Parp1 (poly (ADP-ribose) polymerase 1) - Rat Genome Database

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Gene: Parp1 (poly (ADP-ribose) polymerase 1) Rattus norvegicus
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Symbol: Parp1
Name: poly (ADP-ribose) polymerase 1
RGD ID: 2053
Description: Enables several functions, including NAD+ ADP-ribosyltransferase activity; R-SMAD binding activity; and enzyme binding activity. Involved in several processes, including cellular response to amyloid-beta; regulation of gene expression; and regulation of signal transduction. Located in nucleus. Used to study congestive heart failure; middle cerebral artery infarction; and transient cerebral ischemia. Biomarker of several diseases, including borna disease; cerebrovascular disease (multiple); kidney failure; perinatal necrotizing enterocolitis; and ureteral obstruction. Human ortholog(s) of this gene implicated in several diseases, including arthritis; bacterial meningitis; neurodegenerative disease (multiple); stomach carcinoma; and type 2 diabetes mellitus. Orthologous to human PARP1 (poly(ADP-ribose) polymerase 1); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; base excision repair pathway; INTERACTS WITH (+)-pilocarpine; (+)-sesamin; (-)-anisomycin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: ADP-ribosyltransferase (NAD+; ADP-ribosyltransferase (NAD+); ADP-ribosyltransferase (NAD+, poly (ADP-ribose) polymerase); ADP-ribosyltransferase 1; ADP-ribosyltransferase diphtheria toxin-like 1; Adprt; ADPRT 1; ARTD1; DNA ADP-ribosyltransferase PARP1; MGC93658; NAD(+) ADP-ribosyltransferase 1; Parp-1; poly (ADP-ribose) polymerase family, member 1; poly (ADP-ribose) polymerase); poly [ADP-ribose] polymerase 1; Poly(ADP-ribose) polymerase; poly(ADP-ribose) polymerase PARP-1; poly(ADP-ribose) polymerase, PARP-1; poly[ADP-ribose] synthase 1; poly[ADP-ribose] synthetase 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81394,839,484 - 94,871,295 (+)NCBIGRCr8
mRatBN7.21392,307,593 - 92,339,406 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1392,307,586 - 92,339,404 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1394,812,753 - 94,844,565 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01396,212,939 - 96,244,750 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01393,387,644 - 93,419,455 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01398,857,255 - 98,889,444 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1398,857,177 - 98,889,716 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013103,859,760 - 103,891,949 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41396,309,670 - 96,341,486 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11396,498,605 - 96,530,421 (+)NCBI
Celera1391,853,812 - 91,885,580 (+)NCBICelera
Cytogenetic Map13q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
abdominal aortic aneurysm  (ISO)
Acute Experimental Pancreatitis  (ISO)
acute kidney failure  (ISO)
Acute Lung Injury  (ISO)
adult respiratory distress syndrome  (ISO)
alopecia  (ISO)
Alveolar Bone Loss  (ISO)
Alzheimer's disease  (ISO)
anemia  (ISO)
arthritis  (ISO)
asthma  (ISO)
atherosclerosis  (ISO)
autoimmune disease  (ISO)
bacterial meningitis  (ISO)
borna disease  (IEP)
Brain Injuries  (ISO)
brain ischemia  (ISO)
Breast Neoplasms  (ISO)
cardiomyopathy  (ISO)
Carotid Artery Injuries  (IEP)
Colorectal Neoplasms  (ISO)
congestive heart failure  (IMP)
dermatitis  (ISO)
Diabetic Nephropathies  (ISO)
diabetic neuropathy  (ISO)
Experimental Arthritis  (ISO)
Experimental Diabetes Mellitus  (ISO)
Experimental Mammary Neoplasms  (IDA)
Fibrosis  (ISO)
gastrointestinal stromal tumor  (ISO)
genetic disease  (ISO)
glomerulonephritis  (ISO)
hepatitis  (ISO)
hepatocellular carcinoma  (ISO)
hereditary renal cell carcinoma  (ISO)
Huntington's disease  (ISO)
hyperglycemia  (ISO)
idiopathic pulmonary fibrosis  (ISO)
Inflammation  (ISO)
intellectual disability  (ISO)
kidney disease  (ISO)
kidney failure  (IEP)
kyphosis  (ISO)
leiomyoma  (IEP)
liver cirrhosis  (ISO)
Lung Injury  (ISO)
malignant mesothelioma  (ISO)
melanoma  (ISO)
middle cerebral artery infarction  (IDA,IEP,ISO)
multiple myeloma  (ISO)
myocardial infarction  (ISO)
Myocardial Reperfusion Injury  (ISO)
Neointima  (IMP)
Neoplastic Cell Transformation  (ISO)
nephritis  (ISO)
neuronal ceroid lipofuscinosis 1  (ISO)
obesity  (ISO)
pancreatitis  (ISO)
Paralysis  (ISO)
parathyroid carcinoma  (ISO)
Parkinson's disease  (ISO)
Parkinsonism  (ISO)
perinatal necrotizing enterocolitis  (IEP,ISO)
periodontitis  (ISO)
periventricular leukomalacia  (ISO)
Plaque, Atherosclerotic  (ISO)
pneumonia  (ISO)
Prostatic Neoplasms  (ISO)
pulmonary edema  (ISO)
pulmonary fibrosis  (ISO)
Reperfusion Injury  (IEP,ISO)
Spinal Cord Injuries  (IEP,ISO)
Spinal Cord Ischemia  (ISO)
Stevens-Johnson syndrome  (ISO)
stomach cancer  (ISO)
stomach carcinoma  (ISO)
systemic lupus erythematosus  (ISO)
toxic shock syndrome  (ISO)
transient cerebral ischemia  (IDA,IEP)
traumatic brain injury  (ISO)
type 2 diabetes mellitus  (ISO)
ureteral obstruction  (IEP)
Vitamin A Deficiency  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
(+)-dexrazoxane  (ISO)
(+)-pilocarpine  (EXP)
(+)-sesamin  (EXP)
(+)-Tetrandrine  (ISO)
(-)-anisomycin  (EXP)
(-)-bornyl-caffeate  (EXP)
(-)-epigallocatechin 3-gallate  (ISO)
(-)-gambogic acid  (ISO)
(-)-noscapine  (ISO)
(-)-selegiline  (ISO)
(20R)-protopanaxadiol  (ISO)
(20S)-ginsenoside Rg3  (ISO)
(3,4-dihydroxyphenyl)acetic acid  (ISO)
(aminomethyl)phosphonic acid  (ISO)
(aminooxy)acetic acid  (ISO)
(R)-adrenaline  (ISO)
(R,R,R)-alpha-tocopherol  (EXP,ISO)
(S)-colchicine  (ISO)
(S)-naringenin  (ISO)
(S)-nicotine  (EXP,ISO)
(S)-ropivacaine  (ISO)
1'-acetoxychavicol acetate  (ISO)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (EXP)
1,2-dimethylhydrazine  (EXP,ISO)
1,3-dichloropropan-2-ol  (ISO)
1,3-dinitrobenzene  (ISO)
1,4-dithiothreitol  (ISO)
1,4-naphthoquinone  (ISO)
1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-2-benzofuran-5-carbonitrile  (ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (ISO)
1-monopalmitoylglycerol  (ISO)
15-deoxy-Delta(12,14)-prostaglandin J2  (EXP,ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (EXP)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-D  (EXP)
2,6-di-tert-butyl-4-methylphenol  (ISO)
2-(3,4-dimethoxyphenyl)-5-\{[2-(3,4-dimethoxyphenyl)ethyl](methyl)amino\}-2-(propan-2-yl)pentanenitrile  (ISO)
2-amino-14,16-dimethyloctadecan-3-ol  (ISO)
2-amino-2-deoxy-D-galactopyranose  (ISO)
2-amino-2-deoxy-D-glucopyranose  (ISO)
2-arachidonoylglycerol  (ISO)
2-deoxy-D-glucose  (ISO)
2-hydroxyethyl methacrylate  (ISO)
2-methoxy-17beta-estradiol  (ISO)
2-methyl-6-(phenylethynyl)pyridine  (ISO)
2-tert-butylhydroquinone  (ISO)
2-trans,6-trans,10-trans-geranylgeranyl diphosphate  (ISO)
20-hydroxyecdysone  (ISO)
3'-O-(4-Benzoyl)benzoyl ATP  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (EXP,ISO)
3,3',4,4'-tetrachlorobiphenyl  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,3'-diindolylmethane  (ISO)
3,4-methylenedioxymethamphetamine  (EXP,ISO)
3-(1H-indol-3-yl)propanoic acid  (ISO)
3-\{1-[3-(dimethylamino)propyl]-1H-indol-3-yl\}-4-(1H-indol-3-yl)-1H-pyrrole-2,5-dione  (ISO)
3-aminobenzamide  (EXP,ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-methyl-3H-imidazo[4,5-f]quinolin-2-amine  (ISO)
3-methyladenine  (EXP,ISO)
3-methylcholanthrene  (EXP)
3-Nitrofluoranthene  (ISO)
3-phenylprop-2-enal  (ISO)
4'-epidoxorubicin  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-diisothiocyano-trans-stilbene-2,2'-disulfonic acid  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-(4-chloro-2-methylphenoxy)-N-hydroxybutanamide  (ISO)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
4-amino-1,8-naphthalimide  (ISO)
4-amino-2,6-dinitrotoluene  (EXP)
4-hydroxynon-2-enal  (ISO)
4-hydroxyphenyl retinamide  (ISO)
4-Nerolidylcatechol  (ISO)
4-phenylbutyric acid  (EXP,ISO)
5'-phosphopyridoxal-6-azobenzene-2,4-disulfonic acid  (ISO)
5,7-dihydroxy-4'-methoxyflavone  (ISO)
5-aminolevulinic acid  (ISO)
5-aza-2'-deoxycytidine  (ISO)
5-azacytidine  (ISO)
5-fluorouracil  (ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (ISO)
6-(cyclohexylmethoxy)-5-nitrosopyrimidine-2,4-diamine  (ISO)
6-aminonicotinamide  (ISO)
6-bromoindirubin-3'-oxime  (ISO)
6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxamide  (ISO)
7,12-dimethyltetraphene  (EXP,ISO)
7,9-dihydro-1H-purine-2,6,8(3H)-trione  (ISO)
7-ketocholesterol  (EXP)
8-(4-chlorophenylthio)-cAMP  (ISO)
9-cis-retinoic acid  (ISO)
[6]-Shogaol  (ISO)
ABT-737  (ISO)
acadesine  (ISO)
acenaphthylene  (ISO)
acetaldehyde  (ISO)
acetochlor  (ISO)
acetylleucyl-leucyl-norleucinal  (ISO)
acetylsalicylic acid  (ISO)
acifluorfen  (ISO)
aclacinomycin A  (ISO)
acrolein  (EXP,ISO)
acrylamide  (ISO)
acrylonitrile  (ISO)
actinomycin D  (ISO)
Aeroplysinin 1  (ISO)
aflatoxin B1  (ISO)
Aflatoxin G1  (ISO)
aflatoxin M1  (ISO)
AH23848  (ISO)
alantolactone  (ISO)
alborixin  (ISO)
aldehydo-D-glucosamine  (ISO)
aldehydo-D-glucose  (EXP,ISO)
alginic acid  (ISO)
Alisol B  (ISO)
all-trans-acitretin  (ISO)
all-trans-retinal  (ISO)
all-trans-retinoic acid  (ISO)
allethrin  (EXP)
alloxan  (EXP)
alpha,alpha-trehalose  (ISO)
alpha-mangostin  (ISO)
alpha-naphthoflavone  (ISO)
alpha-pinene  (ISO)
alpinumisoflavone  (ISO)
alprazolam  (ISO)
alvocidib  (ISO)
AM-251  (ISO)
amiloride  (ISO)
aminoguanidine  (ISO)
amiodarone  (ISO)
ammonia  (EXP)
ammonium acetate  (EXP)
ammonium chloride  (EXP,ISO)
amosite asbestos  (ISO)
amphetamine  (EXP)
anandamide  (ISO)
andrographolide  (ISO)
anethole  (ISO)
anthocyanin  (EXP)
anthra[1,9-cd]pyrazol-6(2H)-one  (EXP,ISO)
Antimony trioxide  (ISO)
antimycin A  (ISO)
Antrocin  (ISO)
apigenin  (ISO)
apocynin  (EXP,ISO)
arachidonic acid  (ISO)
arachidonyl-2'-chloroethylamide  (ISO)
aristolochic acid A  (EXP,ISO)
arjunolic acid  (ISO)
Aroclor 1254  (ISO)
arsane  (EXP,ISO)
arsenic atom  (EXP,ISO)
arsenite(3-)  (ISO)
arsenous acid  (EXP,ISO)
artesunate  (ISO)
asbestos  (ISO)
Aspidin  (ISO)
astilbin  (ISO)
atorvastatin calcium  (ISO)
ATP  (ISO)
Atranorin  (ISO)
atrazine  (ISO)
aucubin  (ISO)
auranofin  (ISO)
aurantiamide acetate  (ISO)
Auriculasin  (ISO)
bafilomycin A1  (EXP,ISO)
BAPTA  (ISO)
Bardoxolone methyl  (ISO)
belinostat  (ISO)
bellidifolin  (ISO)
benomyl  (ISO)
benzalkonium chloride  (ISO)
benzamide  (EXP,ISO)
benzatropine  (ISO)
benzene  (ISO)
benzo[a]pyrene  (ISO)
Benzo[a]pyrene-7,8-diol  (ISO)
benzo[b]fluoranthene  (ISO)
Benzo[ghi]perylene  (ISO)
Benzo[k]fluoranthene  (ISO)
benzoates  (ISO)
Benzoyl peroxide  (ISO)
berberine  (ISO)
beta-carboline  (ISO)
beta-cyclodextrin  (ISO)
beta-D-glucosamine  (ISO)
beta-Elemonic acid  (ISO)
beta-ionone  (ISO)
betulin  (ISO)
betulinic acid  (ISO)
bicalutamide  (ISO)
bilirubin IXalpha  (ISO)
biochanin A  (ISO)
bis(2-chloroethyl) sulfide  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
bleomycin A2  (EXP,ISO)
bortezomib  (ISO)
bosutinib  (ISO)
brassinin  (ISO)
brazilin  (ISO)
brefeldin A  (ISO)
Brusatol  (ISO)
bufalin  (ISO)
busulfan  (ISO)
butein  (ISO)
butylated hydroxyanisole  (ISO)
butyric acid  (ISO)
C.I. Natural Red 20  (ISO)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP,ISO)
cadmium sulfate  (ISO)
caffeine  (EXP,ISO)
calciol  (ISO)
calcium atom  (ISO)
calcium(0)  (ISO)
Calpeptin  (EXP,ISO)
camptothecin  (EXP,ISO)
cannabidiol  (ISO)
cantharidic acid  (ISO)
cantharidin  (ISO)
capillarisin  (ISO)
capsaicin  (ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
carboplatin  (ISO)
Cardamonin  (ISO)
carmustine  (ISO)
carnosic acid  (EXP,ISO)
carnosine  (ISO)
Carnosol  (ISO)
carteolol  (ISO)
casticin  (ISO)
CDP-choline  (ISO)
celastrol  (ISO)
celecoxib  (ISO)
cepharanthine  (ISO)
cetylpyridinium  (ISO)
chalcone  (ISO)
chalcones  (ISO)
chenodeoxycholic acid  (ISO)
chloramphenicol  (ISO)
chlordecone  (ISO)
chloroacetic acid  (ISO)
chloropicrin  (ISO)
chloroquine  (EXP,ISO)
chlorpyrifos  (EXP,ISO)
cholesterol  (ISO)
chromium atom  (ISO)
chromium(6+)  (ISO)
chromone  (ISO)
chrysin  (EXP,ISO)
ciglitazone  (ISO)
cinchocaine  (EXP)
Cinobufagin  (ISO)
ciprofloxacin  (ISO)
cisplatin  (EXP,ISO)
citalopram  (ISO)
cladribine  (ISO)
clobetasol  (ISO)
clofarabine  (ISO)
clofibric acid  (EXP)
clomipramine  (ISO)
cobalt atom  (ISO)
cobalt dichloride  (ISO)
cobimetinib  (ISO)
cocaine  (EXP,ISO)
colforsin daropate hydrochloride  (ISO)
colistin  (EXP)
concanamycin A  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
cordycepin  (EXP,ISO)
coumarin  (ISO)
coumarins  (ISO)
coumestrol  (ISO)
crizotinib  (ISO)
crocidolite asbestos  (ISO)
crocin-1  (ISO)
Cryptotanshinone  (ISO)
crystal violet  (ISO)
cucurbitacin E  (EXP,ISO)
cucurbitacin I  (ISO)
