Gm13036 (predicted gene 13036) - Rat Genome Database

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Gene: Gm13036 (predicted gene 13036) Mus musculus
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Symbol: Gm13036
Name: predicted gene 13036
RGD ID: 5146849
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: Cdv3  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394145,995,344 - 145,996,287 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4145,995,346 - 145,996,093 (+)EnsemblGRCm39 Ensembl
GRCm384146,058,774 - 146,059,717 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4146,058,776 - 146,059,523 (+)EnsemblGRCm38mm10GRCm38
MGSCv374146,026,177 - 146,026,918 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Cytogenetic Map4E1NCBI
cM Map478.36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm13036
68 total Variants

Predicted Target Of
Summary Value
Count of predictions:73
Count of miRNA genes:73
Interacting mature miRNAs:73
Transcripts:ENSMUST00000117799
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 43 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1301267Bcmd2_mB cell maturation defect 2 (mouse)Not determined4133154678150789451Mouse
4142077Ignpq2_mIgA nephropathy QTL 2 (mouse)Not determined4133676733156860686Mouse
4141180Ssic1_msusceptibility to small intestinal cancer 1 (mouse)Not determined120674005154674151Mouse
1301584Lrdg2_mlight induced retinal degeneration 2 (mouse)Not determined4129465811151654550Mouse
4142139Adip12_madiposity 12 (mouse)Not determined4124621281156860686Mouse
10047132Albq19_malbuminuria QTL 19 (mouse)Not determined4112824389146824389Mouse
1302102Bis1_mbeta-carboline-induced seizures 1 (mouse)Not determined4119864433153864536Mouse
10043996Gct5_mgranulosa cell tumorigenesis 5 (mouse)Not determined4127784226156860686Mouse
1301525Lmb1_mlupus in MRL and B6 F2 cross (mouse)Not determined4124264957150676858Mouse
26884445Sklq7_mskull length QTL 7, 10 week (mouse)468018237150884457Mouse

1 to 10 of 43 rows





RefSeq Transcripts NG_020617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CR788296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU463308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000117799
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4145,995,346 - 145,996,093 (+)Ensembl
GRCm38.p6 Ensembl4146,058,776 - 146,059,523 (+)Ensembl


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000081595 Ensembl
MGD MGI:3650250 ENTREZGENE
NCBI Gene 100418368 ENTREZGENE
PhenoGen Gm13036 PhenoGen