 PMID:17045821 GO_REF:0000107 MGI:3690285 NCBI chr 3:89,155,850...89,244,615
Ensembl chr 3:89,157,058...89,244,620 		JBrowse link
G Cd74 CD74 molecule involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(MGI:3690285|PMID:17045821)
(PMID:17045821)		 BHF-UCL
GO_Central
Ensembl
RGD		 PMID:17045821 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:3690285 NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003 		JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in ISO
IEA		 (MGI:5318016|PMID:20736167)
GO_REF:0000107		 RGD
Ensembl		 PMID:20736167 GO_REF:0000107 MGI:5318016 NCBI chr11:33,890,706...34,009,420
Ensembl chr11:33,890,490...34,009,420 		JBrowse link
G Dyrk3 dual specificity tyrosine phosphorylation regulated kinase 3 involved_in IEA
ISO		 GO_REF:0000107
(MGI:4838949|PMID:20167603)		 Ensembl
RGD		 PMID:20167603 GO_REF:0000107 MGI:4838949 NCBI chr13:42,594,120...42,604,898
Ensembl chr13:42,594,121...42,604,778 		JBrowse link
G Kdm1a lysine demethylase 1A involved_in ISO (PMID:17805299) RGD PMID:17805299 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319 		JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 involved_in ISO
IEA
ISS		 (PMID:29295817)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:29295817 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:44,680,229...44,720,172
Ensembl chr 3:44,681,632...44,720,168 		JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:10360174), (PMID:9529249) RGD PMID:9529249 PMID:10360174 NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915 		JBrowse link
G Mif macrophage migration inhibitory factor involved_in ISO (PMID:17045821)
(MGI:3690285|PMID:17045821)		 RGD PMID:17045821 MGI:3690285 NCBI chr20:12,790,919...12,791,784
Ensembl chr20:12,790,902...12,799,504 		JBrowse link
G Psmd10 proteasome 26S subunit, non-ATPase 10 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:16023600)		 UniProt
Ensembl
RGD		 PMID:16023600 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:104,656,809...104,665,122
Ensembl chr  X:104,656,812...104,665,097 		JBrowse link
G Pttg1ip PTTG1 interacting protein acts_upstream_of_or_within ISO (PMID:24506068) RGD PMID:24506068 NCBI chr20:11,030,013...11,047,742
Ensembl chr20:11,030,015...11,047,316 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:11672523) RGD PMID:11672523 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969 		JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr11:86,182,788...86,186,203
Ensembl chr11:86,181,909...86,186,200 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:17690110) RGD PMID:17690110 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
negative regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcbp4 poly(rC) binding protein 4 acts_upstream_of_or_within ISO (PMID:20817677) RGD PMID:20817677 NCBI chr 8:107,092,688...107,103,276
Ensembl chr 8:107,093,013...107,103,276 		JBrowse link
negative regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:35210392) RGD PMID:35210392 NCBI chr 8:79,292,282...79,306,998
Ensembl chr 8:79,294,511...79,305,496 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:17049931) RGD PMID:17049931 NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
negative regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir221 microRNA 221 involved_in ISO (PMID:24147153) RGD PMID:24147153 NCBI chr  X:3,429,465...3,429,573
Ensembl chr  X:3,429,465...3,429,573 		JBrowse link
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000118
GO_REF:0000033
(PMID:20725033)		 UniProt
TreeGrafter
GO_Central
RGD		 PMID:20725033 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:204,387,215...204,395,495
Ensembl chr 1:204,387,215...204,395,483 		JBrowse link
G Otub1l1 OTU deubiquitinase, ubiquitin aldehyde binding 1 like 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 7:14,195,783...14,196,918
Ensembl chr 7:14,195,918...14,196,727 		JBrowse link
G Otub2 OTU deubiquitinase, ubiquitin aldehyde binding 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:122,545,067...122,563,657
Ensembl chr 6:122,545,061...122,563,644 		JBrowse link
G Rnf169 ring finger protein 169 involved_in ISO (PMID:22492721), (PMID:22733822), (PMID:22742833) RGD PMID:22492721 PMID:22733822 PMID:22742833 NCBI chr 1:154,250,462...154,311,867
Ensembl chr 1:154,254,473...154,311,653 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:17690110) RGD PMID:17690110 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
negative regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (PMID:9461559) RGD PMID:9461559 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065 		JBrowse link
G C1qbp complement C1q binding protein involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:31353207)		 Ensembl
UniProt
RGD		 PMID:31353207 GO_REF:0000024 GO_REF:0000107 NCBI chr10:55,699,954...55,704,605
Ensembl chr10:55,699,954...55,704,649 		JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO
IBA		 (PMID:30356214), (PMID:31544964)
GO_REF:0000033
(MGI:6241455|PMID:30356214), (MGI:6370284|PMID:31544964)		 RGD
GO_Central		 PMID:30356214 PMID:31544964 GO_REF:0000033 MGI:6241455 MGI:6370284 NCBI chr 8:79,292,282...79,306,998
Ensembl chr 8:79,294,511...79,305,496 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:28512243)		 UniProt
RGD		 PMID:28512243 GO_REF:0000024 NCBI chr 3:140,709,984...140,756,757
Ensembl chr 3:140,709,991...140,756,696 		JBrowse link
G Fancb FA complementation group B involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2156841 (PMID:25520194)		 GO_Central
RGD		 PMID:25520194 GO_REF:0000033 NCBI chr  X:29,403,771...29,420,484
Ensembl chr  X:29,403,771...29,420,192 		JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in ISO (PMID:19736316)
(MGI:5566975|PMID:24108124)		 RGD PMID:19736316 PMID:24108124 MGI:5566975 NCBI chr17:66,749,506...66,787,590
Ensembl chr17:66,749,534...66,787,590 		JBrowse link
G Helb DNA helicase B involved_in ISO (PMID:26774285)
(MGI:5766842|PMID:26774285)		 RGD PMID:26774285 MGI:5766842 NCBI chr 7:55,588,510...55,615,979
Ensembl chr 7:55,588,798...55,615,585 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO
IEA		 (PMID:32832608)
GO_REF:0000107		 RGD
Ensembl		 PMID:32832608 GO_REF:0000107 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Klhl15 kelch-like family member 15 involved_in ISS
ISO		 GO_REF:0000024
(PMID:27561354), (PMID:35219381)		 UniProt
RGD		 PMID:27561354 PMID:35219381 GO_REF:0000024 NCBI chr  X:58,994,726...59,050,207
Ensembl chr  X:58,995,461...59,046,069 		JBrowse link
G Kmt5a lysine methyltransferase 5A involved_in ISO (PMID:27338793) RGD PMID:27338793 NCBI chr12:32,139,353...32,167,777
Ensembl chr12:32,139,178...32,162,711 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:29656893) RGD PMID:29656893 NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
G Parpbp PARP1 binding protein involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000118
GO_REF:0000033
GO_REF:0000002
(PMID:22153967)		 UniProt
TreeGrafter
GO_Central
InterPro
RGD		 PMID:22153967 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:22,511,427...22,580,834
Ensembl chr 7:22,511,427...22,573,695 		JBrowse link
G Plk1 polo-like kinase 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:28512243)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:28512243 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:176,716,420...176,726,400
Ensembl chr 1:176,716,420...176,726,400 		JBrowse link
G Polq DNA polymerase theta involved_in ISO (PMID:25642963), (PMID:28695890), (PMID:36455556)
(MGI:5621198|PMID:25642960), (MGI:5920742|PMID:28687761), (MGI:6869820|PMID:29058711)		 RGD PMID:25642960 PMID:25642963 PMID:28687761 PMID:28695890 PMID:29058711 More... MGI:5621198 MGI:5920742 MGI:6869820 NCBI chr11:63,673,796...63,775,905
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Radx RPA1 related single stranded DNA binding protein, X-linked involved_in ISO
IEA
ISS		 (PMID:28735897)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:28735897 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:103,089,284...103,176,840
Ensembl chr  X:103,089,284...103,176,838 		JBrowse link
G Recql5 RecQ like helicase 5 acts_upstream_of_or_within ISO MGI:2448558 (PMID:25520194) RGD PMID:25520194 NCBI chr10:101,126,544...101,165,739
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO (PMID:23333306)
(MGI:5468037|PMID:23306437), (MGI:5476381|PMID:23333305)		 RGD PMID:23306437 PMID:23333305 PMID:23333306 MGI:5468037 MGI:5476381 NCBI chr 3:36,554,689...36,607,961
Ensembl chr 3:36,554,697...36,603,617 		JBrowse link
G Rmi2 RecQ mediated genome instability 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:4,829,333...4,837,264
Ensembl chr10:4,830,553...4,837,235 		JBrowse link
G Senp3 SUMO specific peptidase 3 involved_in ISO (PMID:32832608) RGD PMID:32832608 NCBI chr10:54,390,698...54,399,590
Ensembl chr10:54,390,694...54,399,593 		JBrowse link
G Shld1 shieldin complex subunit 1 involved_in ISO
IBA		 (PMID:29656893)
GO_REF:0000033		 RGD
GO_Central		 PMID:29656893 GO_REF:0000033 NCBI chr 3:119,938,695...120,011,068
Ensembl chr 3:119,938,833...120,009,550 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in ISO (PMID:29656893) RGD PMID:29656893 NCBI chr16:9,544,940...9,640,323
Ensembl chr16:9,548,660...9,639,965 		JBrowse link
G Shld3 shieldin complex subunit 3 involved_in ISO (PMID:29656893) RGD PMID:29656893 NCBI chr 2:35,297,255...35,302,071
Ensembl chr 2:35,295,859...35,302,346 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:25294876) RGD PMID:25294876 NCBI chr 9:111,243,445...111,387,272
Ensembl chr 9:111,247,702...111,349,665 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in ISO (PMID:23333306), (PMID:23345425)
(MGI:5476381|PMID:23333305), (MGI:5887194|PMID:20362325)		 RGD PMID:20362325 PMID:23333305 PMID:23333306 PMID:23345425 MGI:5476381 MGI:5887194 NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Ubqln4 ubiquilin 4 involved_in ISO (PMID:30612738) RGD PMID:30612738 NCBI chr 2:174,012,726...174,028,062
Ensembl chr 2:174,012,777...174,028,059 		JBrowse link
negative regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aunip aurora kinase A and ninein interacting protein involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:29042561)		 UniProt
Ensembl
RGD		 PMID:29042561 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:146,722,329...146,734,924
Ensembl chr 5:146,722,337...146,736,501 		JBrowse link
G Cyren cell cycle regulator of NHEJ involved_in ISO
IEA
ISS		 (PMID:28959974)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:28959974 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:63,547,311...63,553,394
Ensembl chr 4:63,547,335...63,551,602 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:25820262) RGD PMID:25820262 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19549901)		 UniProt
RGD		 PMID:19549901 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784 		JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in ISO (PMID:26359349) RGD PMID:26359349 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:24316220)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:24316220 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nudt16l1 nudix hydrolase 16 like 1 involved_in ISO (PMID:28241136) RGD PMID:28241136 NCBI chr10:10,636,174...10,638,090
Ensembl chr10:10,636,174...10,688,370 		JBrowse link
negative regulation of double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ogg1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within ISO (PMID:19506022) RGD PMID:19506022 NCBI chr 4:146,474,701...146,481,959
Ensembl chr 4:146,474,750...146,484,766 		JBrowse link
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ackr3 atypical chemokine receptor 3 involved_in ISO (PMID:20388803) RGD PMID:20388803 NCBI chr 9:90,799,682...90,811,246
Ensembl chr 9:90,799,686...90,811,237 		JBrowse link
G Atad5 ATPase family, AAA domain containing 5 acts_upstream_of_or_within ISO (PMID:15983387) RGD PMID:15983387 NCBI chr10:65,070,682...65,118,489
Ensembl chr10:65,070,689...65,117,845 		JBrowse link
G Bcl2l1 Bcl2-like 1 involved_in ISO (PMID:16608847) RGD PMID:16608847 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479 		JBrowse link
G Bid BH3 interacting domain death agonist involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5428930 (PMID:26219591)		 Ensembl
RGD		 PMID:26219591 GO_REF:0000107 NCBI chr 4:154,113,198...154,136,353
Ensembl chr 4:154,113,198...154,134,720 		JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (PMID:23352644) RGD PMID:23352644 NCBI chr15:45,212,797...45,228,001
