STPG1 (sperm tail PG-rich repeat containing 1)

Gene: STPG1 (sperm tail PG-rich repeat containing 1) Pan paniscus

Analyze

Symbol:

STPG1

Name:

sperm tail PG-rich repeat containing 1

RGD ID:

11870003

Description:

ENCODES a protein that exhibits chromatin binding (inferred); histone binding (inferred); INVOLVED IN epigenetic programing of male pronucleus (inferred); positive regulation of apoptotic process (inferred); positive regulation of DNA demethylation (inferred); ASSOCIATED WITH 3-Hydroxy-3-Methylglutaryl-CoA Lyase Deficiency (ortholog); genetic disease (ortholog); Van der Woude Syndrome 2 (ortholog); FOUND IN cytoplasm (inferred); female pronucleus (inferred); germinal vesicle (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

O(6)-methylguanine-induced apoptosis 2; UPF0490 protein C1orf201-like

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	202,514,585 - 202,572,956 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	201,618,015 - 201,676,436 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	23,559,787 - 23,616,967 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	24,539,792 - 24,596,633 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	24,539,792 - 24,596,633 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

3-Hydroxy-3-Methylglutaryl-CoA Lyase Deficiency (ISO)

genetic disease (ISO)

Van der Woude Syndrome 2 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

epigenetic programing of male pronucleus (IEA)

positive regulation of apoptotic process (IEA)

positive regulation of DNA demethylation (IEA)

positive regulation of mitochondrial membrane permeability involved in apoptotic process (IEA)

Cellular Component

cytoplasm (IEA)

female pronucleus (IEA)

germinal vesicle (IEA)

male pronucleus (IEA)

mitochondrion (IEA)

nucleus (IEA)

Molecular Function

chromatin binding (IEA)

histone binding (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

STPG1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	202,514,585 - 202,572,956 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	201,618,015 - 201,676,436 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	23,559,787 - 23,616,967 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	24,539,792 - 24,596,633 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	24,539,792 - 24,596,633 (-)	Ensembl	panpan1.1		panPan2

STPG1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	24,356,999 - 24,415,044 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	24,356,999 - 24,416,934 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	24,683,489 - 24,741,534 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	24,556,076 - 24,600,536 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	23,010,632 - 23,055,104 (-)	NCBI		Celera
Cytogenetic Map	1	p36.11	NCBI
HuRef	1	22,936,177 - 22,994,290 (-)	NCBI		HuRef
CHM1_1	1	24,796,156 - 24,854,251 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	24,195,358 - 24,254,108 (-)	NCBI		T2T-CHM13v2.0

Stpg1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	135,221,971 - 135,265,015 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	135,222,101 - 135,265,114 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	135,494,670 - 135,537,803 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	135,494,790 - 135,537,803 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	135,051,902 - 135,093,718 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	134,768,063 - 134,809,881 (+)	NCBI		MGSCv36	mm8
Celera	4	133,689,856 - 133,731,700 (+)	NCBI		Celera
Cytogenetic Map	4	D3	NCBI
cM Map	4	67.7	NCBI

Stpg1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	153,000,663 - 153,053,391 (+)	NCBI		GRCr8
mRatBN7.2	5	147,717,084 - 147,769,792 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	147,726,646 - 147,769,788 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	150,428,390 - 150,471,970 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	152,199,670 - 152,243,232 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	152,184,681 - 152,228,259 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	153,834,263 - 153,888,510 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	153,835,821 - 153,888,506 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	157,600,754 - 157,654,877 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	154,264,790 - 154,308,318 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	5	146,137,198 - 146,180,230 (+)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

Stpg1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955452	4,163,293 - 4,209,514 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955452	4,163,343 - 4,210,698 (-)	NCBI	ChiLan1.0	ChiLan1.0

STPG1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	75,236,800 - 75,286,872 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	75,237,141 - 75,287,953 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	71,809,494 - 71,859,326 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	75,798,891 - 75,847,450 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	75,798,659 - 75,848,531 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	72,621,498 - 72,670,026 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	73,627,688 - 73,677,576 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	74,632,552 - 74,682,183 (+)	NCBI		UU_Cfam_GSD_1.0

Stpg1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	43,533,324 - 43,573,825 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	9,358,116 - 9,398,271 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	9,358,114 - 9,398,379 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

STPG1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	82,052,686 - 82,109,731 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	82,052,682 - 82,111,468 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	75,758,067 - 75,799,025 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

STPG1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	108,281,452 - 108,337,522 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	108,303,904 - 108,338,167 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	8,021,827 - 8,077,925 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Stpg1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624764	8,789,302 - 8,827,262 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624764	8,787,260 - 8,827,279 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008963146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008963147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008963148	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008963150	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034958138	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034958146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034958160	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000014712 ⟹ ENSPPAP00000003173

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	1	24,539,792 - 24,596,633 (-)	Ensembl

RefSeq Acc Id:

ENSPPAT00000014726 ⟹ ENSPPAP00000003182

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	1	24,539,792 - 24,596,582 (-)	Ensembl

RefSeq Acc Id:

XM_008963146 ⟹ XP_008961394

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	202,514,589 - 202,572,956 (+)	NCBI
NHGRI_mPanPan1	1	201,618,024 - 201,676,436 (+)	NCBI
Mhudiblu_PPA_v0	1	23,559,787 - 23,616,966 (-)	NCBI
PanPan1.1	1	24,539,792 - 24,596,633 (-)	NCBI

Sequence:

show sequence

AAACAGAGGATGCCATTGGCTGGAGTTACCTCGCGGACGGCGGAAGGTGGACTCGCGAATGTTA
GGCCTGTGGTTGCCATAGCGACCGGGAGGTTGGGCTGGCCAGATTCAGCTGCCGGGACCGGACC
AGGTGCTTAGGAGAACATGCAGTAGAACCTTTCATCAAACAAATGGAACACGTCACAGAATTTT
GCTAACATGGACAACTCTGCACAGAAAAATGAACGCACTGGCAAACATCCCAGACGTGCCAGTG
AAGTACAGAAAGGTTTTACTGCTGCATATCCAACACAATCCTCCATTCCTTTTAAATCTCAAGC
TTCAGTAATCCCAGAATCAGAAAAAAAAGGATTCAATAGTCAAGCCAAGAGATTTCCTCATAAG
AAGAATGATATCCCAGGACCTGGGTTCTACAATGTTATTCACCAGTCACCGGTGTCCAACAGTG
