Tprg1l (transformation related protein 63 regulated 1 like) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Tprg1l (transformation related protein 63 regulated 1 like) Mus musculus
Analyze
Symbol: Tprg1l (Ensembl: Tprgl)
Name: transformation related protein 63 regulated 1 like (Ensembl:transformation related protein 63 regulated like)
RGD ID: 1622316
MGI Page MGI
Description: Enables calmodulin binding activity and identical protein binding activity. Acts upstream of or within calmodulin dependent kinase signaling pathway; negative regulation of synaptic transmission; and synaptic vesicle docking. Located in presynapse. Is expressed in several structures, including gut; hemolymphoid system gland; male reproductive gland or organ; nervous system; and nose. Orthologous to human TPRG1L (tumor protein p63 regulated 1 like).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1200015A19Rik; mo; mossy fiber terminal-associated vertebrate-specific presynaptic protein; mossy-fiber terminal-associated vertebrate-specific presynaptic protein; mover; RP23-254N4.13; Svap30; synaptic vesicle associated protein of 30 kD; Tprgl; transformation related protein 63 regulated like; tumor protein p63-regulated gene 1-like protein
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Tprgl-ps1   Tprgl-ps2  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394154,241,942 - 154,246,763 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4154,241,942 - 154,245,123 (-)EnsemblGRCm39 Ensembl
GRCm384154,157,485 - 154,162,306 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4154,157,485 - 154,160,666 (-)EnsemblGRCm38mm10GRCm38
MGSCv374153,531,594 - 153,534,793 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364153,001,285 - 153,004,484 (-)NCBIMGSCv36mm8
Celera4156,441,404 - 156,444,603 (-)NCBICelera
Cytogenetic Map4E2NCBI
cM Map483.88NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11591653   PMID:12466851   PMID:12477932   PMID:15489334   PMID:15782199   PMID:16141072  
PMID:16141073   PMID:16944461   PMID:17080482   PMID:17114649   PMID:17869247   PMID:18256694   PMID:21267068   PMID:21873635   PMID:31787876   PMID:32325033   PMID:33431696  


Genomics

Comparative Map Data
Tprg1l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394154,241,942 - 154,246,763 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4154,241,942 - 154,245,123 (-)EnsemblGRCm39 Ensembl
GRCm384154,157,485 - 154,162,306 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4154,157,485 - 154,160,666 (-)EnsemblGRCm38mm10GRCm38
MGSCv374153,531,594 - 153,534,793 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364153,001,285 - 153,004,484 (-)NCBIMGSCv36mm8
Celera4156,441,404 - 156,444,603 (-)NCBICelera
Cytogenetic Map4E2NCBI
cM Map483.88NCBI
TPRG1L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3813,625,015 - 3,630,127 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl13,625,015 - 3,630,127 (+)EnsemblGRCh38hg38GRCh38
GRCh3713,541,579 - 3,546,691 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3613,531,416 - 3,536,555 (+)NCBINCBI36Build 36hg18NCBI36
Celera12,796,682 - 2,801,797 (+)NCBICelera
Cytogenetic Map1p36.32NCBI
HuRef12,837,972 - 2,843,088 (+)NCBIHuRef
CHM1_113,528,259 - 3,533,375 (+)NCBICHM1_1
T2T-CHM13v2.013,135,110 - 3,140,200 (+)NCBIT2T-CHM13v2.0
Tprg1l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85170,004,577 - 170,007,784 (-)NCBIGRCr8
mRatBN7.25164,722,151 - 164,725,358 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5164,710,285 - 164,725,425 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5167,426,253 - 167,429,460 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05169,247,671 - 169,250,878 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05169,210,188 - 169,213,395 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05171,456,299 - 171,459,488 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5171,456,302 - 171,459,488 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05174,938,793 - 174,941,982 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera5162,933,950 - 162,937,177 (-)NCBICelera
Cytogenetic Map5q36NCBI
Tprg1l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554868,007,842 - 8,013,910 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554868,007,678 - 8,013,996 (-)NCBIChiLan1.0ChiLan1.0
TPRG1L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21224,678,694 - 224,683,810 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11223,323,817 - 223,328,909 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v012,296,601 - 2,301,687 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.113,420,294 - 3,425,007 (+)NCBIpanpan1.1PanPan1.1panPan2
TPRG1L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1558,155,178 - 58,159,880 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl558,157,096 - 58,159,880 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha558,166,902 - 58,170,424 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0558,357,363 - 58,360,885 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl558,357,400 - 58,360,877 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1558,371,849 - 58,375,361 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0558,240,675 - 58,244,129 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0558,630,852 - 58,634,383 (+)NCBIUU_Cfam_GSD_1.0
Tprg1l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505829,207,191 - 29,212,194 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936737253,752 - 258,767 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TPRG1L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl665,150,903 - 65,154,429 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1665,150,897 - 65,154,311 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2659,884,843 - 59,888,257 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TPRG1L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120128,057,629 - 128,062,545 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20128,059,137 - 128,062,455 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605432,334,644 - 32,339,575 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tprg1l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248186,850,486 - 6,858,136 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248186,850,479 - 6,857,979 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Tprg1l
204 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1493
Count of miRNA genes:657
Interacting mature miRNAs:783
Transcripts:ENSMUST00000030896, ENSMUST00000105639, ENSMUST00000133165, ENSMUST00000134492, ENSMUST00000136374
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
26884437Sklq13_mskull length QTL 13, 16 week (mouse)457700000155684457Mouse
13503348Bntq18_mbone traits QTL 18 (mouse)4120617848154617995Mouse
10412210Cypr6_mcytokine production 6 (mouse)Not determined4120617848154617995Mouse
4141180Ssic1_msusceptibility to small intestinal cancer 1 (mouse)Not determined120674005154674151Mouse
1300803Sluc6_msusceptibility to lung cancer 6 (mouse)Not determined4120674005154674151Mouse
10043985Stheal12_msoft tissue heal 12 (mouse)Not determined4121342649155342753Mouse
4142061Chlq16_mcirculating hormone level QTL 16 (mouse)Not determined4121342649155342753Mouse
1301452Elsgp1_melevated serum gp70 1 (mouse)Not determined4121342649155342753Mouse
10755531Lymph3_mlymphocyte differential 3 (mouse)4124553483156860686Mouse
1300858Tafat_mtally ho associated mesenteric fat pad weight (mouse)Not determined4124621281156860686Mouse
4142139Adip12_madiposity 12 (mouse)Not determined4124621281156860686Mouse
1301982Pltiq1_mphospholipid transfer protein inducibility QTL 1 (mouse)Not determined4124621281156860686Mouse
1300933Cdcs9_mcytokine deficiency colitis susceptibility 9 (mouse)Not determined4125230872156860686Mouse
1300621Tpnr1_mthermal pain response 1 (mouse)Not determined4125230872156860686Mouse
10045620Heal22_mwound healing/regeneration 22 (mouse)Not determined4125230872156860686Mouse
11533916Mts1_mmammary tumor susceptibility 1 (mouse)4125289325156860686Mouse
10043996Gct5_mgranulosa cell tumorigenesis 5 (mouse)Not determined4127784226156860686Mouse
4142481Gct1_mgranulosa cell tumorigenesis 1 (mouse)Not determined4127784226156860686Mouse
1300874Gasa2_mgastritis type A susceptibility locus 2 (mouse)Not determined4133010494156860686Mouse
4142077Ignpq2_mIgA nephropathy QTL 2 (mouse)Not determined4133676733156860686Mouse
1301108Scon2_msucrose consumption 2 (mouse)Not determined4134654451156860686Mouse
1300537Ap3q_malcohol preference 3 QTL (mouse)Not determined4134654451156860686Mouse
1300780Cocrb16_mcocaine related behavior 16 (mouse)Not determined4138943725156860686Mouse

Markers in Region
UniSTS:235111  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384154,157,845 - 154,158,087UniSTSGRCm38
MGSCv374153,531,954 - 153,532,196UniSTSGRCm37
Celera4156,441,764 - 156,442,006UniSTS
Cytogenetic Map4E2UniSTS
Tprgl  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384154,158,517 - 154,159,291UniSTSGRCm38
MGSCv374153,532,626 - 153,533,400UniSTSGRCm37
Celera4156,442,436 - 156,443,210UniSTS
Cytogenetic Map4E2UniSTS
cM Map4 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_026388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_151647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006539129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AI840915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK176961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK193406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK220054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL806525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC019544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX465212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY739996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000030896   ⟹   ENSMUSP00000030896
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4154,241,942 - 154,245,123 (-)Ensembl
GRCm38.p6 Ensembl4154,157,485 - 154,160,666 (-)Ensembl
RefSeq Acc Id: ENSMUST00000105639   ⟹   ENSMUSP00000101264
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4154,242,813 - 154,245,089 (-)Ensembl
GRCm38.p6 Ensembl4154,158,356 - 154,160,632 (-)Ensembl
RefSeq Acc Id: ENSMUST00000133165
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4154,244,024 - 154,245,063 (-)Ensembl
GRCm38.p6 Ensembl4154,159,567 - 154,160,606 (-)Ensembl
RefSeq Acc Id: ENSMUST00000134492
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4154,242,597 - 154,245,123 (-)Ensembl
GRCm38.p6 Ensembl4154,158,140 - 154,160,666 (-)Ensembl
RefSeq Acc Id: ENSMUST00000136374
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4154,242,930 - 154,244,623 (-)Ensembl
GRCm38.p6 Ensembl4154,158,473 - 154,160,166 (-)Ensembl
RefSeq Acc Id: NM_026388   ⟹   NP_080664
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394154,241,942 - 154,245,141 (-)NCBI
GRCm384154,157,485 - 154,160,684 (-)NCBI
MGSCv374153,531,594 - 153,534,793 (-)RGD
Celera4156,441,404 - 156,444,603 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_151647
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394154,241,942 - 154,245,141 (-)NCBI
GRCm384154,157,485 - 154,160,684 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006539129   ⟹   XP_006539192
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394154,241,942 - 154,246,763 (-)NCBI
GRCm384154,157,485 - 154,162,306 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_080664   ⟸   NM_026388
- UniProtKB: B1AX99 (UniProtKB/Swiss-Prot),   Q8BTC6 (UniProtKB/Swiss-Prot),   Q9DBS2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006539192   ⟸   XM_006539129
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSMUSP00000101264   ⟸   ENSMUST00000105639
RefSeq Acc Id: ENSMUSP00000030896   ⟸   ENSMUST00000030896
Protein Domains
hSac2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9DBS2-F1-model_v2 AlphaFold Q9DBS2 1-266 view protein structure

Promoters
RGD ID:6847791
Promoter ID:MM_ACW:36765
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   MEF_B6
Transcripts:1200015A19RIK.ESEP07-UNSPLICED,   1200015A19RIK.FSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364153,533,279 - 153,533,779 (-)MPROMDB
RGD ID:6834659
Promoter ID:MM_KWN:41080
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:ENSMUST00000105639,   OTTMUST00000024503,   OTTMUST00000024504,   OTTMUST00000024505,   OTTMUST00000024506,   UC008WBL.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364153,534,656 - 153,535,322 (-)MPROMDB
RGD ID:6885722
Promoter ID:EPDNEW_M6312
Type:initiation region
Name:Tprgl_1
Description:Mus musculus transformation related protein 63 regulated like, transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384154,160,666 - 154,160,726EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915058 AgrOrtholog
Ensembl Genes ENSMUSG00000029030 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000030896 ENTREZGENE
  ENSMUST00000030896.15 UniProtKB/Swiss-Prot
  ENSMUST00000105639.4 UniProtKB/TrEMBL
InterPro hSac2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Inositol_phosphatase UniProtKB/Swiss-Prot
  TPRG1-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:67808 UniProtKB/Swiss-Prot
MGD MGI:1915058 ENTREZGENE
NCBI Gene 67808 ENTREZGENE
PANTHER PTHR31108 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TUMOR PROTEIN P63-REGULATED GENE 1-LIKE PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam hSac2 UniProtKB/Swiss-Prot
PhenoGen Tprg1l PhenoGen
PROSITE HSAC2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B1AX95_MOUSE UniProtKB/TrEMBL
  B1AX99 ENTREZGENE
  Q8BTC6 ENTREZGENE
  Q9DBS2 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary B1AX99 UniProtKB/Swiss-Prot
  Q8BTC6 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-06-05 Tprg1l  transformation related protein 63 regulated 1 like  Tprgl  transformation related protein 63 regulated like  Symbol and/or name updated 27372883 PROVISIONAL