Ap5z1 (adaptor related protein complex 5 subunit zeta 1) - Rat Genome Database

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Gene: Ap5z1 (adaptor related protein complex 5 subunit zeta 1) Rattus norvegicus
Analyze
Symbol: Ap5z1 (Ensembl: AABR07035428.2)
Name: adaptor related protein complex 5 subunit zeta 1
RGD ID: 1593125
Description: Predicted to be involved in double-strand break repair via homologous recombination and endosomal transport. Predicted to be located in cytoplasm and nuclear speck. Predicted to be part of AP-5 adaptor complex. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia and hereditary spastic paraplegia 48. Orthologous to human AP5Z1 (adaptor related protein complex 5 subunit zeta 1); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,4-dinitrotoluene; atrazine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: adaptor-related protein complex 5, zeta 1 subunit; AP-5 complex subunit zeta-1; hypothetical protein LOC641386; KIAA0415
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81217,207,315 - 17,222,975 (-)NCBIGRCr8
mRatBN7.21212,093,834 - 12,109,043 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1212,093,834 - 12,108,511 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1212,896,069 - 12,910,699 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01213,519,300 - 13,533,930 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01212,550,426 - 12,565,056 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01214,161,998 - 14,175,997 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01216,190,603 - 16,204,666 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41212,490,951 - 12,505,621 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1213,876,298 - 13,890,974 (-)NCBICelera
Cytogenetic Map12q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. Comprehensive gene review and curation RGD comprehensive gene curation
5. A genome-scale DNA repair RNAi screen identifies SPG48 as a novel gene associated with hereditary spastic paraplegia. Slabicki M, etal., PLoS Biol. 2010 Jun 29;8(6):e1000408. doi: 10.1371/journal.pbio.1000408.
Additional References at PubMed
PMID:8889548   PMID:15277470   PMID:22022230  


Genomics

Comparative Map Data
Ap5z1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81217,207,315 - 17,222,975 (-)NCBIGRCr8
mRatBN7.21212,093,834 - 12,109,043 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1212,093,834 - 12,108,511 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1212,896,069 - 12,910,699 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01213,519,300 - 13,533,930 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01212,550,426 - 12,565,056 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01214,161,998 - 14,175,997 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01216,190,603 - 16,204,666 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41212,490,951 - 12,505,621 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1213,876,298 - 13,890,974 (-)NCBICelera
Cytogenetic Map12q11NCBI
AP5Z1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3874,775,623 - 4,794,397 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl74,775,615 - 4,794,397 (+)EnsemblGRCh38hg38GRCh38
GRCh3774,815,254 - 4,834,028 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3674,781,790 - 4,797,925 (+)NCBINCBI36Build 36hg18NCBI36
Celera74,774,915 - 4,791,050 (+)NCBICelera
Cytogenetic Map7p22.1NCBI
HuRef74,732,073 - 4,750,836 (+)NCBIHuRef
CHM1_174,815,007 - 4,833,771 (+)NCBICHM1_1
T2T-CHM13v2.074,892,837 - 4,911,604 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v274,861,617 - 4,880,381 (+)NCBI
Ap5z1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395142,448,960 - 142,464,471 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5142,449,699 - 142,464,465 (+)EnsemblGRCm39 Ensembl
GRCm385142,463,207 - 142,478,716 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5142,463,944 - 142,478,710 (+)EnsemblGRCm38mm10GRCm38
MGSCv375142,939,885 - 142,954,669 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365142,716,405 - 142,731,189 (+)NCBIMGSCv36mm8
MGSCv365141,388,952 - 141,403,736 (+)NCBIMGSCv36mm8
Celera5139,518,977 - 139,533,398 (+)NCBICelera
Cytogenetic Map5G2NCBI
cM Map581.53NCBI
Ap5z1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546010,996,796 - 11,009,525 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546010,997,554 - 11,009,435 (-)NCBIChiLan1.0ChiLan1.0
AP5Z1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v269,741,028 - 9,757,768 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1758,066,193 - 58,082,473 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v075,027,987 - 5,044,215 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.175,068,846 - 5,085,087 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl75,068,846 - 5,085,087 (+)Ensemblpanpan1.1panPan2
AP5Z1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1612,847,699 - 12,858,769 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl612,847,713 - 12,858,681 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha614,318,559 - 14,329,556 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0612,984,045 - 12,995,047 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl612,984,048 - 12,994,608 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1612,794,723 - 12,805,737 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0612,727,748 - 12,738,752 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0613,003,941 - 13,014,944 (-)NCBIUU_Cfam_GSD_1.0
Ap5z1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344141,121,273 - 141,132,243 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367651,111,882 - 1,123,316 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367651,112,333 - 1,123,244 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AP5Z1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl33,622,699 - 3,642,412 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.133,622,684 - 3,642,370 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.234,271,069 - 4,289,843 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AP5Z1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12816,852,314 - 16,868,408 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2816,851,998 - 16,868,395 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660905,051,852 - 5,068,163 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ap5z1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474028,509,230 - 28,527,519 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474028,509,979 - 28,527,813 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ap5z1
55 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12119611090Rat
10755457Coatc14Coat color QTL 140.01759coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)12122591684Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12123297788Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)12129333307Rat
1598855Bp294Blood pressure QTL 2943.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12134851688Rat
7411660Foco28Food consumption QTL 2810.90.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)12142110980Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411595Foco9Food consumption QTL 940.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12142450532Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12144465750Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12144503507Rat
2302042Pia38Pristane induced arthritis QTL 383.50.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)12144503507Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12117200546172005Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)6556449546669029Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12610757946669029Rat
1600391Edcs2Endometrial carcinoma susceptibility QTL23.50.01uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)12683319017870186Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)12719673046669029Rat
2293086Iddm30Insulin dependent diabetes mellitus QTL 303.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)12844949028302290Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12852542328064601Rat
1331739Hrtrt14Heart rate QTL 143.56232heart pumping trait (VT:2000009)heart rate (CMO:0000002)12931821612829686Rat
1300157Rf21Renal function QTL 214.4renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)12931821632103380Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)12960327746669029Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121047413746669029Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121047413746669029Rat
1331786Kidm11Kidney mass QTL 113.571kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)121107382524234895Rat
1331755Bp219Blood pressure QTL 2193.041arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382528064557Rat
1331761Bp218Blood pressure QTL 2182.973arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382545055165Rat

Markers in Region
AW520453  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21212,110,191 - 12,110,402 (+)MAPPERmRatBN7.2
Rnor_6.01214,177,678 - 14,177,888NCBIRnor6.0
Rnor_5.01216,206,283 - 16,206,493UniSTSRnor5.0
RGSC_v3.41212,507,302 - 12,507,512UniSTSRGSC3.4
Celera1213,892,655 - 13,892,865UniSTS
RH 3.4 Map12164.2UniSTS
Cytogenetic Map12p11UniSTS
AI463295  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21212,110,372 - 12,110,502 (+)MAPPERmRatBN7.2
Rnor_6.01214,177,859 - 14,177,988NCBIRnor6.0
Rnor_5.01216,206,464 - 16,206,593UniSTSRnor5.0
RGSC_v3.41212,507,483 - 12,507,612UniSTSRGSC3.4
Celera1213,892,836 - 13,892,965UniSTS
Cytogenetic Map12p11UniSTS
RH135250  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21212,097,711 - 12,097,895 (+)MAPPERmRatBN7.2
Rnor_6.01214,165,876 - 14,166,059NCBIRnor6.0
Rnor_5.01216,194,481 - 16,194,664UniSTSRnor5.0
RGSC_v3.41212,494,823 - 12,495,006UniSTSRGSC3.4
Celera1213,880,176 - 13,880,359UniSTS
Cytogenetic Map12p11UniSTS
RH140098  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21212,093,935 - 12,094,139 (+)MAPPERmRatBN7.2
Rnor_6.01214,162,100 - 14,162,303NCBIRnor6.0
Rnor_5.01216,190,705 - 16,190,908UniSTSRnor5.0
RGSC_v3.41212,491,047 - 12,491,250UniSTSRGSC3.4
Celera1213,876,400 - 13,876,603UniSTS
RH 3.4 Map12162.6UniSTS
Cytogenetic Map12p11UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001037220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039089719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039089720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005491669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AI704812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI707081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW251939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF285208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB745877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB745985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB804272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF978310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK840769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR465116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EV779741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ131235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000087860   ⟹   ENSRNOP00000070678
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1212,093,834 - 12,108,511 (-)Ensembl
RefSeq Acc Id: NM_001037220   ⟹   NP_001032297
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81217,207,315 - 17,221,991 (-)NCBI
mRatBN7.21212,093,834 - 12,108,511 (-)NCBI
Rnor_6.01214,161,998 - 14,175,997 (-)NCBI
Rnor_5.01216,190,603 - 16,204,666 (-)NCBI
RGSC_v3.41212,490,951 - 12,505,621 (-)RGD
Celera1213,876,298 - 13,890,974 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039089719   ⟹   XP_038945647
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81217,207,321 - 17,219,676 (-)NCBI
mRatBN7.21212,093,837 - 12,108,497 (-)NCBI
RefSeq Acc Id: XM_039089720   ⟹   XP_038945648
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81217,207,321 - 17,221,369 (-)NCBI
mRatBN7.21212,093,837 - 12,107,889 (-)NCBI
RefSeq Acc Id: XR_005491669
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81217,209,199 - 17,222,975 (-)NCBI
mRatBN7.21212,095,718 - 12,109,043 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001032297 (Get FASTA)   NCBI Sequence Viewer  
  XP_038945647 (Get FASTA)   NCBI Sequence Viewer  
  XP_038945648 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000070678
  ENSRNOP00000070678.2
Reference Protein Sequences
RefSeq Acc Id: NP_001032297   ⟸   NM_001037220
- UniProtKB: A0A0G2JYJ5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_038945647   ⟸   XM_039089719
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038945648   ⟸   XM_039089720
- Peptide Label: isoform X1
RefSeq Acc Id: ENSRNOP00000070678   ⟸   ENSRNOT00000087860

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2JYJ5-F1-model_v2 AlphaFold A0A0G2JYJ5 1-545 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1593125 AgrOrtholog
BioCyc Gene G2FUF-19968 BioCyc
Ensembl Genes ENSRNOG00000056768 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000087860 ENTREZGENE
  ENSRNOT00000087860.2 UniProtKB/TrEMBL
Gene3D-CATH Leucine-rich Repeat Variant UniProtKB/TrEMBL
InterPro AP5Z1 UniProtKB/TrEMBL
  ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
NCBI Gene 641386 ENTREZGENE
PANTHER AP-5 COMPLEX SUBUNIT ZETA-1 UniProtKB/TrEMBL
  PTHR46488 UniProtKB/TrEMBL
Pfam SPG48 UniProtKB/TrEMBL
PhenoGen Ap5z1 PhenoGen
RatGTEx ENSRNOG00000056768 RatGTEx
Superfamily-SCOP SSF48371 UniProtKB/TrEMBL
UniProt A0A0G2JYJ5 ENTREZGENE, UniProtKB/TrEMBL
  A6K1Q4_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-03 Ap5z1  adaptor related protein complex 5 subunit zeta 1  Ap5z1  adaptor-related protein complex 5, zeta 1 subunit  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2013-08-01 Ap5z1  adaptor-related protein complex 5, zeta 1 subunit  Kiaa0415  KIAA0415 protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-20 Kiaa0415  KIAA0415 protein      Symbol and Name status set to provisional 70820 PROVISIONAL