Flywch1 (FLYWCH-type zinc finger 1) - Rat Genome Database

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Gene: Flywch1 (FLYWCH-type zinc finger 1) Rattus norvegicus
Analyze
Symbol: Flywch1
Name: FLYWCH-type zinc finger 1
RGD ID: 1309385
Description: Predicted to enable transcription coactivator binding activity and transcription corepressor activity. Predicted to be involved in DNA damage response and negative regulation of transcription by RNA polymerase II. Predicted to be located in cytosol and nuclear body. Predicted to be part of pericentric heterochromatin and transcription regulator complex. Orthologous to human FLYWCH1 (FLYWCH-type zinc finger 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; amphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: FLYWCH-type zinc finger-containing protein 1; LOC360488; RGD1309385; similar to RIKEN cDNA E030034P13
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81013,279,232 - 13,298,955 (-)NCBIGRCr8
mRatBN7.21012,774,644 - 12,794,373 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1012,774,653 - 12,794,267 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1017,518,924 - 17,539,034 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01017,007,713 - 17,027,823 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01012,507,291 - 12,527,000 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01013,087,925 - 13,107,833 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1013,087,914 - 13,107,771 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01012,907,389 - 12,927,264 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41013,013,234 - 13,036,965 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11013,009,876 - 13,021,779 (-)NCBI
Celera1012,469,943 - 12,489,573 (-)NCBICelera
Cytogenetic Map10q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932  


Genomics

Comparative Map Data
Flywch1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81013,279,232 - 13,298,955 (-)NCBIGRCr8
mRatBN7.21012,774,644 - 12,794,373 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1012,774,653 - 12,794,267 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1017,518,924 - 17,539,034 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01017,007,713 - 17,027,823 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01012,507,291 - 12,527,000 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01013,087,925 - 13,107,833 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1013,087,914 - 13,107,771 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01012,907,389 - 12,927,264 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41013,013,234 - 13,036,965 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11013,009,876 - 13,021,779 (-)NCBI
Celera1012,469,943 - 12,489,573 (-)NCBICelera
Cytogenetic Map10q12NCBI
FLYWCH1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38162,911,931 - 2,951,208 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl162,911,931 - 2,951,208 (+)EnsemblGRCh38hg38GRCh38
GRCh37162,961,932 - 3,001,209 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36162,901,981 - 2,941,210 (+)NCBINCBI36Build 36hg18NCBI36
Celera163,167,373 - 3,206,655 (+)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef162,933,879 - 2,973,694 (+)NCBIHuRef
CHM1_1162,961,929 - 3,001,182 (+)NCBICHM1_1
T2T-CHM13v2.0162,938,537 - 2,977,878 (+)NCBIT2T-CHM13v2.0
Flywch1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391723,971,767 - 23,993,504 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1723,971,767 - 23,990,576 (-)EnsemblGRCm39 Ensembl
GRCm381723,752,795 - 23,774,530 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1723,752,793 - 23,771,602 (-)EnsemblGRCm38mm10GRCm38
MGSCv371723,892,390 - 23,908,558 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361723,483,045 - 23,491,398 (-)NCBIMGSCv36mm8
Celera1724,249,349 - 24,265,342 (-)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1712.04NCBI
Flywch1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544214,386,276 - 14,418,328 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544214,392,901 - 14,419,178 (-)NCBIChiLan1.0ChiLan1.0
FLYWCH1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2183,458,497 - 3,494,400 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1167,236,907 - 7,272,783 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0161,827,105 - 1,892,885 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1163,027,645 - 3,064,557 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl163,027,656 - 3,064,557 (+)Ensemblpanpan1.1panPan2
FLYWCH1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1638,223,341 - 38,246,991 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl638,224,825 - 38,244,866 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha639,463,838 - 39,487,336 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0638,533,925 - 38,571,052 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl638,533,934 - 38,557,430 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1638,219,679 - 38,243,168 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0638,192,197 - 38,229,284 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0638,667,982 - 38,691,473 (-)NCBIUU_Cfam_GSD_1.0
Flywch1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344105,472,907 - 105,496,946 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366941,215,774 - 1,236,606 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366941,212,517 - 1,236,576 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FLYWCH1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl339,225,365 - 39,242,675 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1339,223,885 - 39,244,743 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2340,660,183 - 40,680,188 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FLYWCH1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.152,654,583 - 2,689,184 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl52,670,081 - 2,690,582 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606828,145,121 - 28,220,247 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Flywch1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624824680,554 - 695,025 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624824659,892 - 695,997 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Flywch1
93 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:129
Count of miRNA genes:75
Interacting mature miRNAs:79
Transcripts:ENSRNOT00000005879, ENSRNOT00000067269
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10180676123Rat
2303118Mamtr7Mammary tumor resistance QTL 70.003mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)109658275104670812Rat
2298544Neuinf9Neuroinflammation QTL 94.6nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)10580199062146030Rat
1576304Schws7Schwannoma susceptibility QTL 70.0115nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)10476552719816042Rat
737820Alc9Alcohol consumption QTL 92.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)10514402719233348Rat
631660Hcar1Hepatocarcinoma resistance QTL 13.40.0001liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)10615418215990232Rat
2293680Bss40Bone structure and strength QTL 405.660.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)10135225947Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1074336463851208Rat
634327Hc4Hypercalciuria QTL 42.4urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)10138328221Rat
634329Pia15Pristane induced arthritis QTL 153.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10124158324Rat
1578761Stresp21Stress response QTL 213.3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)10637574651375746Rat
2313064Bmd71Bone mineral density QTL 710.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)10538701450387014Rat
2313066Bss63Bone structure and strength QTL 631.40.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)10538701450387014Rat
2313081Bss64Bone structure and strength QTL 641.30.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)10538701450387014Rat
2313095Bss62Bone structure and strength QTL 621.50.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)10538701450387014Rat
2313104Bss61Bone structure and strength QTL 610.90.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)10538701450387014Rat
631828Alc5Alcohol consumption QTL 52.4consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)10514402717245662Rat
61427Cia16Collagen induced arthritis QTL 163.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10635789696121100Rat
9590310Scort19Serum corticosterone level QTL 196.30.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)101147401056474010Rat
9590268Scort13Serum corticosterone level QTL 133.260.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)101147401056474010Rat
7411611Foco17Food consumption QTL 1718.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)10142315980Rat
8662860Vetf10Vascular elastic tissue fragility QTL 10artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)10615418273453136Rat
9589136Insul27Insulin level QTL 2710.460.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)101147401056474010Rat
10401803Kidm50Kidney mass QTL 50kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1041834445418344Rat

Markers in Region
RH136914  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21012,774,747 - 12,774,928 (+)MAPPERmRatBN7.2
Rnor_6.01013,088,029 - 13,088,209NCBIRnor6.0
Rnor_5.01012,907,491 - 12,907,671UniSTSRnor5.0
RGSC_v3.41013,009,981 - 13,010,161UniSTSRGSC3.4
Celera1012,470,047 - 12,470,227UniSTS
Cytogenetic Map10q12UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 36 23 13 12 13 5 8 74 35 41 11 5
Low 7 34 28 7 28 3 3 3