TCTCATTGTCCAAGAAAGGAACTTGCATGTTTCCCTCAATGTGCGCCCGATTGGACACCATCAT
TTCTAAATACCCTGCAGCGAACGCATACACTATCCCATCGGATTTTATTTCCAAGAGAGACTTT
AGTAATTCGTGTTCCAGCATGTTCCAGTTGCCAAGCTTTATGAAAGCTCTCAAATTTGAAACTC
CTGCACCAAACTATTACAATGCCTCTGTCTCTTGCTGCAAGCAGAGAAACAACGTCTGTGCTCG
AGCCGGGTTTATGTCAAAAACCCAAAGAGGATCTTTCGCTTTTGCTGATAAAGGACCTCCCCCA
GGGCATTATGATATCAACGAATCCCTTGTGAAGCAGTCGCCAAATACATTAATGTCTTGTTTTA
AATCAAAAACCAACCGTGGATTAAAACTGACGTCAACAGGCCCGGGACCTGGTTATTACAACCC
CAGTGATTGCACAAAAGTTCTAAAAAAGACTCTTTTCCCGAAAAACCCCATCCTGAACTTCTCT
GCTCAGCCTTCGCCTCTGCCTCCGAAGCCACCTTTCCCGGGTCCTGGTCAGTATGAGATCGTGG
ACTACTTAGGCCCCCGCAAGCATTTCATCTCTAGTGCATCATTCGTGTCCAATACCAGCCGGTG
GACAGCGGCACCGCCTCAGCCAGGCCTGCCTGGCCCAGCTACATACAAGCCAGAGCTTCCAGGA
AAGCAGTCCTTCCTCTACAACGAGGACAAGAAATGGATCCCGGTTCTGTAGGGATGTCACACAA
GGTCAAGGAGAACTCCAGCCACCAGCCCACCCTGCCCAGCATCCCCAGGACATTCCTCAGGAGG
AGACCGATCATGAGTGTGGCAGCTGACAACTTGGGGGGTGGCCCTACCACTCTGGCCTGGCATC
CTAGCCGGACTGCTGCCATTGCCTTTGTCTTGAGCTGGAGACATTGCTCCCTGGAGACTTCACC
CCAGCCCCACAGACTCCAGTGGCTTCCTGAGCAGAAGGGAGGAGTGGACAGAGCCCCCTGGCTG
CTTCCGCACGCACCCATCCAGGCTGCCTTCTGGCACGACTCCCTGCCGCAGACTGAAGGGACTC
CTGAAGCGCAGACTTCAAGGAGGATCAGTCCACCCTGAAGGTGGCCAAGCCTGGAAGCCCCACC
CTTCCCTGTTTCATTCCTTCATTCATTTACGCATTCATTCATTCCCTCACTCCTGCCTTTCTCA
TTTGTCCCTTTCTGACCTCACTCACTTACTGTCTACTGGGCGAAAGCTACCTGCAGGCAGGTGA
TGCTTTTTCCACCAGTCCACAGCTTCCTTTCTAAAGTGACCACCTGTTTGGAAAGACCTCTCTT
TACTCCTTTTAGACCTTTTACTCTTTGGAGTGGGAGATCATCTTGGAATGGCAGTGGCCGGGCC
CGGGGGCTGCGCTTTTCCCTGACTTTCTCTGCTGGCGGGACTGAATTTTCTCAAGGCTTACAGG
CCCTTCCATGGAGTCCACATGGCCTGTCTAGGCCTGATAGCTTTTGTCTCTCTATGTGGAGGGA
AAAAGAAATGTGCCCTAGTGGTTTTGGTGGAGGCTGCACAGATTCGCGGTGGGTGGGGAGCTGC
CAGGCTCCTTTTCTGATCTCCCAGCGGGCTTTGACTGACGCTGTTAAGTCTCTCTGTACATTAG
CCCCGCCAGATACCGAGAGGTTACAAAGCCTCCAAGGCCTGTACAACTGTGGCCTCTCCAGAGA
AGTGGTTCTCAGCCTTGACTGCACACTGTAATCACCTGGGGACTTTAAAAAGTACTGAGGCCTG
GGGCCCACCCACAAATGCTGATTTAACTCCTCCAGGGTGGGGTCTGGGCAGTGGGGGCGGGGAG
GCAGGAGCCACCCAGGTGATTCCAATGATAGGTGTAGGTTGAGAAGCGCCACCTTCCAGCTTCC
TAACTGGCTCTGGGAGGGGAGCTGGGTGGGAAGTTCAGGAGGTGGGAACTTTGTACACGCAGAG
CACCTGGAGCACCTACAGCATGGCTGTGGTTCCACACTCCTCTGTCATTTAACCTTCACACATC
ACCTCGTTCTGACATCAAGGGTGCGTCACAGCCACAGTGAGGCCTGGCCTGGGCAGAGCAACTC
TGGGTGCCCCACTGGGTCCCTCCCACAGGGGCAGGCAAGCCTAATGGGAACCCAAGGCAAAAGG
AAACATCAGTAATACGAATCCTGTCTTTAAAACTGTGATGTTTTGTTCACCGTGGATTTTTTTT
TGGGGGGGGCCTTAATTTTAAAAATATTGCATTAAACTTATTTATCTTGCTTATTGA

hide sequence

RefSeq Acc Id:

XM_008963147 ⟹ XP_008961395

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	202,514,585 - 202,572,956 (+)	NCBI
NHGRI_mPanPan1	1	201,618,015 - 201,676,436 (+)	NCBI
Mhudiblu_PPA_v0	1	23,559,787 - 23,616,967 (-)	NCBI
PanPan1.1	1	24,539,792 - 24,596,582 (-)	NCBI

Sequence:

show sequence

CTCGCGAATGTTAGGCCTGTGGTTGCCATAGCGACCGGGAGGTTGGGCTGGCCAGATTCAGCTG
CCGGGACCGGACCAGATTCTAGGTCCATGCCATCCTGTCATGGACAGTTATACAGGTGGACCAG
TGAGGCACATCTGGGCAGTGCTCTGTTCACATCTGGCCTGTACCTGCTCTCATCCTGCCTTCAC
AGGTGCTTAGGAGAACATGCAGTAGAACCTTTCATCAAACAAATGGAACACGTCACAGAATTTT
GCTAACATGGACAACTCTGCACAGAAAAATGAACGCACTGGCAAACATCCCAGACGTGCCAGTG
AAGTACAGAAAGGTTTTACTGCTGCATATCCAACACAATCCTCCATTCCTTTTAAATCTCAAGC
TTCAGTAATCCCAGAATCAGAAAAAAAAGGATTCAATAGTCAAGCCAAGAGATTTCCTCATAAG
AAGAATGATATCCCAGGACCTGGGTTCTACAATGTTATTCACCAGTCACCGGTGTCCAACAGTG
TCTCATTGTCCAAGAAAGGAACTTGCATGTTTCCCTCAATGTGCGCCCGATTGGACACCATCAT
TTCTAAATACCCTGCAGCGAACGCATACACTATCCCATCGGATTTTATTTCCAAGAGAGACTTT
AGTAATTCGTGTTCCAGCATGTTCCAGTTGCCAAGCTTTATGAAAGCTCTCAAATTTGAAACTC
CTGCACCAAACTATTACAATGCCTCTGTCTCTTGCTGCAAGCAGAGAAACAACGTCTGTGCTCG
AGCCGGGTTTATGTCAAAAACCCAAAGAGGATCTTTCGCTTTTGCTGATAAAGGACCTCCCCCA
GGGCATTATGATATCAACGAATCCCTTGTGAAGCAGTCGCCAAATACATTAATGTCTTGTTTTA
AATCAAAAACCAACCGTGGATTAAAACTGACGTCAACAGGCCCGGGACCTGGTTATTACAACCC
CAGTGATTGCACAAAAGTTCTAAAAAAGACTCTTTTCCCGAAAAACCCCATCCTGAACTTCTCT
GCTCAGCCTTCGCCTCTGCCTCCGAAGCCACCTTTCCCGGGTCCTGGTCAGTATGAGATCGTGG
ACTACTTAGGCCCCCGCAAGCATTTCATCTCTAGTGCATCATTCGTGTCCAATACCAGCCGGTG
GACAGCGGCACCGCCTCAGCCAGGCCTGCCTGGCCCAGCTACATACAAGCCAGAGCTTCCAGGA
AAGCAGTCCTTCCTCTACAACGAGGACAAGAAATGGATCCCGGTTCTGTAGGGATGTCACACAA
GGTCAAGGAGAACTCCAGCCACCAGCCCACCCTGCCCAGCATCCCCAGGACATTCCTCAGGAGG
AGACCGATCATGAGTGTGGCAGCTGACAACTTGGGGGGTGGCCCTACCACTCTGGCCTGGCATC
CTAGCCGGACTGCTGCCATTGCCTTTGTCTTGAGCTGGAGACATTGCTCCCTGGAGACTTCACC
CCAGCCCCACAGACTCCAGTGGCTTCCTGAGCAGAAGGGAGGAGTGGACAGAGCCCCCTGGCTG
CTTCCGCACGCACCCATCCAGGCTGCCTTCTGGCACGACTCCCTGCCGCAGACTGAAGGGACTC
CTGAAGCGCAGACTTCAAGGAGGATCAGTCCACCCTGAAGGTGGCCAAGCCTGGAAGCCCCACC
CTTCCCTGTTTCATTCCTTCATTCATTTACGCATTCATTCATTCCCTCACTCCTGCCTTTCTCA
TTTGTCCCTTTCTGACCTCACTCACTTACTGTCTACTGGGCGAAAGCTACCTGCAGGCAGGTGA
TGCTTTTTCCACCAGTCCACAGCTTCCTTTCTAAAGTGACCACCTGTTTGGAAAGACCTCTCTT
TACTCCTTTTAGACCTTTTACTCTTTGGAGTGGGAGATCATCTTGGAATGGCAGTGGCCGGGCC
CGGGGGCTGCGCTTTTCCCTGACTTTCTCTGCTGGCGGGACTGAATTTTCTCAAGGCTTACAGG
CCCTTCCATGGAGTCCACATGGCCTGTCTAGGCCTGATAGCTTTTGTCTCTCTATGTGGAGGGA
AAAAGAAATGTGCCCTAGTGGTTTTGGTGGAGGCTGCACAGATTCGCGGTGGGTGGGGAGCTGC
CAGGCTCCTTTTCTGATCTCCCAGCGGGCTTTGACTGACGCTGTTAAGTCTCTCTGTACATTAG
CCCCGCCAGATACCGAGAGGTTACAAAGCCTCCAAGGCCTGTACAACTGTGGCCTCTCCAGAGA
AGTGGTTCTCAGCCTTGACTGCACACTGTAATCACCTGGGGACTTTAAAAAGTACTGAGGCCTG
GGGCCCACCCACAAATGCTGATTTAACTCCTCCAGGGTGGGGTCTGGGCAGTGGGGGCGGGGAG
GCAGGAGCCACCCAGGTGATTCCAATGATAGGTGTAGGTTGAGAAGCGCCACCTTCCAGCTTCC
TAACTGGCTCTGGGAGGGGAGCTGGGTGGGAAGTTCAGGAGGTGGGAACTTTGTACACGCAGAG
CACCTGGAGCACCTACAGCATGGCTGTGGTTCCACACTCCTCTGTCATTTAACCTTCACACATC
ACCTCGTTCTGACATCAAGGGTGCGTCACAGCCACAGTGAGGCCTGGCCTGGGCAGAGCAACTC
TGGGTGCCCCACTGGGTCCCTCCCACAGGGGCAGGCAAGCCTAATGGGAACCCAAGGCAAAAGG
AAACATCAGTAATACGAATCCTGTCTTTAAAACTGTGATGTTTTGTTCACCGTGGATTTTTTTT
TGGGGGGGGCCTTAATTTTAAAAATATTGCATTAAACTTATTTATCTTGCTTATTGA

hide sequence

RefSeq Acc Id:

XM_008963148 ⟹ XP_008961396

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	202,514,795 - 202,572,956 (+)	NCBI
NHGRI_mPanPan1	1	201,618,054 - 201,676,436 (+)	NCBI
Mhudiblu_PPA_v0	1	23,559,787 - 23,616,966 (-)	NCBI
PanPan1.1	1	24,539,792 - 24,596,633 (-)	NCBI

Sequence:

show sequence

AAACAGAGGATGCCATTGGCTGGAGTTACCTCGCGGACGGCGGAAGGTGGACTCGCGAATGTTA
GGCCTGTGGTTGCCATAGCGACCGGGAGGTTGGGCTGGCCAGATTCAGCTGCCGGGACCGGACC
AGGTGCTTAGGAGAACATGCAGTAGAACCTTTCATCAAACAAATGGAACACGTCACAGAATTTT
GCTAACATGGACAACTCTGCACAGAAAAATGAACGCACTGGCAAACATCCCAGACGTGCCAGTG
AAGTACAGAAAGAATGATATCCCAGGACCTGGGTTCTACAATGTTATTCACCAGTCACCGGTGT
CCAACAGTGTCTCATTGTCCAAGAAAGGAACTTGCATGTTTCCCTCAATGTGCGCCCGATTGGA
CACCATCATTTCTAAATACCCTGCAGCGAACGCATACACTATCCCATCGGATTTTATTTCCAAG
AGAGACTTTAGTAATTCGTGTTCCAGCATGTTCCAGTTGCCAAGCTTTATGAAAGCTCTCAAAT
TTGAAACTCCTGCACCAAACTATTACAATGCCTCTGTCTCTTGCTGCAAGCAGAGAAACAACGT
CTGTGCTCGAGCCGGGTTTATGTCAAAAACCCAAAGAGGATCTTTCGCTTTTGCTGATAAAGGA
CCTCCCCCAGGGCATTATGATATCAACGAATCCCTTGTGAAGCAGTCGCCAAATACATTAATGT
CTTGTTTTAAATCAAAAACCAACCGTGGATTAAAACTGACGTCAACAGGCCCGGGACCTGGTTA
TTACAACCCCAGTGATTGCACAAAAGTTCTAAAAAAGACTCTTTTCCCGAAAAACCCCATCCTG
AACTTCTCTGCTCAGCCTTCGCCTCTGCCTCCGAAGCCACCTTTCCCGGGTCCTGGTCAGTATG
AGATCGTGGACTACTTAGGCCCCCGCAAGCATTTCATCTCTAGTGCATCATTCGTGTCCAATAC
CAGCCGGTGGACAGCGGCACCGCCTCAGCCAGGCCTGCCTGGCCCAGCTACATACAAGCCAGAG
CTTCCAGGAAAGCAGTCCTTCCTCTACAACGAGGACAAGAAATGGATCCCGGTTCTGTAGGGAT
GTCACACAAGGTCAAGGAGAACTCCAGCCACCAGCCCACCCTGCCCAGCATCCCCAGGACATTC
CTCAGGAGGAGACCGATCATGAGTGTGGCAGCTGACAACTTGGGGGGTGGCCCTACCACTCTGG
CCTGGCATCCTAGCCGGACTGCTGCCATTGCCTTTGTCTTGAGCTGGAGACATTGCTCCCTGGA
GACTTCACCCCAGCCCCACAGACTCCAGTGGCTTCCTGAGCAGAAGGGAGGAGTGGACAGAGCC
CCCTGGCTGCTTCCGCACGCACCCATCCAGGCTGCCTTCTGGCACGACTCCCTGCCGCAGACTG
AAGGGACTCCTGAAGCGCAGACTTCAAGGAGGATCAGTCCACCCTGAAGGTGGCCAAGCCTGGA
AGCCCCACCCTTCCCTGTTTCATTCCTTCATTCATTTACGCATTCATTCATTCCCTCACTCCTG
CCTTTCTCATTTGTCCCTTTCTGACCTCACTCACTTACTGTCTACTGGGCGAAAGCTACCTGCA
GGCAGGTGATGCTTTTTCCACCAGTCCACAGCTTCCTTTCTAAAGTGACCACCTGTTTGGAAAG
ACCTCTCTTTACTCCTTTTAGACCTTTTACTCTTTGGAGTGGGAGATCATCTTGGAATGGCAGT
GGCCGGGCCCGGGGGCTGCGCTTTTCCCTGACTTTCTCTGCTGGCGGGACTGAATTTTCTCAAG
GCTTACAGGCCCTTCCATGGAGTCCACATGGCCTGTCTAGGCCTGATAGCTTTTGTCTCTCTAT
GTGGAGGGAAAAAGAAATGTGCCCTAGTGGTTTTGGTGGAGGCTGCACAGATTCGCGGTGGGTG
GGGAGCTGCCAGGCTCCTTTTCTGATCTCCCAGCGGGCTTTGACTGACGCTGTTAAGTCTCTCT
GTACATTAGCCCCGCCAGATACCGAGAGGTTACAAAGCCTCCAAGGCCTGTACAACTGTGGCCT
CTCCAGAGAAGTGGTTCTCAGCCTTGACTGCACACTGTAATCACCTGGGGACTTTAAAAAGTAC
TGAGGCCTGGGGCCCACCCACAAATGCTGATTTAACTCCTCCAGGGTGGGGTCTGGGCAGTGGG
GGCGGGGAGGCAGGAGCCACCCAGGTGATTCCAATGATAGGTGTAGGTTGAGAAGCGCCACCTT
CCAGCTTCCTAACTGGCTCTGGGAGGGGAGCTGGGTGGGAAGTTCAGGAGGTGGGAACTTTGTA
CACGCAGAGCACCTGGAGCACCTACAGCATGGCTGTGGTTCCACACTCCTCTGTCATTTAACCT
TCACACATCACCTCGTTCTGACATCAAGGGTGCGTCACAGCCACAGTGAGGCCTGGCCTGGGCA
GAGCAACTCTGGGTGCCCCACTGGGTCCCTCCCACAGGGGCAGGCAAGCCTAATGGGAACCCAA
GGCAAAAGGAAACATCAGTAATACGAATCCTGTCTTTAAAACTGTGATGTTTTGTTCACCGTGG
ATTTTTTTTTGGGGGGGGCCTTAATTTTAAAAATATTGCATTAAACTTATTTATCTTGCTTATT
GA

hide sequence

RefSeq Acc Id:

XM_034958138 ⟹ XP_034814029

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	202,514,587 - 202,572,956 (+)	NCBI
NHGRI_mPanPan1	1	201,618,022 - 201,676,436 (+)	NCBI
Mhudiblu_PPA_v0	1	23,559,787 - 23,616,966 (-)	NCBI

RefSeq Acc Id:

XM_034958146 ⟹ XP_034814037

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	202,514,798 - 202,572,956 (+)	NCBI
NHGRI_mPanPan1	1	201,618,056 - 201,676,436 (+)	NCBI
Mhudiblu_PPA_v0	1	23,559,787 - 23,616,966 (-)	NCBI

RefSeq Acc Id:

XM_034958160 ⟹ XP_034814051

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	202,514,798 - 202,572,956 (+)	NCBI
NHGRI_mPanPan1	1	201,618,056 - 201,676,436 (+)	NCBI
Mhudiblu_PPA_v0	1	23,559,787 - 23,616,966 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_008961394	(Get FASTA)	NCBI Sequence Viewer
	XP_008961395	(Get FASTA)	NCBI Sequence Viewer
	XP_008961396	(Get FASTA)	NCBI Sequence Viewer
	XP_034814029	(Get FASTA)	NCBI Sequence Viewer
	XP_034814037	(Get FASTA)	NCBI Sequence Viewer
	XP_034814051	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000003173
	ENSPPAP00000003173.1
	ENSPPAP00000003182
	ENSPPAP00000003182.1

RefSeq Acc Id:	XP_008961396 ⟸ XM_008963148
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R8ZE84 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNALANIPDVPVKYRKNDIPGPGFYNVIHQSPVSNSVSLSKKGTCMFPSMCARLDTIISKYPAA NAYTIPSDFISKRDFSNSCSSMFQLPSFMKALKFETPAPNYYNASVSCCKQRNNVCARAGFMSK TQRGSFAFADKGPPPGHYDINESLVKQSPNTLMSCFKSKTNRGLKLTSTGPGPGYYNPSDCTKV LKKTLFPKNPILNFSAQPSPLPPKPPFPGPGQYEIVDYLGPRKHFISSASFVSNTSRWTAAPPQ PGLPGPATYKPELPGKQSFLYNEDKKWIPVL hide sequence

RefSeq Acc Id:	XP_008961394 ⟸ XM_008963146
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R8ZDR7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDNSAQKNERTGKHPRRASEVQKGFTAAYPTQSSIPFKSQASVIPESEKKGFNSQAKRFPHKKN DIPGPGFYNVIHQSPVSNSVSLSKKGTCMFPSMCARLDTIISKYPAANAYTIPSDFISKRDFSN SCSSMFQLPSFMKALKFETPAPNYYNASVSCCKQRNNVCARAGFMSKTQRGSFAFADKGPPPGH YDINESLVKQSPNTLMSCFKSKTNRGLKLTSTGPGPGYYNPSDCTKVLKKTLFPKNPILNFSAQ PSPLPPKPPFPGPGQYEIVDYLGPRKHFISSASFVSNTSRWTAAPPQPGLPGPATYKPELPGKQ SFLYNEDKKWIPVL hide sequence

RefSeq Acc Id:	XP_008961395 ⟸ XM_008963147
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R8ZDR7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDNSAQKNERTGKHPRRASEVQKGFTAAYPTQSSIPFKSQASVIPESEKKGFNSQAKRFPHKKN DIPGPGFYNVIHQSPVSNSVSLSKKGTCMFPSMCARLDTIISKYPAANAYTIPSDFISKRDFSN SCSSMFQLPSFMKALKFETPAPNYYNASVSCCKQRNNVCARAGFMSKTQRGSFAFADKGPPPGH YDINESLVKQSPNTLMSCFKSKTNRGLKLTSTGPGPGYYNPSDCTKVLKKTLFPKNPILNFSAQ PSPLPPKPPFPGPGQYEIVDYLGPRKHFISSASFVSNTSRWTAAPPQPGLPGPATYKPELPGKQ SFLYNEDKKWIPVL hide sequence

RefSeq Acc Id:	XP_034814029 ⟸ XM_034958138
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R8ZE84 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_034814037 ⟸ XM_034958146
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_034814051 ⟸ XM_034958160
- Peptide Label:	isoform X3

RefSeq Acc Id:

ENSPPAP00000003173 ⟸ ENSPPAT00000014712

RefSeq Acc Id:

ENSPPAP00000003182 ⟸ ENSPPAT00000014726

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000013443	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000014712.1	UniProtKB/TrEMBL
	ENSPPAT00000014726.1	UniProtKB/TrEMBL
InterPro	SHIPPO-rpt	UniProtKB/TrEMBL
KEGG Report	pps:100992263	UniProtKB/TrEMBL
NCBI Gene	STPG1	ENTREZGENE
PANTHER	PROTEIN STPG4	UniProtKB/TrEMBL
	PROTEIN STPG4	UniProtKB/TrEMBL
Pfam	SHIPPO-rpt	UniProtKB/TrEMBL
UniProt	A0A2R8ZDR7	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R8ZE84	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar