Cdv3 (carnitine deficiency-associated gene expressed in ventricle 3) - Rat Genome Database
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Gene: Cdv3 (carnitine deficiency-associated gene expressed in ventricle 3) Mus musculus
Analyze
Symbol: Cdv3
Name: carnitine deficiency-associated gene expressed in ventricle 3
RGD ID: 1614062
MGI Page MGI
Description: Localizes to cytoplasm. Orthologous to human CDV3 (CDV3 homolog); INTERACTS WITH 1,2-dichloroethane; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 2510010F10Rik; C230084J24Rik; C79446; carnitine deficiency-associated protein 3; carnitine deficiency-associated protein CDV3A; carnitine deficiency-associated protein CDV3B; TPP; TPP36; tyrosine-phosphorylated protein 36
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm13036   Gm13146   Gm13223   Gm13238   Gm13241   Gm14239  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399103,230,301 - 103,243,034 (-)NCBIGRCm39mm39
GRCm389103,353,102 - 103,365,835 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9103,353,094 - 103,365,840 (-)EnsemblGRCm38mm10GRCm38
MGSCv379103,255,432 - 103,268,110 (-)NCBIGRCm37mm9NCBIm37
MGSCv369103,211,258 - 103,223,688 (-)NCBImm8
Celera9102,904,153 - 102,916,651 (-)NCBICelera
Cytogenetic Map9F1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,IDA)
cytosol  (ISO)
nucleus  (IDA)
plasma membrane  (ISO)

Molecular Function

References

References - curated
1. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12359334   PMID:12466851   PMID:12477932   PMID:12520002   PMID:12606058  
PMID:12904583   PMID:14610273   PMID:15782199   PMID:16141072   PMID:16141073   PMID:17967808   PMID:18799693   PMID:21267068   PMID:21873635  


Genomics

Comparative Map Data
Cdv3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399103,230,301 - 103,243,034 (-)NCBIGRCm39mm39
GRCm389103,353,102 - 103,365,835 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9103,353,094 - 103,365,840 (-)EnsemblGRCm38mm10GRCm38
MGSCv379103,255,432 - 103,268,110 (-)NCBIGRCm37mm9NCBIm37
MGSCv369103,211,258 - 103,223,688 (-)NCBImm8
Celera9102,904,153 - 102,916,651 (-)NCBICelera
Cytogenetic Map9F1NCBI
CDV3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl3133,573,686 - 133,590,261 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl3133,573,730 - 133,590,261 (+)EnsemblGRCh38hg38GRCh38
GRCh383133,573,629 - 133,590,274 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh373133,292,434 - 133,309,118 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363134,775,264 - 134,791,795 (+)NCBINCBI36hg18NCBI36
Celera3131,719,262 - 131,736,216 (+)NCBI
Cytogenetic Map3q22.1NCBI
HuRef3130,671,912 - 130,688,602 (+)NCBIHuRef
CHM1_13133,255,826 - 133,272,510 (+)NCBICHM1_1
Cdv3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08111,837,232 - 111,850,393 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8111,839,091 - 111,850,393 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08111,229,075 - 111,242,236 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48108,365,896 - 108,376,263 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18108,385,351 - 108,395,718 (-)NCBI
Celera8103,312,918 - 103,323,287 (-)NCBICelera
Cytogenetic Map8q32NCBI
Cdv3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555014,981,664 - 4,999,745 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555014,984,239 - 4,999,414 (-)NCBIChiLan1.0ChiLan1.0
CDV3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.13138,117,079 - 138,132,961 (+)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v03130,641,137 - 130,657,664 (+)NCBIMhudiblu_PPA_v0panPan3
CDV3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2330,475,978 - 30,481,632 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12330,464,103 - 30,483,633 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Cdv3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365296,764,838 - 6,781,696 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CDV3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1374,705,094 - 74,721,145 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11374,705,351 - 74,721,154 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21382,277,390 - 82,283,725 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CDV3
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11556,748,457 - 56,752,135 (-)NCBI
Cdv3
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247309,888,328 - 9,904,516 (+)NCBI

Position Markers
RH126667  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389103,362,402 - 103,362,601UniSTSGRCm38
MGSCv379103,264,732 - 103,264,931UniSTSGRCm37
Celera9102,913,451 - 102,913,650UniSTS
Cytogenetic Map9F1UniSTS
Whitehead/MRC_RH91054.02UniSTS
Cdv3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389103,363,823 - 103,363,991UniSTSGRCm38
MGSCv379103,266,153 - 103,266,321UniSTSGRCm37
Celera9102,914,873 - 102,915,041UniSTS
Cytogenetic Map9F1UniSTS
cM Map9 UniSTS
D9Mgc22  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389103,357,305 - 103,357,403UniSTSGRCm38
MGSCv379103,259,635 - 103,259,733UniSTSGRCm37
Celera9102,908,356 - 102,908,454UniSTS
Cytogenetic Map9F1UniSTS
cM Map956.0UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959990000109260000Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63332429120362868Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63332429120362868Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963332429120362868Mouse
1301621Hpic1_mhaloperidol-induced catalepsy 1 (mouse)Not determined969546513103546645Mouse
1301573Etohcta8_methanol conditioned taste aversion 8 (mouse)Not determined972977005106977152Mouse
10054068El8_mepilepsy 8 (mouse)Not determined972977005106977152Mouse
1301725Lifespan1_mlife span 1 (mouse)Not determined974368177108368325Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975775364114474379Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975775364114474379Mouse
1301407Rapop2_mradiation-induced apoptosis 2 (mouse)Not determined976535936110536130Mouse
1301192Skts6_mskin tumor susceptibility 6 (mouse)Not determined978640645112640755Mouse
10401247Bglu14_mblood glucose level 14 (mouse)Not determined979397810113397888Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981798268115798392Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982910333116910428Mouse
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982910333116910428Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982910333116910428Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984528818118528921Mouse
10412180Msam3_mmuscle, skeletal, activity measure 3 (mouse)Not determined985897510108641186Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986230401120230530Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986239845120289624Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986748483120748483Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987800000121800000Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989284925123284925Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989412277123412396Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989563342123563342Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989977005118938021Mouse
12910770Splic1_mspleen iron content 1 (mouse)991413879124595110Mouse
12910772Lvic6_mliver iron content 6 (mouse)991413879124595110Mouse
12910773Splic3_mspleen iron content 3 (mouse)991413879124595110Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991641084124595110Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991641084124595110Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991641084124595110Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991641084124595110Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991641084124595110Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991641084124595110Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991683173124595110Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991683173124595110Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991683173124595110Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993762590124595110Mouse
1301484Bwq6_mbody weight (mouse)Not determined993762590124595110Mouse
14746992Manh67_mmandible shape 67 (mouse)994036768124595110Mouse
11081166Psl5_mpromotion susceptibility QTL 5 (mouse)994981301112872929Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996917590124595110Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9101060861124595110Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9102000187124595110Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9102000187124595110Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103289445124595110Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103289445124595110Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103289445124595110Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2582
Count of miRNA genes:548
Interacting mature miRNAs:673
Transcripts:ENSMUST00000035484, ENSMUST00000072249, ENSMUST00000116517
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001134426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001134427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_175565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_175833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006511756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006511758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB046372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC122747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF215660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF320340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH011369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI851067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK142937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC030486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC052770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC062156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC064103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC096479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L22067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000035484   ⟹   ENSMUSP00000044420
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9103,353,094 - 103,365,840 (-)Ensembl
RefSeq Acc Id: ENSMUST00000072249   ⟹   ENSMUSP00000072101
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9103,353,108 - 103,365,538 (-)Ensembl
RefSeq Acc Id: ENSMUST00000116517   ⟹   ENSMUSP00000112216
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9103,353,104 - 103,364,897 (-)Ensembl
RefSeq Acc Id: ENSMUST00000189875   ⟹   ENSMUSP00000140690
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9103,355,924 - 103,365,127 (-)Ensembl
RefSeq Acc Id: ENSMUST00000189896   ⟹   ENSMUSP00000139440
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9103,355,950 - 103,365,619 (-)Ensembl
RefSeq Acc Id: ENSMUST00000190127
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9103,361,604 - 103,364,980 (-)Ensembl
RefSeq Acc Id: ENSMUST00000190226   ⟹   ENSMUSP00000140900
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9103,353,104 - 103,364,979 (-)Ensembl
RefSeq Acc Id: NM_001134426   ⟹   NP_001127898
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399103,230,301 - 103,242,979 (-)NCBI
GRCm389103,353,102 - 103,365,780 (-)NCBI
MGSCv379103,255,432 - 103,268,110 (-)RGD
Celera9102,904,153 - 102,916,651 (-)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001134427   ⟹   NP_001127899
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399103,230,301 - 103,242,178 (-)NCBI
GRCm389103,353,102 - 103,364,979 (-)NCBI
MGSCv379103,255,432 - 103,268,110 (-)RGD
Celera9102,904,153 - 102,916,651 (-)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_175565   ⟹   NP_780774
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399103,230,301 - 103,242,979 (-)NCBI
GRCm389103,353,102 - 103,365,780 (-)NCBI
MGSCv379103,255,432 - 103,268,110 (-)RGD
Celera9102,904,153 - 102,916,651 (-)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_175833   ⟹   NP_787027
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399103,230,301 - 103,242,979 (-)NCBI
GRCm389103,353,102 - 103,365,780 (-)NCBI
MGSCv379103,255,432 - 103,268,110 (-)RGD
Celera9102,904,153 - 102,916,651 (-)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006511756   ⟹   XP_006511819
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399103,230,301 - 103,243,034 (-)NCBI
GRCm389103,353,102 - 103,365,835 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006511758   ⟹   XP_006511821
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399103,230,301 - 103,242,864 (-)NCBI
GRCm389103,353,102 - 103,364,987 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_780774   ⟸   NM_175565
- Peptide Label: isoform a
- UniProtKB: Q4VAA2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_787027   ⟸   NM_175833
- Peptide Label: isoform b
- UniProtKB: Q4VAA2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001127898   ⟸   NM_001134426
- Peptide Label: isoform c
- UniProtKB: A0A087WNP6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001127899   ⟸   NM_001134427
- Peptide Label: isoform d
- UniProtKB: F8WGL9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006511819   ⟸   XM_006511756
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006511821   ⟸   XM_006511758
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSMUSP00000072101   ⟸   ENSMUST00000072249
RefSeq Acc Id: ENSMUSP00000140900   ⟸   ENSMUST00000190226
RefSeq Acc Id: ENSMUSP00000044420   ⟸   ENSMUST00000035484
RefSeq Acc Id: ENSMUSP00000140690   ⟸   ENSMUST00000189875
RefSeq Acc Id: ENSMUSP00000139440   ⟸   ENSMUST00000189896
RefSeq Acc Id: ENSMUSP00000112216   ⟸   ENSMUST00000116517

Promoters
RGD ID:6844101
Promoter ID:MM_KWN:58585
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000072249,   NM_001134426,   NM_175565,   NM_175833,   UC009RGN.1,   UC009RGO.1,   UC009RGS.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369103,267,151 - 103,268,512 (-)MPROMDB
RGD ID:8670636
Promoter ID:EPDNEW_M13349
Type:initiation region
Name:Cdv3_1
Description:Mus musculus carnitine deficiency-associated gene expressed inventricle 3 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389103,365,668 - 103,365,728EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2448759 AgrOrtholog
Ensembl Genes ENSMUSG00000032803 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000044420 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000072101 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000112216 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000139440 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000140690 UniProtKB/TrEMBL
  ENSMUSP00000140900 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000035484 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000072249 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000116517 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000189875 UniProtKB/TrEMBL
  ENSMUST00000189896 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000190226 UniProtKB/TrEMBL
InterPro CDV3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:321022 UniProtKB/Swiss-Prot
MGD MGI:2448759 ENTREZGENE
NCBI Gene 321022 ENTREZGENE
PANTHER PTHR16284 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CDV3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cdv3 PhenoGen
UniGene Mm.261025 ENTREZGENE
  Mm.436585 ENTREZGENE
  Mm.491128 ENTREZGENE
UniProt A0A087WNP6 ENTREZGENE, UniProtKB/TrEMBL
  A0A087WRM0_MOUSE UniProtKB/TrEMBL
  A0A087WS49_MOUSE UniProtKB/TrEMBL
  CDV3_MOUSE UniProtKB/Swiss-Prot
  F8WGL9 ENTREZGENE, UniProtKB/TrEMBL
  Q4VAA2 ENTREZGENE
UniProt Secondary Q6P6L7 UniProtKB/Swiss-Prot
  Q920C7 UniProtKB/Swiss-Prot
  Q920I4 UniProtKB/Swiss-Prot