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001398792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_001056224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006220586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006220587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006245882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006245883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017597585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039087076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063269299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063269300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063269301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063269302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063269303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063269304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063269305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC129118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000005879   ⟹   ENSRNOP00000005879
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1012,774,653 - 12,794,267 (-)Ensembl
Rnor_6.0 Ensembl1013,087,914 - 13,107,771 (-)Ensembl
RefSeq Acc Id: NM_001398792   ⟹   NP_001385721
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81013,279,232 - 13,298,925 (-)NCBI
mRatBN7.21012,774,644 - 12,794,338 (-)NCBI
RefSeq Acc Id: XM_006245882   ⟹   XP_006245944
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81013,279,236 - 13,298,954 (-)NCBI
mRatBN7.21012,774,644 - 12,794,373 (-)NCBI
Rnor_6.01013,087,925 - 13,107,833 (-)NCBI
Rnor_5.01012,907,389 - 12,927,264 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039087076   ⟹   XP_038943004
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81013,279,236 - 13,298,955 (-)NCBI
mRatBN7.21012,774,644 - 12,794,373 (-)NCBI
RefSeq Acc Id: XM_063269299   ⟹   XP_063125369
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81013,279,236 - 13,298,954 (-)NCBI
RefSeq Acc Id: XM_063269300   ⟹   XP_063125370
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81013,279,236 - 13,297,286 (-)NCBI
RefSeq Acc Id: XM_063269301   ⟹   XP_063125371
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81013,279,236 - 13,298,954 (-)NCBI
RefSeq Acc Id: XM_063269302   ⟹   XP_063125372
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81013,279,236 - 13,298,954 (-)NCBI
RefSeq Acc Id: XM_063269303   ⟹   XP_063125373
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81013,279,236 - 13,298,954 (-)NCBI
RefSeq Acc Id: XM_063269304   ⟹   XP_063125374
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81013,279,236 - 13,297,286 (-)NCBI
RefSeq Acc Id: XM_063269305   ⟹   XP_063125375
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81013,279,236 - 13,298,954 (-)NCBI
RefSeq Acc Id: XP_006245944   ⟸   XM_006245882
- Peptide Label: isoform X1
- UniProtKB: F7FDF2 (UniProtKB/TrEMBL),   A1L1L4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000005879   ⟸   ENSRNOT00000005879
RefSeq Acc Id: XP_038943004   ⟸   XM_039087076
- Peptide Label: isoform X1
- UniProtKB: F7FDF2 (UniProtKB/TrEMBL),   A1L1L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001385721   ⟸   NM_001398792
- UniProtKB: F7FDF2 (UniProtKB/TrEMBL),   A1L1L4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063125372   ⟸   XM_063269302
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063125375   ⟸   XM_063269305
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063125371   ⟸   XM_063269301
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063125373   ⟸   XM_063269303
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063125369   ⟸   XM_063269299
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063125370   ⟸   XM_063269300
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063125374   ⟸   XM_063269304
- Peptide Label: isoform X1
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F7FDF2-F1-model_v2 AlphaFold F7FDF2 1-667 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13697007
Promoter ID:EPDNEW_R7521
Type:initiation region
Name:Flywch1_1
Description:FLYWCH-type zinc finger 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01013,107,788 - 13,107,848EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309385 AgrOrtholog
BioCyc Gene G2FUF-25906 BioCyc
Ensembl Genes ENSRNOG00000004333 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000005879 ENTREZGENE
  ENSRNOT00000005879.8 UniProtKB/TrEMBL
Gene3D-CATH 2.20.25.240 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7114597 IMAGE-MGC_LOAD
InterPro FLYWCH_N UniProtKB/TrEMBL
  FWCH1/FWCH2 UniProtKB/TrEMBL
  Znf_FLYWCH UniProtKB/TrEMBL
KEGG Report rno:360488 UniProtKB/TrEMBL
MGC_CLONE MGC:156766 IMAGE-MGC_LOAD
NCBI Gene 360488 ENTREZGENE
PANTHER FLYWCH-TYPE ZINC FINGER-CONTAINING PROTEIN 1 UniProtKB/TrEMBL
  PTHR31665 UniProtKB/TrEMBL
Pfam FLYWCH UniProtKB/TrEMBL
  FLYWCH_N UniProtKB/TrEMBL
  FLYWCH_u UniProtKB/TrEMBL
PhenoGen Flywch1 PhenoGen
RatGTEx ENSRNOG00000004333 RatGTEx
UniProt A1L1L4 ENTREZGENE, UniProtKB/TrEMBL
  F7FDF2 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-02-26 Flywch1  FLYWCH-type zinc finger 1  RGD1309385_predicted  similar to RIKEN cDNA E030034P13 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-20 RGD1309385_predicted  similar to RIKEN cDNA E030034P13 (predicted)  LOC360488_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC360488_predicted  similar to RIKEN cDNA E030034P13 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL