Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Clcnka (chloride channel, voltage-sensitive Ka) Mus musculus
Analyze
Symbol: Clcnka
Name: chloride channel, voltage-sensitive Ka
Description: This gene is a member of the CLC family of voltage-gated chloride channels. The gene is located adjacent to a highly similar chloride channel gene on chromosome 4. This gene is syntenic with human CLCNKB (geneID:1188). Multiple alternatively spliced variants, encoding the same protein, have been found for this gene. [provided by RefSeq, Sep 2009]
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: C75963; chloride channel K1; chloride channel Ka; chloride channel protein ClC-Ka; CLC-K1; Clcnk1; putative basolateral cTAL chloride channel ClC-Ka
Orthologs:
Homo sapiens (human) : CLCNKA (chloride voltage-gated channel Ka)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Clcnka (chloride voltage-gated channel Ka)  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : CLCNKA (chloride voltage-gated channel Ka)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clcnka (chloride voltage-gated channel Ka)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm384141,384,611 - 141,398,706 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv374140,940,526 - 140,954,621 (-)NCBIGRCm37mm9NCBIm37
MGSCv364140,656,686 - 140,670,775 (-)NCBImm8
MGSCv364139,138,024 - 139,141,158 (-)NCBImm8
Celera4143,203,480 - 143,215,208 (-)NCBICelera
Cytogenetic Map4 D3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
Nomenclature History
 
More on Clcnka
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 68652
Created: 2001-07-11
Species: Mus musculus
Last Modified: 2019-09-12
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.