Rcan3 (regulator of calcineurin 3) - Rat Genome Database

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Gene: Rcan3 (regulator of calcineurin 3) Mus musculus
Analyze
Symbol: Rcan3
Name: regulator of calcineurin 3
RGD ID: 1323486
MGI Page MGI
Description: Predicted to enable calcium-dependent protein serine/threonine phosphatase regulator activity; phosphatase binding activity; and troponin I binding activity. Predicted to be involved in calcium-mediated signaling. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including brain; genitourinary system; immune system; liver; and stomach. Orthologous to human RCAN3 (RCAN family member 3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AU041093; calcipressin-3; Cs; Csp3; down syndrome candidate region 1-like protein 2; Down syndrome critical region gene 1-like 2; Dscr; Dscr1l2; MCIP3; myocyte-enriched calcineurin-interacting protein 3
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394135,139,619 - 135,161,154 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4135,139,619 - 135,161,164 (-)EnsemblGRCm39 Ensembl
GRCm384135,412,308 - 135,433,871 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4135,412,308 - 135,433,853 (-)EnsemblGRCm38mm10GRCm38
MGSCv374134,968,224 - 134,989,720 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364134,684,384 - 134,697,497 (-)NCBIMGSCv36mm8
Celera4133,613,050 - 133,634,544 (-)NCBICelera
Cytogenetic Map4D3NCBI
cM Map467.59NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA)
nucleus  (IBA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10756093   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11080588   PMID:12477932   PMID:14610273   PMID:15489334   PMID:15870395   PMID:16141072  
PMID:16141073   PMID:17198697   PMID:17595344   PMID:17767500   PMID:18799693   PMID:21267068   PMID:21873635   PMID:25783055   PMID:28077597   PMID:35640493   PMID:38355793  


Genomics

Comparative Map Data
Rcan3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394135,139,619 - 135,161,154 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4135,139,619 - 135,161,164 (-)EnsemblGRCm39 Ensembl
GRCm384135,412,308 - 135,433,871 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4135,412,308 - 135,433,853 (-)EnsemblGRCm38mm10GRCm38
MGSCv374134,968,224 - 134,989,720 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364134,684,384 - 134,697,497 (-)NCBIMGSCv36mm8
Celera4133,613,050 - 133,634,544 (-)NCBICelera
Cytogenetic Map4D3NCBI
cM Map467.59NCBI
RCAN3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38124,502,344 - 24,541,040 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl124,502,351 - 24,541,040 (+)EnsemblGRCh38hg38GRCh38
GRCh37124,828,834 - 24,867,530 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36124,701,974 - 24,735,015 (+)NCBINCBI36Build 36hg18NCBI36
Build 34124,574,692 - 24,607,734NCBI
Celera123,156,569 - 23,189,587 (+)NCBICelera
Cytogenetic Map1p36.11NCBI
HuRef123,084,210 - 23,118,912 (+)NCBIHuRef
CHM1_1124,941,482 - 24,976,104 (+)NCBICHM1_1
T2T-CHM13v2.0124,340,730 - 24,379,427 (+)NCBIT2T-CHM13v2.0
Rcan3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85152,934,561 - 152,955,502 (-)NCBIGRCr8
mRatBN7.25147,650,935 - 147,671,881 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5147,655,085 - 147,671,937 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5150,356,667 - 150,364,986 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05152,128,063 - 152,136,389 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05152,112,951 - 152,121,270 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05153,773,461 - 153,790,271 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5153,773,663 - 153,790,157 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05157,541,771 - 157,558,735 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45154,209,075 - 154,217,368 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15154,219,113 - 154,227,407 (-)NCBI
Celera5146,064,922 - 146,073,086 (-)NCBICelera
Cytogenetic Map5q36NCBI
Rcan3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554524,278,492 - 4,319,396 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554524,285,602 - 4,313,904 (+)NCBIChiLan1.0ChiLan1.0
RCAN3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21202,392,794 - 202,427,520 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11201,496,281 - 201,530,955 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0123,705,271 - 23,739,949 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1124,685,026 - 24,719,741 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl124,690,358 - 24,719,741 (+)Ensemblpanpan1.1panPan2
RCAN3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1275,118,201 - 75,167,309 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl275,127,349 - 75,167,453 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha271,690,677 - 71,740,139 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0275,679,109 - 75,728,360 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl275,689,189 - 75,728,492 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1272,501,210 - 72,550,883 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0273,508,464 - 73,558,344 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0274,512,865 - 74,562,758 (-)NCBIUU_Cfam_GSD_1.0
Rcan3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505843,642,490 - 43,664,959 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364749,467,220 - 9,489,761 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364749,467,249 - 9,489,744 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RCAN3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl682,186,368 - 82,281,641 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1682,186,306 - 82,226,140 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2675,876,783 - 75,927,974 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RCAN3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120108,159,535 - 108,196,693 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20108,157,163 - 108,196,768 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660338,163,190 - 8,200,255 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rcan3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247648,894,316 - 8,930,012 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247648,894,438 - 8,926,222 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rcan3
1319 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1551
Count of miRNA genes:732
Interacting mature miRNAs:916
Transcripts:ENSMUST00000030606, ENSMUST00000132654, ENSMUST00000156635
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301267Bcmd2_mB cell maturation defect 2 (mouse)Not determined4133154678150789451Mouse
4142139Adip12_madiposity 12 (mouse)Not determined4124621281156860686Mouse
10047132Albq19_malbuminuria QTL 19 (mouse)Not determined4112824389146824389Mouse
1301525Lmb1_mlupus in MRL and B6 F2 cross (mouse)Not determined4124264957150676858Mouse
14746982Manh56_mmandible shape 56 (mouse)4117815917151815917Mouse
4141623W6q13_mweight 6 weeks QTL 13 (mouse)Not determined88982069140468203Mouse
12910797Pwgrq4_mpre-weaning growth rate QTL 4 (mouse)4105835310141433838Mouse
25314312Syncl2_msynaptonemal complex length 2 (mouse)465718237146584457Mouse
12910794Pwbwq8_mpost-weaning body weight QTL 8 (mouse)4105835310141433838Mouse
1300743Skull6_mskull morphology 6 (mouse)Not determined4111009051145009280Mouse
1301382Arvm2_mautoimmune renal vasculitis 2 (mouse)Not determined4107791564141791756Mouse
1302149Tlsr2_mthymic lymphoma suppressor region 2 (mouse)Not determined4124264957142230960Mouse
12910813Pwbwq4_mpre-weaning body weight QTL 4 (mouse)4105835310141433838Mouse
1300874Gasa2_mgastritis type A susceptibility locus 2 (mouse)Not determined4133010494156860686Mouse
4141093W3q17_mweight 3 weeks QTL 17 (mouse)Not determined88982069140468203Mouse
27226757Femd1_mfemur midshaft diameter 1, 5 week (mouse)4123993793144326570Mouse
12910808Pwbwq9_mpost-weaning body weight QTL 9 (mouse)4105835310141433838Mouse
1300621Tpnr1_mthermal pain response 1 (mouse)Not determined4125230872156860686Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
4142493Femwf13_mfemur work to failure 13 (mouse)Not determined116154678150154782Mouse
1301815Sles2_msystemic lupus erythmatosus suppressor 2 (mouse)Not determined494957579150676858Mouse
1300663Start2_mstartle response 2 (mouse)Not determined4107264957141265153Mouse
1300917Gasa1_mgastritis type A susceptibility locus 1 (mouse)Not determined4124055093142438020Mouse
1300537Ap3q_malcohol preference 3 QTL (mouse)Not determined4134654451156860686Mouse
1301823Bmd7_mbone mineral density 7 (mouse)Not determined488982069151654550Mouse
10412210Cypr6_mcytokine production 6 (mouse)Not determined4120617848154617995Mouse
1302078Sluc21_msusceptibility to lung cancer 21 (mouse)Not determined4117401141151401275Mouse
10045620Heal22_mwound healing/regeneration 22 (mouse)Not determined4125230872156860686Mouse
4142481Gct1_mgranulosa cell tumorigenesis 1 (mouse)Not determined4127784226156860686Mouse
1301793Tlsr3_mthymic lymphoma suppressor region 3 (mouse)Not determined4129465811136864536Mouse
4141065Shali2_msurvival time to hyperoxic acute lung injury 2 (mouse)Not determined124055093141572792Mouse
13503348Bntq18_mbone traits QTL 18 (mouse)4120617848154617995Mouse
13208562Wght7_mweight 7 (mouse)490888237148084457Mouse
4142082Psds2_mpsoriasis-like skin disease severity 2 (mouse)Not determined4133154678137617995Mouse
1300781Lith8_mlithogenic gene 8 (mouse)Not determined4107264957141265153Mouse
39128212Lwq21_mliver weight QTL 21 (mouse)488982069140468203Mouse
4142077Ignpq2_mIgA nephropathy QTL 2 (mouse)Not determined4133676733156860686Mouse
4141180Ssic1_msusceptibility to small intestinal cancer 1 (mouse)Not determined120674005154674151Mouse
1301584Lrdg2_mlight induced retinal degeneration 2 (mouse)Not determined4129465811151654550Mouse
1302102Bis1_mbeta-carboline-induced seizures 1 (mouse)Not determined4119864433153864536Mouse
10043996Gct5_mgranulosa cell tumorigenesis 5 (mouse)Not determined4127784226156860686Mouse
26884445Sklq7_mskull length QTL 7, 10 week (mouse)468018237150884457Mouse
10043985Stheal12_msoft tissue heal 12 (mouse)Not determined4121342649155342753Mouse
1301982Pltiq1_mphospholipid transfer protein inducibility QTL 1 (mouse)Not determined4124621281156860686Mouse
26884437Sklq13_mskull length QTL 13, 16 week (mouse)457700000155684457Mouse
1300803Sluc6_msusceptibility to lung cancer 6 (mouse)Not determined4120674005154674151Mouse
4141549W10q10_mweight 10 weeks QTL 10 (mouse)Not determined88982069140468203Mouse
4142061Chlq16_mcirculating hormone level QTL 16 (mouse)Not determined4121342649155342753Mouse
1357895Ctrcts_mcataract severity (mouse)Not determined445709925138342753Mouse
1300933Cdcs9_mcytokine deficiency colitis susceptibility 9 (mouse)Not determined4125230872156860686Mouse
1300809Ccrs2_mcorpus callosum hemisphere surface size 2 (mouse)Not determined4107264957141265153Mouse
4141154Nba1_mNew Zealand Black autoimmunity 1 (mouse)Not determined131650724140879275Mouse
1301964Bw8q2_mbody weight at 8 weeks QTL 2 (mouse)Not determined4119864433153864536Mouse
1301452Elsgp1_melevated serum gp70 1 (mouse)Not determined4121342649155342753Mouse
10755520Rbc1_mred blood cell count 1 (mouse)4108477692142477692Mouse
10755521Hct1_mhematocrit 1 (mouse)4108477692142477692Mouse
10755522Hgb1_mhemoglobin 1 (mouse)4108477692142477692Mouse
1301108Scon2_msucrose consumption 2 (mouse)Not determined4134654451156860686Mouse
1300858Tafat_mtally ho associated mesenteric fat pad weight (mouse)Not determined4124621281156860686Mouse
10755531Lymph3_mlymphocyte differential 3 (mouse)4124553483156860686Mouse
15039382Ltgq7_mliver triglyceride QTL 7 (mouse)4105705794139705794Mouse
11533916Mts1_mmammary tumor susceptibility 1 (mouse)4125289325156860686Mouse
15039377Bw45_mbody weight QTL 45 (mouse)4105705794139705794Mouse
1300839Dyscalc2_mdystrophic cardiac calcinosis 2 (mouse)Not determined4111009051145009280Mouse
12880433Fgf23lq1_mFGF23 serum level QTL 1 (mouse)4101157197135157197Mouse
4141001Tgq17_mtriglyceride QTL 17 (mouse)Not determined112523489146523489Mouse
15039378Adip30_madiposity 30 (mouse)4105705794139705794Mouse
1357800Tgq3_mtriglyceride QTL 3 (mouse)Not determined4107055093141055180Mouse
15039385Mvlq3_mmacrovesicular liver lesion QTL 3 (mouse)4112182386146182386Mouse

Markers in Region
Dscr1l2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384135,416,313 - 135,416,553UniSTSGRCm38
MGSCv374134,972,228 - 134,972,468UniSTSGRCm37
Celera4133,617,054 - 133,617,294UniSTS
Cytogenetic Map4D3UniSTS
cM Map467.0UniSTS
AU041093  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384135,412,414 - 135,412,616UniSTSGRCm38
MGSCv374134,968,329 - 134,968,531UniSTSGRCm37
Celera4133,613,155 - 133,613,357UniSTS
Cytogenetic Map4D3UniSTS
cM Map467.0UniSTS
Whitehead/MRC_RH41791.28UniSTS
Rcan3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4D3UniSTS
cM Map467.0UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000030606   ⟹   ENSMUSP00000030606
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4135,139,619 - 135,161,164 (-)Ensembl
GRCm38.p6 Ensembl4135,412,308 - 135,433,853 (-)Ensembl
Ensembl Acc Id: ENSMUST00000132654   ⟹   ENSMUSP00000114220
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4135,139,619 - 135,152,578 (-)Ensembl
GRCm38.p6 Ensembl4135,412,308 - 135,425,267 (-)Ensembl
Ensembl Acc Id: ENSMUST00000156635   ⟹   ENSMUSP00000118447
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4135,145,754 - 135,161,134 (-)Ensembl
GRCm38.p6 Ensembl4135,418,443 - 135,433,823 (-)Ensembl
RefSeq Acc Id: NM_001419054   ⟹   NP_001405983
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,139,619 - 135,161,154 (-)NCBI
RefSeq Acc Id: NM_001419055   ⟹   NP_001405984
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,139,619 - 135,161,154 (-)NCBI
RefSeq Acc Id: NM_001419056   ⟹   NP_001405985
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,139,619 - 135,161,154 (-)NCBI
RefSeq Acc Id: NM_022980   ⟹   NP_075356
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,139,619 - 135,161,154 (-)NCBI
GRCm384135,412,309 - 135,433,805 (-)NCBI
MGSCv374134,968,224 - 134,989,720 (-)RGD
Celera4133,613,050 - 133,634,544 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_075356   ⟸   NM_022980
- Peptide Label: isoform a
- UniProtKB: Q9JKK0 (UniProtKB/Swiss-Prot),   Q3U2I5 (UniProtKB/Swiss-Prot),   Q9CX87 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000114220   ⟸   ENSMUST00000132654
Ensembl Acc Id: ENSMUSP00000030606   ⟸   ENSMUST00000030606
Ensembl Acc Id: ENSMUSP00000118447   ⟸   ENSMUST00000156635
RefSeq Acc Id: NP_001405984   ⟸   NM_001419055
- Peptide Label: isoform b
- UniProtKB: A2A994 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001405983   ⟸   NM_001419054
- Peptide Label: isoform a
- UniProtKB: Q9JKK0 (UniProtKB/Swiss-Prot),   Q3U2I5 (UniProtKB/Swiss-Prot),   Q9CX87 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001405985   ⟸   NM_001419056
- Peptide Label: isoform b
- UniProtKB: A2A994 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9JKK0-F1-model_v2 AlphaFold Q9JKK0 1-239 view protein structure

Promoters
RGD ID:6836038
Promoter ID:MM_KWN:40145
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000022473,   OTTMUST00000022474
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364134,989,586 - 134,990,086 (-)MPROMDB
RGD ID:6885064
Promoter ID:EPDNEW_M5983
Type:initiation region
Name:Rcan3_1
Description:Mus musculus regulator of calcineurin 3 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384135,433,761 - 135,433,821EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1858220 AgrOrtholog
Ensembl Genes ENSMUSG00000059713 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000030606 ENTREZGENE
  ENSMUST00000030606.14 UniProtKB/Swiss-Prot
  ENSMUST00000132654.8 UniProtKB/TrEMBL
  ENSMUST00000156635 ENTREZGENE
  ENSMUST00000156635.2 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.330 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Calcipressin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucleotide-bd_a/b_plait_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RBD_domain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:53902 UniProtKB/Swiss-Prot
MGD MGI:1858220 ENTREZGENE
NCBI Gene 53902 ENTREZGENE
PANTHER PTHR10300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10300:SF6 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Calcipressin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Rcan3 PhenoGen
Superfamily-SCOP SSF54928 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2A994 ENTREZGENE, UniProtKB/TrEMBL
  B0QZL9_MOUSE UniProtKB/TrEMBL
  Q3U2I5 ENTREZGENE
  Q9CX87 ENTREZGENE
  Q9JKK0 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q3U2I5 UniProtKB/Swiss-Prot
  Q9CX87 UniProtKB/Swiss-Prot