Ensembl chr15:45,212,803...45,227,636 		JBrowse link
G Cdkn2d cyclin dependent kinase inhibitor 2D involved_in ISO (PMID:15750620) RGD PMID:15750620 NCBI chr 8:19,831,874...19,834,640
Ensembl chr 8:19,831,866...19,834,674 		JBrowse link
G Clu clusterin involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:16113678)		 UniProt
Ensembl
RGD		 PMID:16113678 GO_REF:0000024 GO_REF:0000107 NCBI chr15:40,161,068...40,200,315
Ensembl chr15:40,174,617...40,200,315 		JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 involved_in ISO (PMID:20388803) RGD PMID:20388803 NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168 		JBrowse link
G Ddias DNA damage-induced apoptosis suppressor involved_in ISO (PMID:24214091) RGD PMID:24214091 NCBI chr 1:146,906,150...146,930,462
Ensembl chr 1:146,906,154...146,930,462 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 involved_in ISO (PMID:14561758) RGD PMID:14561758 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969 		JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr11:86,182,788...86,186,203
Ensembl chr11:86,181,909...86,186,200 		JBrowse link
G Tmem161a transmembrane protein 161A involved_in ISO (PMID:16551573) RGD PMID:16551573 NCBI chr16:19,237,638...19,248,151
Ensembl chr16:19,238,487...19,248,087 		JBrowse link
G Tpt1 tumor protein, translationally-controlled 1 acts_upstream_of_or_within ISO (PMID:11598139) RGD PMID:11598139 NCBI chr15:51,156,728...51,159,629
Ensembl chr15:51,146,154...51,159,625 		JBrowse link
G Trim32 tripartite motif-containing 32 involved_in ISO (PMID:18632609) RGD PMID:18632609 NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018 		JBrowse link
G Usp47 ubiquitin specific peptidase 47 acts_upstream_of_or_within ISO MGI:4130032 (PMID:19966869) RGD PMID:19966869 NCBI chr 1:166,152,104...166,235,312
Ensembl chr 1:166,152,199...166,235,312 		JBrowse link
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad5 ATPase family, AAA domain containing 5 involved_in ISO (MGI:3584078|PMID:15983387) RGD PMID:15983387 MGI:3584078 NCBI chr10:65,070,682...65,118,489
Ensembl chr10:65,070,689...65,117,845 		JBrowse link
G Bcl2l12 Bcl2 like 12 acts_upstream_of_or_within ISO (PMID:20837658) RGD PMID:20837658 NCBI chr 1:95,472,272...95,480,991
Ensembl chr 1:95,472,272...95,480,991 		JBrowse link
G Cd44 CD44 molecule involved_in ISO
IEA		 (PMID:17045821)
GO_REF:0000107
(MGI:3690285|PMID:17045821)		 RGD
Ensembl		 PMID:17045821 GO_REF:0000107 MGI:3690285 NCBI chr 3:89,155,850...89,244,615
Ensembl chr 3:89,157,058...89,244,620 		JBrowse link
G Cd74 CD74 molecule involved_in ISO
IBA
IEA
ISS		 (PMID:17045821)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
(MGI:3690285|PMID:17045821)		 RGD
GO_Central
Ensembl
BHF-UCL		 PMID:17045821 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:3690285 NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003 		JBrowse link
G Ell3 elongation factor for RNA polymerase II 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:22768269)		 Ensembl
RGD		 PMID:22768269 GO_REF:0000107 NCBI chr 3:108,413,035...108,417,181
Ensembl chr 3:108,410,448...108,417,132 		JBrowse link
G Kdm1a lysine demethylase 1A involved_in ISO (PMID:17805299) RGD PMID:17805299 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319 		JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:29295817)		 UniProt
Ensembl
RGD		 PMID:29295817 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:44,680,229...44,720,172
Ensembl chr 3:44,681,632...44,720,168 		JBrowse link
G Mif macrophage migration inhibitory factor involved_in ISO (PMID:17045821) RGD PMID:17045821 NCBI chr20:12,790,919...12,791,784
Ensembl chr20:12,790,902...12,799,504 		JBrowse link
G Muc1 mucin 1, cell surface associated involved_in ISO (PMID:15710329) RGD PMID:15710329 NCBI chr 2:174,635,989...174,640,738
Ensembl chr 2:174,635,995...174,640,733 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO
IEA		 (MGI:2152474|PMID:11672522)
GO_REF:0000107		 RGD
Ensembl		 PMID:11672522 GO_REF:0000107 MGI:2152474 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Triap1 TP53 regulated inhibitor of apoptosis 1 involved_in ISO (PMID:15735003) RGD PMID:15735003 NCBI chr12:41,267,534...41,270,053
Ensembl chr12:41,267,549...41,270,042 		JBrowse link
G Zfp385a zinc finger protein 385A involved_in ISO (PMID:17719541) RGD PMID:17719541 NCBI chr 7:134,448,914...134,475,548
Ensembl chr 7:134,448,921...134,475,548 		JBrowse link
negative regulation of mitotic DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp1r10 protein phosphatase 1, regulatory subunit 10 involved_in ISO UniProtKB:Q15554 (PMID:23426265) RGD PMID:23426265 NCBI chr20:2,822,995...2,838,125
Ensembl chr20:2,822,995...2,837,611 		JBrowse link
negative regulation of protection from non-homologous end joining at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr10:2,416,259...2,448,364
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO (MGI:3758502|PMID:14690602) RGD PMID:14690602 MGI:3758502 NCBI chr 1:80,140,495...80,168,705
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in ISO (MGI:3758502|PMID:14690602) RGD PMID:14690602 MGI:3758502 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
negative regulation of telomere maintenance in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO (MGI:5645200|PMID:22579284) RGD PMID:22579284 MGI:5645200 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 BRCA2, DNA repair associated involved_in ISO
IEA		 (PMID:16845393)
GO_REF:0000107		 RGD
Ensembl		 PMID:16845393 GO_REF:0000107 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567 		JBrowse link
G Brip1 BRCA1 interacting helicase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Cetn1 centrin 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:651,591...652,293
Ensembl chr18:651,591...652,293 		JBrowse link
G Cetn2 centrin 2 involved_in ISO
IBA		 (PMID:15964821)
GO_REF:0000033		 RGD
GO_Central		 PMID:15964821 GO_REF:0000033 NCBI chr  X:150,769,944...150,774,833
Ensembl chr  X:150,769,953...150,774,919 		JBrowse link
G Cetn4 centrin 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:120,199,951...120,203,311
Ensembl chr 2:120,199,942...120,203,348 		JBrowse link
G Commd1 copper metabolism domain containing 1 involved_in ISO (PMID:23144634) RGD PMID:23144634 NCBI chr14:96,880,463...96,984,494
Ensembl chr14:96,880,463...96,984,501 		JBrowse link
G Dclre1a DNA cross-link repair 1A acts_upstream_of_or_within ISO MGI:2180947 (PMID:10848582) RGD PMID:10848582 NCBI chr 1:255,569,911...255,589,815
Ensembl chr 1:255,569,919...255,589,678 		JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in ISO (PMID:19109893) RGD PMID:19109893 NCBI chr 3:77,185,114...77,207,650
Ensembl chr 3:77,185,109...77,207,631 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
acts_upstream_of_or_within		 ISO (PMID:7657672)
MGI:2183944 (PMID:8275084)
(PMID:3290851)
(PMID:22547097)		 RGD PMID:3290851 PMID:7657672 PMID:8275084 PMID:22547097 NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within		 ISO (PMID:8692841)
MGI:2183949 (PMID:11950998), (PMID:9651581)		 RGD PMID:8692841 PMID:9651581 PMID:11950998 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO
IEA		 (PMID:17466626), (PMID:17509950), (PMID:8692841)
GO_REF:0000002		 RGD
InterPro		 PMID:8692841 PMID:17466626 PMID:17509950 GO_REF:0000002 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit acts_upstream_of_or_within
involved_in		 ISO (PMID:10644440)
(PMID:10413517), (PMID:11790111), (PMID:14728600), (PMID:22547097), (PMID:32034146), (PMID:8797827)		 RGD PMID:8797827 PMID:10413517 PMID:10644440 PMID:11790111 PMID:14728600 More... NCBI chr10:2,416,259...2,448,364
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease involved_in
acts_upstream_of_or_within		 ISO (PMID:11259578), (PMID:32522879), (PMID:32821917), (PMID:7657672), (PMID:8090225)
MGI:2182793 (PMID:10022922)		 RGD PMID:7657672 PMID:8090225 PMID:10022922 PMID:11259578 PMID:32522879 More... NCBI chr 9:46,309,477...46,354,478
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 involved_in ISO (PMID:20603015), (PMID:20603016), (PMID:25430771) RGD PMID:20603015 PMID:20603016 PMID:25430771 NCBI chr 1:117,915,323...117,945,044
Ensembl chr 1:117,917,099...117,944,977 		JBrowse link
G Fancc FA complementation group C involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:1858041 (PMID:8704201)
GO_REF:0000118
GO_REF:0000033		 Ensembl
RGD
TreeGrafter
GO_Central		 PMID:8704201 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:1,680,660...1,822,610
Ensembl chr17:1,681,324...1,829,376 		JBrowse link
G Gtf2h1 general transcription factor IIH subunit 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:97,321,417...97,349,455
Ensembl chr 1:97,321,394...97,349,455 		JBrowse link
G Gtf2h2 general transcription factor IIH subunit 2 involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 2:31,623,752...31,652,697
Ensembl chr 2:31,624,678...31,652,592 		JBrowse link
G Gtf2h3 general transcription factor IIH subunit 3 involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr12:32,009,010...32,025,484
Ensembl chr12:32,009,014...32,025,497 		JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 acts_upstream_of_or_within ISO (PMID:23637614)
MGI:5514340 (PMID:23637614)		 RGD PMID:23637614 NCBI chr 1:46,656,804...46,663,512
Ensembl chr 1:46,656,859...46,664,939 		JBrowse link
G Hus1 HUS1 checkpoint clamp component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:83,688,702...83,703,466
Ensembl chr14:83,688,708...83,703,442 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:32034146)		 UniProt
Ensembl
RGD		 PMID:32034146 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Mnat1 MNAT1 component of CDK activating kinase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:91,814,703...91,971,945
Ensembl chr 6:91,814,749...91,970,744 		JBrowse link
G Nthl1 nth-like DNA glycosylase 1 involved_in ISO
IBA		 (PMID:8990169)
GO_REF:0000033
(MGI:1289919|PMID:9743625)		 RGD
GO_Central		 PMID:8990169 PMID:9743625 GO_REF:0000033 MGI:1289919 NCBI chr10:13,655,791...13,661,958
Ensembl chr10:13,655,785...13,661,957 		JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within ISO (PMID:19506022) RGD PMID:19506022 NCBI chr 4:146,474,701...146,481,959
Ensembl chr 4:146,474,750...146,484,766 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO (PMID:1508673) RGD PMID:1508673 NCBI chr  X:58,034,617...58,348,612
Ensembl chr  X:58,034,619...58,348,536 		JBrowse link
G Poll DNA polymerase lambda involved_in ISO (PMID:10982892) RGD PMID:10982892 NCBI chr 1:244,400,202...244,408,762
Ensembl chr 1:244,400,204...244,408,662 		JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in ISO (PMID:9372924) RGD PMID:9372924 NCBI chr19:23,313,563...23,320,702
Ensembl chr19:23,314,797...23,320,695 		JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein involved_in ISO
IEA		 (PMID:19941824), (PMID:8168482), (PMID:9734359)
GO_REF:0000104		 RGD
UniProt		 PMID:8168482 PMID:9734359 PMID:19941824 GO_REF:0000104 NCBI chr 5:70,090,232...70,128,340
Ensembl chr 5:70,090,232...70,128,319 		JBrowse link
G Rpa1 replication protein A1 involved_in ISO
IBA		 (PMID:9430682)
GO_REF:0000033		 RGD
GO_Central		 PMID:9430682 GO_REF:0000033 NCBI chr10:60,148,869...60,199,970
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Rpa2 replication protein A2 involved_in ISO
IEA
IBA
ISS		 (PMID:9430682)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000024		 RGD
TreeGrafter
GO_Central
UniProt		 PMID:9430682 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rpa3 replication protein A3 involved_in ISO
IBA		 (PMID:9430682)
GO_REF:0000033		 RGD
GO_Central		 PMID:9430682 GO_REF:0000033 NCBI chr 4:36,304,649...36,307,755
Ensembl chr 4:36,304,651...36,307,709 		JBrowse link
G Rpa3l1 replication protein A3 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:45,908,653...45,909,063
Ensembl chr12:45,908,683...45,909,048 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO (PMID:19596236) RGD PMID:19596236 NCBI chr10:11,526,623...11,549,313
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
G Tp53 tumor protein p53 involved_in ISO
IEA
ISS		 (PMID:7663514)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:7663514 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 ISO (PMID:21148310)
MGI:1857939 (PMID:11950998), (PMID:12509265)		 RGD PMID:11950998 PMID:12509265 PMID:21148310 NCBI chr 5:60,431,673...60,475,726
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:11259578), (PMID:19941824), (PMID:8168482), (PMID:9734359)
