Ap3q_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Ap3q_m (alcohol preference 3 QTL (mouse)) Mus musculus

Symbol: Ap3q_m
Name: alcohol preference 3 QTL (mouse)
RGD ID: 1300537
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm394134,654,451 - 156,860,686MOUSEQTLGRCm39
GRCm384134,569,994 - 156,508,116MOUSEQTLGRCm38
MGSCv374133,944,103 - 155,610,501 (+)MOUSEQTLGRCm37
MGSCv34131,630,009 - 154,300,596RGD
cM Map482.64MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ap3q_mMousealcohol preference  IAGP 5509061 MGIPMID:9726281
Ap3q_mMousebehavior/neurological phenotype  IEA 704405Created by mouse qtl pipelineMGIPMID:9726281

#
Reference Title
Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
PMID:9726281  



1 to 20 of 1323 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1619225Rsrp1arginine/serine rich protein 14134650936134654681Mouse
163707336LOC128925107STARR-seq mESC enhancer starr_116944134657345134659251Mouse
1616766Syf2SYF2 homolog, RNA splicing factor (S. cerevisiae)4134658291134664848Mouse
329965024LOC131340390STARR-seq mESC enhancer starr_116974134746426134748534Mouse
39131075LOC109851611DRG (dorsal root ganglion) regulatory region upstream of Runx34134753022134778939Mouse
10026710Gm42327predicted gene, 423274134771009134778678Mouse
9603087Gm16225predicted gene 162254134845532134847687Mouse
734144Runx3runt related transcription factor 34134847956134905301Mouse
401835626LOC132410364STARR-positive B cell enhancer ABC_E62324134856217134856518Mouse
401832044LOC132410365STARR-positive B cell enhancer ABC_E16594134930709134931010Mouse
163708039LOC128925108CapStarr-seq enhancer MGSCv37_chr4:134762237-1347624204134933633134933816Mouse
62149Clic4chloride intracellular channel 44134941280135000071Mouse
401842197LOC132410366STARR-positive B cell enhancer mm9_chr4:134781869-1347821704134953265134953566Mouse
401832757LOC132410367STARR-positive B cell enhancer ABC_E35284134967666134967967Mouse
401834996LOC132410368STARR-positive B cell enhancer ABC_E79984134969690134969991Mouse
39130492LOC114827890VISTA enhancer mm16484134980778134983461Mouse
401841874LOC132410369STARR-positive B cell enhancer ABC_E5244135000201135000502Mouse
9678888Gm30767predicted gene, 307674135010378135016455Mouse
2311905Gm12983predicted gene 129834135017580135018029Mouse
9665792Gm30701predicted gene, 307014135023920135025636Mouse

1 to 20 of 1323 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match

1 to 10 of 76 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1301267Bcmd2_mB cell maturation defect 2 (mouse)Not determined4133154678150789451Mouse
4142139Adip12_madiposity 12 (mouse)Not determined4124621281156860686Mouse
10047132Albq19_malbuminuria QTL 19 (mouse)Not determined4112824389146824389Mouse
1301525Lmb1_mlupus in MRL and B6 F2 cross (mouse)Not determined4124264957150676858Mouse
14746982Manh56_mmandible shape 56 (mouse)4117815917151815917Mouse
4141623W6q13_mweight 6 weeks QTL 13 (mouse)Not determined88982069140468203Mouse
12910797Pwgrq4_mpre-weaning growth rate QTL 4 (mouse)4105835310141433838Mouse
25314312Syncl2_msynaptonemal complex length 2 (mouse)465718237146584457Mouse
12910794Pwbwq8_mpost-weaning body weight QTL 8 (mouse)4105835310141433838Mouse
1300743Skull6_mskull morphology 6 (mouse)Not determined4111009051145009280Mouse

1 to 10 of 76 rows


Database
Acc Id
Source(s)
MGD MGI:2152430

Note Type Note Reference