Hspb7 (heat shock protein family, member 7 (cardiovascular)) - Rat Genome Database

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Gene: Hspb7 (heat shock protein family, member 7 (cardiovascular)) Mus musculus
Analyze
Symbol: Hspb7
Name: heat shock protein family, member 7 (cardiovascular)
RGD ID: 736092
MGI Page MGI
Description: Enables filamin binding activity. Predicted to be involved in heart development. Located in actin cytoskeleton. Is expressed in several structures, including alimentary system; genitourinary system; integumental system; nervous system; and sensory organ. Orthologous to human HSPB7 (heat shock protein family B (small) member 7).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 27kDa; cardiovascular heat shock protein; cv; cvHsp; heat shock 27kDa protein family, member 7 (cardiovascular); heat shock protein 25 kDa 2 (cardiovascular); heat shock protein beta-7; Hsp25; Hsp25-2; MGC107591; protein p19/6.8
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394141,148,090 - 141,152,621 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4141,148,090 - 141,152,622 (+)EnsemblGRCm39 Ensembl
GRCm384141,420,779 - 141,425,310 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4141,420,779 - 141,425,311 (+)EnsemblGRCm38mm10GRCm38
MGSCv374140,976,694 - 140,981,225 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364140,692,855 - 140,697,386 (+)NCBIMGSCv36mm8
Celera4143,237,268 - 143,241,799 (+)NCBICelera
Cytogenetic Map4D3NCBI
cM Map474.08NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Hspb7Mousechromosome 1p36 deletion syndrome  ISOHSPB7 (Homo sapiens)8554872ClinVar Annotator: match by term: Chromosome 1p36 deletion syndromeClinVar 
Hspb7MouseMoebius syndrome  ISOHSPB7 (Homo sapiens)8554872ClinVar Annotator: match by term: Oromandibular-limb hypogenesis spectrumClinVar 

1 to 20 of 91 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Hspb7Mouse(-)-epigallocatechin 3-gallate decreases expressionISOHSPB7 (Homo sapiens)6480464epigallocatechin gallate results in decreased expression of HSPB7 mRNACTDPMID:18851785
Hspb7Mouse(R)-pantothenic acid increases expressionISOHSPB7 (Homo sapiens)6480464Pantothenic Acid results in increased expression of HSPB7 mRNACTDPMID:19397697
Hspb7Mouse1,2-dimethylhydrazine increases expressionEXP 64804641 and 2-Dimethylhydrazine results in increased expression of HSPB7 mRNACTDPMID:22206623
Hspb7Mouse17alpha-ethynylestradiol increases expressionEXP 6480464Ethinyl Estradiol results in increased expression of HSPB7 mRNACTDPMID:17942748
Hspb7Mouse17alpha-ethynylestradiol multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of HSPB7 mRNACTDPMID:17942748
Hspb7Mouse2,2',5,5'-tetrachlorobiphenyl increases expressionISOHspb7 (Rattus norvegicus)64804642 more ...CTDPMID:23829299
Hspb7Mouse2,3,7,8-tetrachlorodibenzodioxine multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of HSPB7 mRNACTDPMID:17942748
Hspb7Mouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOHspb7 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of HSPB7 mRNACTDPMID:33387578
Hspb7Mouse2,3,7,8-tetrachlorodibenzodioxine affects expressionISOHspb7 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin affects the expression of HSPB7 mRNACTDPMID:32109520
Hspb7Mouse2,3,7,8-tetrachlorodibenzodioxine increases expressionISOHSPB7 (Homo sapiens)6480464Tetrachlorodibenzodioxin results in increased expression of HSPB7 mRNACTDPMID:30096437
Hspb7Mouse2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of HSPB7 mRNACTDPMID:21570461
Hspb7Mouse2,3,7,8-Tetrachlorodibenzofuran decreases expressionISOHspb7 (Rattus norvegicus)64804642 more ...CTDPMID:32109520
Hspb7Mouse2,4,6-trinitrobenzenesulfonic acid multiple interactionsEXP 6480464Curcumin inhibits the reaction [Trinitrobenzenesulfonic Acid results in increased expression of HSPB7 mRNA]CTDPMID:18200517
Hspb7Mouse2,4,6-trinitrobenzenesulfonic acid increases expressionEXP 6480464Trinitrobenzenesulfonic Acid results in increased expression of HSPB7 mRNACTDPMID:18200517
Hspb7Mouse3-chloropropane-1,2-diol increases expressionISOHspb7 (Rattus norvegicus)6480464alpha-Chlorohydrin results in increased expression of HSPB7 proteinCTDPMID:26597043
Hspb7Mouse3-isobutyl-1-methyl-7H-xanthine multiple interactionsISOHSPB7 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin] results in decreased expression of HSPB7 mRNACTDPMID:28628672
Hspb7Mouse4,4'-sulfonyldiphenol increases expressionEXP 6480464bisphenol S results in increased expression of HSPB7 mRNACTDPMID:30951980
Hspb7Mouse4,4'-sulfonyldiphenol increases methylationEXP 6480464bisphenol S results in increased methylation of HSPB7 exonCTDPMID:33297965
Hspb7Mouseacetamiprid decreases expressionISOHspb7 (Rattus norvegicus)6480464acetamiprid results in decreased expression of HSPB7 mRNACTDPMID:27782041
Hspb7Mouseacrylamide decreases expressionISOHspb7 (Rattus norvegicus)6480464Acrylamide results in decreased expression of HSPB7 mRNACTDPMID:28959563

1 to 20 of 91 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Hspb7Mouseheart development involved_inIEAInterPro:IPR0378852290270 InterProGO_REF:0000002

Cellular Component
1 to 11 of 11 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Hspb7Mouseactin cytoskeleton located_inIPIPR:Q8BTM82290270 PMID:10593960MGIPMID:10593960
Hspb7Mouseaggresome located_inISOUniProtKB:Q9UBY92290270 GO_CentralGO_REF:0000119
Hspb7Mouseaggresome located_inIEAUniProtKB:Q9UBY9 and ensembl:ENSP000003101112290270 EnsemblGO_REF:0000107
Hspb7MouseCajal body located_inIEAUniProtKB-SubCell:SL-00312290270 UniProtGO_REF:0000044
Hspb7Mousecytoplasm located_inISOUniProtKB:Q9UBY92290270 GO_CentralGO_REF:0000119
Hspb7Mousecytoplasm is_active_inIBAPANTHER:PTN002930548 and UniProtKB:Q9UBY92290270 GO_CentralGO_REF:0000033
Hspb7Mousemitochondrion located_inHDA 2290270 PMID:18614015MGIPMID:18614015
Hspb7Mousenucleoplasm located_inISOUniProtKB:Q9UBY92290270 GO_CentralGO_REF:0000119
Hspb7Mousenucleus is_active_inIBAPANTHER:PTN002930548 and UniProtKB:Q9UBY92290270 GO_CentralGO_REF:0000033
Hspb7Mousenucleus located_inISOUniProtKB:Q9UBY92290270 GO_CentralGO_REF:0000119
Hspb7Mousenucleus located_inISSUniProtKB:Q9UBY92290270 UniProtGO_REF:0000024
1 to 11 of 11 rows

Molecular Function

  

1 to 20 of 26 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Hspb7Mouseabnormal cardinal vein morphology  IAGP 5509061 MGIPMID:29078393
Hspb7Mouseabnormal diaphragm morphology  IAGP 5509061 MGIPMID:26929074
Hspb7Mouseabnormal fetal cardiomyocyte morphology  IAGP 5509061 MGIPMID:29078393
Hspb7Mouseabnormal forced expiratory flow rates  IAGP 5509061 MGIPMID:26929074
Hspb7Mouseabnormal heart morphology  IAGP 5509061 MGIPMID:29078393
Hspb7Mouseabnormal respiratory function  IAGP 5509061 MGIPMID:26929074
Hspb7Mouseabnormal sarcomere morphology  IAGP 5509061 MGIPMID:26929074
Hspb7Mouseabnormal sarcomere morphology  IAGP 5509061 MGIPMID:29078393
Hspb7Mouseabnormal trabecula carnea morphology  IAGP 5509061 MGIPMID:29078393
Hspb7Mouseabnormal Z line morphology  IAGP 5509061 MGIPMID:29078393
Hspb7Mouseabnormal Z line morphology  IAGP 5509061 MGIPMID:26929074
Hspb7Mousecentrally nucleated skeletal muscle fibers  IAGP 5509061 MGIPMID:26929074
Hspb7Mousecongestive heart failure  IAGP 5509061 MGIPMID:29078393
Hspb7Mousedecreased body weight  IAGP 5509061 MGIPMID:26929074
Hspb7Mousedecreased fetal cardiomyocyte proliferation  IAGP 5509061 MGIPMID:29078393
Hspb7Mousedecreased grip strength  IAGP 5509061 MGIPMID:26929074
Hspb7Mousedecreased heart left ventricle size  IAGP 5509061 MGIPMID:29078393
Hspb7Mousedecreased heart right ventricle wall thickness  IAGP 5509061 MGIPMID:29078393
Hspb7Mouseembryonic lethality during organogenesis, complete penetrance  IAGP 5509061 MGIPMID:29078393
Hspb7Mouseglobular heart  IAGP 5509061 MGIPMID:29078393
1 to 20 of 26 rows

#
Reference Title
Reference Citation
1. Identification and characterization of cvHsp. A novel human small stress protein selectively expressed in cardiovascular and insulin-sensitive tissues. Krief S, etal., J Biol Chem 1999 Dec 17;274(51):36592-600.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:10349636   PMID:10555139   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:12820654   PMID:14681479   PMID:16141072   PMID:16141073   PMID:17661394   PMID:18614015  
PMID:19464326   PMID:20871982   PMID:21267068   PMID:21873635   PMID:22785082   PMID:26929074   PMID:27632998   PMID:28827800   PMID:29078393   PMID:31220272   PMID:36899856  



Hspb7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394141,148,090 - 141,152,621 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4141,148,090 - 141,152,622 (+)EnsemblGRCm39 Ensembl
GRCm384141,420,779 - 141,425,310 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4141,420,779 - 141,425,311 (+)EnsemblGRCm38mm10GRCm38
MGSCv374140,976,694 - 140,981,225 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364140,692,855 - 140,697,386 (+)NCBIMGSCv36mm8
Celera4143,237,268 - 143,241,799 (+)NCBICelera
Cytogenetic Map4D3NCBI
cM Map474.08NCBI
HSPB7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38116,014,029 - 16,019,594 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl116,014,028 - 16,019,594 (-)EnsemblGRCh38hg38GRCh38
GRCh37116,340,524 - 16,346,089 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36116,213,111 - 16,217,538 (-)NCBINCBI36Build 36hg18NCBI36
Build 34116,085,830 - 16,090,257NCBI
Celera114,820,429 - 14,825,190 (-)NCBICelera
Cytogenetic Map1p36.13NCBI
HuRef114,859,583 - 14,864,344 (-)NCBIHuRef
CHM1_1116,139,026 - 16,143,787 (-)NCBICHM1_1
T2T-CHM13v2.0115,455,340 - 15,460,905 (-)NCBIT2T-CHM13v2.0
Hspb7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85159,010,759 - 159,014,245 (+)NCBIGRCr8
mRatBN7.25153,727,782 - 153,731,268 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5153,727,588 - 153,731,266 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5156,414,594 - 156,418,080 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05158,187,880 - 158,191,366 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05158,177,061 - 158,180,547 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05159,968,077 - 159,971,563 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5159,967,839 - 159,971,562 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05163,688,616 - 163,692,102 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45160,311,908 - 160,315,394 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15160,322,230 - 160,322,989 (+)NCBI
Celera5152,089,504 - 152,092,990 (+)NCBICelera
Cytogenetic Map5q36NCBI
Hspb7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555272,219,462 - 2,222,824 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555272,219,462 - 2,222,824 (+)NCBIChiLan1.0ChiLan1.0
HSPB7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21210,902,785 - 210,906,988 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11210,151,188 - 210,155,577 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0115,151,471 - 15,156,234 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1116,144,200 - 16,148,959 (-)NCBIpanpan1.1PanPan1.1panPan2
HSPB7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1281,628,051 - 81,631,939 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl281,619,999 - 81,630,483 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha278,163,485 - 78,167,372 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0282,273,705 - 82,277,606 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl282,273,504 - 82,277,580 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1279,026,872 - 79,030,773 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0280,044,020 - 80,047,921 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0281,111,730 - 81,115,632 (+)NCBIUU_Cfam_GSD_1.0
Hspb7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505837,759,259 - 37,762,650 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364743,583,509 - 3,587,508 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364743,583,999 - 3,587,316 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HSPB7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl675,166,992 - 75,175,013 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1675,171,507 - 75,174,918 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
HSPB7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120116,280,155 - 116,284,982 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20116,280,704 - 116,285,133 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605419,806,487 - 19,811,415 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hspb7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247642,193,778 - 2,197,707 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247642,194,420 - 2,197,713 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Hspb7
249 total Variants

Predicted Target Of
Summary Value
Count of predictions:515
Count of miRNA genes:339
Interacting mature miRNAs:397
Transcripts:ENSMUST00000102486
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 60 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1301267Bcmd2_mB cell maturation defect 2 (mouse)Not determined4133154678150789451Mouse
4142139Adip12_madiposity 12 (mouse)Not determined4124621281156860686Mouse
10047132Albq19_malbuminuria QTL 19 (mouse)Not determined4112824389146824389Mouse
1301525Lmb1_mlupus in MRL and B6 F2 cross (mouse)Not determined4124264957150676858Mouse
14746982Manh56_mmandible shape 56 (mouse)4117815917151815917Mouse
12910797Pwgrq4_mpre-weaning growth rate QTL 4 (mouse)4105835310141433838Mouse
25314312Syncl2_msynaptonemal complex length 2 (mouse)465718237146584457Mouse
12910794Pwbwq8_mpost-weaning body weight QTL 8 (mouse)4105835310141433838Mouse
1300743Skull6_mskull morphology 6 (mouse)Not determined4111009051145009280Mouse
1301382Arvm2_mautoimmune renal vasculitis 2 (mouse)Not determined4107791564141791756Mouse

1 to 10 of 60 rows






Ensembl Acc Id: ENSMUST00000102486   ⟹   ENSMUSP00000099544
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4141,148,090 - 141,152,622 (+)Ensembl
GRCm38.p6 Ensembl4141,420,779 - 141,425,311 (+)Ensembl
RefSeq Acc Id: NM_013868   ⟹   NP_038896
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394141,148,090 - 141,152,621 (+)NCBI
GRCm384141,420,779 - 141,425,310 (+)ENTREZGENE
MGSCv374140,976,694 - 140,981,225 (+)RGD
Celera4143,237,268 - 143,241,799 (+)RGD
cM Map4 ENTREZGENE
Sequence:
1 to 9 of 9 rows
Protein RefSeqs NP_038896 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAF20023 (Get FASTA)   NCBI Sequence Viewer  
  AAH89584 (Get FASTA)   NCBI Sequence Viewer  
  BAC26743 (Get FASTA)   NCBI Sequence Viewer  
  CAB63266 (Get FASTA)   NCBI Sequence Viewer  
  EDL13373 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000099544
  ENSMUSP00000099544.5
GenBank Protein P35385 (Get FASTA)   NCBI Sequence Viewer  
1 to 9 of 9 rows
RefSeq Acc Id: NP_038896   ⟸   NM_013868
- UniProtKB: Q8CDI0 (UniProtKB/Swiss-Prot),   Q5FW72 (UniProtKB/Swiss-Prot),   Q9QUS2 (UniProtKB/Swiss-Prot),   P35385 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000099544   ⟸   ENSMUST00000102486
sHSP

Name Modeler Protein Id AA Range Protein Structure
AF-P35385-F1-model_v2 AlphaFold P35385 1-169 view protein structure

RGD ID:6835482
Promoter ID:MM_KWN:40481
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:OTTMUST00000023971
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364140,977,546 - 140,978,046 (+)MPROMDB
RGD ID:6885310
Promoter ID:EPDNEW_M6106
Type:initiation region
Name:Hspb7_2
Description:Mus musculus heat shock protein family, member 7 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6107  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384141,420,735 - 141,420,795EPDNEW
RGD ID:6885312
Promoter ID:EPDNEW_M6107
Type:multiple initiation site
Name:Hspb7_1
Description:Mus musculus heat shock protein family, member 7 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6106  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384141,421,704 - 141,421,764EPDNEW


1 to 25 of 25 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000006221 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000102486 ENTREZGENE
  ENSMUST00000102486.5 UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.40.790 UniProtKB/Swiss-Prot
InterPro A-crystallin/Hsp20_dom UniProtKB/Swiss-Prot
  ACD_HspB7 UniProtKB/Swiss-Prot
  Alpha-crystallin/HSP UniProtKB/Swiss-Prot
  HSP20-like_chaperone UniProtKB/Swiss-Prot
KEGG Report mmu:29818 UniProtKB/Swiss-Prot
MGD MGI:1352494 ENTREZGENE
NCBI Gene 29818 ENTREZGENE
PANTHER HEAT SHOCK PROTEIN BETA-7 UniProtKB/Swiss-Prot
  HEAT SHOCK PROTEIN BETA-7-RELATED UniProtKB/Swiss-Prot
Pfam HSP20 UniProtKB/Swiss-Prot
PhenoGen Hspb7 PhenoGen
PRINTS ACRYSTALLIN UniProtKB/Swiss-Prot
PROSITE SHSP UniProtKB/Swiss-Prot
Superfamily-SCOP SSF49764 UniProtKB/Swiss-Prot
UniProt HSPB7_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q5FW72 ENTREZGENE
  Q8CDI0 ENTREZGENE
  Q9QUS2 ENTREZGENE
UniProt Secondary Q5FW72 UniProtKB/Swiss-Prot
  Q8CDI0 UniProtKB/Swiss-Prot
  Q9QUS2 UniProtKB/Swiss-Prot
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