Stpg1 (sperm tail PG rich repeat containing 1) - Rat Genome Database

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Gene: Stpg1 (sperm tail PG rich repeat containing 1) Mus musculus
Analyze
Symbol: Stpg1
Name: sperm tail PG rich repeat containing 1
RGD ID: 1617448
MGI Page MGI
Description: Predicted to be involved in positive regulation of apoptotic process and positive regulation of mitochondrial membrane permeability involved in apoptotic process. Predicted to be located in mitochondrion and nucleus. Orthologous to human STPG1 (sperm tail PG-rich repeat containing 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4930403G18Rik; 4930555I21Rik; hypothetical protein LOC78806; Mapo2; O(6)-methylguanine-induced apoptosis 2; O6-methylguanine-induced apoptosis 2; RP23-321M9.1; sperm-tail PG-rich repeat-containing protein 1; UPF0490 protein C1orf201 homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394135,221,971 - 135,265,015 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4135,222,101 - 135,265,114 (+)EnsemblGRCm39 Ensembl
GRCm384135,494,670 - 135,537,803 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4135,494,790 - 135,537,803 (+)EnsemblGRCm38mm10GRCm38
MGSCv374135,051,902 - 135,093,718 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364134,768,063 - 134,809,881 (+)NCBIMGSCv36mm8
Celera4133,689,856 - 133,731,700 (+)NCBICelera
Cytogenetic Map4D3NCBI
cM Map467.7NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
mitochondrion  (IEA)
nucleus  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15741512   PMID:16141072   PMID:16141073   PMID:18799693   PMID:21267068  
PMID:21873635   PMID:23028632  


Genomics

Comparative Map Data
Stpg1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394135,221,971 - 135,265,015 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4135,222,101 - 135,265,114 (+)EnsemblGRCm39 Ensembl
GRCm384135,494,670 - 135,537,803 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4135,494,790 - 135,537,803 (+)EnsemblGRCm38mm10GRCm38
MGSCv374135,051,902 - 135,093,718 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364134,768,063 - 134,809,881 (+)NCBIMGSCv36mm8
Celera4133,689,856 - 133,731,700 (+)NCBICelera
Cytogenetic Map4D3NCBI
cM Map467.7NCBI
STPG1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38124,356,999 - 24,415,044 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl124,356,999 - 24,416,934 (-)EnsemblGRCh38hg38GRCh38
GRCh37124,683,489 - 24,741,534 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36124,556,076 - 24,600,536 (-)NCBINCBI36Build 36hg18NCBI36
Celera123,010,632 - 23,055,104 (-)NCBICelera
Cytogenetic Map1p36.11NCBI
HuRef122,936,177 - 22,994,290 (-)NCBIHuRef
CHM1_1124,796,156 - 24,854,251 (-)NCBICHM1_1
T2T-CHM13v2.0124,195,358 - 24,254,108 (-)NCBIT2T-CHM13v2.0
Stpg1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85153,000,663 - 153,053,391 (+)NCBIGRCr8
mRatBN7.25147,717,084 - 147,769,792 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5147,726,646 - 147,769,788 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5150,428,390 - 150,471,970 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05152,199,670 - 152,243,232 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05152,184,681 - 152,228,259 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05153,834,263 - 153,888,510 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5153,835,821 - 153,888,506 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05157,600,754 - 157,654,877 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45154,264,790 - 154,308,318 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera5146,137,198 - 146,180,230 (+)NCBICelera
Cytogenetic Map5q36NCBI
Stpg1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554524,163,293 - 4,209,514 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554524,163,343 - 4,210,698 (-)NCBIChiLan1.0ChiLan1.0
STPG1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21202,514,585 - 202,572,956 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11201,618,015 - 201,676,436 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0123,559,787 - 23,616,967 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1124,539,792 - 24,596,633 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl124,539,792 - 24,596,633 (-)Ensemblpanpan1.1panPan2
STPG1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1275,236,800 - 75,286,872 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl275,237,141 - 75,287,953 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha271,809,494 - 71,859,326 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0275,798,891 - 75,847,450 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl275,798,659 - 75,848,531 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1272,621,498 - 72,670,026 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0273,627,688 - 73,677,576 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0274,632,552 - 74,682,183 (+)NCBIUU_Cfam_GSD_1.0
Stpg1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505843,533,324 - 43,573,825 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364749,358,116 - 9,398,271 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364749,358,114 - 9,398,379 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
STPG1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl682,052,686 - 82,109,731 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1682,052,682 - 82,111,468 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2675,758,067 - 75,799,025 (-)NCBISscrofa10.2Sscrofa10.2susScr3
STPG1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120108,281,452 - 108,337,522 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20108,303,904 - 108,338,167 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660338,021,827 - 8,077,925 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Stpg1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247648,789,302 - 8,827,262 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247648,787,260 - 8,827,279 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:895
Count of miRNA genes:473
Interacting mature miRNAs:565
Transcripts:ENSMUST00000063707, ENSMUST00000123221, ENSMUST00000153891
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301267Bcmd2_mB cell maturation defect 2 (mouse)Not determined4133154678150789451Mouse
4142139Adip12_madiposity 12 (mouse)Not determined4124621281156860686Mouse
10047132Albq19_malbuminuria QTL 19 (mouse)Not determined4112824389146824389Mouse
1301525Lmb1_mlupus in MRL and B6 F2 cross (mouse)Not determined4124264957150676858Mouse
14746982Manh56_mmandible shape 56 (mouse)4117815917151815917Mouse
4141623W6q13_mweight 6 weeks QTL 13 (mouse)Not determined88982069140468203Mouse
12910797Pwgrq4_mpre-weaning growth rate QTL 4 (mouse)4105835310141433838Mouse
25314312Syncl2_msynaptonemal complex length 2 (mouse)465718237146584457Mouse
12910794Pwbwq8_mpost-weaning body weight QTL 8 (mouse)4105835310141433838Mouse
1300743Skull6_mskull morphology 6 (mouse)Not determined4111009051145009280Mouse
1301382Arvm2_mautoimmune renal vasculitis 2 (mouse)Not determined4107791564141791756Mouse
1302149Tlsr2_mthymic lymphoma suppressor region 2 (mouse)Not determined4124264957142230960Mouse
12910813Pwbwq4_mpre-weaning body weight QTL 4 (mouse)4105835310141433838Mouse
1300874Gasa2_mgastritis type A susceptibility locus 2 (mouse)Not determined4133010494156860686Mouse
4141093W3q17_mweight 3 weeks QTL 17 (mouse)Not determined88982069140468203Mouse
27226757Femd1_mfemur midshaft diameter 1, 5 week (mouse)4123993793144326570Mouse
12910808Pwbwq9_mpost-weaning body weight QTL 9 (mouse)4105835310141433838Mouse
1300621Tpnr1_mthermal pain response 1 (mouse)Not determined4125230872156860686Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
4142493Femwf13_mfemur work to failure 13 (mouse)Not determined116154678150154782Mouse
1301815Sles2_msystemic lupus erythmatosus suppressor 2 (mouse)Not determined494957579150676858Mouse
1300663Start2_mstartle response 2 (mouse)Not determined4107264957141265153Mouse
1300917Gasa1_mgastritis type A susceptibility locus 1 (mouse)Not determined4124055093142438020Mouse
1300537Ap3q_malcohol preference 3 QTL (mouse)Not determined4134654451156860686Mouse
1301823Bmd7_mbone mineral density 7 (mouse)Not determined488982069151654550Mouse
10412210Cypr6_mcytokine production 6 (mouse)Not determined4120617848154617995Mouse
1302078Sluc21_msusceptibility to lung cancer 21 (mouse)Not determined4117401141151401275Mouse
10045620Heal22_mwound healing/regeneration 22 (mouse)Not determined4125230872156860686Mouse
4142481Gct1_mgranulosa cell tumorigenesis 1 (mouse)Not determined4127784226156860686Mouse
1301793Tlsr3_mthymic lymphoma suppressor region 3 (mouse)Not determined4129465811136864536Mouse
4141065Shali2_msurvival time to hyperoxic acute lung injury 2 (mouse)Not determined124055093141572792Mouse
13503348Bntq18_mbone traits QTL 18 (mouse)4120617848154617995Mouse
13208562Wght7_mweight 7 (mouse)490888237148084457Mouse
4142082Psds2_mpsoriasis-like skin disease severity 2 (mouse)Not determined4133154678137617995Mouse
1300781Lith8_mlithogenic gene 8 (mouse)Not determined4107264957141265153Mouse
39128212Lwq21_mliver weight QTL 21 (mouse)488982069140468203Mouse
4142077Ignpq2_mIgA nephropathy QTL 2 (mouse)Not determined4133676733156860686Mouse
4141180Ssic1_msusceptibility to small intestinal cancer 1 (mouse)Not determined120674005154674151Mouse
1301584Lrdg2_mlight induced retinal degeneration 2 (mouse)Not determined4129465811151654550Mouse
1302102Bis1_mbeta-carboline-induced seizures 1 (mouse)Not determined4119864433153864536Mouse
10043996Gct5_mgranulosa cell tumorigenesis 5 (mouse)Not determined4127784226156860686Mouse
26884445Sklq7_mskull length QTL 7, 10 week (mouse)468018237150884457Mouse
10043985Stheal12_msoft tissue heal 12 (mouse)Not determined4121342649155342753Mouse
1301982Pltiq1_mphospholipid transfer protein inducibility QTL 1 (mouse)Not determined4124621281156860686Mouse
26884437Sklq13_mskull length QTL 13, 16 week (mouse)457700000155684457Mouse
1300803Sluc6_msusceptibility to lung cancer 6 (mouse)Not determined4120674005154674151Mouse
4141549W10q10_mweight 10 weeks QTL 10 (mouse)Not determined88982069140468203Mouse
4142061Chlq16_mcirculating hormone level QTL 16 (mouse)Not determined4121342649155342753Mouse
1357895Ctrcts_mcataract severity (mouse)Not determined445709925138342753Mouse
1300933Cdcs9_mcytokine deficiency colitis susceptibility 9 (mouse)Not determined4125230872156860686Mouse
1300809Ccrs2_mcorpus callosum hemisphere surface size 2 (mouse)Not determined4107264957141265153Mouse
4141154Nba1_mNew Zealand Black autoimmunity 1 (mouse)Not determined131650724140879275Mouse
1301964Bw8q2_mbody weight at 8 weeks QTL 2 (mouse)Not determined4119864433153864536Mouse
1301452Elsgp1_melevated serum gp70 1 (mouse)Not determined4121342649155342753Mouse
10755520Rbc1_mred blood cell count 1 (mouse)4108477692142477692Mouse
10755521Hct1_mhematocrit 1 (mouse)4108477692142477692Mouse
10755522Hgb1_mhemoglobin 1 (mouse)4108477692142477692Mouse
1301108Scon2_msucrose consumption 2 (mouse)Not determined4134654451156860686Mouse
1300858Tafat_mtally ho associated mesenteric fat pad weight (mouse)Not determined4124621281156860686Mouse
10755531Lymph3_mlymphocyte differential 3 (mouse)4124553483156860686Mouse
15039382Ltgq7_mliver triglyceride QTL 7 (mouse)4105705794139705794Mouse
11533916Mts1_mmammary tumor susceptibility 1 (mouse)4125289325156860686Mouse
15039377Bw45_mbody weight QTL 45 (mouse)4105705794139705794Mouse
1300839Dyscalc2_mdystrophic cardiac calcinosis 2 (mouse)Not determined4111009051145009280Mouse
4141001Tgq17_mtriglyceride QTL 17 (mouse)Not determined112523489146523489Mouse
15039378Adip30_madiposity 30 (mouse)4105705794139705794Mouse
1357800Tgq3_mtriglyceride QTL 3 (mouse)Not determined4107055093141055180Mouse
15039385Mvlq3_mmacrovesicular liver lesion QTL 3 (mouse)4112182386146182386Mouse


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001419281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001419282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001419286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001419287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_030189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006539285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006539286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006539287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006539288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK015061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK035517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL670720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC145657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000063707   ⟹   ENSMUSP00000067647
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4135,223,298 - 135,265,114 (+)Ensembl
GRCm38.p6 Ensembl4135,495,987 - 135,537,803 (+)Ensembl
Ensembl Acc Id: ENSMUST00000123221
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4135,223,288 - 135,261,301 (+)Ensembl
GRCm38.p6 Ensembl4135,495,977 - 135,533,990 (+)Ensembl
Ensembl Acc Id: ENSMUST00000153891
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4135,222,101 - 135,246,660 (+)Ensembl
GRCm38.p6 Ensembl4135,494,790 - 135,519,349 (+)Ensembl
RefSeq Acc Id: NM_001419281   ⟹   NP_001406210
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,221,971 - 135,265,015 (+)NCBI
RefSeq Acc Id: NM_001419282   ⟹   NP_001406211
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,223,309 - 135,265,015 (+)NCBI
RefSeq Acc Id: NM_001419286   ⟹   NP_001406215
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,221,971 - 135,265,015 (+)NCBI
RefSeq Acc Id: NM_001419287   ⟹   NP_001406216
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,221,971 - 135,265,015 (+)NCBI
RefSeq Acc Id: NM_030189   ⟹   NP_084465
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,223,309 - 135,265,015 (+)NCBI
GRCm384135,495,987 - 135,537,803 (+)NCBI
MGSCv374135,051,902 - 135,093,718 (+)RGD
Celera4133,689,856 - 133,731,700 (+)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006539285   ⟹   XP_006539348
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,222,434 - 135,265,010 (+)NCBI
GRCm384135,495,123 - 135,537,699 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006539286   ⟹   XP_006539349
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,222,434 - 135,265,010 (+)NCBI
GRCm384135,495,122 - 135,537,699 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006539287   ⟹   XP_006539350
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,223,403 - 135,265,010 (+)NCBI
GRCm384135,496,091 - 135,537,699 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006539288   ⟹   XP_006539351
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,233,807 - 135,265,010 (+)NCBI
GRCm384135,506,496 - 135,537,699 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011250356   ⟹   XP_011248658
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,223,438 - 135,265,010 (+)NCBI
GRCm384135,496,126 - 135,537,699 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320457   ⟹   XP_017175946
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,222,433 - 135,265,010 (+)NCBI
GRCm384135,495,121 - 135,537,699 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320458   ⟹   XP_017175947
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,222,295 - 135,265,010 (+)NCBI
GRCm384135,494,980 - 135,537,699 (+)NCBI
Sequence:
RefSeq Acc Id: NP_084465   ⟸   NM_030189
- Peptide Label: isoform a
- UniProtKB: Q9D2F5 (UniProtKB/Swiss-Prot),   A6H5V9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006539349   ⟸   XM_006539286
- Peptide Label: isoform X1
- UniProtKB: Q9D2F5 (UniProtKB/Swiss-Prot),   A6H5V9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006539348   ⟸   XM_006539285
- Peptide Label: isoform X1
- UniProtKB: Q9D2F5 (UniProtKB/Swiss-Prot),   A6H5V9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006539350   ⟸   XM_006539287
- Peptide Label: isoform X1
- UniProtKB: Q9D2F5 (UniProtKB/Swiss-Prot),   A6H5V9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006539351   ⟸   XM_006539288
- Peptide Label: isoform X2
- UniProtKB: A6H5V9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011248658   ⟸   XM_011250356
- Peptide Label: isoform X1
- UniProtKB: Q9D2F5 (UniProtKB/Swiss-Prot),   A6H5V9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175947   ⟸   XM_017320458
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_017175946   ⟸   XM_017320457
- Peptide Label: isoform X4
- UniProtKB: A6H5V9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000067647   ⟸   ENSMUST00000063707
RefSeq Acc Id: NP_001406210   ⟸   NM_001419281
- Peptide Label: isoform a
- UniProtKB: Q9D2F5 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001406215   ⟸   NM_001419286
- Peptide Label: isoform c
RefSeq Acc Id: NP_001406216   ⟸   NM_001419287
- Peptide Label: isoform c
RefSeq Acc Id: NP_001406211   ⟸   NM_001419282
- Peptide Label: isoform b

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9D2F5-F1-model_v2 AlphaFold Q9D2F5 1-341 view protein structure

Promoters
RGD ID:6836216
Promoter ID:MM_KWN:40150
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:ENSMUST00000063707,   OTTMUST00000022477
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364135,051,041 - 135,051,541 (+)MPROMDB
RGD ID:6847773
Promoter ID:MM_ACW:36052
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:4930555I21RIK.ESEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364135,069,976 - 135,070,476 (+)MPROMDB
RGD ID:6885068
Promoter ID:EPDNEW_M5985
Type:initiation region
Name:Stpg1_1
Description:Mus musculus sperm tail PG rich repeat containing 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384135,495,998 - 135,496,058EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1926056 AgrOrtholog
Ensembl Genes ENSMUSG00000028801 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000063707 ENTREZGENE
  ENSMUST00000063707.3 UniProtKB/Swiss-Prot
InterPro SHIPPO-rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:78806 UniProtKB/Swiss-Prot
MGD MGI:1926056 ENTREZGENE
NCBI Gene 78806 ENTREZGENE
PANTHER PROTEIN STPG4 UniProtKB/Swiss-Prot
  PROTEIN STPG4 UniProtKB/Swiss-Prot
  PROTEIN STPG4 UniProtKB/TrEMBL
  PROTEIN STPG4 UniProtKB/TrEMBL
Pfam SHIPPO-rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Stpg1 PhenoGen
UniProt A6H5V9 ENTREZGENE, UniProtKB/TrEMBL
  Q9D2F5 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-09-19 Stpg1  sperm tail PG rich repeat containing 1  4930555I21Rik  RIKEN cDNA 4930555I21 gene  Symbol and/or name change 5135510 APPROVED