Cuprizon  (ISO)
curcumin  (EXP,ISO)
CX-5461  (ISO)
cycloheximide  (EXP,ISO)
cyclophosphamide  (EXP,ISO)
cyclosporin A  (EXP,ISO)
cylindrospermopsin  (ISO)
cypermethrin  (ISO)
cytarabine  (ISO)
D-cycloserine  (ISO)
D-glucose  (EXP,ISO)
D-penicillamine  (ISO)
dactolisib  (ISO)
daidzein  (ISO)
daunorubicin  (ISO)
DDE  (ISO)
decabromodiphenyl ether  (ISO)
Decursin  (ISO)
deguelin  (ISO)
delphinidin  (ISO)
demethoxycurcumin  (ISO)
demethoxyfumitremorgin C  (ISO)
deoxycholic acid  (ISO)
deoxynivalenol  (ISO)
desferrioxamine B  (ISO)
desloratadine  (ISO)
Destruxin B  (ISO)
dexamethasone  (ISO)
dexamethasone phosphate  (ISO)
dextran sulfate  (ISO)
Diacetoxyscirpenol  (ISO)
diallyl disulfide  (ISO)
diallyl trisulfide  (ISO)
diarsenic trioxide  (EXP,ISO)
dibenziodolium  (EXP,ISO)
dibutyl phthalate  (ISO)
dichloroacetic acid  (ISO)
dichlorvos  (EXP)
diclofenac  (ISO)
Dictamnine  (ISO)
Didecyldimethylammonium  (ISO)
dieldrin  (EXP)
diepoxybutane  (ISO)
diethyl fumarate  (ISO)
diethyl maleate  (ISO)
diethyl phthalate  (ISO)
dihydrogen  (ISO)
dihydroxyacetone  (ISO)
dimethyl maleate  (ISO)
dimethyl sulfoxide  (ISO)
dimethylarsinous acid  (ISO)
dioscin  (EXP,ISO)
diosmetin  (EXP)
diosmin  (ISO)
dioxygen  (EXP,ISO)
diprotium  (ISO)
diquat  (ISO)
disodium selenite  (EXP,ISO)
disulfiram  (ISO)
divinyl sulfone  (ISO)
dizocilpine maleate  (EXP)
dopamine  (ISO)
dorsomorphin  (ISO)
doxorubicin  (EXP,ISO)
Echimidine  (ISO)
edaravone  (ISO)
elemental selenium  (ISO)
ellagic acid  (EXP)
ellipticine  (ISO)
embelin  (ISO)
emetine  (ISO)
emodin  (ISO)
Enterolactone  (ISO)
enzalutamide  (ISO)
enzyme inhibitor  (ISO)
epalrestat  (ISO)
epothilone A  (ISO)
epoxomicin  (ISO)
erdosteine  (EXP,ISO)
erlotinib hydrochloride  (ISO)
esculetin  (ISO)
etacrynic acid  (ISO)
ethanol  (EXP,ISO)
ethylene glycol bis(2-aminoethyl)tetraacetic acid  (EXP,ISO)
etoposide  (EXP,ISO)
eugenol  (ISO)
EUK-134  (ISO)
everolimus  (ISO)
Evodiamine  (ISO)
excitatory amino acid agonist  (EXP)
fangchinoline  (ISO)
fenvalerate  (EXP)
ferric ammonium citrate  (ISO)
ferric oxide  (ISO)
ferrosoferric oxide  (ISO)
fingolimod hydrochloride  (ISO)
fisetin  (ISO)
flavanone  (ISO)
flavanones  (ISO)
flavokawain B  (ISO)
flavone  (ISO)
flavonoids  (EXP,ISO)
floxuridine  (ISO)
fludioxonil  (ISO)
fluoranthene  (ISO)
flutamide  (EXP)
folic acid  (EXP,ISO)
formaldehyde  (EXP,ISO)
FR900359  (ISO)
frenolicin B  (ISO)
fructose  (ISO)
fulvestrant  (ISO)
fumonisin B1  (EXP,ISO)
furazolidone  (ISO)
galangin  (ISO)
gallic acid  (ISO)
gamma-linolenic acid  (ISO)
Garcinol  (ISO)
gardenin B  (ISO)
gefitinib  (ISO)
geldanamycin  (ISO)
gemcitabine  (ISO)
genistein  (EXP,ISO)
gentamycin  (EXP)
Gentiopicrin  (ISO)
Geraniin  (ISO)
gingerol  (ISO)
ginsenoside Re  (ISO)
glabridin  (ISO)
glucose  (EXP,ISO)
glutathione  (ISO)
Glutathione ethyl ester  (ISO)
glycerol 2-phosphate  (ISO)
glycochenodeoxycholic acid  (ISO)
glyphosate  (ISO)
Goe 6976  (ISO)
gold atom  (ISO)
gold(0)  (ISO)
gossypetin  (ISO)
gossypin  (ISO)
gossypol  (ISO)
GSK2656157  (ISO)
GSK690693  (ISO)
GW 3965  (EXP)
GW 4064  (ISO)
GW 501516  (ISO)
harman  (ISO)
harmine  (ISO)
Heliotrine  (ISO)
hellebrigenin  (ISO)
heparin  (EXP)
herbimycin  (ISO)
hesperidin  (EXP)
hexadecanoic acid  (EXP,ISO)
homoeriodictyol  (ISO)
homovanillic acid  (ISO)
Honokiol  (ISO)
hydralazine  (ISO)
hydrogen peroxide  (EXP,ISO)
hydroquinone  (ISO)
hydroxamic acid  (ISO)
hydroxychloroquine  (ISO)
icariside II  (ISO)
idarubicin  (ISO)
idelalisib  (ISO)
Ilimaquinone  (ISO)
imipramine  (ISO)
Indeno[1,2,3-cd]pyrene  (ISO)
indole-3-butyric acid  (ISO)
indole-3-methanol  (ISO)
indometacin  (ISO)
iodoacetic acid  (ISO)
irinotecan  (ISO)
iron atom  (ISO)
iron(0)  (ISO)
isoalantolactone  (ISO)
isobavachalcone  (ISO)
Isoliensinine  (ISO)
isoliquiritigenin  (ISO)
isoprenaline  (EXP,ISO)
isoquinoline-1,5-diol  (EXP,ISO)
isorhamnetin  (ISO)
ivermectin  (ISO)
jaceosidin  (ISO)
JBIR-99  (ISO)
juglone  (ISO)
kaempferol  (EXP,ISO)
kahweol  (ISO)
kainic acid  (EXP)
ketoconazole  (ISO)
L-1,4-dithiothreitol  (ISO)
L-ascorbic acid  (EXP,ISO)
L-ascorbic acid 2-phosphate  (ISO)
L-gamma-glutamyl-L-cysteine  (EXP)
lactulose  (EXP)
lapatinib  (ISO)
lead diacetate  (EXP,ISO)
lead(0)  (ISO)
LGK974  (ISO)
Licochalcone A  (ISO)
Licochalcone B  (ISO)
licoricidin  (ISO)
lignan  (ISO)
linsidomine  (ISO)
lipopolysaccharide  (EXP,ISO)
lithium atom  (ISO)
lithium chloride  (EXP,ISO)
lithium hydride  (ISO)
lithocholic acid  (ISO)
LM-1685  (ISO)
Longikaurin A  (ISO)
losartan  (EXP,ISO)
lovastatin  (ISO)
Lupiwighteone  (ISO)
luteolin  (EXP,ISO)
luteolin 7-O-beta-D-glucoside  (ISO)
LY294002  (EXP,ISO)
lycopene  (EXP)
lysophosphatidylethanolamine  (ISO)
Maduramicin  (EXP)
malathion  (ISO)
malvidin  (ISO)
manganese atom  (EXP,ISO)
manganese(0)  (EXP,ISO)
manganese(II) chloride  (EXP,ISO)
manumycin A  (ISO)
Melarsoprol  (ISO)
melatonin  (EXP,ISO)
melittin  (ISO)
menadione  (ISO)
menaquinone  (ISO)
mercury atom  (ISO)
mercury dichloride  (ISO)
mercury(0)  (ISO)
mesalamine  (ISO)
metformin  (EXP,ISO)
methamphetamine  (EXP,ISO)
methotrexate  (EXP,ISO)
methoxsalen  (ISO)
methoxyacetic acid  (ISO)
methyl beta-cyclodextrin  (ISO)
methyl caffeate  (ISO)
methyl methanesulfonate  (ISO)
methylglyoxal  (ISO)
methylisothiazolinone  (ISO)
methylmercury chloride  (ISO)
methylseleninic acid  (ISO)
metipranolol  (EXP)
metoclopramide  (ISO)
mevalonic acid  (ISO)
Mezerein  (ISO)
microcystin-LR  (EXP,ISO)
mifepristone  (ISO)
mitomycin C  (ISO)
mitoxantrone  (ISO)
MK-2206  (ISO)
monensin A  (ISO)
monocrotophos  (ISO)
morin  (ISO)
morpholines  (ISO)
morusin  (ISO)
myo-inositol hexakisphosphate  (ISO)
myricetin  (ISO)
myriocin  (ISO)
myristicin  (ISO)
N(gamma)-nitro-L-arginine methyl ester  (ISO)
N(omega)-methyl-L-arginine  (ISO)
N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine  (ISO)
N,N-dimethylformamide  (EXP)
N,N-dimethylsphingosine  (ISO)
N-acetyl-L-cysteine  (EXP,ISO)
N-acetylsphingosine  (ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (ISO)
N-methyl-4-phenylpyridinium  (EXP,ISO)
N-methyl-D-aspartic acid  (EXP)
N-methyl-N'-nitro-N-nitrosoguanidine  (ISO)
N-methyl-N-nitrosourea  (EXP,ISO)
N-methylnicotinate  (ISO)
N-Nitrosodi-n-butylamine  (ISO)
N-nitrosodiethylamine  (EXP)
N-nitrosopiperidine  (ISO)
N-tosyl-L-phenylalanyl chloromethyl ketone  (ISO)
N1'-[2-[[5-[(dimethylamino)methyl]-2-furanyl]methylthio]ethyl]-N1-methyl-2-nitroethene-1,1-diamine  (ISO)
NAD zwitterion  (EXP,ISO)
NAD(+)  (EXP,ISO)
NADP zwitterion  (ISO)
NADP(+)  (ISO)
navitoclax  (ISO)
neoastilbin  (ISO)
nickel atom  (ISO)
nickel dichloride  (EXP,ISO)
nickel sulfate  (EXP,ISO)
niclosamide  (ISO)
nicotinamide  (EXP,ISO)
nicotine  (EXP,ISO)
nicotinic acid  (EXP,ISO)
Niflumic acid  (ISO)
nilotinib  (ISO)
nimesulide  (EXP,ISO)
niraparib  (ISO)
nirogacestat  (ISO)
nitric oxide  (ISO)
nitroglycerin  (ISO)
nitroprusside  (ISO)
Nivalenol  (ISO)
NMN zwitterion  (ISO)
nobiletin  (ISO)
nocodazole  (ISO)
Nonidet P-40  (ISO)
Nonylphenol  (ISO)
NORCANTHARIDIN  (ISO)
notoginsenoside R1  (ISO)
NS-398  (ISO)
Nutlin-3  (ISO)
O-methyleugenol  (ISO)
ochratoxin A  (ISO)
okadaic acid  (ISO)
olaparib  (ISO)
oleanolic acid  (ISO)
oleic acid  (ISO)
oligopeptide  (ISO)
omeprazole  (ISO)
omipalisib  (ISO)
organoselenium compound  (ISO)
oridonin  (ISO)
orlistat  (ISO)
oroxylin A  (ISO)
osimertinib  (ISO)
osthole  (ISO)
ouabain  (ISO)
oxaliplatin  (EXP,ISO)
oxidopamine  (EXP,ISO)
ozone  (ISO)
paclitaxel  (ISO)
Paeonol  (ISO)
palbociclib  (ISO)
pamidronate  (ISO)
Panduratin A  (ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
paraoxon  (ISO)
paraquat  (EXP,ISO)
Parthenin  (ISO)
PCB138  (ISO)
PD 0325901  (ISO)
PD173074  (ISO)
Pendulone  (ISO)
pentachlorophenol  (ISO)
pentetic acid  (ISO)
Pentoxifylline  (ISO)
pepstatin A  (ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (ISO)
perifosine  (ISO)
peroxynitrous acid  (ISO)
pevonedistat  (ISO)
phenanthrene  (ISO)
phenanthridone  (EXP,ISO)
phenethyl isothiocyanate  (ISO)
phenobarbital  (EXP,ISO)
phenylarsine oxide  (ISO)
phenylephrine  (EXP)
phloroglucinol  (ISO)
phorbol 13-acetate 12-myristate  (ISO)
phosphoramide mustard  (EXP)
phytosphingosine  (ISO)
pifithrin-?  (EXP,ISO)
piperine  (ISO)
pirinixic acid  (EXP,ISO)
pitavastatin  (ISO)
pitavastatin(1-)  (ISO)
Plantamajoside  (ISO)
platinum  (ISO)
platinum(0)  (ISO)
platycodin D  (ISO)
plumbagin  (ISO)
podophyllotoxin  (ISO)
ponatinib  (ISO)
potassium chromate  (ISO)
potassium dichromate  (EXP,ISO)
potassium iodide  (EXP)
probenecid  (ISO)
prodigiosin  (ISO)
propofol  (ISO)
prostaglandin D2  (EXP,ISO)
prostaglandin E2  (ISO)
prostaglandin J2  (EXP,ISO)
protein kinase inhibitor  (ISO)
Pseudolaric acid B  (ISO)
pterostilbene  (ISO)
puerarin  (EXP,ISO)
pyrene  (ISO)
pyrethrins  (ISO)
pyridaben  (ISO)
pyrimidifen  (ISO)
pyrroloquinoline quinone  (ISO)
quercetin  (EXP,ISO)
quercetin 3-O-beta-D-galactopyranoside  (ISO)
quercitrin  (EXP)
quinacrine  (ISO)
quinolines  (ISO)
quizartinib  (ISO)
rac-1-monopalmitoylglycerol  (ISO)
raloxifene  (ISO)
ranitidine  (ISO)
Reactive blue 2  (ISO)
reactive oxygen species  (ISO)
regorafenib  (ISO)
remdesivir  (ISO)
resveratrol  (EXP,ISO)
riboflavin  (ISO)
rifampicin  (ISO)
rimonabant  (ISO)
ritonavir  (ISO)
rocaglamide  (ISO)
romidepsin  (ISO)
rotenone  (EXP,ISO)
rottlerin  (EXP,ISO)
rubimaillin  (ISO)
rucaparib  (ISO)
ruthenium atom  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
S-adenosyl-L-methioninate  (ISO)
S-adenosyl-L-methionine  (ISO)
S-butyl-DL-homocysteine (S,R)-sulfoximine  (ISO)
S-nitroso-N-acetyl-D-penicillamine  (ISO)
Salinomycin  (ISO)
salubrinal  (ISO)
Salvianolic acid A  (EXP)
Sanggenon C  (ISO)
sappanchalcone  (ISO)
Satratoxin H  (EXP)
SB 203580  (ISO)
SB 415286  (ISO)
scoparone  (ISO)
Se-methyl-L-selenocysteine  (ISO)
Se-methylselenocysteine  (ISO)
selenium atom  (ISO)
selumetinib  (ISO)
senecionine  (ISO)
sepantronium  (ISO)
serotonin  (ISO)
sesquiterpene  (ISO)
Shikonin  (ISO)
silibinin  (ISO)
silicon dioxide  (ISO)
simvastatin  (EXP,ISO)
sirolimus  (EXP,ISO)
skatole  (ISO)
SM-164  (ISO)
sodium arsenite  (EXP,ISO)
sodium dichromate  (EXP,ISO)
sodium fluoride  (EXP,ISO)
Sodium salicylate  (ISO)
solasodine  (ISO)
Soman  (EXP)
sorafenib  (ISO)
staurosporine  (EXP,ISO)
streptozocin  (EXP,ISO)
styrene oxide  (ISO)
succimer  (EXP)
sulfonyldimethane  (ISO)
sulforaphane  (ISO)
sulindac  (ISO)
sulindac sulfide  (ISO)
sunitinib  (ISO)
surfactin  (ISO)
surfactin C  (ISO)
T-2 toxin  (ISO)
tamoxifen  (ISO)
tanespimycin  (EXP,ISO)
tangeretin  (ISO)
Tanshinone I  (ISO)
taraxasterol  (ISO)
taurine  (EXP)
tauroursodeoxycholic acid  (ISO)
Tautomycin  (ISO)
temozolomide  (ISO)
teprenone  (ISO)
tert-butyl hydroperoxide  (EXP,ISO)
testosterone  (EXP)
tetrachloromethane  (EXP,ISO)
tetramethylpyrazine  (ISO)
tetraphene  (ISO)
thalidomide  (ISO)
thapsigargin  (EXP,ISO)
Theaflavin 3,3'-digallate  (ISO)
theophylline  (ISO)
Thiotepa  (EXP)
thymoquinone  (ISO)
Tiron  (ISO)
titanium dioxide  (ISO)
Tomentosin  (ISO)
toosendanin  (ISO)
topotecan  (EXP,ISO)
trametinib  (ISO)
tranexamic acid  (ISO)
trans-anethole  (ISO)
trans-chalcone  (ISO)
triazoles  (ISO)
tributylstannane  (EXP,ISO)
tricetin  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
triciribine  (ISO)
trifluoperazine  (EXP,ISO)
trifluridine  (ISO)
trimellitic anhydride  (ISO)
triphenyl phosphate  (EXP)
Triptolide  (ISO)
triptonide  (ISO)
troglitazone  (EXP,ISO)
trovafloxacin  (ISO)
tungsten  (ISO)
tunicamycin  (ISO)
ubiquinones  (ISO)
ursodeoxycholic acid  (ISO)
ursolic acid  (ISO)
usnic acid  (ISO)
valdecoxib  (EXP)
valproic acid  (EXP,ISO)
vancomycin  (EXP)
veliparib  (ISO)
vemurafenib  (ISO)
venetoclax  (ISO)
venom  (ISO)
verapamil  (ISO)
verteporfin  (ISO)
vincaleukoblastine  (ISO)
vinclozolin  (EXP)
vincristine  (ISO)
vitamin E  (ISO)
Voacamine  (ISO)
vorinostat  (ISO)
warfarin  (ISO)
wedelolactone  (EXP,ISO)
WIN 55212-2  (ISO)
withaferin A  (ISO)
wortmannin  (ISO)
xanthohumol  (ISO)
XAV939  (ISO)
Y-27632  (ISO)
ytterbium  (ISO)
zearalenone  (EXP,ISO)
zebularine  (ISO)
zerumbone  (ISO)
zinc atom  (EXP,ISO)
zinc dichloride  (ISO)
zinc oxide  (ISO)
zinc pyrithione  (ISO)
zinc sulfate  (EXP,ISO)
zinc(0)  (EXP,ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
apoptotic process  (ISO)
ATP generation from poly-ADP-D-ribose  (ISO,ISS)
base-excision repair  (ISO)
behavioral response to cocaine  (ISO)
carbohydrate biosynthetic process  (IDA)
cellular response to amyloid-beta  (IMP)
cellular response to insulin stimulus  (ISO)
cellular response to nerve growth factor stimulus  (IDA)
cellular response to oxidative stress  (ISO)
cellular response to superoxide  (ISO)
cellular response to transforming growth factor beta stimulus  (IEP)
cellular response to UV  (ISO)
cellular response to zinc ion  (IEP)
decidualization  (ISO,ISS)
DNA ADP-ribosylation  (ISO,ISS)
DNA damage response  (IDA,ISO,ISS)
DNA metabolic process  (ISO)
DNA repair  (ISO)
double-strand break repair  (IBA,ISO,ISS)
innate immune response  (IEA)
mitochondrial DNA metabolic process  (ISO)
mitochondrial DNA repair  (ISO)
mitochondrion organization  (ISO)
negative regulation of adipose tissue development  (ISO)
negative regulation of ATP biosynthetic process  (ISO)
negative regulation of cGAS/STING signaling pathway  (ISO)
negative regulation of DNA-templated transcription  (ISO)
negative regulation of innate immune response  (ISO,ISS)
negative regulation of interleukin-17 production  (ISO)
negative regulation of telomere maintenance via telomere lengthening  (ISO)
negative regulation of transcription by RNA polymerase II  (ISO,ISS)
negative regulation of transcription elongation by RNA polymerase II  (ISO)
positive regulation of canonical NF-kappaB signal transduction  (ISO)
positive regulation of cardiac muscle hypertrophy  (IMP)
positive regulation of cellular process  (IMP)
positive regulation of DNA-templated transcription, elongation  (ISO)
positive regulation of double-strand break repair via homologous recombination  (ISO,ISS)
positive regulation of intracellular estrogen receptor signaling pathway  (IMP)
positive regulation of mitochondrial depolarization  (IMP)
positive regulation of myofibroblast differentiation  (IMP)
positive regulation of necroptotic process  (ISO,ISS)
positive regulation of protein localization to nucleus  (IMP)
positive regulation of single strand break repair  (ISO)
positive regulation of SMAD protein signal transduction  (IMP)
positive regulation of transcription by RNA polymerase II  (IMP,ISO)
protein auto-ADP-ribosylation  (ISO,ISS)
protein autoprocessing  (IDA)
protein localization to chromatin  (ISO)
protein modification process  (ISO)
regulation of base-excision repair  (ISO)
regulation of circadian sleep/wake cycle, non-REM sleep  (ISO,ISS)
regulation of growth rate  (ISO)
regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway  (IMP)
regulation of protein localization  (ISO)
regulation of single strand break repair  (ISO)
replication fork reversal  (ISO,ISS)
response to aldosterone  (IEP)
response to gamma radiation  (IEP)
signal transduction involved in regulation of gene expression  (IMP)
telomere maintenance  (ISO)
transforming growth factor beta receptor signaling pathway  (IMP)
voluntary musculoskeletal movement  (ISO)

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Beta-amyloid activates PARP causing astrocytic metabolic failure and neuronal death. Abeti R, etal., Brain. 2011 Jun;134(Pt 6):1658-72. doi: 10.1093/brain/awr104.
2. Structures and Mechanisms of Enzymes Employed in the Synthesis and Degradation of PARP-Dependent Protein ADP-Ribosylation. Barkauskaite E, etal., Mol Cell. 2015 Jun 18;58(6):935-46. doi: 10.1016/j.molcel.2015.05.007.
3. PARP inhibition delays transition of hypertensive cardiopathy to heart failure in spontaneously hypertensive rats. Bartha E, etal., Cardiovasc Res. 2009 Aug 1;83(3):501-10. doi: 10.1093/cvr/cvp144. Epub 2009 May 14.
4. Isolation of cDNA encoding full-length rat (Rattus norvegicus) poly (ADP-ribose) polymerase. Beneke S, etal., Biochem Mol Biol Int 1997 Nov;43(4):755-61.
5. Genomic structure, conservation and FISH mapping of the Rattus norvegicus Adprt gene. Beneke S, etal., Cytogenet Genome Res 2002;98(4):298-301.
6. Chemopreventive effect of a novel oleanane triterpenoid in a chemically induced rodent model of breast cancer. Bishayee A, etal., Int J Cancer. 2013 Sep 1;133(5):1054-63. doi: 10.1002/ijc.28108. Epub 2013 Mar 29.
7. Gene knockout or pharmacological inhibition of poly(ADP-ribose) polymerase-1 prevents lung inflammation in a murine model of asthma. Boulares AH, etal., Am J Respir Cell Mol Biol. 2003 Mar;28(3):322-9.
8. Association analysis of PARP1 polymorphisms with Parkinson's disease. Brighina L, etal., Parkinsonism Relat Disord. 2011 Nov;17(9):701-4. Epub 2011 Jul 20.
9. PARP mediates structural alterations in diabetic cardiomyopathy. Chiu J, etal., J Mol Cell Cardiol. 2008 Sep;45(3):385-93. Epub 2008 Jul 8.
10. SNPs in DNA repair genes associated to meningitis and host immune response. da Silva TA, etal., Mutat Res. 2011 Aug 1;713(1-2):39-47. Epub 2011 May 27.
11. Role of the poly(ADP-ribose)polymerase activity in vancomycin-induced renal injury. Dalaklioglu S, etal., Toxicol Lett. 2010 Feb 1;192(2):91-6. doi: 10.1016/j.toxlet.2009.10.002. Epub 2009 Oct 13.
12. Poly(ADP-ribose) polymerase-1 protects neurons against apoptosis induced by oxidative stress. Diaz-Hernandez JI, etal., Cell Death Differ. 2007 Jun;14(6):1211-21. Epub 2007 Mar 9.
13. Intramyocardial administration of chimeric ephrinA1-Fc promotes tissue salvage following myocardial infarction in mice. Dries JL, etal., J Physiol. 2011 Apr 1;589(Pt 7):1725-40. Epub 2011 Jan 31.
14. Ischemic brain injury is mediated by the activation of poly(ADP-ribose)polymerase. Endres M, etal., J Cereb Blood Flow Metab. 1997 Nov;17(11):1143-51.
15. The orphan receptor NOR1 participates in isoprenaline-induced cardiac hypertrophy by regulating PARP-1. Feng XJ, etal., Br J Pharmacol. 2015 Jun;172(11):2852-63. doi: 10.1111/bph.13091. Epub 2015 Mar 26.
16. Partial protection against collagen antibody-induced arthritis in PARP-1 deficient mice. Garcia S, etal., Arthritis Res Ther. 2006;8(1):R14.
17. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
18. Modulation of poly(ADP-ribose) polymerase-1 (PARP-1)-mediated oxidative cell injury by ring finger protein 146 (RNF146) in cardiac myocytes. Gerö D, etal., Mol Med. 2014 Jul 31;20:313-28. doi: 10.2119/molmed.2014.00102.
19. PARP is activated in human asthma and its inhibition by olaparib blocks house dust mite-induced disease in mice. Ghonim MA, etal., Clin Sci (Lond). 2015 Dec;129(11):951-62. doi: 10.1042/CS20150122. Epub 2015 Jul 23.
20. Poly(ADP-ribose) polymerase-1: a novel therapeutic target in necrotizing enterocolitis. Giannone PJ, etal., Pediatr Res. 2011 Jul;70(1):67-71. doi: 10.1038/pr.2011.292.
21. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
22. Apoptotic splenocytes drive the autoimmune response to poly(ADP-ribose) polymerase 1 in a murine model of lupus. Grader-Beck T, etal., J Immunol. 2007 Jan 1;178(1):95-102.
23. Clinical perspectives of PARP inhibitors. Graziani G and Szabo C, Pharmacol Res. 2005 Jul;52(1):109-18.
24. Towards non-surgical therapy for uterine fibroids: catechol-O-methyl transferase inhibitor shrinks uterine fibroid lesions in the Eker rat model. Hassan MH, etal., Hum Reprod. 2011 Nov;26(11):3008-18. doi: 10.1093/humrep/der280. Epub 2011 Sep 6.
25. Regulation of myofibroblast differentiation by poly(ADP-ribose) polymerase 1. Hu B, etal., Am J Pathol. 2013 Jan;182(1):71-83. doi: 10.1016/j.ajpath.2012.09.004.
26. Poly(ADP-ribose) polymerase 1 is indispensable for transforming growth factor-beta Induced Smad3 activation in vascular smooth muscle cell. Huang D, etal., PLoS One. 2011;6(10):e27123. doi: 10.1371/journal.pone.0027123. Epub 2011 Oct 31.
27. Neuronal expression of TATA box-binding protein containing expanded polyglutamine in knock-in mice reduces chaperone protein response by impairing the function of nuclear factor-Y transcription factor. Huang S, etal., Brain. 2011 Jul;134(Pt 7):1943-58.
28. Poly(ADP-ribose) polymerase (PARP) polymorphisms associated with nephritis and arthritis in systemic lupus erythematosus. Hur JW, etal., Rheumatology (Oxford). 2006 Jun;45(6):711-7. Epub 2006 Feb 3.
29. Interaction between poly(ADP-ribose) polymerase 1 and interleukin 1A genes is associated with Alzheimer's disease risk. Infante J, etal., Dement Geriatr Cogn Disord. 2007;23(4):215-8. Epub 2007 Feb 9.
30. Poly (ADP-ribose) polymerase-1 (PARP-1) genetic variants are protective against Parkinson's disease. Infante J, etal., J Neurol Sci. 2007 May 15;256(1-2):68-70. Epub 2007 Mar 23.
31. Poly(ADP-ribose) polymerase-1 regulates the progression of autoimmune nephritis in males by inducing necrotic cell death and modulating inflammation. Jog NR, etal., J Immunol. 2009 Jun 1;182(11):7297-306.
32. Poly(ADP-ribose)polymerase-1 modulates microglial responses to amyloid beta. Kauppinen TM, etal., J Neuroinflammation. 2011 Nov 3;8(1):152.
33. Loss of poly(ADP-ribose) polymerase 1 attenuates renal fibrosis and inflammation during unilateral ureteral obstruction. Kim J and Padanilam BJ, Am J Physiol Renal Physiol. 2011 Aug;301(2):F450-9. Epub 2011 May 25.
34. PARP expression is increased in astrocytes but decreased in motor neurons in the spinal cord of sporadic ALS patients. Kim SH, etal., J Neuropathol Exp Neurol. 2003 Jan;62(1):88-103.
35. p53- and Bax-mediated apoptosis in injured rat spinal cord. Kotipatruni RR, etal., Neurochem Res. 2011 Nov;36(11):2063-74. doi: 10.1007/s11064-011-0530-2. Epub 2011 Jul 7.
36. Carbon monoxide induces hypothermia tolerance in kupffer cells and attenuates liver schemia/reperfusion injury in rats. Lee LY, etal., Liver Transpl. 2011 Aug 17. doi: 10.1002/lt.22415.
37. By improving regional cortical blood flow, attenuating mitochondrial dysfunction and sequential apoptosis galangin acts as a potential neuroprotective agent after acute ischemic stroke. Li S, etal., Molecules. 2012 Nov 9;17(11):13403-23. doi: 10.3390/molecules171113403.
38. Sex differences in the response to poly(ADP-ribose) polymerase-1 deletion and caspase inhibition after stroke. Liu F, etal., Stroke. 2011 Apr;42(4):1090-6. Epub 2011 Feb 10.
39. Evaluation of the poly(ADP-ribose) polymerase-1 gene variants in Alzheimer's disease. Liu HP, etal., J Clin Lab Anal. 2010;24(3):182-6. doi: 10.1002/jcla.20379.
40. Neuroprotective potential of erythropoietin and its derivative carbamylated erythropoietin in periventricular leukomalacia. Liu W, etal., Exp Neurol. 2011 Aug;230(2):227-39. Epub 2011 May 6.
41. Hypochlorite modified albumins promote cell death in the tubule interstitium in rats via mitochondrial damage in obstructive nephropathy and the protective effects of antioxidant peptides. Liu ZR, etal., Free Radic Res. 2018 May;52(5):616-628. doi: 10.1080/10715762.2018.1457789.
42. Role of the activation of the nuclear enzyme poly(ADP-ribose) polymerase in the pathogenesis of periodontitis. Lohinai Z, etal., J Dent Res. 2003 Dec;82(12):987-92.
43. PARP1 Stabilizes CTCF Binding and Chromatin Structure To Maintain Epstein-Barr Virus Latency Type. Lupey-Green LN, etal., J Virol. 2018 Aug 29;92(18). pii: JVI.00755-18. doi: 10.1128/JVI.00755-18. Print 2018 Sep 15.
44. Misregulation of poly(ADP-ribose) polymerase-1 activity and cell type-specific loss of poly(ADP-ribose) synthesis in the cerebellum of aged rats. Malanga M, etal., J Neurochem. 2005 May;93(4):1000-9.
45. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
46. Inhibition of poly(ADP-ribose) polymerase attenuates the severity of acute pancreatitis and associated lung injury. Mota RA, etal., Lab Invest. 2005 Oct;85(10):1250-62.
47. Reduced Expression of DNA Damage Repair Genes High Mobility Group Box1 and Poly(ADP-ribose) Polymerase1 in Inactive Carriers of Hepatitis B Virus Infection-A Possible Stage of Viral Integration. Mukherjee RM, etal., J Clin Exp Hepatol. 2013 Jun;3(2):89-95. doi: 10.1016/j.jceh.2013.04.003. Epub 2013 May 22.
48. Poly(ADP-ribose) polymerase-1 is a key mediator of cisplatin-induced kidney inflammation and injury. Mukhopadhyay P, etal., Free Radic Biol Med. 2011 Nov 1;51(9):1774-88. Epub 2011 Aug 17.
49. Nuclear-translocated Glyceraldehyde-3-phosphate Dehydrogenase Promotes Poly(ADP-ribose) Polymerase-1 Activation during Oxidative/Nitrosative Stress in Stroke. Nakajima H, etal., J Biol Chem. 2015 Jun 5;290(23):14493-503. doi: 10.1074/jbc.M114.635607. Epub 2015 Apr 16.
50. Poly (ADP-ribose) polymerase and DNA-dependent protein kinase: differential activation in vivo. Narang H, etal., J Environ Pathol Toxicol Oncol. 2004;23(1):45-51.
51. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
52. PARP inhibition or gene deficiency counteracts intraepidermal nerve fiber loss and neuropathic pain in advanced diabetic neuropathy. Obrosova IG, etal., Free Radic Biol Med. 2008 Mar 15;44(6):972-81. Epub 2007 Oct 3.
53. Role of poly(ADP-ribose) polymerase activation in endotoxin-induced cardiac collapse in rodents. Pacher P, etal., Biochem Pharmacol. 2002 Dec 15;64(12):1785-91.
54. Activation of poly(ADP-ribose) polymerase contributes to the endothelial dysfunction associated with hypertension and aging. Pacher P, etal., Int J Mol Med 2002 Jun;9(6):659-64.
55. Zinc promotes the death of hypoxic astrocytes by upregulating hypoxia-induced hypoxia-inducible factor-1alpha expression via poly(ADP-ribose) polymerase-1. Pan R, etal., CNS Neurosci Ther. 2013 Jul;19(7):511-20. doi: 10.1111/cns.12098. Epub 2013 Apr 13.
56. Poly(ADP-ribose) polymerase-deficient mice are protected from streptozotocin-induced diabetes. Pieper AA, etal., Proc Natl Acad Sci U S A 1999 Mar 16;96(6):3059-64.
57. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
58. SIRT1 promotes cell survival under stress by deacetylation-dependent deactivation of poly(ADP-ribose) polymerase 1. Rajamohan SB, etal., Mol Cell Biol. 2009 Aug;29(15):4116-29. doi: 10.1128/MCB.00121-09. Epub 2009 May 26.
59. GOA pipeline RGD automated data pipeline
60. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
61. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
62. Poly (ADP-ribose) polymerase-1 haplotypes are associated with coeliac disease. Rueda B, etal., Int J Immunogenet. 2005 Aug;32(4):245-8.
63. ROS-mediated PARP activity undermines mitochondrial function after permeability transition pore opening during myocardial ischemia-reperfusion. Schriewer JM, etal., J Am Heart Assoc. 2013 Apr 18;2(2):e000159. doi: 10.1161/JAHA.113.000159.
64. Poly(ADP-ribose) polymerase-1 (PARP-1) gene deficiency alleviates diabetic kidney disease. Shevalye H, etal., Biochim Biophys Acta. 2010 Nov;1802(11):1020-7. doi: 10.1016/j.bbadis.2010.07.004. Epub 2010 Jul 16.
65. Androgen and PARP-1 regulation of TRPM2 channels after ischemic injury. Shimizu T, etal., J Cereb Blood Flow Metab. 2013 Oct;33(10):1549-55. doi: 10.1038/jcbfm.2013.105. Epub 2013 Jun 26.
66. Effect of aging and oxidative/genotoxic stress on poly(ADP-ribose) polymerase-1 activity in rat brain. Strosznajder RP, etal., Acta Biochim Pol. 2005;52(4):909-14. Epub 2005 Nov 21.
67. Poly(ADP-ribose)polymerase activity is reduced in circulating mononuclear cells from type 2 diabetic patients. Tempera I, etal., J Cell Physiol. 2005 Dec;205(3):387-92.
68. Bone marrow expression of poly(ADP-ribose) polymerase underlies diabetic neuropathy via hematopoietic-neuronal cell fusion. Terashima T, etal., FASEB J. 2011 Oct 6.
69. Expression pattern of apoptosis-related markers in Huntington's disease. Vis JC, etal., Acta Neuropathol. 2005 Mar;109(3):321-8. Epub 2005 Jan 25.
70. PolyADP-ribosylation is involved in neurotrophic activity. Visochek L, etal., J Neurosci. 2005 Aug 10;25(32):7420-8.
71. PARP1 is required for adhesion molecule expression in atherogenesis. von Lukowicz T, etal., Cardiovasc Res. 2008 Apr 1;78(1):158-66. Epub 2007 Dec 18.
72. Hippocampal poly(ADP-Ribose) polymerase 1 and caspase 3 activation in neonatal bornavirus infection. Williams BL, etal., J Virol. 2008 Feb;82(4):1748-58. Epub 2007 Dec 5.
73. Increased intranuclear matrix metalloproteinase activity in neurons interferes with oxidative DNA repair in focal cerebral ischemia. Yang Y, etal., J Neurochem. 2010 Jan;112(1):134-49. Epub 2009 Oct 15.
74. Effects of PARP-1 deficiency on airway inflammatory cell recruitment in response to LPS or TNF: differential effects on CXCR2 ligands and Duffy Antigen Receptor for Chemokines. Zerfaoui M, etal., J Leukoc Biol. 2009 Dec;86(6):1385-92. Epub 2009 Sep 10.
75. Attenuation of neointima formation through the inhibition of DNA repair enzyme PARP-1 in balloon-injured rat carotid artery. Zhang C, etal., Am J Physiol Heart Circ Physiol. 2004 Aug;287(2):H659-66. Epub 2004 Mar 25.
76. Poly(ADP-ribose) polymerase 1 is a key regulator of estrogen receptor alpha-dependent gene transcription. Zhang F, etal., J Biol Chem. 2013 Apr 19;288(16):11348-57. doi: 10.1074/jbc.M112.429134. Epub 2013 Mar 14.
77. PARP-1 Val762Ala polymorphism, CagA+ H. pylori infection and risk for gastric cancer in Han Chinese population. Zhang Q, etal., Mol Biol Rep. 2009 Jul;36(6):1461-7. Epub 2008 Aug 21.
78. Genetic disruption of poly (ADP-ribose) synthetase inhibits the expression of P-selectin and intercellular adhesion molecule-1 in myocardial ischemia/reperfusion injury. Zingarelli B, etal., Circ Res. 1998 Jul 13;83(1):85-94.
Additional References at PubMed
PMID:1601134   PMID:2508731   PMID:7852410   PMID:9518481   PMID:10082530   PMID:11112786   PMID:11756244   PMID:11906946   PMID:11948190   PMID:12477932   PMID:12675907   PMID:12707040  
PMID:12802178   PMID:12870658   PMID:14580948   PMID:14734561   PMID:14754756   PMID:14770035   PMID:14988256   PMID:15158362   PMID:15489334   PMID:15504977   PMID:15517597   PMID:15564335  
PMID:15565177   PMID:15607978   PMID:15615785   PMID:15674325   PMID:15777284   PMID:16077187   PMID:16107709   PMID:16181422   PMID:16204795   PMID:16207712   PMID:16627622   PMID:16771873  
PMID:17167533   PMID:17177976   PMID:17244536   PMID:17395016   PMID:17396150   PMID:17612561   PMID:17632284   PMID:17766683   PMID:17947304   PMID:17996029   PMID:18053973   PMID:18073140  
PMID:18078960   PMID:18516100   PMID:18782186   PMID:18815186   PMID:18945670   PMID:19131967   PMID:19135898   PMID:19225880   PMID:19303849   PMID:19427306   PMID:19513971   PMID:19521970  
PMID:19764761   PMID:19796622   PMID:19813144   PMID:19854869   PMID:19946888   PMID:20122899   PMID:20177052   PMID:20399804   PMID:20502958   PMID:21270334   PMID:21375507   PMID:21416227  
PMID:21613793   PMID:21635224   PMID:21765948   PMID:22019940   PMID:22153339   PMID:22405498   PMID:22504299   PMID:22555049   PMID:22658674   PMID:22681889   PMID:22736760   PMID:23230272  
PMID:23275542   PMID:23382074   PMID:23481255   PMID:23555743   PMID:23994215   PMID:24151909   PMID:24191052   PMID:24270264   PMID:24289924   PMID:24434514   PMID:24449909   PMID:24550317  
PMID:24954469   PMID:24988468   PMID:25043379   PMID:25378300   PMID:25440363   PMID:25470037   PMID:25634059   PMID:25749521   PMID:25835215   PMID:25868125   PMID:26165350   PMID:26200703  
PMID:26220474   PMID:26344098   PMID:26526840   PMID:26586427   PMID:26963167   PMID:27027354   PMID:27067600   PMID:27248496   PMID:27257257   PMID:27471034   PMID:27686254   PMID:28002403  
PMID:28190768   PMID:28656263   PMID:28698869   PMID:29049980   PMID:29128369   PMID:29278652   PMID:29501586   PMID:29608885   PMID:30030529   PMID:30323296   PMID:30356214   PMID:30898999  
PMID:31178959   PMID:32139662   PMID:32139900   PMID:32338336   PMID:32357304   PMID:33908150   PMID:34020532   PMID:34738744   PMID:35002525   PMID:35190759   PMID:36728307  


Genomics

Comparative Map Data
Parp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81394,839,484 - 94,871,295 (+)NCBIGRCr8
mRatBN7.21392,307,593 - 92,339,406 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1392,307,586 - 92,339,404 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1394,812,753 - 94,844,565 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01396,212,939 - 96,244,750 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01393,387,644 - 93,419,455 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01398,857,255 - 98,889,444 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1398,857,177 - 98,889,716 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013103,859,760 - 103,891,949 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41396,309,670 - 96,341,486 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11396,498,605 - 96,530,421 (+)NCBI
Celera1391,853,812 - 91,885,580 (+)NCBICelera
Cytogenetic Map13q26NCBI
PARP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381226,360,691 - 226,408,093 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1226,360,210 - 226,408,154 (-)EnsemblGRCh38hg38GRCh38
GRCh371226,548,392 - 226,595,794 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361224,615,015 - 224,662,424 (-)NCBINCBI36Build 36hg18NCBI36
Build 341222,855,240 - 222,902,526NCBI
Celera1199,739,310 - 199,786,722 (-)NCBICelera
Cytogenetic Map1q42.12NCBI
HuRef1197,065,678 - 197,113,094 (-)NCBIHuRef
CHM1_11227,821,256 - 227,868,667 (-)NCBICHM1_1
T2T-CHM13v2.01225,548,804 - 225,596,198 (-)NCBIT2T-CHM13v2.0
Parp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391180,396,456 - 180,428,564 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1180,396,489 - 180,428,819 (+)EnsemblGRCm39 Ensembl
GRCm381180,568,891 - 180,600,999 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1180,568,924 - 180,601,254 (+)EnsemblGRCm38mm10GRCm38
MGSCv371182,499,106 - 182,531,385 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361182,405,650 - 182,437,929 (+)NCBIMGSCv36mm8
Celera1187,634,811 - 187,667,071 (+)NCBICelera
Cytogenetic Map1H4NCBI
cM Map184.44NCBI
Parp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955489520,875 - 557,615 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955489520,875 - 557,609 (-)NCBIChiLan1.0ChiLan1.0
PARP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2123,130,083 - 23,178,179 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1123,078,568 - 23,126,669 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01201,820,355 - 201,867,673 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11206,812,981 - 206,860,356 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1206,812,981 - 206,860,356 (-)Ensemblpanpan1.1panPan2
PARP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1738,503,072 - 38,542,556 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl738,503,067 - 38,542,127 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha737,984,470 - 38,024,231 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0738,336,543 - 38,376,496 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl738,336,478 - 38,376,795 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1738,175,521 - 38,215,272 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0738,182,459 - 38,222,219 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0738,453,305 - 38,493,301 (+)NCBIUU_Cfam_GSD_1.0
Parp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934451,599,711 - 51,644,827 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365263,102,039 - 3,147,642 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365263,102,468 - 3,147,601 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PARP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1014,203,160 - 14,241,196 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11014,203,157 - 14,241,164 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21016,598,164 - 16,636,214 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PARP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1253,350,798 - 3,405,040 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660553,353,198 - 3,400,806 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Parp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624807446,647 - 479,069 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624807446,662 - 478,571 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Parp1
96 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:262
Count of miRNA genes:187
Interacting mature miRNAs:206
Transcripts:ENSRNOT00000004232
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1320605871101339738Rat
8655959Pur32Proteinuria QTL 328.4urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)137402391897213863Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1330395351101056920Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1356056920101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131101056920Rat
1641901Alcrsp6Alcohol response QTL 6response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)135236217197362171Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)138897350101631289Rat
2293341Glom15Glomerulus QTL 159.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1374862117101339893Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1361825626106807694Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133124133193395974Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1365103704106807694Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1365103704106807694Rat
4889606Gluco63Glucose level QTL 632.860.003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1380753256106807694Rat

Markers in Region
AW535466  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21392,339,436 - 92,339,561 (+)MAPPERmRatBN7.2
Rnor_6.01398,889,475 - 98,889,599NCBIRnor6.0
Rnor_5.013103,891,980 - 103,892,104UniSTSRnor5.0
RGSC_v3.41396,341,517 - 96,341,641UniSTSRGSC3.4
Celera1391,885,611 - 91,885,735UniSTS
RH 3.4 Map13629.9UniSTS
Cytogenetic Map13q26UniSTS
RH129597  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21392,339,328 - 92,339,548 (+)MAPPERmRatBN7.2
Rnor_6.01398,889,367 - 98,889,586NCBIRnor6.0
Rnor_5.013103,891,872 - 103,892,091UniSTSRnor5.0
RGSC_v3.41396,341,409 - 96,341,628UniSTSRGSC3.4
Celera1391,885,503 - 91,885,722UniSTS
RH 3.4 Map13627.7UniSTS
Cytogenetic Map13q26UniSTS
RH94656  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21392,338,912 - 92,339,022 (+)MAPPERmRatBN7.2
Rnor_6.01398,888,951 - 98,889,060NCBIRnor6.0
Rnor_5.013103,891,456 - 103,891,565UniSTSRnor5.0
RGSC_v3.41396,340,993 - 96,341,102UniSTSRGSC3.4
Celera1391,885,087 - 91,885,196UniSTS
Cytogenetic Map13q26UniSTS
RH138341  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21392,336,624 - 92,336,780 (+)MAPPERmRatBN7.2
Rnor_6.01398,886,663 - 98,886,818NCBIRnor6.0
Rnor_5.013103,889,168 - 103,889,323UniSTSRnor5.0
RGSC_v3.41396,338,705 - 96,338,860UniSTSRGSC3.4
Celera1391,882,799 - 91,882,954UniSTS
RH 3.4 Map13629.6UniSTS
Cytogenetic Map13q26UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 43 57 41 19 41 8 11 74 35 41 11 8
Low
Below cutoff

Sequence


RefSeq Acc Id: ENSRNOT00000004232   ⟹   ENSRNOP00000004232
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1392,307,586 - 92,339,404 (+)Ensembl
Rnor_6.0 Ensembl1398,857,177 - 98,889,716 (+)Ensembl
RefSeq Acc Id: NM_013063   ⟹   NP_037195
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81394,839,484 - 94,871,295 (+)NCBI
mRatBN7.21392,307,593 - 92,339,406 (+)NCBI
Rnor_6.01398,857,255 - 98,889,444 (+)NCBI
Rnor_5.013103,859,760 - 103,891,949 (+)NCBI
RGSC_v3.41396,309,670 - 96,341,486 (+)RGD
Celera1391,853,812 - 91,885,580 (+)RGD
Sequence:
RefSeq Acc Id: NP_037195   ⟸   NM_013063
- UniProtKB: O35937 (UniProtKB/Swiss-Prot),   P27008 (UniProtKB/Swiss-Prot),   A6JGH1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000004232   ⟸   ENSRNOT00000004232
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P27008-F1-model_v2 AlphaFold P27008 1-1014 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699059
Promoter ID:EPDNEW_R9584
Type:initiation region
Name:Parp1_1
Description:poly (ADP-ribose) polymerase 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01398,857,212 - 98,857,272EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:2053 AgrOrtholog
BioCyc Gene G2FUF-17121 BioCyc
Ensembl Genes ENSRNOG00000003084 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOG00055012447 UniProtKB/Swiss-Prot
  ENSRNOG00060006959 UniProtKB/Swiss-Prot
  ENSRNOG00065024216 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000004232 ENTREZGENE
  ENSRNOT00000004232.6 UniProtKB/Swiss-Prot
  ENSRNOT00055021223 UniProtKB/Swiss-Prot
  ENSRNOT00060011409 UniProtKB/Swiss-Prot
  ENSRNOT00065041544 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.20.130 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.20.142.10 UniProtKB/Swiss-Prot
  2.20.25.630 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.1740.10 UniProtKB/Swiss-Prot
  3.40.50.10190 UniProtKB/Swiss-Prot
  3.90.228.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BRCT domain UniProtKB/TrEMBL
  Poly(ADP-ribose) polymerase, regulatory domain UniProtKB/TrEMBL
  Zinc finger, PARP-type UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7107130 IMAGE-MGC_LOAD
InterPro BRCT_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BRCT_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PADR1 UniProtKB/Swiss-Prot
  PADR1_C_dom_sf UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
  PADR1_Zn_ribbon UniProtKB/TrEMBL
  PARP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PARP1-like_PADR1_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Poly(ADP-ribose)pol_cat_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Poly(ADP-ribose)pol_reg_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Poly(ADP-ribose)pol_reg_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WGR_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WGR_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_PARP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_PARP_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:25591 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:93658 IMAGE-MGC_LOAD
NCBI Gene 25591 ENTREZGENE
PANTHER DNA LIGASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  POLY [ADP-RIBOSE] POLYMERASE 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam BRCT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PADR1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PADR1_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PARP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PARP_reg UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WGR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-PARP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PARP1 RGD
PhenoGen Parp1 PhenoGen
PIRSF NAD_ADPRT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE BRCT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PADR1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PARP_ALPHA_HD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PARP_CATALYTIC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PARP_ZN_FINGER_1 UniProtKB/Swiss-Prot
  PARP_ZN_FINGER_2 UniProtKB/Swiss-Prot
  WGR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_PARP_1 UniProtKB/TrEMBL
  ZF_PARP_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000003084 RatGTEx
  ENSRNOG00055012447 RatGTEx
  ENSRNOG00060006959 RatGTEx
  ENSRNOG00065024216 RatGTEx
SMART BRCT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PADR1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WGR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-PARP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP ADP-ribosylation UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BRCT domain UniProtKB/TrEMBL
  Domain of poly(ADP-ribose) polymerase UniProtKB/TrEMBL
  Glucocorticoid receptor-like (DNA-binding domain) UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF142921 UniProtKB/Swiss-Prot
  SSF47587 UniProtKB/Swiss-Prot
  SSF52113 UniProtKB/Swiss-Prot
  WGR domain-like UniProtKB/TrEMBL
UniProt A6JGH1 ENTREZGENE, UniProtKB/TrEMBL
  O35937 ENTREZGENE
  P27008 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary O35937 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-10-30 Parp1  poly (ADP-ribose) polymerase 1  Parp1  poly (ADP-ribose) polymerase family, member 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 Parp1  poly (ADP-ribose) polymerase family, member 1  Adprt  ADP-ribosyltransferase 1  Symbol and Name updated 1299863 APPROVED
2002-11-06 Adprt  ADP-ribosyltransferase 1    ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)  Name updated 625702 APPROVED
2002-06-10 Adprt  ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)      Symbol and Name status set to approved 70586 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_cellular_localization localized to the nucleus 631745
gene_disease may contribute to the pathogenesis of endothelial dysfunction associated with aging and hypertension 631765
gene_function binds to DNA breaks where it catalyzes the poly (ADP-ribose) protein modification 631745
gene_homology gene structure of 23 exons is conserved between rat, human, and mouse homologs 631764
gene_process plays a role in DNA repair and genomic stability 631745