(PMID:22431748)
MGI:1859840|MGI:1931883 (PMID:12815074), (PMID:17049932), (PMID:19615386), (PMID:9067411)
GO_REF:0000033		 RGD
GO_Central		 PMID:8168482 PMID:9067411 PMID:9734359 PMID:11259578 PMID:12815074 More... GO_REF:0000033 NCBI chr 4:123,993,670...124,020,922
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
nucleotide-excision repair involved in interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO
IBA		 (PMID:32034146)
GO_REF:0000033		 RGD
GO_Central		 PMID:32034146 GO_REF:0000033 NCBI chr10:2,416,259...2,448,364
Ensembl chr10:2,419,038...2,448,369 		JBrowse link
G Ercc4l1 excision repair cross-complementing rodent repair deficiency, complementation group 4-like 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr10:954,927...983,651
Ensembl chr10:954,977...983,174 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:60,431,673...60,475,726
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
nucleotide-excision repair, DNA damage recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xpa XPA, DNA damage recognition and repair factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:60,431,673...60,475,726
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
nucleotide-excision repair, DNA duplex unwinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO (PMID:17466626) RGD PMID:17466626 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329 		JBrowse link
nucleotide-excision repair, DNA gap filling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lig4 DNA ligase 4 involved_in ISO
IBA		 (PMID:12517771), (PMID:17290226)
GO_REF:0000033		 RGD
GO_Central		 PMID:12517771 PMID:17290226 GO_REF:0000033 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Polb DNA polymerase beta NOT|involved_in ISO (PMID:20227374) RGD PMID:20227374 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in ISO
IBA
IEA		 (PMID:20227374)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:20227374 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:95,025,462...95,041,559
Ensembl chr 1:95,025,499...95,036,465 		JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit involved_in ISO
IBA		 (PMID:20227374)
GO_REF:0000033		 RGD
GO_Central		 PMID:20227374 GO_REF:0000033 NCBI chr 1:154,417,893...154,456,687
Ensembl chr 1:154,418,084...154,456,665 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit involved_in ISO
IBA		 (PMID:20227374)
GO_REF:0000033		 RGD
GO_Central		 PMID:20227374 GO_REF:0000033 NCBI chr12:46,345,420...46,393,984
Ensembl chr12:46,345,420...46,393,939 		JBrowse link
G Polk DNA polymerase kappa involved_in ISO (PMID:20227374) RGD PMID:20227374 NCBI chr 2:27,822,228...27,882,331
Ensembl chr 2:27,822,679...27,882,313 		JBrowse link
nucleotide-excision repair, preincision complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2h5 general transcription factor IIH subunit 5 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:5514340 (PMID:23637614)		 GO_Central
RGD		 PMID:23637614 GO_REF:0000033 NCBI chr 1:46,656,804...46,663,512
Ensembl chr 1:46,656,859...46,664,939 		JBrowse link
G LOC120103497 general transcription factor IIH subunit 5-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:27,109,209...27,114,478
Ensembl chr 6:27,111,331...27,111,546 		JBrowse link
photoreactive repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cry2 cryptochrome circadian regulator 2 NOT|involved_in ISO (PMID:12627958) RGD PMID:12627958 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965 		JBrowse link
positive regulation of base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam168a family with sequence similarity 168, member A involved_in ISO
IBA		 (PMID:25260657)
GO_REF:0000033		 RGD
GO_Central		 PMID:25260657 GO_REF:0000033 NCBI chr 1:155,057,352...155,203,439
Ensembl chr 1:155,057,352...155,201,220 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:18973764) RGD PMID:18973764 NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
positive regulation of DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (PMID:23352644) RGD PMID:23352644 NCBI chr15:45,212,797...45,228,001
Ensembl chr15:45,212,803...45,227,636 		JBrowse link
G Tti1 TELO2 interacting protein 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:36724785)		 Ensembl
RGD		 PMID:36724785 GO_REF:0000107 NCBI chr 3:146,639,048...146,682,945
Ensembl chr 3:146,639,054...146,682,847 		JBrowse link
positive regulation of DNA damage response, signal transduction by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd1 ankyrin repeat domain 1 involved_in ISO
IEA		 (PMID:20599664)
GO_REF:0000107		 RGD
Ensembl		 PMID:20599664 GO_REF:0000107 NCBI chr 1:233,815,851...233,834,891
Ensembl chr 1:233,815,851...233,834,919 		JBrowse link
G Atm ATM serine/threonine kinase involved_in ISO (PMID:9733515) RGD PMID:9733515 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO (PMID:9925639) RGD PMID:9925639 NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136 		JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in ISO (PMID:9529249) RGD PMID:9529249 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149 		JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO (PMID:15660129) RGD PMID:15660129 NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283 		JBrowse link
G Eef1e1 eukaryotic translation elongation factor 1 epsilon 1 acts_upstream_of_or_within ISO MGI:3574590 (PMID:15680327) RGD PMID:15680327 NCBI chr17:26,148,652...26,159,358
Ensembl chr17:26,148,633...26,215,720 		JBrowse link
G Hic1 HIC ZBTB transcriptional repressor 1 involved_in ISO (MGI:5297787|PMID:16269335) RGD PMID:16269335 MGI:5297787 NCBI chr10:60,014,520...60,019,475
Ensembl chr10:60,011,528...60,019,475 		JBrowse link
G Pla2r1 phospholipase A2 receptor 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19197340)		 UniProt
RGD		 PMID:19197340 GO_REF:0000024 NCBI chr 3:44,883,943...45,013,793
Ensembl chr 3:44,883,943...45,013,660 		JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO
IEA		 (PMID:15102863)
GO_REF:0000107
(MGI:2679929|PMID:14500851)		 RGD
Ensembl		 PMID:14500851 PMID:15102863 GO_REF:0000107 MGI:2679929 NCBI chr18:59,986,020...59,992,434
Ensembl chr18:59,986,017...59,992,429 		JBrowse link
G Spred1 sprouty-related, EVH1 domain containing 1 involved_in ISO (MGI:5318016|PMID:20736167) RGD PMID:20736167 MGI:5318016 NCBI chr 3:103,983,120...104,050,321
Ensembl chr 3:103,983,072...104,049,718 		JBrowse link
G Spred2 sprouty-related, EVH1 domain containing 2 involved_in ISO (MGI:5318016|PMID:20736167) RGD PMID:20736167 MGI:5318016 NCBI chr14:94,149,210...94,250,787
Ensembl chr14:94,148,837...94,249,162 		JBrowse link
positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ing4 inhibitor of growth family, member 4 involved_in ISO (PMID:15251430) RGD PMID:15251430 NCBI chr 4:157,841,882...157,850,519
Ensembl chr 4:157,841,951...157,850,265 		JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212) RGD PMID:16213212 NCBI chr10:53,610,836...53,613,966
Ensembl chr10:53,610,421...53,613,966 		JBrowse link
G Zfp385a zinc finger protein 385A involved_in ISO (PMID:17719541) RGD PMID:17719541 NCBI chr 7:134,448,914...134,475,548
Ensembl chr 7:134,448,921...134,475,548 		JBrowse link
G Znhit1 zinc finger, HIT-type containing 1 involved_in ISO (PMID:17700068) RGD PMID:17700068 NCBI chr12:19,686,606...19,692,880
Ensembl chr12:19,686,148...19,692,880 		JBrowse link
positive regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:17525340), (PMID:19261748)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:17525340 PMID:19261748 GO_REF:0000024 GO_REF:0000107 NCBI chr14:8,796,281...8,810,625
Ensembl chr14:8,796,266...8,810,622 		JBrowse link
G Actl6a actin-like 6A involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 2:115,492,374...115,508,401
Ensembl chr 2:115,492,285...115,508,401 		JBrowse link
G Actr5 actin related protein 5 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 3:147,282,461...147,295,870
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Actr8 actin related protein 8 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr16:5,164,131...5,186,353
Ensembl chr16:5,164,129...5,178,577 		JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in ISO (MGI:3698695|PMID:17121854) RGD PMID:17121854 MGI:3698695 NCBI chr 1:159,896,889...159,920,505
Ensembl chr 1:159,896,880...159,920,627 		JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19261746), (PMID:19261748), (PMID:19261749)		 UniProt
RGD		 PMID:19261746 PMID:19261748 PMID:19261749 GO_REF:0000024 NCBI chr16:18,068,830...18,074,938
Ensembl chr16:18,068,884...18,074,923 		JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISO
IEA
ISS		 (PMID:19261748)
GO_REF:0000104
GO_REF:0000024		 RGD
UniProt		 PMID:19261748 GO_REF:0000024 GO_REF:0000104 NCBI chr 6:24,369,021...24,788,416
Ensembl chr 6:24,369,022...24,833,951 		JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in IEA
ISO		 GO_REF:0000107
(PMID:17525340), (PMID:19261748)		 Ensembl
RGD		 PMID:17525340 PMID:19261748 GO_REF:0000107 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISO
ISS		 (PMID:17525341), (PMID:19261746), (PMID:19261748)
GO_REF:0000024		 RGD
UniProt		 PMID:17525341 PMID:19261746 PMID:19261748 GO_REF:0000024 NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080 		JBrowse link
G Brcc3dc BRCA1/BRCA2-containing complex, subunit 3, domain containing involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:44,014,889...44,016,646
Ensembl chr 7:44,005,646...44,016,670 		JBrowse link
G Cbx8 chromobox 8 IMP RGD PMID:23572236 RGD:9586727 NCBI chr10:104,294,518...104,296,956
Ensembl chr10:104,294,518...104,297,024 		JBrowse link
G Ccdc117 coiled-coil domain containing 117 involved_in ISO
ISS		 (PMID:30742009)
GO_REF:0000024		 RGD
UniProt		 PMID:30742009 GO_REF:0000024 NCBI chr14:80,399,236...80,409,824
Ensembl chr14:80,400,294...80,409,659 		JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma involved_in ISS
ISO		 PMID:16255782
(PMID:16255782)		 RGD PMID:16255782 PMID:16255782 RGD:8554294 NCBI chr 1:87,683,060...87,692,772
Ensembl chr 1:87,684,019...87,694,569 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:24049074) RGD PMID:24049074 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:17115032) RGD PMID:17115032 NCBI chr14:91,176,979...91,349,722
Ensembl chr14:91,177,067...91,344,382 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO UniProtKB:P0DP91|UniProtKB:Q03468 (PMID:22483866) RGD PMID:22483866 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO (PMID:7664335) RGD PMID:7664335 NCBI chr 2:39,647,393...39,686,229
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in ISO
IBA		 (PMID:19234442)
GO_REF:0000033		 RGD
GO_Central		 PMID:19234442 GO_REF:0000033 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Eya2 EYA transcriptional coactivator and phosphatase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:154,335,598...154,519,006
Ensembl chr 3:154,335,400...154,518,793 		JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 involved_in ISO
IBA		 (PMID:19234442)
GO_REF:0000033		 RGD
GO_Central		 PMID:19234442 GO_REF:0000033 NCBI chr 5:144,806,523...144,934,522
Ensembl chr 5:144,806,577...144,934,518 		JBrowse link
G Eya4 EYA transcriptional coactivator and phosphatase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:22,172,275...22,415,978
Ensembl chr 1:22,172,275...22,415,976 		JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in ISO (PMID:14975937) RGD PMID:14975937 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ino80b INO80 complex subunit B involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 4:115,627,907...115,631,069
Ensembl chr 4:115,627,908...115,631,456 		JBrowse link
G Ino80c INO80 complex subunit C involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr18:15,378,764...15,398,574
Ensembl chr18:15,378,770...15,393,403 		JBrowse link
G Ino80d INO80 complex subunit D involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 9:64,447,075...64,514,013
Ensembl chr 9:64,457,165...64,515,242 		JBrowse link
G Ino80e INO80 complex subunit E involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 1:181,461,406...181,472,059
Ensembl chr 1:181,461,408...181,472,469 		JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 7:130,383,853...130,392,667
Ensembl chr 7:130,383,853...130,392,685 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase IDA RGD PMID:1945835 RGD:729332 NCBI chr 1:191,710,980...191,937,760
Ensembl chr 1:191,710,930...191,937,756 		JBrowse link
G Nfrkb nuclear factor related to kappa B binding protein involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 8:29,831,802...29,863,360
Ensembl chr 8:29,831,812...29,863,359 		JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (PMID:18819933) RGD PMID:18819933 NCBI chr 9:41,463,361...41,642,322
Ensembl chr 9:41,463,830...41,642,320 		JBrowse link
G Parg poly (ADP-ribose) glycohydrolase IMP RGD PMID:15158362 RGD:2316739 NCBI chr16:7,436,429...7,544,276
Ensembl chr16:7,436,476...7,544,273 		JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO
ISS		 (PMID:24939902)
GO_REF:0000114
GO_REF:0000024		 RGD
ComplexPortal
UniProt		 PMID:24939902 GO_REF:0000024 GO_REF:0000114 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Rnf168 ring finger protein 168 involved_in IEA
ISS
ISO		 GO_REF:0000104
GO_REF:0000024
(PMID:19203578), (PMID:19203579), (PMID:23760478)		 UniProt
RGD		 PMID:19203578 PMID:19203579 PMID:23760478 GO_REF:0000024 GO_REF:0000104 NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO
ISS		 (PMID:18001824), (PMID:18001825)
GO_REF:0000024		 RGD
UniProt		 PMID:18001824 PMID:18001825 GO_REF:0000024 NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:23911537) RGD PMID:23911537 NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:19934257) RGD PMID:19934257 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:24790221) RGD PMID:24790221 NCBI chr 9:111,243,445...111,387,272
Ensembl chr 9:111,247,702...111,349,665 		JBrowse link
G Tfpt TCF3 fusion partner involved_in ISO
IEA		 (MGI:5638510|PMID:23979016)
GO_REF:0000107		 RGD
Ensembl		 PMID:23979016 GO_REF:0000107 MGI:5638510 NCBI chr 1:65,587,633...65,597,407
Ensembl chr 1:65,582,359...65,611,689 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in ISO (PMID:25928429) RGD PMID:25928429 NCBI chr 4:159,927,136...159,946,077
Ensembl chr 4:159,927,139...159,946,029 		JBrowse link
G Tmem161a transmembrane protein 161A involved_in ISO (PMID:16551573) RGD PMID:16551573 NCBI chr16:19,237,638...19,248,151
Ensembl chr16:19,238,487...19,248,087 		JBrowse link
G Trim28 tripartite motif-containing 28 involved_in ISO (PMID:17178852) RGD PMID:17178852 NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO (PMID:16129784) RGD PMID:16129784 NCBI chr 7:30,154,330...30,184,373
Ensembl chr 7:30,154,616...30,184,355 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 IMP RGD PMID:12750002 RGD:1299567 NCBI chr11:85,304,528...85,338,430
Ensembl chr11:85,304,526...85,336,369 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr13:55,520,722...55,556,503
Ensembl chr13:55,520,729...55,556,502 		JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000118
GO_REF:0000033
(PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:19261748)
GO_REF:0000107		 UniProt
TreeGrafter
GO_Central
RGD
Ensembl		 PMID:17525340 PMID:17525341 PMID:17525342 PMID:19261748 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:9,523,793...9,592,810
Ensembl chr17:9,527,794...9,592,799 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in ISO
ISS		 (PMID:25512560)
GO_REF:0000024		 RGD
UniProt		 PMID:25512560 GO_REF:0000024 NCBI chr10:54,282,092...54,299,908
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 6:127,706,739...127,736,499
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
positive regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx11 DEAD/H-box helicase 11 involved_in ISO (PMID:23797032) RGD PMID:23797032 NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550 		JBrowse link
G Fam178b family with sequence similarity 178, member B involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 9:38,805,864...38,913,681
Ensembl chr 9:38,805,864...38,913,672 		JBrowse link
G Fmn2 formin 2 involved_in ISO (PMID:26287480) RGD PMID:26287480 NCBI chr13:86,454,256...86,771,437
Ensembl chr13:86,453,926...86,771,411 		JBrowse link
G Foxm1 forkhead box M1 involved_in ISO
IEA		 (PMID:17101782)
GO_REF:0000107
(MGI:3698692|PMID:17101782)		 RGD
Ensembl		 PMID:17101782 GO_REF:0000107 MGI:3698692 NCBI chr 4:161,639,538...161,652,012
Ensembl chr 4:161,638,816...161,650,684 		JBrowse link
G Khdc3 KH domain containing 3, subcortical maternal complex member involved_in ISS
ISO		 GO_REF:0000024
(MGI:6467697|PMID:29125140), (MGI:6716977|PMID:33115731)		 UniProt
RGD		 PMID:29125140 PMID:33115731 GO_REF:0000024 MGI:6467697 MGI:6716977 NCBI chr 8:73,842,344...73,844,248
Ensembl chr 8:73,842,344...73,844,248 		JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase involved_in ISO
IEA		 (PMID:24147153)
GO_REF:0000107		 RGD
Ensembl		 PMID:24147153 GO_REF:0000107 NCBI chr 1:191,710,980...191,937,760
Ensembl chr 1:191,710,930...191,937,756 		JBrowse link
G Ooep oocyte expressed protein involved_in ISO (MGI:6467697|PMID:29125140) RGD PMID:29125140 MGI:6467697 NCBI chr 8:79,223,388...79,224,554
Ensembl chr 8:79,223,375...79,224,541 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:32538779) RGD PMID:32538779 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:23911928), (PMID:31995034), (PMID:32538779)
(MGI:7258357|PMID:31002797)		 RGD PMID:23911928 PMID:31002797 PMID:31995034 PMID:32538779 MGI:7258357 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Slf1 SMC5-SMC6 complex localization factor 1 involved_in ISO (PMID:25931565) RGD PMID:25931565 NCBI chr 2:6,767,015...6,874,428
Ensembl chr 2:6,767,015...6,867,149 		JBrowse link
G Slf2 SMC5-SMC6 complex localization factor 2 involved_in ISO
IBA		 (PMID:25931565)
GO_REF:0000033		 RGD
GO_Central		 PMID:25931565 GO_REF:0000033 NCBI chr 1:243,782,786...243,845,418
Ensembl chr 1:243,782,246...243,845,250 		JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO (PMID:23509288) RGD PMID:23509288 NCBI chr11:84,766,593...85,007,597
Ensembl chr11:84,766,593...85,007,600 		JBrowse link
G Spire1 spire-type actin nucleation factor 1 involved_in ISO (PMID:26287480) RGD PMID:26287480 NCBI chr18:61,041,914...61,171,670
Ensembl chr18:61,041,290...61,171,899 		JBrowse link
G Spire2 spire-type actin nucleation factor 2 involved_in ISO (PMID:26287480) RGD PMID:26287480 NCBI chr19:51,373,368...51,411,920
Ensembl chr19:51,373,228...51,411,920 		JBrowse link
G Timeless timeless circadian regulator involved_in ISO
ISS		 (PMID:23797032)
GO_REF:0000024		 RGD
UniProt		 PMID:23797032 GO_REF:0000024 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO (PMID:16129784) RGD PMID:16129784 NCBI chr 7:30,154,330...30,184,373
Ensembl chr 7:30,154,616...30,184,355 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 involved_in ISO (PMID:16129784) RGD PMID:16129784 NCBI chr11:85,304,528...85,338,430
Ensembl chr11:85,304,526...85,336,369 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in ISS
ISO		 GO_REF:0000024
(PMID:27715493)		 UniProt
RGD		 PMID:27715493 GO_REF:0000024 NCBI chr10:54,282,092...54,299,908
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
G Zcwpw1 zinc finger CW-type and PWWP domain containing 1 involved_in ISO (MGI:6358520|PMID:31453335), (MGI:6442007|PMID:32374261), (MGI:6443266|PMID:32352380), (MGI:6467709|PMID:32744506) RGD PMID:31453335 PMID:32352380 PMID:32374261 PMID:32744506 MGI:6358520 MGI:6442007 MGI:6443266 MGI:6467709 NCBI chr12:18,880,625...18,910,713
Ensembl chr12:18,880,633...18,910,711 		JBrowse link
positive regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in ISO
IEA		 (PMID:27153538)
GO_REF:0000107		 RGD
Ensembl		 PMID:27153538 GO_REF:0000107 NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877 		JBrowse link
G Actl6a actin-like 6A involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 2:115,492,374...115,508,401
Ensembl chr 2:115,492,285...115,508,401 		JBrowse link
G Actr2 actin related protein 2 involved_in ISO
IEA
ISS		 (PMID:29925947)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:29925947 GO_REF:0000024 GO_REF:0000107 NCBI chr14:94,296,443...94,333,735
Ensembl chr14:94,296,443...94,340,524 		JBrowse link
G Arid2 AT-rich interaction domain 2 involved_in ISO (PMID:28381560) RGD PMID:28381560 NCBI chr 7:127,447,192...127,565,987
Ensembl chr 7:127,447,278...127,563,512 		JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO MGI:2448558 (PMID:25520194) RGD PMID:25520194 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Brd8 bromodomain containing 8 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr18:26,204,892...26,229,999
Ensembl chr18:26,181,732...26,229,884 		JBrowse link
G Crebbp CREB binding protein involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:38128537)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:38128537 GO_REF:0000024 GO_REF:0000107 NCBI chr10:11,335,551...11,461,888
Ensembl chr10:11,335,953...11,461,888 		JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 5:131,143,726...131,151,760
Ensembl chr 5:131,143,729...131,151,742 		JBrowse link
G Ep400 E1A binding protein p400 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr12:45,891,886...46,002,523
Ensembl chr12:45,891,916...45,998,861 		JBrowse link
G Epc1 enhancer of polycomb homolog 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr17:54,503,358...54,594,444
Ensembl chr17:54,503,358...54,594,425 		JBrowse link
G Epc2 enhancer of polycomb homolog 2 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 3:33,867,219...33,967,908
Ensembl chr 3:33,867,219...33,967,150 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:25820262) RGD PMID:25820262 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Fancb FA complementation group B involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1328362 (PMID:25520194)		 GO_Central
RGD		 PMID:25520194 GO_REF:0000033 NCBI chr  X:29,403,771...29,420,484
Ensembl chr  X:29,403,771...29,420,192 		JBrowse link
G Fus Fus RNA binding protein involved_in ISO (PMID:10567410) RGD PMID:10567410 NCBI chr 1:182,576,479...182,590,417
Ensembl chr 1:182,576,545...182,590,414 		JBrowse link
G Hdgfl2 HDGF like 2 involved_in ISO
IEA
ISS		 (PMID:26721387)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:26721387 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:909,581...929,195
Ensembl chr 9:909,614...929,186 		JBrowse link
G Helq helicase, POLQ-like involved_in ISO (MGI:5547892|PMID:24005329) RGD PMID:24005329 MGI:5547892 NCBI chr14:8,818,582...8,862,926
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Ing3 inhibitor of growth family, member 3 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 4:50,477,954...50,505,168
Ensembl chr 4:50,477,962...50,503,715 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:27153538), (PMID:32832608)		 UniProt
Ensembl
RGD		 PMID:27153538 PMID:32832608 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Khdc3 KH domain containing 3, subcortical maternal complex member involved_in ISO
ISS		 (PMID:31609975)
(MGI:6716962|PMID:25936915)
GO_REF:0000024		 RGD
UniProt		 PMID:25936915 PMID:31609975 GO_REF:0000024 MGI:6716962 NCBI chr 8:73,842,344...73,844,248
Ensembl chr 8:73,842,344...73,844,248 		JBrowse link
G Mbtd1 mbt domain containing 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr10:78,839,140...78,895,413
Ensembl chr10:78,839,036...78,893,720 		JBrowse link
G Meaf6 MYST/Esa1-associated factor 6 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 5:137,344,681...137,369,703
Ensembl chr 5:137,344,380...137,370,014 		JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 8:90,642,988...90,664,518
Ensembl chr 8:90,642,988...90,664,519 		JBrowse link
G Morf4l2 mortality factor 4 like 2 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr  X:100,082,562...100,093,658
Ensembl chr  X:100,082,404...100,093,728 		JBrowse link
G Mrgbp MRG domain binding protein involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 3:167,697,129...167,700,592
Ensembl chr 3:167,697,185...167,700,592 		JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO (PMID:27568553) RGD PMID:27568553 NCBI chr10:34,501,359...34,525,474
Ensembl chr10:34,501,384...34,525,469 		JBrowse link
G Ooep oocyte expressed protein involved_in ISO (MGI:6272426|PMID:29955025) RGD PMID:29955025 MGI:6272426 NCBI chr 8:79,223,388...79,224,554
Ensembl chr 8:79,223,375...79,224,541 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISO
ISS		 (PMID:26344098), (PMID:30356214)
GO_REF:0000024		 RGD
UniProt		 PMID:26344098 PMID:30356214 GO_REF:0000024 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 involved_in ISO (PMID:30952868) RGD PMID:30952868 NCBI chr14:95,254,274...95,309,168
Ensembl chr14:95,254,589...95,308,285 		JBrowse link
G Pias4 protein inhibitor of activated STAT, 4 involved_in ISO (PMID:32832608) RGD PMID:32832608 NCBI chr 7:8,546,312...8,559,838
Ensembl chr 7:8,546,312...8,559,808 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:15741314), (PMID:29651020)		 UniProt
RGD		 PMID:15741314 PMID:29651020 GO_REF:0000024 NCBI chr 1:95,458,853...95,468,176
Ensembl chr 1:95,458,850...95,468,345 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO (PMID:17996710), (PMID:17996711) RGD PMID:17996710 PMID:17996711 NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rnf126 ring finger protein 126 involved_in IEA
ISO		 GO_REF:0000107
(PMID:36563124)		 Ensembl
RGD		 PMID:36563124 GO_REF:0000107 NCBI chr 7:9,939,359...9,946,963
Ensembl chr 7:9,938,229...9,946,738 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23115235)		 UniProt
RGD		 PMID:23115235 GO_REF:0000024 NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Skp2 S-phase kinase associated protein 2 involved_in ISO (PMID:22464731)
(MGI:5438910|PMID:22464731)		 RGD PMID:22464731 MGI:5438910 NCBI chr 2:58,161,226...58,189,293
Ensembl chr 2:58,161,229...58,189,338 		JBrowse link
G Timeless timeless circadian regulator involved_in ISO
IEA
ISS		 (PMID:26344098), (PMID:30356214)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:26344098 PMID:30356214 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738 		JBrowse link
G Trrap transformation/transcription domain-associated protein involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr12:9,738,006...9,827,708
Ensembl chr12:9,738,006...9,827,674 		JBrowse link
G Vps72 vacuolar protein sorting 72 homolog involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 2:182,678,594...182,690,185
Ensembl chr 2:182,678,609...182,690,182 		JBrowse link
G Was WASP actin nucleation promoting factor involved_in ISO (PMID:29925947) RGD PMID:29925947 NCBI chr  X:14,405,105...14,413,850
Ensembl chr  X:14,405,124...14,413,849 		JBrowse link
G Wdr48 WD repeat domain 48 involved_in ISO (PMID:27239033), (PMID:27463890) RGD PMID:27239033 PMID:27463890 NCBI chr 8:119,622,053...119,655,264
Ensembl chr 8:119,622,048...119,655,264 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in ISO
ISS		 (PMID:25512560)
GO_REF:0000024		 RGD
UniProt		 PMID:25512560 GO_REF:0000024 NCBI chr10:54,282,092...54,299,908
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
G Yeats4 YEATS domain containing 4 involved_in ISO (PMID:27153538) RGD PMID:27153538 NCBI chr 7:52,858,313...52,865,454
Ensembl chr 7:52,858,305...52,865,635 		JBrowse link
positive regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fh fumarate hydratase involved_in ISO
ISS		 (PMID:26237645)
GO_REF:0000024		 RGD
UniProt		 PMID:26237645 GO_REF:0000024 NCBI chr13:87,524,331...87,550,215
Ensembl chr13:87,524,337...87,550,266 		JBrowse link
G Kdm4d lysine demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) RGD PMID:24550317 NCBI chr 8:11,279,756...11,304,920
Ensembl chr 8:11,268,859...11,305,290 		JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in ISS
ISO		 GO_REF:0000024
(PMID:28114273)		 UniProt
RGD		 PMID:28114273 GO_REF:0000024 NCBI chr 1:201,000,444...201,049,819
Ensembl chr 1:201,000,444...201,049,819 		JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in ISO
ISS		 (PMID:28114273)
GO_REF:0000024		 RGD
UniProt		 PMID:28114273 GO_REF:0000024 NCBI chr 1:69,099,531...69,107,145
Ensembl chr 1:69,099,539...69,107,145 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:29656893) RGD PMID:29656893 NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
G Parp3 poly (ADP-ribose) polymerase family, member 3 involved_in ISO (PMID:24598253) RGD PMID:24598253 NCBI chr 8:107,111,010...107,117,073
Ensembl chr 8:107,111,012...107,116,782 		JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase involved_in ISO (PMID:12032095) RGD PMID:12032095 NCBI chr 1:95,341,465...95,346,921
Ensembl chr 1:95,341,620...95,346,920 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:26237645) RGD PMID:26237645 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO (PMID:28241136)
(MGI:5468037|PMID:23306437), (MGI:5476381|PMID:23333305)		 RGD PMID:23306437 PMID:23333305 PMID:28241136 MGI:5468037 MGI:5476381 NCBI chr 3:36,554,689...36,607,961
Ensembl chr 3:36,554,697...36,603,617 		JBrowse link
G Setmar SET domain and mariner transposase fusion gene involved_in ISO (PMID:20620605), (PMID:21491884) RGD PMID:20620605 PMID:21491884 NCBI chr 4:141,046,058...141,058,183
Ensembl chr 4:141,046,069...141,058,197 		JBrowse link
G Shld1 shieldin complex subunit 1 involved_in ISO
IBA		 (PMID:29656893)
GO_REF:0000033		 RGD
GO_Central		 PMID:29656893 GO_REF:0000033 NCBI chr 3:119,938,695...120,011,068
Ensembl chr 3:119,938,833...120,009,550 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in ISO (PMID:29656893), (PMID:29789392) RGD PMID:29656893 PMID:29789392 NCBI chr16:9,544,940...9,640,323
Ensembl chr16:9,548,660...9,639,965 		JBrowse link
G Shld3 shieldin complex subunit 3 involved_in ISO (PMID:29656893) RGD PMID:29656893 NCBI chr 2:35,297,255...35,302,071
Ensembl chr 2:35,295,859...35,302,346 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:25294876) RGD PMID:25294876 NCBI chr 9:111,243,445...111,387,272
Ensembl chr 9:111,247,702...111,349,665 		JBrowse link
G Top2b DNA topoisomerase II beta IMP RGD PMID:22019940 RGD:13432143 NCBI chr15:9,051,340...9,111,721
Ensembl chr15:9,051,341...9,112,085 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25512560)		 UniProt
RGD		 PMID:25512560 GO_REF:0000024 NCBI chr10:54,282,092...54,299,908
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbh1 F-box DNA helicase 1 acts_upstream_of_or_within ISO (PMID:23361013) RGD PMID:23361013 NCBI chr17:66,749,506...66,787,590
Ensembl chr17:66,749,534...66,787,590 		JBrowse link
G Mtch2 mitochondrial carrier 2 acts_upstream_of_or_within ISO MGI:2449949|MGI:5566664 (PMID:26219591) RGD PMID:26219591 NCBI chr 3:76,830,549...76,850,189
Ensembl chr 3:76,830,413...76,850,189 		JBrowse link
G Nacc2 NACC family member 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:22926524)		 Ensembl
RGD		 PMID:22926524 GO_REF:0000107 NCBI chr 3:8,879,952...8,946,660
Ensembl chr 3:8,883,065...8,946,660 		JBrowse link
G Pias4 protein inhibitor of activated STAT, 4 acts_upstream_of_or_within ISO (PMID:16816390) RGD PMID:16816390 NCBI chr 7:8,546,312...8,559,838
Ensembl chr 7:8,546,312...8,559,808 		JBrowse link
G Plscr1 phospholipid scramblase 1 acts_upstream_of_or_within ISO (PMID:12509439) RGD PMID:12509439 NCBI chr 8:92,784,279...92,804,698
Ensembl chr 8:92,784,356...92,804,692 		JBrowse link
G Rad9a RAD9 checkpoint clamp component A acts_upstream_of_or_within ISO MGI:2442925 (PMID:15983387) RGD PMID:15983387 NCBI chr 1:201,488,511...201,553,582
Ensembl chr 1:201,487,136...201,553,608 		JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:22510408) RGD PMID:22510408 NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
G Skil SKI-like proto-oncogene acts_upstream_of_or_within ISO MGI:2387096 (PMID:10811619) RGD PMID:10811619 NCBI chr 2:112,247,047...112,275,176
Ensembl chr 2:112,247,051...112,275,080 		JBrowse link
positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212)
(MGI:5882892|PMID:16213212)		 RGD PMID:16213212 MGI:5882892 NCBI chr10:53,610,836...53,613,966
Ensembl chr10:53,610,421...53,613,966 		JBrowse link
G Steap3 STEAP3 metalloreductase acts_upstream_of_or_within ISO MGI:4398911 (PMID:18617898) RGD PMID:18617898 NCBI chr13:31,351,954...31,397,344
Ensembl chr13:31,351,954...31,396,519 		JBrowse link
G Tp73 tumor protein p73 acts_upstream_of_or_within ISO MGI:2442925|MGI:98834 (PMID:15983387) RGD PMID:15983387 NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128 		JBrowse link
positive regulation of mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac10 histone deacetylase 10 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:26221039)		 UniProt
Ensembl
RGD		 PMID:26221039 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:120,199,126...120,205,850
Ensembl chr 7:120,199,129...120,204,228 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:15014079) RGD PMID:15014079 NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Prkcg protein kinase C, gamma involved_in ISO (PMID:15808853) RGD PMID:15808853 NCBI chr 1:65,832,851...65,860,676
Ensembl chr 1:65,832,855...65,859,384 		JBrowse link
positive regulation of mitotic DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO (PMID:15342622) RGD PMID:15342622 NCBI chr 3:57,130,539...57,289,943
Ensembl chr 3:57,130,551...57,289,626 		JBrowse link
positive regulation of single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISO UniProtKB:P18887 (PMID:28002403)
UniProtKB:Q60596 (MGI:5902647|PMID:28002403)		 RGD PMID:28002403 MGI:5902647 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO UniProtKB:P09874 (PMID:28002403)
UniProtKB:P11103 (MGI:5902647|PMID:28002403)		 RGD PMID:28002403 MGI:5902647 NCBI chr 1:80,140,495...80,168,705
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
positive regulation of telomere maintenance in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin-like 6A involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 2:115,492,374...115,508,401
Ensembl chr 2:115,492,285...115,508,401 		JBrowse link
G Actr5 actin related protein 5 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 3:147,282,461...147,295,870
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Actr8 actin related protein 8 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr16:5,164,131...5,186,353
Ensembl chr16:5,164,129...5,178,577 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ino80b INO80 complex subunit B involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 4:115,627,907...115,631,069
Ensembl chr 4:115,627,908...115,631,456 		JBrowse link
G Ino80c INO80 complex subunit C involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr18:15,378,764...15,398,574
Ensembl chr18:15,378,770...15,393,403 		JBrowse link
G Ino80d INO80 complex subunit D involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 9:64,447,075...64,514,013
Ensembl chr 9:64,457,165...64,515,242 		JBrowse link
G Ino80e INO80 complex subunit E involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 1:181,461,406...181,472,059
Ensembl chr 1:181,461,408...181,472,469 		JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 7:130,383,853...130,392,667
Ensembl chr 7:130,383,853...130,392,685 		JBrowse link
G Nfrkb nuclear factor related to kappa B binding protein involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 8:29,831,802...29,863,360
Ensembl chr 8:29,831,812...29,863,359 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Tfpt TCF3 fusion partner involved_in IEA
ISO		 GO_REF:0000107
(MGI:5638510|PMID:23979016)		 Ensembl
RGD		 PMID:23979016 GO_REF:0000107 MGI:5638510 NCBI chr 1:65,587,633...65,597,407
Ensembl chr 1:65,582,359...65,611,689 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr13:55,520,722...55,556,503
Ensembl chr13:55,520,729...55,556,502 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 6:127,706,739...127,736,499
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
postreplication repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07067339.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 8:96,977,420...96,977,861 JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO
IEA		 (PMID:17349954)
GO_REF:0000107		 RGD
Ensembl		 PMID:17349954 GO_REF:0000107 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G ENSRNOG00000064433 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 9:21,357,764...21,358,219 JBrowse link
G ENSRNOG00000067007 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr14:4,704,512...4,705,318 JBrowse link
G ENSRNOG00000068565 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr20:35,389,879...35,390,324 JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
MGI:1858055 (PMID:7628020)
GO_REF:0000024
(PMID:7923193)		 Ensembl
RGD
UniProt		 PMID:7628020 PMID:7923193 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Polh DNA polymerase eta acts_upstream_of_or_within ISO (PMID:10871396) RGD PMID:10871396 NCBI chr 9:14,778,355...14,813,210
Ensembl chr 9:14,777,888...14,812,723 		JBrowse link
G Rad18 RAD18 E3 ubiquitin protein ligase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:145,735,654...145,821,102
Ensembl chr 4:145,735,654...145,821,069 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B involved_in ISO
IEA		 (PMID:14981545)
GO_REF:0000107		 RGD
Ensembl		 PMID:14981545 GO_REF:0000107 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO
IBA		 (PMID:17349954)
GO_REF:0000033		 RGD
GO_Central		 PMID:17349954 GO_REF:0000033 NCBI chr 7:30,154,330...30,184,373
Ensembl chr 7:30,154,616...30,184,355 		JBrowse link
G Ube2v1 ubiquitin conjugating enzyme E2 V1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:156,317,339...156,340,198
Ensembl chr 3:156,316,781...156,340,273 		JBrowse link
G Ube2v1l1 ubiquitin conjugating enzyme E2 V1 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:4,703,243...4,704,962
Ensembl chr 3:156,316,781...156,340,273 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr11:85,304,528...85,338,430
Ensembl chr11:85,304,526...85,336,369 		JBrowse link
protection from non-homologous end joining at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor involved_in ISO
IEA		 (MGI:3829120|PMID:18185984)
GO_REF:0000107		 RGD
Ensembl		 PMID:18185984 GO_REF:0000107 MGI:3829120 NCBI chr19:33,586,739...33,589,481
Ensembl chr19:33,586,745...33,589,461 		JBrowse link
G Dclre1b DNA cross-link repair 1B involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:4462732|PMID:20551906), (MGI:4830207|PMID:20619712)
GO_REF:0000024
(PMID:16730175), (PMID:20479256)		 Ensembl
RGD
UniProt		 PMID:16730175 PMID:20479256 PMID:20551906 PMID:20619712 GO_REF:0000024 GO_REF:0000107 MGI:4462732 MGI:4830207 NCBI chr 2:191,309,909...191,318,399
Ensembl chr 2:191,309,913...191,318,423 		JBrowse link
G Nbn nibrin involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:6269043|PMID:28216226)
(PMID:28216226)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:28216226 GO_REF:0000024 GO_REF:0000107 MGI:6269043 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Pot1b protection of telomeres 1B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 9:9,670,355...9,728,624
Ensembl chr 9:9,670,362...9,728,532 		JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in
acts_upstream_of_or_within		 ISO
IBA		 ComplexPortal:CPX-1993 (PMID:14690602), (PMID:17499040), (PMID:24095731)
MGI:3619525 (PMID:15968270)
GO_REF:0000033
(MGI:4830207|PMID:20619712), (MGI:5883205|PMID:24120135)		 RGD
GO_Central		 PMID:14690602 PMID:15968270 PMID:17499040 PMID:20619712 PMID:24095731 More... GO_REF:0000033 MGI:4830207 MGI:5883205 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819 		JBrowse link
G Terf2ip TERF2 interacting protein NOT|involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(MGI:4440768|PMID:20339076), (MGI:4839412|PMID:20622869)		 UniProt
GO_Central
RGD		 PMID:20339076 PMID:20622869 GO_REF:0000024 GO_REF:0000033 MGI:4440768 MGI:4839412 NCBI chr19:39,976,965...39,984,055
Ensembl chr19:39,976,906...39,984,064 		JBrowse link
protein-DNA covalent cross-linking repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting helicase 1 involved_in ISO (PMID:36608669) RGD PMID:36608669 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Fam111a FAM111 trypsin like peptidase A involved_in ISO (PMID:32165630) RGD PMID:32165630 NCBI chr 1:209,640,865...209,656,551
Ensembl chr 1:209,640,953...209,656,547 		JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in ISS
ISO		 GO_REF:0000024
(PMID:37519246), (PMID:37950866)		 UniProt
RGD		 PMID:37519246 PMID:37950866 GO_REF:0000024 NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Sprtn SprT-like N-terminal domain involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:27852435), (PMID:27871365), (PMID:27871366), (PMID:32152270), (PMID:32649882), (PMID:36608669)
GO_REF:0000107
(MGI:5922101|PMID:28199696)		 UniProt
RGD
Ensembl		 PMID:27852435 PMID:27871365 PMID:27871366 PMID:28199696 PMID:32152270 More... GO_REF:0000024 GO_REF:0000107 MGI:5922101 NCBI chr19:52,857,612...52,864,864
Ensembl chr19:52,857,866...52,864,864 		JBrowse link
G Tex264 testis expressed 264 involved_in ISO
IBA		 (PMID:32152270)
GO_REF:0000033		 RGD
GO_Central		 PMID:32152270 GO_REF:0000033 NCBI chr 8:107,295,806...107,322,858
Ensembl chr 8:107,295,806...107,323,232 		JBrowse link
G Vcp valosin-containing protein involved_in ISO
ISS		 (PMID:32152270)
GO_REF:0000024		 RGD
UniProt		 PMID:32152270 GO_REF:0000024 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Vcpip1 valosin containing protein interacting protein 1 involved_in ISO
ISS		 (PMID:32649882)
GO_REF:0000024		 RGD
UniProt		 PMID:32649882 GO_REF:0000024 NCBI chr 5:9,534,247...9,560,889
Ensembl chr 5:9,534,129...9,562,040 		JBrowse link
pyrimidine dimer repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddb2 damage specific DNA binding protein 2 acts_upstream_of_or_within ISO MGI:3511965 (PMID:15558025) RGD PMID:15558025 NCBI chr 3:77,185,114...77,207,650
Ensembl chr 3:77,185,109...77,207,631 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO MGI:1932102 (PMID:9150142) RGD PMID:9150142 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Polb DNA polymerase beta IDA RGD PMID:12388548 RGD:633643 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812 		JBrowse link
G Polh DNA polymerase eta acts_upstream_of_or_within ISO (PMID:10871396) RGD PMID:10871396 NCBI chr 9:14,778,355...14,813,210
Ensembl chr 9:14,777,888...14,812,723 		JBrowse link
pyrimidine dimer repair by nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO (PMID:10454634) RGD PMID:10454634 NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO MGI:3590648 (PMID:12660172) RGD PMID:12660172 NCBI chr11:35,422,328...35,428,247
Ensembl chr11:35,422,328...35,428,254 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO
IEA		 (PMID:21149730)
GO_REF:0000107
(MGI:5298332|PMID:21149730)		 RGD
Ensembl		 PMID:21149730 GO_REF:0000107 MGI:5298332 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within ISO MGI:1931883 (PMID:17049932) RGD PMID:17049932 NCBI chr 4:123,993,670...124,020,922
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
recombinational interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor involved_in ISO (PMID:23401855) RGD PMID:23401855 NCBI chr 3:120,086,741...120,117,008
Ensembl chr 3:120,086,763...120,117,008 		JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in ISO
IEA		 (PMID:23401855)
GO_REF:0000107
(MGI:5525985|PMID:23401855)		 RGD
Ensembl		 PMID:23401855 GO_REF:0000107 MGI:5525985 NCBI chr20:32,818,219...32,929,577
Ensembl chr20:32,844,951...32,929,600 		JBrowse link
recombinational repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrob homologous recombination factor with OB-fold involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:87,206,017...87,222,483
Ensembl chr10:87,206,049...87,222,483 		JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISO
IEA
IBA		 (PMID:21659603)
GO_REF:0000118
GO_REF:0000033		 RGD
TreeGrafter
GO_Central		 PMID:21659603 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:161,634,047...161,639,437
Ensembl chr 4:161,634,048...161,639,371 		JBrowse link
G Zgrf1 zinc finger, GRF-type containing 1 involved_in ISO (PMID:32640219) RGD PMID:32640219 NCBI chr 2:216,012,911...216,075,608
Ensembl chr 2:216,013,005...216,074,750 		JBrowse link
regulation of base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISO (PMID:34102106) RGD PMID:34102106 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
regulation of DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5567851|PMID:24489120)		 UniProt
RGD		 PMID:24489120 GO_REF:0000024 MGI:5567851 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Cul4a cullin 4A acts_upstream_of_or_within ISO MGI:3851025 (PMID:19481525) RGD PMID:19481525 NCBI chr16:76,385,298...76,422,316
Ensembl chr16:76,384,546...76,422,330 		JBrowse link
G ENSRNOG00000069571 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr  X:34,530,495...34,531,833 JBrowse link
G Etaa1 ETAA1 activator of ATR kinase involved_in ISO
IBA		 (PMID:27723717), (PMID:27723720)
GO_REF:0000033		 RGD
GO_Central		 PMID:27723717 PMID:27723720 GO_REF:0000033 NCBI chr14:92,298,461...92,314,044
Ensembl chr14:92,299,553...92,314,104 		JBrowse link
G Fbxo4 F-box protein 4 acts_upstream_of_or_within ISO MGI:5301830 (PMID:21911473) RGD PMID:21911473 NCBI chr 2:53,174,798...53,187,792
Ensembl chr 2:53,174,798...53,187,792 		JBrowse link
G Fem1b fem-1 homolog B involved_in ISS
ISO		 GO_REF:0000024
(PMID:19330022)		 UniProt
RGD		 PMID:19330022 GO_REF:0000024 NCBI chr 8:63,265,301...63,278,577
Ensembl chr 8:63,265,301...63,278,577 		JBrowse link
G Nek1 NIMA-related kinase 1 involved_in ISO (MGI:5619475|PMID:18843199) RGD PMID:18843199 MGI:5619475 NCBI chr16:28,998,229...29,125,426
Ensembl chr16:28,998,231...29,117,723 		JBrowse link
G Rfwd3 ring finger and WD repeat domain 3 involved_in ISO (PMID:21504906) RGD PMID:21504906 NCBI chr19:39,235,883...39,268,479
Ensembl chr19:39,236,787...39,268,479 		JBrowse link
G Rnaseh2b ribonuclease H2, subunit B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4432164 (PMID:22802351)		 Ensembl
RGD		 PMID:22802351 GO_REF:0000107 NCBI chr15:36,541,200...36,592,016
Ensembl chr15:36,541,218...36,584,118 		JBrowse link
G Rpa2 replication protein A2 involved_in ISO
ISS		 (PMID:21504906)
GO_REF:0000024		 RGD
UniProt		 PMID:21504906 GO_REF:0000024 NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Wdr76 WD repeat domain 76 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:108,456,784...108,491,528
Ensembl chr 3:108,456,815...108,490,840 		JBrowse link
regulation of DNA damage response, signal transduction by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07010705.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:142,289,467...142,290,623 JBrowse link
G AABR07033047.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr11:3,479,411...3,480,543 JBrowse link
G ENSRNOG00000067141 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr10:31,086,733...31,087,921 JBrowse link
G Kmt5a lysine methyltransferase 5A involved_in ISO
IBA		 (PMID:17707234)
GO_REF:0000033		 RGD
GO_Central		 PMID:17707234 GO_REF:0000033 NCBI chr12:32,139,353...32,167,777
Ensembl chr12:32,139,178...32,162,711 		JBrowse link
G Kmt5al2 lysine methyltransferase 5A like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:92,178,344...92,180,517
Ensembl chr  X:92,178,016...92,179,731 		JBrowse link
G Npm1 nucleophosmin 1 acts_upstream_of_or_within ISO MGI:98834 (PMID:16199867) RGD PMID:16199867 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645 		JBrowse link
G Smyd2 SET and MYND domain containing 2 involved_in ISO
ISS		 (PMID:17108971)
GO_REF:0000024		 RGD
UniProt		 PMID:17108971 GO_REF:0000024 NCBI chr13:101,425,270...101,466,576
Ensembl chr13:101,425,273...101,466,576 		JBrowse link
G Sox4 SRY-box transcription factor 4 involved_in ISO (PMID:19234109) RGD PMID:19234109 NCBI chr17:35,667,809...35,672,515
Ensembl chr17:35,667,537...35,673,665 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1890508 (PMID:21522133)		 Ensembl
RGD		 PMID:21522133 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033|MGI:98834 (PMID:16079796), (PMID:21522133) RGD PMID:16079796 PMID:21522133 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110 		JBrowse link
regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cops3 COP9 signalosome subunit 3 involved_in ISO (PMID:15861129) RGD PMID:15861129 NCBI chr10:44,618,115...44,652,807
Ensembl chr10:44,618,115...44,641,597 		JBrowse link
regulation of DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Helb DNA helicase B involved_in ISO (PMID:26774285)
(MGI:5766842|PMID:26774285)		 RGD PMID:26774285 MGI:5766842 NCBI chr 7:55,588,510...55,615,979
Ensembl chr 7:55,588,798...55,615,585 		JBrowse link
regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin-like 6A involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 2:115,492,374...115,508,401
Ensembl chr 2:115,492,285...115,508,401 		JBrowse link
G Actr5 actin related protein 5 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 3:147,282,461...147,295,870
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Actr8 actin related protein 8 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr16:5,164,131...5,186,353
Ensembl chr16:5,164,129...5,178,577 		JBrowse link
G Cdk9 cyclin-dependent kinase 9 involved_in ISO
IEA		 (PMID:20493174)
GO_REF:0000107		 RGD
Ensembl		 PMID:20493174 GO_REF:0000107 NCBI chr 3:15,996,467...16,001,315
Ensembl chr 3:15,996,468...16,002,410 		JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within ISO MGI:3773690 (PMID:20467439) RGD PMID:20467439 NCBI chr20:2,928,378...2,929,582
Ensembl chr20:2,928,378...2,929,583 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Ino80b INO80 complex subunit B involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 4:115,627,907...115,631,069
Ensembl chr 4:115,627,908...115,631,456 		JBrowse link
G Ino80c INO80 complex subunit C involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr18:15,378,764...15,398,574
Ensembl chr18:15,378,770...15,393,403 		JBrowse link
G Ino80d INO80 complex subunit D involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 9:64,447,075...64,514,013
Ensembl chr 9:64,457,165...64,515,242 		JBrowse link
G Ino80e INO80 complex subunit E involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 1:181,461,406...181,472,059
Ensembl chr 1:181,461,408...181,472,469 		JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 7:130,383,853...130,392,667
Ensembl chr 7:130,383,853...130,392,685 		JBrowse link
G Nfrkb nuclear factor related to kappa B binding protein involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 8:29,831,802...29,863,360
Ensembl chr 8:29,831,812...29,863,359 		JBrowse link
G Parg poly (ADP-ribose) glycohydrolase involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033
GO_REF:0000118		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr16:7,436,429...7,544,276
Ensembl chr16:7,436,476...7,544,273 		JBrowse link
G Phf13 PHD finger protein 13 involved_in ISO (PMID:23034801) RGD PMID:23034801 NCBI chr 5:162,494,574...162,501,350
Ensembl chr 5:162,494,573...162,501,350 		JBrowse link
G Radx RPA1 related single stranded DNA binding protein, X-linked involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:103,089,284...103,176,840
Ensembl chr  X:103,089,284...103,176,838 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Sgf29 SAGA complex associated factor 29 involved_in IEA
ISO		 GO_REF:0000107
(PMID:35210392)		 Ensembl
RGD		 PMID:35210392 GO_REF:0000107 NCBI chr 1:181,238,458...181,271,931
Ensembl chr 1:181,238,468...181,274,781 		JBrowse link
G Sirt7 sirtuin 7 involved_in ISO (PMID:30944854) RGD PMID:30944854 NCBI chr10:105,896,476...105,903,301
Ensembl chr10:105,896,476...105,903,172 		JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:2445449 (PMID:23695662) RGD PMID:23695662 NCBI chr  X:14,421,028...14,433,993
Ensembl chr  X:14,421,109...14,433,982 		JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 acts_upstream_of_or_within ISO MGI:2445449 (PMID:23695662) RGD PMID:23695662 NCBI chr  X:141,792,589...141,795,257 JBrowse link
G Tfpt TCF3 fusion partner involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 1:65,587,633...65,597,407
Ensembl chr 1:65,582,359...65,611,689 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr13:55,520,722...55,556,503
Ensembl chr13:55,520,729...55,556,502 		JBrowse link
G Usp1 ubiquitin specific peptidase 1 involved_in ISO
ISS		 (PMID:18082604)
GO_REF:0000024		 RGD
UniProt		 PMID:18082604 GO_REF:0000024 NCBI chr 5:113,587,564...113,598,934
Ensembl chr 5:113,587,564...113,598,932 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (MGI:5638510|PMID:23979016) RGD PMID:23979016 MGI:5638510 NCBI chr 6:127,706,739...127,736,499
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dek DEK proto-oncogene acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:21653549)
GO_REF:0000033		 RGD
GO_Central		 PMID:21653549 GO_REF:0000033 NCBI chr17:17,580,804...17,602,825
Ensembl chr17:17,580,843...17,602,808 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:21639834) RGD PMID:21639834 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit involved_in ISO (PMID:18614045) RGD PMID:18614045 NCBI chr 1:181,392,899...181,399,703
Ensembl chr 1:181,392,923...181,399,659 		JBrowse link
G Ppp4r2 protein phosphatase 4, regulatory subunit 2 involved_in ISO (PMID:18614045) RGD PMID:18614045 NCBI chr 4:133,454,555...133,495,486
Ensembl chr 4:133,454,555...133,495,486 		JBrowse link
G Ppp4r3b protein phosphatase 4, regulatory subunit 3B involved_in ISO (PMID:18614045) RGD PMID:18614045 NCBI chr14:102,917,043...102,965,210
Ensembl chr14:102,917,443...103,068,192 		JBrowse link
regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek1 checkpoint kinase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:15665856)		 UniProt
RGD		 PMID:15665856 GO_REF:0000024 NCBI chr 8:36,420,565...36,443,477
Ensembl chr 8:36,420,569...36,441,009 		JBrowse link
G Fignl1 fidgetin-like 1 involved_in ISO
ISS		 (PMID:23754376)
GO_REF:0000024		 RGD
UniProt		 PMID:23754376 GO_REF:0000024 NCBI chr14:86,368,670...86,381,728
Ensembl chr14:86,368,675...86,377,455 		JBrowse link
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within ISO (PMID:24217620) RGD PMID:24217620 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319 		JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:20154705)		 Ensembl
UniProt
RGD		 PMID:20154705 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:181,392,899...181,399,703
Ensembl chr 1:181,392,923...181,399,659 		JBrowse link
G Ppp4r2 protein phosphatase 4, regulatory subunit 2 involved_in ISO (PMID:20154705) RGD PMID:20154705 NCBI chr 4:133,454,555...133,495,486
Ensembl chr 4:133,454,555...133,495,486 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:23754376) RGD PMID:23754376 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO (PMID:23754376) RGD PMID:23754376 NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524 		JBrowse link
G Rpa2 replication protein A2 involved_in ISO
ISS		 (PMID:20154705)
GO_REF:0000024		 RGD
UniProt		 PMID:20154705 GO_REF:0000024 NCBI chr 5:144,976,789...144,989,445
Ensembl chr 5:144,976,748...144,987,350 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000104
(PMID:18957201)		 UniProt
GO_Central
RGD		 PMID:18957201 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in ISO (PMID:24843002) RGD PMID:24843002 NCBI chr 8:110,511,808...110,597,475
Ensembl chr 8:110,511,772...110,597,489 		JBrowse link
G Shld2 shieldin complex subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:9,544,940...9,640,323
Ensembl chr16:9,548,660...9,639,965 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:19135889), (PMID:22753495) RGD PMID:19135889 PMID:22753495 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO (PMID:23754376) RGD PMID:23754376 NCBI chr11:84,766,593...85,007,597
Ensembl chr11:84,766,593...85,007,600 		JBrowse link
G Terf2ip TERF2 interacting protein involved_in ISS
ISO		 GO_REF:0000024
(MGI:4440768|PMID:20339076)		 UniProt
RGD		 PMID:20339076 GO_REF:0000024 MGI:4440768 NCBI chr19:39,976,965...39,984,055
Ensembl chr19:39,976,906...39,984,064 		JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3526165 (PMID:18283110)		 GO_Central
RGD		 PMID:18283110 GO_REF:0000033 NCBI chr16:58,598,991...58,659,005
Ensembl chr16:58,598,989...58,658,467 		JBrowse link
G Usp51 ubiquitin specific peptidase 51 involved_in ISO (PMID:27083998) RGD PMID:27083998 NCBI chr  X:18,374,940...18,381,472
Ensembl chr  X:18,376,930...18,379,888 		JBrowse link
G Zfp365 zinc finger protein 365 involved_in ISS
IBA
IEA		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107		 UniProt
GO_Central
TreeGrafter
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr20:20,666,240...20,689,734
Ensembl chr20:20,666,240...20,691,238 		JBrowse link
regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 NOT|involved_in ISS
ISO		 GO_REF:0000024
(PMID:29925947)		 UniProt
RGD		 PMID:29925947 GO_REF:0000024 NCBI chr14:94,296,443...94,333,735
Ensembl chr14:94,296,443...94,340,524 		JBrowse link
G Dek DEK proto-oncogene involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3838711 (PMID:21653549)		 Ensembl
RGD		 PMID:21653549 GO_REF:0000107 NCBI chr17:17,580,804...17,602,825
Ensembl chr17:17,580,843...17,602,808 		JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO (PMID:27568553) RGD PMID:27568553 NCBI chr10:34,501,359...34,525,474
Ensembl chr10:34,501,384...34,525,469 		JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within ISO (PMID:23241889) RGD PMID:23241889 NCBI chr14:76,833,179...76,911,304
Ensembl chr14:76,835,637...76,913,641 		JBrowse link
G Pot1 protection of telomeres 1 involved_in ISO (PMID:29227966) RGD PMID:29227966 NCBI chr 4:54,205,330...54,263,137
Ensembl chr 4:54,205,332...54,263,042 		JBrowse link
G Usp51 ubiquitin specific peptidase 51 involved_in ISO (PMID:27083998) RGD PMID:27083998 NCBI chr  X:18,374,940...18,381,472
Ensembl chr  X:18,376,930...18,379,888 		JBrowse link
G Was WASP actin nucleation promoting factor NOT|involved_in ISO (PMID:29925947) RGD PMID:29925947 NCBI chr  X:14,405,105...14,413,850
Ensembl chr  X:14,405,124...14,413,849 		JBrowse link
regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpk heterogeneous nuclear ribonucleoprotein K involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:20673990)		 Ensembl
RGD		 PMID:20673990 GO_REF:0000107 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997 		JBrowse link
G LOC100359916 heterogeneous nuclear ribonucleoprotein K-like involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:58,668,326...58,670,222
Ensembl chr 5:58,668,327...58,670,220 		JBrowse link
regulation of mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 involved_in ISO
IEA		 (PMID:11017067)
GO_REF:0000107		 RGD
Ensembl		 PMID:11017067 GO_REF:0000107 NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231 		JBrowse link
regulation of nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul4a cullin 4A acts_upstream_of_or_within ISO MGI:3851025 (PMID:19481525) RGD PMID:19481525 NCBI chr16:76,385,298...76,422,316
Ensembl chr16:76,384,546...76,422,330 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:3807115|PMID:18650382) RGD PMID:18650382 MGI:3807115 NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO
ISS		 (PMID:28719581)
GO_REF:0000024		 RGD
UniProt		 PMID:28719581 GO_REF:0000024 NCBI chr10:80,221,519...80,255,590
Ensembl chr10:80,221,524...80,255,567 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein acts_upstream_of_or_within ISO (PMID:19506022) RGD PMID:19506022 NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
regulation of single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp1 poly (ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:25378300) RGD PMID:25378300 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
regulation of transcription-coupled nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO (PMID:16916636), (PMID:17297471) RGD PMID:16916636 PMID:17297471 NCBI chr 2:39,647,393...39,686,229
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
replication-born double-strand break repair via sister chromatid exchange term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:25597246) RGD PMID:25597246 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Fancb FA complementation group B involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:25520194)		 GO_Central
RGD		 PMID:25520194 GO_REF:0000033 NCBI chr  X:29,403,771...29,420,484
Ensembl chr  X:29,403,771...29,420,192 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Rad21 RAD21 cohesin complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:83,287,867...83,314,810
Ensembl chr 7:83,287,870...83,314,817 		JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:140,160,128...140,188,324
Ensembl chr 3:140,160,118...140,188,298 		JBrowse link
G Rad51 RAD51 recombinase acts_upstream_of_or_within ISO MGI:5444025|MGI:5444027 (PMID:22778135) RGD PMID:22778135 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rec8 REC8 meiotic recombination protein involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr15:29,109,862...29,117,327
Ensembl chr15:29,109,863...29,117,326 		JBrowse link
G Recql5 RecQ like helicase 5 acts_upstream_of_or_within ISO (PMID:25520194) RGD PMID:25520194 NCBI chr10:101,126,544...101,165,739
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO (PMID:28002403) RGD PMID:28002403 NCBI chr 1:80,140,495...80,168,705
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
signal transduction in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (PMID:15657060), (PMID:18280240), (PMID:9037071) RGD PMID:9037071 PMID:15657060 PMID:18280240 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065 		JBrowse link
G Atad5 ATPase family, AAA domain containing 5 acts_upstream_of_or_within ISO (PMID:15983387) RGD PMID:15983387 NCBI chr10:65,070,682...65,118,489
Ensembl chr10:65,070,689...65,117,845 		JBrowse link
G Atm ATM serine/threonine kinase involved_in ISO (PMID:26774286), (PMID:27664052) RGD PMID:26774286 PMID:27664052 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Casp9 caspase 9 involved_in ISO (PMID:15657060) RGD PMID:15657060 NCBI chr 5:154,108,872...154,126,628
Ensembl chr 5:154,109,046...154,126,626 		JBrowse link
G Cep63 centrosomal protein 63 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:103,162,639...103,214,177
Ensembl chr 8:103,162,700...103,214,177 		JBrowse link
G Chek1 checkpoint kinase 1 involved_in IMP
ISO		 (PMID:16963448) RGD PMID:16963448 PMID:11278490 RGD:2316109 NCBI chr 8:36,420,565...36,443,477
Ensembl chr 8:36,420,569...36,441,009 		JBrowse link
G Chek2 checkpoint kinase 2 acts_upstream_of_or_within
involved_in		 ISO (PMID:14744935)
(PMID:11298456)		 RGD PMID:11298456 PMID:14744935 NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO
ISS		 (MGI:5567851|PMID:24489120)
GO_REF:0000024		 RGD
UniProt		 PMID:24489120 GO_REF:0000024 MGI:5567851 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Gadd45a growth arrest and DNA-damage-inducible, alpha involved_in IEA
ISO		 GO_REF:0000107
(PMID:20160708)		 Ensembl
RGD		 PMID:20160708 GO_REF:0000107 NCBI chr 4:96,154,789...96,157,091
Ensembl chr 4:96,154,789...96,157,115 		JBrowse link
G Grb2 growth factor receptor bound protein 2 involved_in ISO
IEA		 (PMID:20160708)
GO_REF:0000107		 RGD
Ensembl		 PMID:20160708 GO_REF:0000107 NCBI chr10:100,881,404...100,949,193
Ensembl chr10:100,869,718...100,949,309 		JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in ISO (PMID:20160708) RGD PMID:20160708 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589 		JBrowse link
G Mapk3 mitogen activated protein kinase 3 involved_in ISO (PMID:17560175) RGD PMID:17560175 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO (MGI:3835231|PMID:19015238) RGD PMID:19015238 MGI:3835231 NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491 		JBrowse link
G Wnt1 Wnt family member 1 involved_in ISO (PMID:16501043) RGD PMID:16501043 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010 		JBrowse link
single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplf aprataxin and PNKP like factor involved_in ISO (PMID:17396150) RGD PMID:17396150 NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633 		JBrowse link
G Aptx aprataxin involved_in ISO
IBA
IEA		 (PMID:14755728)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
(PMID:15044383), (PMID:17519253)
(MGI:3665365|PMID:16964241)		 RGD
GO_Central
TreeGrafter
Ensembl		 PMID:14755728 PMID:15044383 PMID:16964241 PMID:17519253 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:3665365 NCBI chr 5:55,798,896...55,822,963
Ensembl chr 5:55,800,248...55,822,855 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:29545921) RGD PMID:29545921 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO (PMID:29545921) RGD PMID:29545921 NCBI chr 2:39,647,393...39,686,229
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
G Lig4 DNA ligase 4 involved_in ISO (PMID:8798671) RGD PMID:8798671 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:20097625) RGD PMID:20097625 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Tdp1 tyrosyl-DNA phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:15811850), (PMID:17600775)
MGI:3818340 (PMID:17914460), (PMID:17948061)
GO_REF:0000107		 RGD
Ensembl		 PMID:15811850 PMID:17600775 PMID:17914460 PMID:17948061 GO_REF:0000107 NCBI chr 6:119,163,192...119,231,029
Ensembl chr 6:119,163,166...119,231,021 		JBrowse link
G Tnp1 transition protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:12743712)		 UniProt
RGD		 PMID:12743712 GO_REF:0000024 NCBI chr 9:74,594,463...74,595,072
Ensembl chr 9:74,594,466...74,595,274 		JBrowse link
G Trpc2 transient receptor potential cation channel subfamily C member 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:156,460,009...156,473,039
Ensembl chr 1:156,440,305...156,473,073 		JBrowse link
G Xndc1 Xrcc1 N-terminal domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:156,440,284...156,460,609 JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:80,140,495...80,168,705
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
telomere maintenance in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk2 cyclin dependent kinase 2 involved_in ISO (PMID:28216226) RGD PMID:28216226 NCBI chr 7:1,129,878...1,137,431
Ensembl chr 7:1,129,811...1,137,403 		JBrowse link
G Nbn nibrin involved_in ISS
ISO		 GO_REF:0000024
(MGI:6269043|PMID:28216226)
(PMID:28216226)		 UniProt
RGD		 PMID:28216226 GO_REF:0000024 MGI:6269043 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISO (PMID:28216226) RGD PMID:28216226 NCBI chr 1:201,485,117...201,488,734
Ensembl chr 1:201,485,085...201,497,327 		JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO (PMID:15583028) RGD PMID:15583028 NCBI chr 3:36,554,689...36,607,961
Ensembl chr 3:36,554,697...36,603,617 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO (MGI:5645200|PMID:22579284) RGD PMID:22579284 MGI:5645200 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
telomere maintenance via base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISO
IEA		 (PMID:24703901)
GO_REF:0000107		 RGD
Ensembl		 PMID:24703901 GO_REF:0000107 NCBI chr15:24,144,595...24,146,785
Ensembl chr15:24,144,362...24,146,785 		JBrowse link
transcription-coupled nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in ISO (PMID:8663148) RGD PMID:8663148 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO (PMID:8663148) RGD PMID:8663148 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329 		JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:16246722) RGD PMID:16246722 NCBI chr 9:46,309,477...46,354,478
Ensembl chr 9:46,309,389...46,354,472 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within
involved_in		 IMP
ISO
IBA		 MGI:1932102 (PMID:12509265), (PMID:9150142)
GO_REF:0000033
(PMID:10564257), (PMID:26620705)		 RGD
GO_Central		 PMID:9150142 PMID:10564257 PMID:12509265 PMID:26620705 PMID:31644904 GO_REF:0000033, RGD:126925983 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Ercc6l ERCC excision repair 6 like, spindle assembly checkpoint helicase involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr  X:67,245,414...67,261,222
Ensembl chr  X:67,245,414...67,280,756 		JBrowse link
G Ercc6l2 ERCC excision repair 6 like 2 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr17:1,076,486...1,311,281
Ensembl chr17:1,216,428...1,310,275 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:12732143)
GO_REF:0000033		 RGD
GO_Central		 PMID:12732143 GO_REF:0000033 NCBI chr 2:39,647,393...39,686,229
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO MGI:3590648 (PMID:12660172) RGD PMID:12660172 NCBI chr11:35,422,328...35,428,247
Ensembl chr11:35,422,328...35,428,254 		JBrowse link
G Polr2i RNA polymerase II subunit I involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:85,483,515...85,484,952
Ensembl chr 1:85,483,515...85,484,952 		JBrowse link
G Rad54b RAD54 homolog B involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 5:25,032,112...25,104,630
Ensembl chr 5:25,032,066...25,104,616 		JBrowse link
G Rad54l RAD54 like involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 5:129,575,431...129,605,100
Ensembl chr 5:129,575,378...129,605,070 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22466612)		 UniProt
Ensembl
RGD		 PMID:22466612 GO_REF:0000024 GO_REF:0000107 NCBI chr10:6,880,684...6,925,355
Ensembl chr10:6,828,795...6,925,355 		JBrowse link
G Uvssa UV-stimulated scaffold protein A involved_in ISO
IBA
IEA
ISS		 (PMID:22466610), (PMID:22466611), (PMID:22466612)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:22466610 PMID:22466611 PMID:22466612 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:77,309,188...77,351,922
Ensembl chr14:77,314,056...77,351,903 		JBrowse link
G Xab2 XPA binding protein 2 involved_in ISO
IEA
ISS		 (PMID:10944529)
GO_REF:0000107		 RGD
Ensembl		 PMID:10944529 PMID:10944529 GO_REF:0000107, RGD:8554289 NCBI chr12:1,667,672...1,679,702
Ensembl chr12:1,667,672...1,679,692 		JBrowse link
translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dtl denticleless E3 ubiquitin protein ligase homolog involved_in ISO (PMID:20129063) RGD PMID:20129063 NCBI chr13:103,115,810...103,155,029
Ensembl chr13:103,117,186...103,154,890 		JBrowse link
G Faap20 FA core complex associated protein 20 involved_in ISO
ISS		 (PMID:22266823)
GO_REF:0000024		 RGD
UniProt		 PMID:22266823 GO_REF:0000024 NCBI chr 5:165,808,370...165,815,291
Ensembl chr 5:165,808,657...165,815,333 		JBrowse link
G LOC100363428 PCNA-associated factor-like involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr15:84,610,314...84,612,236 JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 involved_in ISO (PMID:24695737) RGD PMID:24695737 NCBI chr 7:107,949,031...107,958,377
Ensembl chr 7:107,949,043...107,958,304 		JBrowse link
G Pclaf PCNA clamp associated factor involved_in ISO
IBA
IEA
ISS		 (PMID:23000965)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
UniProt		 PMID:23000965 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:66,420,606...66,432,994
Ensembl chr 8:66,420,587...66,432,994
Ensembl chr 8:66,420,587...66,432,994 		JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO
IBA
ISS		 (PMID:20129063)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:20129063 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Poli DNA polymerase iota involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3055735 (PMID:17114294)		 GO_Central
RGD		 PMID:17114294 GO_REF:0000033 NCBI chr18:64,116,774...64,134,373
Ensembl chr18:64,116,774...64,163,418 		JBrowse link
G Poln DNA polymerase nu involved_in ISO (PMID:19908865), (PMID:20102227) RGD PMID:19908865 PMID:20102227 NCBI chr14:76,579,983...76,752,460
Ensembl chr14:76,580,546...76,752,463 		JBrowse link
G Primpol primase and DNA directed polymerase involved_in ISO
IBA		 (PMID:24240614), (PMID:24267451)
GO_REF:0000033		 RGD
GO_Central		 PMID:24240614 PMID:24267451 GO_REF:0000033 NCBI chr16:45,681,252...45,715,758
Ensembl chr16:45,681,326...45,715,565 		JBrowse link
G Sprtn SprT-like N-terminal domain involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:22681887), (PMID:22902628), (PMID:23042605), (PMID:23042607)		 Ensembl
UniProt
RGD		 PMID:22681887 PMID:22902628 PMID:23042605 PMID:23042607 GO_REF:0000024 GO_REF:0000107 NCBI chr19:52,857,612...52,864,864
Ensembl chr19:52,857,866...52,864,864 		JBrowse link
G Vcp valosin-containing protein involved_in ISO
ISS		 (PMID:23042605)
GO_REF:0000024		 RGD
UniProt		 PMID:23042605 GO_REF:0000024 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:24657165) RGD PMID:24657165 NCBI chr 6:95,096,838...95,125,811
Ensembl chr 6:95,096,387...95,118,996 		JBrowse link
UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr5 actin related protein 5 involved_in ISO (PMID:20855601) RGD PMID:20855601 NCBI chr 3:147,282,461...147,295,870
Ensembl chr 3:147,282,624...147,296,110 		JBrowse link
G Cul4b cullin 4B involved_in ISO (PMID:22334663) RGD PMID:22334663 NCBI chr  X:117,287,481...117,326,688
Ensembl chr  X:117,287,484...117,326,688 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:14751237), (PMID:22334663)		 Ensembl
RGD		 PMID:14751237 PMID:22334663 GO_REF:0000107 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676 		JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in ISO (PMID:14751237), (PMID:22334663) RGD PMID:14751237 PMID:22334663 NCBI chr 3:77,185,114...77,207,650
Ensembl chr 3:77,185,109...77,207,631 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963 		JBrowse link
G H2ac25 H2A clustered histone 25 involved_in ISO (PMID:22334663) RGD PMID:22334663 NCBI chr10:43,733,702...43,735,254
Ensembl chr10:43,733,668...43,744,874 		JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:20855601) RGD PMID:20855601 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911 		JBrowse link
G Mc1r melanocortin 1 receptor involved_in ISO (PMID:18292087) RGD PMID:18292087 NCBI chr19:51,452,448...51,455,375
Ensembl chr19:51,453,239...51,454,192 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:20670893) RGD PMID:20670893 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:60,431,673...60,475,726
Ensembl chr 5:60,431,673...60,475,726 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor involved_in ISO (PMID:8077226)
(PMID:22431748)		 RGD PMID:8077226 PMID:22431748 NCBI chr 4:123,993,670...124,020,922
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20413
    response to stimulus 10920
      response to stress 4281
        cellular response to stress 2061
          DNA damage response 891
            DNA repair + 561
            DNA repair-dependent chromatin remodeling 23
            SOS response 0
            broken chromosome clustering 2
            intrinsic apoptotic signaling pathway in response to DNA damage + 117
            signal transduction in response to DNA damage + 191
            telomere maintenance in response to DNA damage + 30
paths to the root