Pik3cd (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta) - Rat Genome Database

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Gene: Pik3cd (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta) Mus musculus
Analyze
Symbol: Pik3cd
Name: phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
RGD ID: 1322206
MGI Page MGI
Description: Predicted to enable 1-phosphatidylinositol-3-kinase activity and 1-phosphatidylinositol-4-phosphate 3-kinase activity. Involved in phosphatidylinositol 3-kinase/protein kinase B signal transduction and positive regulation of angiogenesis. Acts upstream of or within several processes, including B cell activation; B cell homeostasis; and defense response to fungus. Predicted to be located in cytosol. Predicted to be part of phosphatidylinositol 3-kinase complex, class IA. Predicted to be active in cytoplasm and plasma membrane. Is expressed in early embryo; hemolymphoid system; nervous system; sensory organ; and testis. Human ortholog(s) of this gene implicated in colorectal cancer; endometrial cancer; and immunodeficiency 14. Orthologous to human PIK3CD (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2410099E07Rik; 2610208K16Rik; AW545373; catalytic phosphatidylinositol 3-kinase delta; p100 delta; p110de; p110delta; phosphatidylinositol 3-kinase catalytic delta polypeptide; phosphatidylinositol 3-kinase catalytic subunit delta; phosphatidylinositol 3-kinase p110 delta; phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform; phosphatidylinositol-4,5-bisphosphate 3-kinase 110 kDa catalytic subunit delta; phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta isoform; phosphoinositide 3 kinase P110delta; PI3-kinase subunit delta; PI3K-delta; PI3Kdelta; ptdIns-3-kinase subunit delta; ptdIns-3-kinase subunit p110-delta; RIKEN cDNA 2610208K16 gene
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394149,733,625 - 149,787,023 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4149,733,625 - 149,787,028 (-)EnsemblGRCm39 Ensembl
GRCm384149,649,168 - 149,702,566 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4149,649,168 - 149,702,571 (-)EnsemblGRCm38mm10GRCm38
MGSCv374149,023,277 - 149,075,738 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364148,492,968 - 148,542,489 (-)NCBIMGSCv36mm8
Celera4151,915,787 - 151,968,568 (-)NCBICelera
Cytogenetic Map4E2NCBI
cM Map480.15NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1,2-dichloroethane  (EXP)
17beta-estradiol  (ISO)
17beta-estradiol 3-benzoate  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-butoxyethanol  (EXP)
3,3',5-triiodo-L-thyronine  (EXP)
3-methylcholanthrene  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxynon-2-enal  (EXP)
4-nitrophenol  (EXP)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (ISO)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
benzene  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[e]pyrene  (ISO)
bis(2-chloroethyl) sulfide  (EXP)
bisphenol A  (EXP,ISO)
buta-1,3-diene  (EXP)
C60 fullerene  (ISO)
cadmium dichloride  (EXP)
calcium atom  (EXP)
calcium(0)  (EXP)
cannabidiol  (ISO)
carbamazepine  (ISO)
carmustine  (ISO)
celastrol  (ISO)
chlormequat chloride  (ISO)
chloroprene  (EXP)
chlorpyrifos  (EXP,ISO)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (ISO)
diclofenac  (ISO)
dicrotophos  (ISO)
dioxygen  (ISO)
diquat  (EXP)
Doramectin  (ISO)
elemental selenium  (ISO)
entinostat  (ISO)
ethanol  (EXP)
ethyl methanesulfonate  (ISO)
fonofos  (ISO)
gedunin  (ISO)
genistein  (ISO)
gentamycin  (ISO)
glycyrrhetinate  (EXP)
glycyrrhetinic acid  (EXP)
glycyrrhizinic acid  (EXP)
IC-87114  (EXP)
idelalisib  (EXP)
lead diacetate  (EXP)
lipopolysaccharide  (ISO)
LY294002  (EXP)
methapyrilene  (ISO)
methyl methanesulfonate  (ISO)
N-nitrosodimethylamine  (ISO)
nickel atom  (ISO)
obeticholic acid  (ISO)
ochratoxin A  (ISO)
ozone  (EXP,ISO)
parathion  (ISO)
pentachlorophenol  (EXP)
phenol  (ISO)
phorbol 13-acetate 12-myristate  (EXP)
potassium chromate  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
selenium atom  (ISO)
silicon dioxide  (EXP)
sirolimus  (EXP)
sodium arsenite  (EXP,ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
tamibarotene  (ISO)
temozolomide  (ISO)
terbufos  (ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
tetracycline  (EXP)
thioacetamide  (ISO)
toluene 2,4-diisocyanate  (EXP)
Tributyltin oxide  (ISO)
trichostatin A  (ISO)
triptonide  (EXP)
tungsten  (EXP)
Tylophorine  (ISO)
valproic acid  (ISO)
vitamin E  (ISO)
wortmannin  (EXP)
Yessotoxin  (ISO)
zearalenone  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
acute myeloid leukemia pathway   (IEA)
aldosterone signaling pathway  (IEA)
apoptotic cell death pathway  (IEA)
B cell receptor signaling pathway  (IEA)
ceramide signaling pathway  (IEA)
Chagas disease pathway  (IEA)
chronic myeloid leukemia pathway   (IEA)
colorectal cancer pathway   (IEA)
endometrial cancer pathway  (IEA)
Entamoebiasis pathway   (IEA)
epidermal growth factor/neuregulin signaling pathway   (IEA,ISO)
FasL mediated signaling pathway  (ISO)
glioma pathway  (IEA)
hepatitis C pathway  (IEA)
influenza A pathway  (IEA)
inositol phosphate metabolic pathway   (IEA)
insulin signaling pathway   (IEA)
Jak-Stat signaling pathway  (IEA)
measles pathway  (IEA)
melanoma pathway   (IEA)
mTOR signaling pathway  (IEA)
neurotrophic factor signaling pathway   (IEA)
non-small cell lung carcinoma pathway   (IEA)
pancreatic cancer pathway  (IEA)
phosphatidylinositol 3-kinase class I signaling pathway  (ISO)
phosphatidylinositol 3-kinase signaling pathway   (IEA)
phosphatidylinositol 3-kinase-Akt signaling pathway  (IMP,ISO)
phosphoinositide metabolic pathway  (ISO)
platelet-derived growth factor signaling pathway   (ISO)
prostate cancer pathway   (IEA)
renal cell carcinoma pathway  (IEA)
small cell lung carcinoma pathway  (IEA)
T cell receptor signaling pathway   (IEA)
Toll-like receptor signaling pathway  (IEA)
toxoplasmosis pathway   (IEA)
Trail mediated signaling pathway   (ISO)
type 2 diabetes mellitus pathway   (IEA)
vascular endothelial growth factor signaling pathway  (IEA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal adaptive immunity  (IAGP)
abnormal B cell differentiation  (IAGP)
abnormal B cell physiology  (IAGP)
abnormal class switch recombination  (IAGP)
abnormal humoral immune response  (IAGP)
abnormal intestinal epithelium morphology  (IAGP)
abnormal intestinal mucosa morphology  (IAGP)
abnormal NK cell differentiation  (IAGP)
abnormal Peyer's patch germinal center morphology  (IAGP)
abnormal platelet aggregation  (IAGP)
abnormal T cell differentiation  (IAGP)
abnormal T cell physiology  (IAGP)
abnormal thymus lobule morphology  (IAGP)
absent B-1 B cells  (IAGP)
absent spleen germinal center  (IAGP)
crypts of Lieberkuhn abscesses  (IAGP)
decreased B cell number  (IAGP)
decreased B cell proliferation  (IAGP)
decreased B-1 B cell number  (IAGP)
decreased B-1a cell number  (IEA)
decreased B-2 B cell number  (IAGP)
decreased CD4-positive, alpha-beta T cell number  (IAGP)
decreased CD8-positive, alpha-beta T cell number  (IAGP)
decreased cytotoxic T cell cytolysis  (IAGP)
decreased double-positive T cell number  (IAGP)
decreased follicular B cell number  (IAGP)
decreased germinal center B cell number  (IAGP)
decreased IgA level  (IAGP)
decreased IgG level  (IEA)
decreased IgG1 level  (IAGP)
decreased IgG2a level  (IAGP)
decreased IgG2b level  (IAGP)
decreased IgG3 level  (IAGP)
decreased IgM level  (IAGP)
decreased immunoglobulin level  (IAGP)
decreased inflammatory response  (IAGP)
decreased interferon-gamma secretion  (IAGP)
decreased lymphocyte cell number  (IAGP)
decreased marginal zone B cell number  (IAGP)
decreased mature B cell number  (IAGP)
decreased NK cell number  (IAGP)
decreased response to antigen  (IEA)
decreased spleen germinal center number  (IAGP)
decreased spleen germinal center size  (IAGP)
decreased susceptibility to induced arthritis  (IAGP)
decreased T cell number  (IAGP)
decreased T follicular helper cell number  (IAGP)
impaired hematopoiesis  (IEA)
impaired neutrophil chemotaxis  (IAGP)
impaired neutrophil recruitment  (IAGP)
increased circulating interferon-alpha level  (IEA)
increased IgE level  (IAGP)
increased leukocyte cell number  (IEA)
increased lymphocyte cell number  (IEA)
increased marginal zone B cell number  (IAGP)
increased neutrophil cell number  (IAGP)
increased response to antigen  (IEA)
increased susceptibility to Herpesvirales infection  (IEA)
intestinal inflammation  (IAGP)
small lymph nodes  (IAGP)
small spleen  (IAGP)
small thymus  (IAGP)
spleen hypoplasia  (IAGP)
thymus hypoplasia  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Phosphoinositide 3-kinases as a common platform for multi-hormone signaling. Hirsch E, etal., J Endocrinol. 2007 Aug;194(2):243-56.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. Pharmacological inhibition of p110δ subunit of PI3K confers protection against experimental leishmaniasis. Khadem F, etal., J Antimicrob Chemother. 2017 Feb;72(2):467-477. doi: 10.1093/jac/dkw448. Epub 2016 Dec 20.
4. Neuregulin 1-ErbB4-PI3K signaling in schizophrenia and phosphoinositide 3-kinase-p110δ inhibition as a potential therapeutic strategy. Law AJ, etal., Proc Natl Acad Sci U S A. 2012 Jul 24;109(30):12165-70. doi: 10.1073/pnas.1206118109. Epub 2012 Jun 11.
5. MGDs mouse GO annotations MGD data from the GO Consortium
6. MGD IEA MGD IEA
7. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
8. Deficiency of Phosphatidylinositol 3-Kinase δ Signaling Leads to Diminished Numbers of Regulatory T Cells and Increased Neutrophil Activity Resulting in Mortality Due to Endotoxic Shock. Okeke EB, etal., J Immunol. 2017 Aug 1;199(3):1086-1095. doi: 10.4049/jimmunol.1600954. Epub 2017 Jun 28.
9. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
10. PI3Kδ Regulates the Magnitude of CD8+ T Cell Responses after Challenge with Listeria monocytogenes. Pearce VQ, etal., J Immunol. 2015 Oct 1;195(7):3206-17. doi: 10.4049/jimmunol.1501227. Epub 2015 Aug 26.
11. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
12. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
13. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
14. The p110δ isoforme of phosphatidylinositol 3-kinase plays an important role in host defense against chlamydial lung infection through influencing CD4+ T-cell function. Qiao S, etal., Pathog Dis. 2018 Aug 1;76(6). pii: 5035814. doi: 10.1093/femspd/fty053.
15. Role of PI3Kdelta and PI3Kgamma in inflammatory arthritis and tissue localization of neutrophils. Randis TM, etal., Eur J Immunol. 2008 May;38(5):1215-24.
16. Mouse MP Annotation Import Pipeline RGD automated import pipeline
17. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
18. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
19. Primate-specific miR-663 functions as a tumor suppressor by targeting PIK3CD and predicts the prognosis of human glioblastoma. Shi Y, etal., Clin Cancer Res. 2014 Apr 1;20(7):1803-13. doi: 10.1158/1078-0432.CCR-13-2284. Epub 2014 Feb 12.
20. PI3Kδ hyper-activation promotes development of B cells that exacerbate Streptococcus pneumoniae infection in an antibody-independent manner. Stark AK, etal., Nat Commun. 2018 Aug 9;9(1):3174. doi: 10.1038/s41467-018-05674-8.
21. Aberrant methylation of ERBB pathway genes in sporadic colorectal cancer. Szmida E, etal., J Appl Genet. 2015 May;56(2):185-92. doi: 10.1007/s13353-014-0253-6. Epub 2014 Nov 1.
22. PIK3R1 (p85a) is somatically mutated at high frequency in primary endometrial cancer. Urick ME, etal., Cancer Res. 2011 Jun 15;71(12):4061-7. doi: 10.1158/0008-5472.CAN-11-0549. Epub 2011 Apr 8.
Additional References at PubMed
PMID:8889548   PMID:9235916   PMID:9434625   PMID:9927325   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11162674   PMID:11544199   PMID:12130661   PMID:12235209  
PMID:12446777   PMID:12477932   PMID:12774123   PMID:12927784   PMID:14610273   PMID:14681479   PMID:14751923   PMID:15494016   PMID:15496927   PMID:15739165   PMID:15769890   PMID:15782199  
PMID:15834429   PMID:16011964   PMID:16114097   PMID:16116162   PMID:16141072   PMID:16141073   PMID:16179367   PMID:16304053   PMID:16514418   PMID:16625210   PMID:17015696   PMID:17082571  
PMID:17170126   PMID:17236236   PMID:17277100   PMID:17277138   PMID:17371233   PMID:17581634   PMID:17618288   PMID:17626838   PMID:17632516   PMID:17644738   PMID:17673465   PMID:17723215  
PMID:17846664   PMID:17920279   PMID:18006698   PMID:18178811   PMID:18191593   PMID:18250464   PMID:18259608   PMID:18276774   PMID:18287559   PMID:18354181   PMID:18367611   PMID:18391955  
PMID:18449193   PMID:18590694   PMID:18684865   PMID:18755982   PMID:18786920   PMID:18799693   PMID:18809712   PMID:19013287   PMID:19014771   PMID:19016531   PMID:19033389   PMID:19047410  
PMID:19297623   PMID:19357769   PMID:19362372   PMID:19451552   PMID:19596993   PMID:19843950   PMID:19940148   PMID:20019835   PMID:20038597   PMID:20081091   PMID:20154209   PMID:20200404  
PMID:20299514   PMID:20505158   PMID:20534549   PMID:20699475   PMID:20826752   PMID:20837769   PMID:20942845   PMID:21188463   PMID:21257963   PMID:21267068   PMID:21295499   PMID:21390242  
PMID:21390257   PMID:21474346   PMID:21487106   PMID:21540297   PMID:21725061   PMID:21731673   PMID:21827948   PMID:21873635   PMID:21930962   PMID:22020336   PMID:22084313   PMID:22422878  
PMID:22427531   PMID:22479345   PMID:22537464   PMID:22586351   PMID:22586681   PMID:22808277   PMID:22972933   PMID:23012430   PMID:23023391   PMID:23024273   PMID:23029326   PMID:23183047  
PMID:23499492   PMID:23706742   PMID:23820902   PMID:24009720   PMID:24043760   PMID:24213578   PMID:24357053   PMID:24470500   PMID:24553178   PMID:24625684   PMID:24634494   PMID:24919154  
PMID:24935930   PMID:25327288   PMID:25503990   PMID:25631052   PMID:25660021   PMID:25875604   PMID:25921527   PMID:25964052   PMID:26324350   PMID:26371254   PMID:26431158   PMID:26442967  
PMID:26711346   PMID:26740009   PMID:26883061   PMID:27194783   PMID:27256596   PMID:27270400   PMID:27306493   PMID:27442134   PMID:27531651   PMID:27843137   PMID:27859053   PMID:28108509  
PMID:28190771   PMID:28199309   PMID:28645939   PMID:28710412   PMID:28851839   PMID:29038423   PMID:29759484   PMID:30018075   PMID:30127432   PMID:30194267   PMID:30457982   PMID:30550785  
PMID:30666254   PMID:30738173   PMID:30930171   PMID:31120863   PMID:31216371   PMID:31363064   PMID:31546615   PMID:31691624   PMID:31841125   PMID:31915155   PMID:32325033   PMID:32414808  
PMID:32641742   PMID:33000201   PMID:33159421   PMID:33763075   PMID:33773208   PMID:34162771   PMID:34220851   PMID:34321999   PMID:34380646   PMID:34586341   PMID:34644563   PMID:35742807  
PMID:35781329   PMID:35851857   PMID:36341455   PMID:36812307   PMID:36943234   PMID:38182748   PMID:38365134  


Genomics

Comparative Map Data
Pik3cd
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394149,733,625 - 149,787,023 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4149,733,625 - 149,787,028 (-)EnsemblGRCm39 Ensembl
GRCm384149,649,168 - 149,702,566 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4149,649,168 - 149,702,571 (-)EnsemblGRCm38mm10GRCm38
MGSCv374149,023,277 - 149,075,738 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364148,492,968 - 148,542,489 (-)NCBIMGSCv36mm8
Celera4151,915,787 - 151,968,568 (-)NCBICelera
Cytogenetic Map4E2NCBI
cM Map480.15NCBI
PIK3CD
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3819,627,258 - 9,729,114 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl19,629,889 - 9,729,114 (+)EnsemblGRCh38hg38GRCh38
GRCh3719,711,789 - 9,789,172 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3619,634,377 - 9,711,759 (+)NCBINCBI36Build 36hg18NCBI36
Build 3419,646,068 - 9,723,240NCBI
Celera18,862,699 - 8,900,443 (+)NCBICelera
Cytogenetic Map1p36.22NCBI
HuRef18,867,937 - 8,945,277 (+)NCBIHuRef
CHM1_119,700,330 - 9,777,708 (+)NCBICHM1_1
T2T-CHM13v2.019,170,040 - 9,271,897 (+)NCBIT2T-CHM13v2.0
Pik3cd
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85165,377,994 - 165,426,620 (-)NCBIGRCr8
mRatBN7.25160,094,952 - 160,142,962 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5160,094,952 - 160,120,930 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5162,811,574 - 162,837,548 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05164,630,975 - 164,656,844 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05164,587,341 - 164,613,203 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05166,602,053 - 166,628,028 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5166,602,053 - 166,628,028 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05170,248,202 - 170,274,177 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45166,735,274 - 166,761,189 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15166,747,134 - 166,774,251 (-)NCBI
Celera5158,364,393 - 158,390,431 (-)NCBICelera
Cytogenetic Map5q36NCBI
Pik3cd
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554863,813,923 - 3,838,119 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554863,813,923 - 3,837,563 (-)NCBIChiLan1.0ChiLan1.0
PIK3CD
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21218,491,653 - 218,569,742 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11217,137,299 - 217,214,394 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v018,418,570 - 8,495,435 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.119,683,626 - 9,724,641 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl19,686,208 - 9,724,633 (+)Ensemblpanpan1.1panPan2
PIK3CD
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1562,884,596 - 62,936,882 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl562,909,009 - 62,935,971 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha562,900,181 - 62,953,014 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0563,111,143 - 63,163,978 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl563,093,394 - 63,164,766 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1563,132,926 - 63,185,725 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0562,972,335 - 63,025,149 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0563,376,064 - 63,428,899 (+)NCBIUU_Cfam_GSD_1.0
Pik3cd
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505833,167,388 - 33,211,355 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049366233,672,201 - 3,696,959 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PIK3CD
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl670,026,373 - 70,084,742 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1670,026,254 - 70,086,950 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2664,031,598 - 64,091,037 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PIK3CD
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120122,040,131 - 122,111,397 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20122,041,963 - 122,078,504 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605426,005,112 - 26,077,450 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pik3cd
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248182,751,724 - 2,779,999 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248182,751,724 - 2,789,145 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Pik3cd
304 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:4395
Count of miRNA genes:749
Interacting mature miRNAs:979
Transcripts:ENSMUST00000038859, ENSMUST00000105688, ENSMUST00000105689, ENSMUST00000105690, ENSMUST00000118704, ENSMUST00000122059, ENSMUST00000124510, ENSMUST00000127273, ENSMUST00000131224, ENSMUST00000134534, ENSMUST00000137430, ENSMUST00000146612, ENSMUST00000156309, ENSMUST00000177654
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13503348Bntq18_mbone traits QTL 18 (mouse)4120617848154617995Mouse
1301823Bmd7_mbone mineral density 7 (mouse)Not determined488982069151654550Mouse
1301108Scon2_msucrose consumption 2 (mouse)Not determined4134654451156860686Mouse
1300553Athsq1_matherosclerosis susceptibility QTL 1 (mouse)Not determined4137617848151654550Mouse
4142493Femwf13_mfemur work to failure 13 (mouse)Not determined116154678150154782Mouse
1302102Bis1_mbeta-carboline-induced seizures 1 (mouse)Not determined4119864433153864536Mouse
10045620Heal22_mwound healing/regeneration 22 (mouse)Not determined4125230872156860686Mouse
4142481Gct1_mgranulosa cell tumorigenesis 1 (mouse)Not determined4127784226156860686Mouse
4142139Adip12_madiposity 12 (mouse)Not determined4124621281156860686Mouse
1301982Pltiq1_mphospholipid transfer protein inducibility QTL 1 (mouse)Not determined4124621281156860686Mouse
1300933Cdcs9_mcytokine deficiency colitis susceptibility 9 (mouse)Not determined4125230872156860686Mouse
1301964Bw8q2_mbody weight at 8 weeks QTL 2 (mouse)Not determined4119864433153864536Mouse
1301267Bcmd2_mB cell maturation defect 2 (mouse)Not determined4133154678150789451Mouse
1300537Ap3q_malcohol preference 3 QTL (mouse)Not determined4134654451156860686Mouse
1302078Sluc21_msusceptibility to lung cancer 21 (mouse)Not determined4117401141151401275Mouse
1300874Gasa2_mgastritis type A susceptibility locus 2 (mouse)Not determined4133010494156860686Mouse
14746982Manh56_mmandible shape 56 (mouse)4117815917151815917Mouse
11533916Mts1_mmammary tumor susceptibility 1 (mouse)4125289325156860686Mouse
10412210Cypr6_mcytokine production 6 (mouse)Not determined4120617848154617995Mouse
1301452Elsgp1_melevated serum gp70 1 (mouse)Not determined4121342649155342753Mouse
10755531Lymph3_mlymphocyte differential 3 (mouse)4124553483156860686Mouse
10043996Gct5_mgranulosa cell tumorigenesis 5 (mouse)Not determined4127784226156860686Mouse
1301584Lrdg2_mlight induced retinal degeneration 2 (mouse)Not determined4129465811151654550Mouse
4142077Ignpq2_mIgA nephropathy QTL 2 (mouse)Not determined4133676733156860686Mouse
1301815Sles2_msystemic lupus erythmatosus suppressor 2 (mouse)Not determined494957579150676858Mouse
1300858Tafat_mtally ho associated mesenteric fat pad weight (mouse)Not determined4124621281156860686Mouse
1300621Tpnr1_mthermal pain response 1 (mouse)Not determined4125230872156860686Mouse
10043985Stheal12_msoft tissue heal 12 (mouse)Not determined4121342649155342753Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
4141180Ssic1_msusceptibility to small intestinal cancer 1 (mouse)Not determined120674005154674151Mouse
4142061Chlq16_mcirculating hormone level QTL 16 (mouse)Not determined4121342649155342753Mouse
1301525Lmb1_mlupus in MRL and B6 F2 cross (mouse)Not determined4124264957150676858Mouse
1300780Cocrb16_mcocaine related behavior 16 (mouse)Not determined4138943725156860686Mouse
26884445Sklq7_mskull length QTL 7, 10 week (mouse)468018237150884457Mouse
1300803Sluc6_msusceptibility to lung cancer 6 (mouse)Not determined4120674005154674151Mouse
26884437Sklq13_mskull length QTL 13, 16 week (mouse)457700000155684457Mouse
4141184Tb2r1_mTGF-beta2 responsiveness 1 (mouse)Not determined137674005150676858Mouse

Markers in Region
AW545373  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384149,649,221 - 149,649,308UniSTSGRCm38
MGSCv374149,023,330 - 149,023,417UniSTSGRCm37
Celera4151,915,840 - 151,915,927UniSTS
Cytogenetic Map4E2UniSTS
UniSTS:235099  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384149,650,078 - 149,650,174UniSTSGRCm38
MGSCv374149,024,187 - 149,024,283UniSTSGRCm37
Celera4151,916,697 - 151,916,793UniSTS
Cytogenetic Map4E2UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001029837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001164049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001164050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001164051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001164052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_008840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030253313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030253314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030253315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF532989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ292985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ292987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ292988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ292989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ292990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ292991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ292992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ292993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ292994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ292995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ292996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ292997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ292998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ292999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ293000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ293001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ293002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ293003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ293004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ293005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ293006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ293007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK040867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL607078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL626808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW124359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC035203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY194349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB248733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF164288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT010349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU207384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU459142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U86587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000038859   ⟹   ENSMUSP00000036434
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4149,733,625 - 149,783,155 (-)Ensembl
GRCm38.p6 Ensembl4149,649,168 - 149,698,698 (-)Ensembl
RefSeq Acc Id: ENSMUST00000105688   ⟹   ENSMUSP00000101313
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4149,734,274 - 149,783,062 (-)Ensembl
GRCm38.p6 Ensembl4149,649,817 - 149,698,605 (-)Ensembl
RefSeq Acc Id: ENSMUST00000105689   ⟹   ENSMUSP00000101314
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4149,735,097 - 149,747,741 (-)Ensembl
GRCm38.p6 Ensembl4149,650,640 - 149,663,284 (-)Ensembl
RefSeq Acc Id: ENSMUST00000105690   ⟹   ENSMUSP00000101315
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4149,733,625 - 149,783,165 (-)Ensembl
GRCm38.p6 Ensembl4149,649,168 - 149,698,708 (-)Ensembl
RefSeq Acc Id: ENSMUST00000118704   ⟹   ENSMUSP00000112863
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4149,733,628 - 149,760,501 (-)Ensembl
GRCm38.p6 Ensembl4149,649,171 - 149,676,044 (-)Ensembl
RefSeq Acc Id: ENSMUST00000122059   ⟹   ENSMUSP00000113844
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4149,733,627 - 149,786,047 (-)Ensembl
GRCm38.p6 Ensembl4149,649,170 - 149,701,590 (-)Ensembl
RefSeq Acc Id: ENSMUST00000124510
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4149,758,222 - 149,786,047 (-)Ensembl
GRCm38.p6 Ensembl4149,673,765 - 149,701,590 (-)Ensembl
RefSeq Acc Id: ENSMUST00000127273   ⟹   ENSMUSP00000119858
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4149,744,235 - 149,759,643 (-)Ensembl
GRCm38.p6 Ensembl4149,659,778 - 149,675,186 (-)Ensembl
RefSeq Acc Id: ENSMUST00000131224   ⟹   ENSMUSP00000115542
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4149,744,314 - 149,760,082 (-)Ensembl
GRCm38.p6 Ensembl4149,659,857 - 149,675,625 (-)Ensembl
RefSeq Acc Id: ENSMUST00000134534   ⟹   ENSMUSP00000118988
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4149,744,641 - 149,783,009 (-)Ensembl
GRCm38.p6 Ensembl4149,660,184 - 149,698,552 (-)Ensembl
RefSeq Acc Id: ENSMUST00000137430
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4149,757,896 - 149,760,550 (-)Ensembl
GRCm38.p6 Ensembl4149,673,439 - 149,676,093 (-)Ensembl
RefSeq Acc Id: ENSMUST00000146612   ⟹   ENSMUSP00000121843
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4149,744,476 - 149,783,061 (-)Ensembl
GRCm38.p6 Ensembl4149,660,019 - 149,698,604 (-)Ensembl
RefSeq Acc Id: ENSMUST00000156309   ⟹   ENSMUSP00000115716
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4149,747,610 - 149,787,028 (-)Ensembl
GRCm38.p6 Ensembl4149,663,153 - 149,702,571 (-)Ensembl
RefSeq Acc Id: ENSMUST00000177654   ⟹   ENSMUSP00000136045
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4149,733,627 - 149,758,651 (-)Ensembl
GRCm38.p6 Ensembl4149,649,170 - 149,674,194 (-)Ensembl
RefSeq Acc Id: NM_001029837   ⟹   NP_001025008
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,786,086 (-)NCBI
GRCm384149,649,168 - 149,701,629 (-)NCBI
MGSCv374149,023,277 - 149,075,738 (-)RGD
Celera4151,915,787 - 151,968,568 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001164049   ⟹   NP_001157521
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,783,165 (-)NCBI
GRCm384149,649,168 - 149,698,708 (-)NCBI
MGSCv374149,023,277 - 149,075,738 (-)RGD
Celera4151,915,787 - 151,968,568 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001164050   ⟹   NP_001157522
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,783,165 (-)NCBI
GRCm384149,649,168 - 149,698,708 (-)NCBI
MGSCv374149,023,277 - 149,075,738 (-)RGD
Celera4151,915,787 - 151,968,568 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001164051   ⟹   NP_001157523
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,760,546 (-)NCBI
GRCm384149,649,168 - 149,676,089 (-)NCBI
MGSCv374149,023,277 - 149,075,738 (-)RGD
Celera4151,915,787 - 151,968,568 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001164052   ⟹   NP_001157524
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,747,773 (-)NCBI
GRCm384149,649,168 - 149,663,316 (-)NCBI
MGSCv374149,023,277 - 149,075,738 (-)RGD
Celera4151,915,787 - 151,968,568 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_008840   ⟹   NP_032866
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,783,165 (-)NCBI
GRCm384149,649,168 - 149,698,708 (-)NCBI
MGSCv374149,023,277 - 149,075,738 (-)RGD
Celera4151,915,787 - 151,968,568 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006538641   ⟹   XP_006538704
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,760,592 (-)NCBI
GRCm384149,649,168 - 149,676,139 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006538642   ⟹   XP_006538705
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,783,146 (-)NCBI
GRCm384149,649,168 - 149,698,690 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006538643   ⟹   XP_006538706
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,786,081 (-)NCBI
GRCm384149,649,168 - 149,701,624 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006538644   ⟹   XP_006538707
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,760,110 (-)NCBI
GRCm384149,649,168 - 149,675,682 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006538645   ⟹   XP_006538708
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,759,638 (-)NCBI
GRCm384149,649,168 - 149,675,181 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006538646   ⟹   XP_006538709
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,787,023 (-)NCBI
GRCm384149,649,168 - 149,702,566 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006538647   ⟹   XP_006538710
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,658 - 149,760,591 (-)NCBI
GRCm384149,649,201 - 149,676,138 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006538648   ⟹   XP_006538711
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,760,592 (-)NCBI
GRCm384149,649,168 - 149,676,140 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006538649   ⟹   XP_006538712
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,658 - 149,760,590 (-)NCBI
GRCm384149,649,201 - 149,676,137 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006538650   ⟹   XP_006538713
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,760,590 (-)NCBI
GRCm384149,649,168 - 149,676,137 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006538651   ⟹   XP_006538714
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,658 - 149,760,590 (-)NCBI
GRCm384149,649,201 - 149,676,137 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006538652   ⟹   XP_006538715
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,658 - 149,760,590 (-)NCBI
GRCm384149,649,201 - 149,676,137 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006538653   ⟹   XP_006538716
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,742,830 (-)NCBI
GRCm384149,649,168 - 149,658,375 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017320037   ⟹   XP_017175526
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,783,160 (-)NCBI
GRCm384149,649,168 - 149,698,691 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017320038   ⟹   XP_017175527
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,760,591 (-)NCBI
GRCm384149,649,201 - 149,676,138 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030253313   ⟹   XP_030109173
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,760,591 (-)NCBI
GRCm384149,649,168 - 149,676,138 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030253314   ⟹   XP_030109174
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,742,829 (-)NCBI
GRCm384149,649,201 - 149,658,375 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030253315   ⟹   XP_030109175
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,658 - 149,742,829 (-)NCBI
GRCm384149,649,201 - 149,658,375 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163829   ⟹   XP_036019722
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,760,592 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163830   ⟹   XP_036019723
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,658 - 149,783,160 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163831   ⟹   XP_036019724
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,658 - 149,742,828 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163832   ⟹   XP_036019725
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394149,733,625 - 149,742,829 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001025008 (Get FASTA)   NCBI Sequence Viewer  
  NP_001157521 (Get FASTA)   NCBI Sequence Viewer  
  NP_001157522 (Get FASTA)   NCBI Sequence Viewer  
  NP_001157523 (Get FASTA)   NCBI Sequence Viewer  
  NP_001157524 (Get FASTA)   NCBI Sequence Viewer  
  NP_032866 (Get FASTA)   NCBI Sequence Viewer  
  XP_006538704 (Get FASTA)   NCBI Sequence Viewer  
  XP_006538705 (Get FASTA)   NCBI Sequence Viewer  
  XP_006538706 (Get FASTA)   NCBI Sequence Viewer  
  XP_006538707 (Get FASTA)   NCBI Sequence Viewer  
  XP_006538708 (Get FASTA)   NCBI Sequence Viewer  
  XP_006538709 (Get FASTA)   NCBI Sequence Viewer  
  XP_006538710 (Get FASTA)   NCBI Sequence Viewer  
  XP_006538711 (Get FASTA)   NCBI Sequence Viewer  
  XP_006538712 (Get FASTA)   NCBI Sequence Viewer  
  XP_006538713 (Get FASTA)   NCBI Sequence Viewer  
  XP_006538714 (Get FASTA)   NCBI Sequence Viewer  
  XP_006538715 (Get FASTA)   NCBI Sequence Viewer  
  XP_006538716 (Get FASTA)   NCBI Sequence Viewer  
  XP_017175526 (Get FASTA)   NCBI Sequence Viewer  
  XP_017175527 (Get FASTA)   NCBI Sequence Viewer  
  XP_030109173 (Get FASTA)   NCBI Sequence Viewer  
  XP_030109174 (Get FASTA)   NCBI Sequence Viewer  
  XP_030109175 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019722 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019723 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019724 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019725 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC25676 (Get FASTA)   NCBI Sequence Viewer  
  AAH35203 (Get FASTA)   NCBI Sequence Viewer  
  AAN05615 (Get FASTA)   NCBI Sequence Viewer  
  BAC30725 (Get FASTA)   NCBI Sequence Viewer  
  BAE29178 (Get FASTA)   NCBI Sequence Viewer  
  BAE29736 (Get FASTA)   NCBI Sequence Viewer  
  BAE30435 (Get FASTA)   NCBI Sequence Viewer  
  BAE31397 (Get FASTA)   NCBI Sequence Viewer  
  BAE42194 (Get FASTA)   NCBI Sequence Viewer  
  BAE42890 (Get FASTA)   NCBI Sequence Viewer  
  CAC21451 (Get FASTA)   NCBI Sequence Viewer  
  CAJ18557 (Get FASTA)   NCBI Sequence Viewer  
  EDL14872 (Get FASTA)   NCBI Sequence Viewer  
  EDL14873 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000036434
  ENSMUSP00000036434.8
  ENSMUSP00000101313
  ENSMUSP00000101313.4
  ENSMUSP00000101314
  ENSMUSP00000101314.2
  ENSMUSP00000101315
  ENSMUSP00000101315.3
  ENSMUSP00000112863
  ENSMUSP00000112863.2
  ENSMUSP00000113844.2
  ENSMUSP00000115542.2
  ENSMUSP00000115716.2
  ENSMUSP00000118988.2
  ENSMUSP00000119858.2
  ENSMUSP00000121843.2
  ENSMUSP00000136045
  ENSMUSP00000136045.2
GenBank Protein O35904 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_001025008   ⟸   NM_001029837
- Peptide Label: isoform b
- UniProtKB: Q3T9Y0 (UniProtKB/TrEMBL),   Q8BS14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_032866   ⟸   NM_008840
- Peptide Label: isoform c
- UniProtKB: Q3UDT3 (UniProtKB/TrEMBL),   Q8BS14 (UniProtKB/TrEMBL),   B0QZL5 (UniProtKB/TrEMBL),   Q546P7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001157521   ⟸   NM_001164049
- Peptide Label: isoform b
- UniProtKB: Q3T9Y0 (UniProtKB/TrEMBL),   Q8BS14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001157522   ⟸   NM_001164050
- Peptide Label: isoform d
- UniProtKB: Q8CI98 (UniProtKB/TrEMBL),   B0QZL5 (UniProtKB/TrEMBL),   Q546P7 (UniProtKB/TrEMBL),   Q8BS14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001157523   ⟸   NM_001164051
- Peptide Label: isoform e
- UniProtKB: Q3TBW3 (UniProtKB/TrEMBL),   Q8BS14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001157524   ⟸   NM_001164052
- Peptide Label: isoform a
- UniProtKB: Q8CJ28 (UniProtKB/Swiss-Prot),   O35904 (UniProtKB/Swiss-Prot),   Q546P7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006538709   ⟸   XM_006538646
- Peptide Label: isoform X1
- UniProtKB: Q8BS14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006538706   ⟸   XM_006538643
- Peptide Label: isoform X1
- UniProtKB: Q8BS14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006538705   ⟸   XM_006538642
- Peptide Label: isoform X1
- UniProtKB: Q8BS14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006538711   ⟸   XM_006538648
- Peptide Label: isoform X3
- UniProtKB: Q8BS14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006538710   ⟸   XM_006538647
- Peptide Label: isoform X2
- UniProtKB: Q8BS14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006538704   ⟸   XM_006538641
- Peptide Label: isoform X1
- UniProtKB: Q8BS14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006538713   ⟸   XM_006538650
- Peptide Label: isoform X6
- UniProtKB: Q8CI98 (UniProtKB/TrEMBL),   B0QZL5 (UniProtKB/TrEMBL),   Q546P7 (UniProtKB/TrEMBL),   Q8BS14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006538712   ⟸   XM_006538649
- Peptide Label: isoform X5
- UniProtKB: Q3T9Y0 (UniProtKB/TrEMBL),   Q8BS14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006538715   ⟸   XM_006538652
- Peptide Label: isoform X9
- UniProtKB: Q8CJ28 (UniProtKB/Swiss-Prot),   O35904 (UniProtKB/Swiss-Prot),   Q546P7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006538714   ⟸   XM_006538651
- Peptide Label: isoform X7
- UniProtKB: Q3UDT3 (UniProtKB/TrEMBL),   B0QZL5 (UniProtKB/TrEMBL),   Q546P7 (UniProtKB/TrEMBL),   Q8BS14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006538707   ⟸   XM_006538644
- Peptide Label: isoform X1
- UniProtKB: Q8BS14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006538708   ⟸   XM_006538645
- Peptide Label: isoform X1
- UniProtKB: Q8BS14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006538716   ⟸   XM_006538653
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_017175526   ⟸   XM_017320037
- Peptide Label: isoform X1
- UniProtKB: Q8BS14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175527   ⟸   XM_017320038
- Peptide Label: isoform X4
- UniProtKB: Q8BS14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030109173   ⟸   XM_030253313
- Peptide Label: isoform X8
- UniProtKB: Q546P7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030109175   ⟸   XM_030253315
- Peptide Label: isoform X14
RefSeq Acc Id: XP_030109174   ⟸   XM_030253314
- Peptide Label: isoform X11
RefSeq Acc Id: ENSMUSP00000101313   ⟸   ENSMUST00000105688
RefSeq Acc Id: ENSMUSP00000101314   ⟸   ENSMUST00000105689
RefSeq Acc Id: ENSMUSP00000101315   ⟸   ENSMUST00000105690
RefSeq Acc Id: ENSMUSP00000112863   ⟸   ENSMUST00000118704
RefSeq Acc Id: ENSMUSP00000136045   ⟸   ENSMUST00000177654
RefSeq Acc Id: ENSMUSP00000119858   ⟸   ENSMUST00000127273
RefSeq Acc Id: ENSMUSP00000121843   ⟸   ENSMUST00000146612
RefSeq Acc Id: ENSMUSP00000115542   ⟸   ENSMUST00000131224
RefSeq Acc Id: ENSMUSP00000118988   ⟸   ENSMUST00000134534
RefSeq Acc Id: ENSMUSP00000115716   ⟸   ENSMUST00000156309
RefSeq Acc Id: ENSMUSP00000113844   ⟸   ENSMUST00000122059
RefSeq Acc Id: ENSMUSP00000036434   ⟸   ENSMUST00000038859
RefSeq Acc Id: XP_036019722   ⟸   XM_036163829
- Peptide Label: isoform X1
- UniProtKB: Q8BS14 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036019725   ⟸   XM_036163832
- Peptide Label: isoform X13
RefSeq Acc Id: XP_036019723   ⟸   XM_036163830
- Peptide Label: isoform X7
- UniProtKB: Q3UDT3 (UniProtKB/TrEMBL),   B0QZL5 (UniProtKB/TrEMBL),   Q546P7 (UniProtKB/TrEMBL),   Q8BS14 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036019724   ⟸   XM_036163831
- Peptide Label: isoform X12
Protein Domains
C2 PI3K-type   PI3K-ABD   PI3K-RBD   PI3K/PI4K catalytic   PIK helical

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O35904-F1-model_v2 AlphaFold O35904 1-1043 view protein structure

Promoters
RGD ID:6848796
Promoter ID:MM_TRO:7212
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Lung,   Spleen
Transcripts:MTR017852.4.2857.10
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364149,021,726 - 149,022,972 (-)MPROMDB
RGD ID:6847834
Promoter ID:MM_ACW:36658
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:PIK3CD.OSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364149,026,121 - 149,026,621 (-)MPROMDB
RGD ID:6847835
Promoter ID:MM_ACW:36659
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_4Hour
Transcripts:PIK3CD.NSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364149,029,091 - 149,029,591 (-)MPROMDB
RGD ID:6847833
Promoter ID:MM_ACW:36660
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour
Transcripts:PIK3CD.MSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364149,032,776 - 149,033,276 (-)MPROMDB
RGD ID:6849158
Promoter ID:MM_XEF:5248
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   Lung,   Spleen
Transcripts:NM_201199
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364149,033,844 - 149,034,344 (-)MPROMDB
RGD ID:6835852
Promoter ID:MM_KWN:40893
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:UC008VWQ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364149,037,426 - 149,038,267 (-)MPROMDB
RGD ID:6835849
Promoter ID:MM_KWN:40894
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Lung,   MEF_B6
Transcripts:OTTMUST00000023880,   OTTMUST00000023881,   OTTMUST00000023884,   UC008VWR.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364149,049,749 - 149,050,249 (-)MPROMDB
RGD ID:6835851
Promoter ID:MM_KWN:40895
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Kidney,   Liver,   Lung,   Spleen
Transcripts:ENSMUST00000038859,   ENSMUST00000105690,   NM_008840_PIK3CD,   OTTMUST00000023885,   OTTMUST00000023886,   UC008VWT.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364149,072,384 - 149,072,884 (-)MPROMDB
RGD ID:6835848
Promoter ID:MM_KWN:40896
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour
Transcripts:ENSMUST00000122059,   OTTMUST00000023882,   UC008VWV.1,   UC008VWW.1,   UC008VWX.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364149,075,421 - 149,075,921 (-)MPROMDB
RGD ID:6835850
Promoter ID:MM_KWN:40897
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:OTTMUST00000023887
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364149,076,694 - 149,077,194 (-)MPROMDB
RGD ID:6885576
Promoter ID:EPDNEW_M6239
Type:initiation region
Name:Pik3cd_3
Description:Mus musculus phosphatidylinositol-4,5-bisphosphate 3-kinase catalyticsubunit delta , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6240  EPDNEW_M6241  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384149,676,089 - 149,676,149EPDNEW
RGD ID:6885578
Promoter ID:EPDNEW_M6240
Type:initiation region
Name:Pik3cd_1
Description:Mus musculus phosphatidylinositol-4,5-bisphosphate 3-kinase catalyticsubunit delta , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6239  EPDNEW_M6241  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384149,698,606 - 149,698,666EPDNEW
RGD ID:6885580
Promoter ID:EPDNEW_M6241
Type:multiple initiation site
Name:Pik3cd_2
Description:Mus musculus phosphatidylinositol-4,5-bisphosphate 3-kinase catalyticsubunit delta , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6239  EPDNEW_M6240  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384149,701,590 - 149,701,650EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1098211 AgrOrtholog
Ensembl Genes ENSMUSG00000039936 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000038859 ENTREZGENE
  ENSMUST00000038859.14 UniProtKB/TrEMBL
  ENSMUST00000105688 ENTREZGENE
  ENSMUST00000105688.10 UniProtKB/TrEMBL
  ENSMUST00000105689 ENTREZGENE
  ENSMUST00000105689.8 UniProtKB/Swiss-Prot
  ENSMUST00000105690 ENTREZGENE
  ENSMUST00000105690.9 UniProtKB/TrEMBL
  ENSMUST00000118704 ENTREZGENE
  ENSMUST00000118704.8 UniProtKB/TrEMBL
  ENSMUST00000122059.8 UniProtKB/TrEMBL
  ENSMUST00000127273.8 UniProtKB/TrEMBL
  ENSMUST00000131224.8 UniProtKB/TrEMBL
  ENSMUST00000134534.8 UniProtKB/TrEMBL
  ENSMUST00000146612.8 UniProtKB/TrEMBL
  ENSMUST00000156309.2 UniProtKB/TrEMBL
  ENSMUST00000177654 ENTREZGENE
  ENSMUST00000177654.8 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1070.11 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.25.40.70 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.40.150 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.10.20.770 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ARM-type_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3/4_kinase_cat_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3/4_kinase_cat_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3/4_kinase_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3K_accessory_dom UniProtKB/TrEMBL
  PI3K_accessory_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3K_adapt-bd_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3K_C2_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3K_Ras-bd_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3Kdelta_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI_Kinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PInositide-3_kin_accessory_dom UniProtKB/Swiss-Prot
  Ubiquitin-like_domsf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:18707 UniProtKB/Swiss-Prot
MGD MGI:1098211 ENTREZGENE
NCBI Gene 18707 ENTREZGENE
PANTHER PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE 3-KINASE CATALYTIC SUBUNIT DELTA ISOFORM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10048 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PI3_PI4_kinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3K_C2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3K_p85B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3K_rbd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3Ka UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pik3cd PhenoGen
PROSITE PI3_4_KINASE_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3_4_KINASE_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3_4_KINASE_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3K_ABD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3K_C2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3K_RBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PIK_HELICAL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART PI3K_C2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3K_p85B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3K_rbd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3Ka UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PI3Kc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF49562 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF54236 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B0QZL5 ENTREZGENE, UniProtKB/TrEMBL
  B1AS24_MOUSE UniProtKB/TrEMBL
  B1AS25_MOUSE UniProtKB/TrEMBL
  B1AS26_MOUSE UniProtKB/TrEMBL
  B1AS27_MOUSE UniProtKB/TrEMBL
  B1AS28_MOUSE UniProtKB/TrEMBL
  O35904 ENTREZGENE, UniProtKB/Swiss-Prot
  Q3T9Y0 ENTREZGENE, UniProtKB/TrEMBL
  Q3TBW3 ENTREZGENE, UniProtKB/TrEMBL
  Q3U7H2_MOUSE UniProtKB/TrEMBL
  Q3UC78_MOUSE UniProtKB/TrEMBL
  Q3UDT3 ENTREZGENE, UniProtKB/TrEMBL
  Q546P7 ENTREZGENE, UniProtKB/TrEMBL
  Q8BS14 ENTREZGENE, UniProtKB/TrEMBL
  Q8CI98 ENTREZGENE, UniProtKB/TrEMBL
  Q8CJ28 ENTREZGENE
UniProt Secondary Q8CJ28 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-05-09 Pik3cd  phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta    phosphatidylinositol 3-kinase catalytic delta polypeptide  Symbol and/or name change 5135510 APPROVED
2016-04-05 Pik3cd  phosphatidylinositol 3-kinase catalytic delta polypeptide  2610208K16Rik  RIKEN cDNA 2610208K16 gene  Data merged from RGD:1612717 737654 PROVISIONAL