STPG1 (sperm tail PG-rich repeat containing 1)

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Gene: STPG1 (sperm tail PG-rich repeat containing 1) Chlorocebus sabaeus

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Symbol:

STPG1

Name:

sperm tail PG-rich repeat containing 1

RGD ID:

18506098

Description:

ENCODES a protein that exhibits chromatin binding (inferred); histone binding (inferred); INVOLVED IN epigenetic programing of male pronucleus (inferred); positive regulation of apoptotic process (inferred); positive regulation of mitochondrial membrane permeability involved in apoptotic process (inferred); ASSOCIATED WITH 3-hydroxy-3-methylglutaryl-CoA lyase deficiency (ortholog); Van der Woude Syndrome 2 (ortholog); FOUND IN cytoplasm (inferred); female pronucleus (inferred); germinal vesicle (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

O(6)-methylguanine-induced apoptosis 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	108,281,452 - 108,337,522 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	108,303,904 - 108,338,167 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	8,021,827 - 8,077,925 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

3-hydroxy-3-methylglutaryl-CoA lyase deficiency (ISO)

Van der Woude Syndrome 2 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

epigenetic programing of male pronucleus (IEA)

positive regulation of apoptotic process (IEA)

positive regulation of mitochondrial membrane permeability involved in apoptotic process (IEA)

Cellular Component

cytoplasm (IEA)

female pronucleus (IEA)

germinal vesicle (IEA)

male pronucleus (IEA)

mitochondrion (IEA)

nucleus (IEA)

Molecular Function

chromatin binding (IEA)

histone binding (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

STPG1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	108,281,452 - 108,337,522 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	108,303,904 - 108,338,167 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	8,021,827 - 8,077,925 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

STPG1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	24,356,999 - 24,415,044 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	24,356,999 - 24,416,934 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	24,683,489 - 24,741,534 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	24,556,076 - 24,600,536 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	23,010,632 - 23,055,104 (-)	NCBI		Celera
Cytogenetic Map	1	p36.11	NCBI
HuRef	1	22,936,177 - 22,994,290 (-)	NCBI		HuRef
CHM1_1	1	24,796,156 - 24,854,251 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	24,195,358 - 24,254,108 (-)	NCBI		T2T-CHM13v2.0

Stpg1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	135,221,971 - 135,265,015 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	135,222,101 - 135,265,114 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	135,494,670 - 135,537,803 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	135,494,790 - 135,537,803 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	135,051,902 - 135,093,718 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	134,768,063 - 134,809,881 (+)	NCBI		MGSCv36	mm8
Celera	4	133,689,856 - 133,731,700 (+)	NCBI		Celera
Cytogenetic Map	4	D3	NCBI
cM Map	4	67.7	NCBI

Stpg1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	153,000,663 - 153,053,391 (+)	NCBI		GRCr8
mRatBN7.2	5	147,717,084 - 147,769,792 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	147,726,646 - 147,769,788 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	150,428,390 - 150,471,970 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	152,199,670 - 152,243,232 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	152,184,681 - 152,228,259 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	153,834,263 - 153,888,510 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	153,835,821 - 153,888,506 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	157,600,754 - 157,654,877 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	154,264,790 - 154,308,318 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	5	146,137,198 - 146,180,230 (+)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

Stpg1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955452	4,163,293 - 4,209,514 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955452	4,163,343 - 4,210,698 (-)	NCBI	ChiLan1.0	ChiLan1.0

STPG1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	202,514,585 - 202,572,956 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	201,618,015 - 201,676,436 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	23,559,787 - 23,616,967 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	24,539,792 - 24,596,633 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	24,539,792 - 24,596,633 (-)	Ensembl	panpan1.1		panPan2

STPG1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	75,236,800 - 75,286,872 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	75,237,141 - 75,287,953 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	71,809,494 - 71,859,326 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	75,798,891 - 75,847,450 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	75,798,659 - 75,848,531 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	72,621,498 - 72,670,026 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	73,627,688 - 73,677,576 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	74,632,552 - 74,682,183 (+)	NCBI		UU_Cfam_GSD_1.0

Stpg1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	43,533,324 - 43,573,825 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	9,358,116 - 9,398,271 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	9,358,114 - 9,398,379 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

STPG1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	82,052,686 - 82,109,731 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	82,052,682 - 82,111,468 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	75,758,067 - 75,799,025 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Stpg1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624764	8,789,302 - 8,827,262 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624764	8,787,260 - 8,827,279 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	19	35	35	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007980018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007980019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007980020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007980021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007980022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007980023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000017593 ⟹ ENSCSAP00000017068

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	20	108,303,904 - 108,338,167 (+)	Ensembl

RefSeq Acc Id:

XM_007980018 ⟹ XP_007978209

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	20	108,281,467 - 108,337,504 (+)	NCBI
Vero_WHO_p1.0	NW_023666033	8,021,827 - 8,077,915 (-)	NCBI

Sequence:

show sequence

GCGAATGTTAGGCCTGTGGTTGCCATAGCGACCGGGAGGTTGGGCTGGCCAGATTCAGCCGCCG
GGACCCGACCAGATTCTAGGCCCATGCCATCCTGTCATGAACAGTTATACAAGCAAGTGGACCA
GTGAGGCACATTTGGGCAGTGCTCTGTTCACATCTGGCCTGCACCTGCTCTCATCCTGCCTTCA
CAGGTGCTTAGGAGAACACGCAGTAGAGCTTTTCATCAAACAAATGGAACACGTCATAGTATTT
TGCTAACATGGACAACTCTGCACAGAAAAATGAACGCACTGGCAAACATCCCAGACGTGCCATT
GAAGTACAGAAAGGTTTTACTGCTGCATATCCAACACAATCCTCCATTCCTTTTAAATCTCAAG
CTTCAGTAATACAAGAATCAGAAAAAAAAGGATTCAGTAGTCAAGCCAAGAGATTTTCTCAAAA
GAAGAATGATATCCCAGGTCCTGGATTCTACAATGTCATTCATCAGTCACCAGTGTCCAACAGT
GTCTCATTGTCCAAGAAAGGAACATGCATGTTTCCCTCAATGCGCGCCCGATTGGACACCATCA
TTTCTAAATACCCTGCAGCGAATGCATACACTATCCCATCGGAGTTTATTTCCAAGAGAGACTT
TAGTAATTCATGTTCCAGCATGTTCCAGTTGCCAAGCTTTATGAAAGTTCTCAAATTTGAAACT
CCTGCACCAAACTATTACAATGCCTCTGTCTCTTGCTGCAAGCAGAGAAACAACGTCTGTGCCC
GAGCCGGGTTTATGTCAAAAACCCAAAGAGGATCTTTTGTTTTTGCTGAAAAAGGACCTCCCCC
AGGGCATTATGATATCAACGAATCCCTTGTGAAGCAGTCGCCAAACACATTAATGTCTTGTTTT
AAATCAAAAACCAACCGTGGATTAAAACTGACGTCAACAGGCCCGGGACCCGGTTATTACAACC
CTGGCGATTGCACAAAAGTTCCAAAAAAGACTCTTTTCCCGAAAAACCCCATCCTGAACTTCTC
TGCTCAGCCTTCGCCTCTGCCCCCGAAGCCGCCTCTCCCAGGTCCTGGTCAGTATGAGATTGTG
GACTACTTAGGTCCCCGCAAGCATTTCATCTCGAGCGCGTCATTCGTGTCTAATACCAGCCGGT
GGACAGCGGTGCCCGCTCAGCCAGGCCTGCCTGGCCCAGCCACGTACAAGCCAGAGCTCCCGGG
AAAGCAGTCCTTCCTCTACAACGAGGACAAGAAATGGATCCCGGTGCTGTAGGGATGTGACACA
AGGTCGAGGAGAACCCCGGCCATCAGCCCGTCCCGCCCAGCTTCCCCAGGACATTCCTCAGGAG
GAGACTGACCATGTGTGTGGCAGCTGACAACTTGGGGGCCGGCTCTACCACTCTGGCCTGGCTC
TACCACTCTGGCCTGGCGTGCTAGCCGGACTGCTGCCATTGCCTTTGTCTTGAGCTGGAGACAT
TGCTCCCTGGAGACTGCACCCCAGCCCCACGGACTCCAGTGGGTTCCTGAGCAGAAGGGAGGAG
TGGACAGAGCCCTCTGGCTGCTTCCCCACGCACCCATCCAGGCTGGCTTCCGGCACGACTCCCT
GCCACAGACTGAAGGGACTCCTGAGGTGCAGACTTCAAGGAGGAGCAGTCCACCCTGAAGGTGG
CCAAGCCTGGAAGCCCCACCCTTCCCTGTGTCATTCCTTCATTCATTTACACATTCATGCATTC
CCTCACTCCTGCCTTTCTCATTTGTTCCTTTCTGGCCTCACTCACTCACTCACTCACGGTATGT
CTACTGGGCAAAAGGTACCTGCAGGCAGGTGATGCTTTTTCCACCAGTCCACAGCTTTCTTTCT
AAAGTGACCACCTGTTTGGAAAGGCCTCTCTTTACTCCTTTTAGACCTTTTTCTTCTTTGGAGT
GGGAGATCATCTTGGAATGGCGGTGGCCGGGCCCAGGGGCTGCGCTTTTCCCTGACTTCCTCTG
CCGGCGGGACTGAATTTTCTCAAGGCTTACAGGCCCCTCCATGGAGTCCACATAGCCTGTCTAG
GCCTGATAGCCTTTGTCTCTTTATGTGGAGGGAAAAAGAAAGGTGCCCTGGTGGTTTTGGTGGA
GGCTGCACAGGTGCACGGTGGGTGGGGAGCTGCCAGGTTCCTTCCCTCGTCTCCCAGCAGACTT
TGACTGACACTGTAAGTCTCTCTGTGCATTCACCCTGCCAGATACTGAGAGGTTACAAAGGCTC
CAGGGCCTGTACGTCTGTGGCCTCTCCAGAAAAGTGGTTCTCCGCCTTGACTGCACACTGTAAC
CACCTGGGGACTTTAAAAAGTACCGAGGCCTGGGGCCCACCCACAAATGCTGATTTAACCCCTC
CAGGGTGGGGTCTGGGCAGTGGGGAGGCAGGAGGGGGTAAAAGCCACCCAGGTGATTCCAGTGA
CGGGTGAAGGTTGAGCAGCGACACCTTCCAGCTTCCTGACTGGCTCTGGGAGGGGAGCTGGAAA
GGAGGACAGGAGGTGGGAACTTTATACACACGGAGCACCTACAGCATGGCTGCGGTTCCACACT
CCTCTGTCATTTAACCTCCACGCATCACCTCATTCTGACATCACGGGGGCGTCACAGCCACAGT
GAGGCCTGGCCTGGCAGAGCAACTCTGGGTGCCCCACTGGGTCCCTCCCACAGTGGCAGGCAAG
CCTAATGGGAACCCGAGGCAAAAGGAAACATCAGTAATACGAATCCTGTCTTCAAAACTGTGAT
GTTTTGTTCACCATGCTTTTTTTTTTTTTGCCTTAATTTAAAAAATATTGCATTAAA

hide sequence

RefSeq Acc Id:

XM_007980020 ⟹ XP_007978211

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	20	108,281,452 - 108,337,522 (+)	NCBI
Vero_WHO_p1.0	NW_023666033	8,021,827 - 8,077,925 (-)	NCBI

Sequence:

show sequence

GCGGAAGGTGGACTTGCGAATGTTAGGCCTGTGGTTGCCATAGCGACCGGGAGGTTGGGCTGGC
CAGATTCAGCCGCCGGGACCCGACCAGGTGCTTAGGAGAACACGCAGTAGAGCTTTTCATCAAA
CAAATGGAACACGTCATAGTATTTTGCTAACATGGACAACTCTGCACAGAAAAATGAACGCACT
GGCAAACATCCCAGACGTGCCATTGAAGTACAGAAAGGTTTTACTGCTGCATATCCAACACAAT
CCTCCATTCCTTTTAAATCTCAAGCTTCAGTAATACAAGAATCAGAAAAAAAAGGATTCAGTAG
TCAAGCCAAGAGATTTTCTCAAAAGAAGAATGATATCCCAGGTCCTGGATTCTACAATGTCATT
CATCAGTCACCAGTGTCCAACAGTGTCTCATTGTCCAAGAAAGGAACATGCATGTTTCCCTCAA
TGCGCGCCCGATTGGACACCATCATTTCTAAATACCCTGCAGCGAATGCATACACTATCCCATC
GGAGTTTATTTCCAAGAGAGACTTTAGTAATTCATGTTCCAGCATGTTCCAGTTGCCAAGCTTT
ATGAAAGTTCTCAAATTTGAAACTCCTGCACCAAACTATTACAATGCCTCTGTCTCTTGCTGCA
AGCAGAGAAACAACGTCTGTGCCCGAGCCGGGTTTATGTCAAAAACCCAAAGAGGATCTTTTGT
TTTTGCTGAAAAAGGACCTCCCCCAGGGCATTATGATATCAACGAATCCCTTGTGAAGCAGTCG
CCAAACACATTAATGTCTTGTTTTAAATCAAAAACCAACCGTGGATTAAAACTGACGTCAACAG
GCCCGGGACCCGGTTATTACAACCCTGGCGATTGCACAAAAGTTCCAAAAAAGACTCTTTTCCC
GAAAAACCCCATCCTGAACTTCTCTGCTCAGCCTTCGCCTCTGCCCCCGAAGCCGCCTCTCCCA
GGTCCTGGTCAGTATGAGATTGTGGACTACTTAGGTCCCCGCAAGCATTTCATCTCGAGCGCGT
CATTCGTGTCTAATACCAGCCGGTGGACAGCGGTGCCCGCTCAGCCAGGCCTGCCTGGCCCAGC
CACGTACAAGCCAGAGCTCCCGGGAAAGCAGTCCTTCCTCTACAACGAGGACAAGAAATGGATC
CCGGTGCTGTAGGGATGTGACACAAGGTCGAGGAGAACCCCGGCCATCAGCCCGTCCCGCCCAG
CTTCCCCAGGACATTCCTCAGGAGGAGACTGACCATGTGTGTGGCAGCTGACAACTTGGGGGCC
GGCTCTACCACTCTGGCCTGGCTCTACCACTCTGGCCTGGCGTGCTAGCCGGACTGCTGCCATT
GCCTTTGTCTTGAGCTGGAGACATTGCTCCCTGGAGACTGCACCCCAGCCCCACGGACTCCAGT
GGGTTCCTGAGCAGAAGGGAGGAGTGGACAGAGCCCTCTGGCTGCTTCCCCACGCACCCATCCA
GGCTGGCTTCCGGCACGACTCCCTGCCACAGACTGAAGGGACTCCTGAGGTGCAGACTTCAAGG
AGGAGCAGTCCACCCTGAAGGTGGCCAAGCCTGGAAGCCCCACCCTTCCCTGTGTCATTCCTTC
ATTCATTTACACATTCATGCATTCCCTCACTCCTGCCTTTCTCATTTGTTCCTTTCTGGCCTCA
CTCACTCACTCACTCACGGTATGTCTACTGGGCAAAAGGTACCTGCAGGCAGGTGATGCTTTTT
CCACCAGTCCACAGCTTTCTTTCTAAAGTGACCACCTGTTTGGAAAGGCCTCTCTTTACTCCTT
TTAGACCTTTTTCTTCTTTGGAGTGGGAGATCATCTTGGAATGGCGGTGGCCGGGCCCAGGGGC
TGCGCTTTTCCCTGACTTCCTCTGCCGGCGGGACTGAATTTTCTCAAGGCTTACAGGCCCCTCC
ATGGAGTCCACATAGCCTGTCTAGGCCTGATAGCCTTTGTCTCTTTATGTGGAGGGAAAAAGAA
AGGTGCCCTGGTGGTTTTGGTGGAGGCTGCACAGGTGCACGGTGGGTGGGGAGCTGCCAGGTTC
CTTCCCTCGTCTCCCAGCAGACTTTGACTGACACTGTAAGTCTCTCTGTGCATTCACCCTGCCA
GATACTGAGAGGTTACAAAGGCTCCAGGGCCTGTACGTCTGTGGCCTCTCCAGAAAAGTGGTTC
TCCGCCTTGACTGCACACTGTAACCACCTGGGGACTTTAAAAAGTACCGAGGCCTGGGGCCCAC
CCACAAATGCTGATTTAACCCCTCCAGGGTGGGGTCTGGGCAGTGGGGAGGCAGGAGGGGGTAA
AAGCCACCCAGGTGATTCCAGTGACGGGTGAAGGTTGAGCAGCGACACCTTCCAGCTTCCTGAC
TGGCTCTGGGAGGGGAGCTGGAAAGGAGGACAGGAGGTGGGAACTTTATACACACGGAGCACCT
ACAGCATGGCTGCGGTTCCACACTCCTCTGTCATTTAACCTCCACGCATCACCTCATTCTGACA
TCACGGGGGCGTCACAGCCACAGTGAGGCCTGGCCTGGCAGAGCAACTCTGGGTGCCCCACTGG
GTCCCTCCCACAGTGGCAGGCAAGCCTAATGGGAACCCGAGGCAAAAGGAAACATCAGTAATAC
GAATCCTGTCTTCAAAACTGTGATGTTTTGTTCACCATGCTTTTTTTTTTTTTGCCTTAATTTA
AAAAATATTGCATTAAACTTATTTATCTTGATTAT

hide sequence

RefSeq Acc Id:

XM_007980023 ⟹ XP_007978214

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	20	108,311,613 - 108,337,504 (+)	NCBI
Vero_WHO_p1.0	NW_023666033	8,021,827 - 8,055,400 (-)	NCBI

Sequence:

show sequence

AATGATATCCCAGGTCCTGGATTCTACAATGTCATTCATCAGTCACCAGTGTCCAACAGTGTCT
CATTGTCCAAGAAAGGAACATGCATGTTTCCCTCAATGGGTGGGAAGAGAAACCAGAGGAATCT
TCAGGACTTGATCCTGCCAAACCAATTTTGTCATCACGCGCCCGATTGGACACCATCATTTCTA
AATACCCTGCAGCGAATGCATACACTATCCCATCGGAGTTTATTTCCAAGAGAGACTTTAGTAA
TTCATGTTCCAGCATGTTCCAGTTGCCAAGCTTTATGAAAGTTCTCAAATTTGAAACTCCTGCA
CCAAACTATTACAATGCCTCTGTCTCTTGCTGCAAGCAGAGAAACAACGTCTGTGCCCGAGCCG
GGTTTATGTCAAAAACCCAAAGAGGATCTTTTGTTTTTGCTGAAAAAGGACCTCCCCCAGGGCA
TTATGATATCAACGAATCCCTTGTGAAGCAGTCGCCAAACACATTAATGTCTTGTTTTAAATCA
AAAACCAACCGTGGATTAAAACTGACGTCAACAGGCCCGGGACCCGGTTATTACAACCCTGGCG
ATTGCACAAAAGTTCCAAAAAAGACTCTTTTCCCGAAAAACCCCATCCTGAACTTCTCTGCTCA
GCCTTCGCCTCTGCCCCCGAAGCCGCCTCTCCCAGGTCCTGGTCAGTATGAGATTGTGGACTAC
TTAGGTCCCCGCAAGCATTTCATCTCGAGCGCGTCATTCGTGTCTAATACCAGCCGGTGGACAG
CGGTGCCCGCTCAGCCAGGCCTGCCTGGCCCAGCCACGTACAAGCCAGAGCTCCCGGGAAAGCA
GTCCTTCCTCTACAACGAGGACAAGAAATGGATCCCGGTGCTGTAGGGATGTGACACAAGGTCG
AGGAGAACCCCGGCCATCAGCCCGTCCCGCCCAGCTTCCCCAGGACATTCCTCAGGAGGAGACT
GACCATGTGTGTGGCAGCTGACAACTTGGGGGCCGGCTCTACCACTCTGGCCTGGCTCTACCAC
TCTGGCCTGGCGTGCTAGCCGGACTGCTGCCATTGCCTTTGTCTTGAGCTGGAGACATTGCTCC
CTGGAGACTGCACCCCAGCCCCACGGACTCCAGTGGGTTCCTGAGCAGAAGGGAGGAGTGGACA
GAGCCCTCTGGCTGCTTCCCCACGCACCCATCCAGGCTGGCTTCCGGCACGACTCCCTGCCACA
GACTGAAGGGACTCCTGAGGTGCAGACTTCAAGGAGGAGCAGTCCACCCTGAAGGTGGCCAAGC
CTGGAAGCCCCACCCTTCCCTGTGTCATTCCTTCATTCATTTACACATTCATGCATTCCCTCAC
TCCTGCCTTTCTCATTTGTTCCTTTCTGGCCTCACTCACTCACTCACTCACGGTATGTCTACTG
GGCAAAAGGTACCTGCAGGCAGGTGATGCTTTTTCCACCAGTCCACAGCTTTCTTTCTAAAGTG
ACCACCTGTTTGGAAAGGCCTCTCTTTACTCCTTTTAGACCTTTTTCTTCTTTGGAGTGGGAGA
TCATCTTGGAATGGCGGTGGCCGGGCCCAGGGGCTGCGCTTTTCCCTGACTTCCTCTGCCGGCG
GGACTGAATTTTCTCAAGGCTTACAGGCCCCTCCATGGAGTCCACATAGCCTGTCTAGGCCTGA
TAGCCTTTGTCTCTTTATGTGGAGGGAAAAAGAAAGGTGCCCTGGTGGTTTTGGTGGAGGCTGC
ACAGGTGCACGGTGGGTGGGGAGCTGCCAGGTTCCTTCCCTCGTCTCCCAGCAGACTTTGACTG
ACACTGTAAGTCTCTCTGTGCATTCACCCTGCCAGATACTGAGAGGTTACAAAGGCTCCAGGGC
CTGTACGTCTGTGGCCTCTCCAGAAAAGTGGTTCTCCGCCTTGACTGCACACTGTAACCACCTG
GGGACTTTAAAAAGTACCGAGGCCTGGGGCCCACCCACAAATGCTGATTTAACCCCTCCAGGGT
GGGGTCTGGGCAGTGGGGAGGCAGGAGGGGGTAAAAGCCACCCAGGTGATTCCAGTGACGGGTG
AAGGTTGAGCAGCGACACCTTCCAGCTTCCTGACTGGCTCTGGGAGGGGAGCTGGAAAGGAGGA
CAGGAGGTGGGAACTTTATACACACGGAGCACCTACAGCATGGCTGCGGTTCCACACTCCTCTG
TCATTTAACCTCCACGCATCACCTCATTCTGACATCACGGGGGCGTCACAGCCACAGTGAGGCC
TGGCCTGGCAGAGCAACTCTGGGTGCCCCACTGGGTCCCTCCCACAGTGGCAGGCAAGCCTAAT
GGGAACCCGAGGCAAAAGGAAACATCAGTAATACGAATCCTGTCTTCAAAACTGTGATGTTTTG
TTCACCATGCTTTTTTTTTTTTTGCCTTAATTTAAAAAATATTGCATTAAA

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Protein Sequences


Protein RefSeqs	XP_007978209	(Get FASTA)	NCBI Sequence Viewer
	XP_007978211	(Get FASTA)	NCBI Sequence Viewer
	XP_007978214	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000017068
	ENSCSAP00000017068.1

RefSeq Acc Id:	XP_007978211 ⟸ XM_007980020
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_007978209 ⟸ XM_007980018
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_007978214 ⟸ XM_007980023
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9S879 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000017068 ⟸ ENSCSAT00000017593

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000000940	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000017593.1	UniProtKB/TrEMBL
InterPro	SHIPPO-rpt	UniProtKB/TrEMBL
NCBI Gene	STPG1	ENTREZGENE
PANTHER	PROTEIN STPG4	UniProtKB/TrEMBL
	PROTEIN STPG4	UniProtKB/TrEMBL
Pfam	SHIPPO-rpt	UniProtKB/TrEMBL
UniProt	A0A0D9S879	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar