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Gene: Aurkaip1 (aurora kinase A interacting protein 1) Mus musculus

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Symbol:

Aurkaip1

Name:

aurora kinase A interacting protein 1

RGD ID:

1615901

MGI Page

MGI

Description:

Predicted to contribute to ubiquitin-protein transferase activity. Predicted to be involved in positive regulation of proteolysis and protein ubiquitination. Located in mitochondrion. Is expressed in several structures, including alimentary system; genitourinary system; integumental system; nervous system; and sensory organ. Orthologous to human AURKAIP1 (aurora kinase A interacting protein 1).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

0610033H09Rik; 28S ribosomal protein S38, mitochondrial; Aip; Akip; AURKA-interacting protein; aurora kinase A-interacting protein; Aurora-A kinase interacting protein; MRP-S38; small ribosomal subunit protein mS38

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	155,915,709 - 155,917,555 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	155,915,729 - 155,917,587 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	155,831,269 - 155,833,098 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	155,831,272 - 155,833,130 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	155,205,755 - 155,207,168 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	154,675,446 - 154,676,859 (+)	NCBI		MGSCv36	mm8
Celera	4	158,102,482 - 158,103,895 (+)	NCBI		Celera
Cytogenetic Map	4	E2	NCBI
cM Map	4	87.55	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

chromosome 1p36 deletion syndrome (ISO)

congenital myasthenic syndrome 8 (ISO)

dilated cardiomyopathy 1LL (ISO)

Ehlers-Danlos syndrome spondylodysplastic type 2 (ISO)

Goldberg-Shprintzen syndrome (ISO)

idiopathic generalized epilepsy (ISO)

immunodeficiency 16 (ISO)

immunodeficiency 38 (ISO)

Joubert syndrome 25 (ISO)

Neurodevelopmental Disorders (ISO)

Peroxisome Biogenesis Disorder, Complementation Group 7 (ISO)

Shprintzen-Goldberg Craniosynostosis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (EXP)

17alpha-ethynylestradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

aflatoxin B1 (EXP)

all-trans-retinoic acid (ISO)

arsenite(3-) (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

bisphenol A (ISO)

cadmium dichloride (ISO)

chloropicrin (ISO)

chlorpyrifos (EXP)

clofibrate (EXP)

cyclosporin A (EXP)

dibutyl phthalate (EXP)

diclofenac (EXP)

dimethyl sulfoxide (ISO)

doxorubicin (ISO)

ethanol (EXP)

folic acid (EXP)

fulvestrant (ISO)

hydralazine (ISO)

ibuprofen (EXP)

ozone (ISO)

paracetamol (EXP)

sodium arsenite (EXP,ISO)

sodium fluoride (EXP)

titanium dioxide (EXP)

triphenyl phosphate (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mitochondrial translation (NAS)

positive regulation of proteolysis (IBA,ISO)

protein ubiquitination (ISS)

Cellular Component

anaphase-promoting complex (ISS)

intracellular membrane-bounded organelle (ISO)

mitochondrial inner membrane (NAS)

mitochondrial matrix (ISO,ISS)

mitochondrial small ribosomal subunit (NAS)

mitochondrion (HDA,IBA,ISO)

nucleoplasm (IEA,ISO)

nucleus (ISO)

Molecular Function

molecular_function (ND)

protein binding (ISO)

ubiquitin-protein transferase activity (ISS)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

embryonic lethality prior to organogenesis (IEA)

preweaning lethality, complete penetrance (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:7671812	PMID:8889548	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11217851	PMID:11555487	PMID:12244051	PMID:12466851	PMID:12477932	PMID:14610273
PMID:14681479	PMID:15782199	PMID:16141072	PMID:16141073	PMID:17125467	PMID:18614015	PMID:18799693	PMID:21267068	PMID:21873635	PMID:25838379	PMID:27023846	PMID:33554859
PMID:38355793

Genomics

Comparative Map Data

Aurkaip1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	155,915,709 - 155,917,555 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	155,915,729 - 155,917,587 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	155,831,269 - 155,833,098 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	155,831,272 - 155,833,130 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	155,205,755 - 155,207,168 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	154,675,446 - 154,676,859 (+)	NCBI		MGSCv36	mm8
Celera	4	158,102,482 - 158,103,895 (+)	NCBI		Celera
Cytogenetic Map	4	E2	NCBI
cM Map	4	87.55	NCBI

AURKAIP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	1,373,736 - 1,375,207 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	1,373,730 - 1,375,207 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	1,309,116 - 1,310,587 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	1,298,973 - 1,300,443 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	1,271,320 - 1,273,028 (+)	NCBI		Celera
Cytogenetic Map	1	p36.33	NCBI
HuRef	1	581,461 - 583,169 (-)	NCBI		HuRef
CHM1_1	1	1,296,136 - 1,297,844 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	804,285 - 805,756 (-)	NCBI		T2T-CHM13v2.0

Aurkaip1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955486	9,437,958 - 9,438,857 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955486	9,437,511 - 9,438,945 (+)	NCBI	ChiLan1.0	ChiLan1.0

AURKAIP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	226,850,541 - 226,852,331 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	225,548,052 - 225,549,858 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	129,234 - 130,866 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	1,329,414 - 1,331,225 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	1,329,414 - 1,331,203 (-)	Ensembl	panpan1.1		panPan2

AURKAIP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	56,539,987 - 56,541,578 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	56,539,991 - 56,541,388 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	56,616,167 - 56,617,768 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	56,742,074 - 56,743,675 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	56,742,078 - 56,743,475 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	56,732,793 - 56,734,394 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	56,625,059 - 56,626,660 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	57,015,342 - 57,016,943 (-)	NCBI		UU_Cfam_GSD_1.0

Aurkaip1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	27,687,717 - 27,689,414 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936737	1,776,480 - 1,779,611 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936737	1,776,550 - 1,778,233 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AURKAIP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	63,656,119 - 63,657,472 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	63,656,120 - 63,657,568 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

AURKAIP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	130,074,660 - 130,076,355 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	130,075,295 - 130,076,765 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666054	34,631,140 - 34,632,908 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Aurkaip1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624818	8,246,646 - 8,248,005 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624818	8,246,636 - 8,248,002 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Aurkaip1
141 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	949
Count of miRNA genes:	416
Interacting mature miRNAs:	495
Transcripts:	ENSMUST00000084097, ENSMUST00000105591, ENSMUST00000105592, ENSMUST00000129711, ENSMUST00000139651, ENSMUST00000151222
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
11567249	Elorr3_m	ethanol induced loss of righting response 3 (mouse)					4	3722677	156268235	Mouse
4142077	Ignpq2_m	IgA nephropathy QTL 2 (mouse)			Not determined		4	133676733	156860686	Mouse
4142139	Adip12_m	adiposity 12 (mouse)			Not determined		4	124621281	156860686	Mouse
10043996	Gct5_m	granulosa cell tumorigenesis 5 (mouse)			Not determined		4	127784226	156860686	Mouse
1301108	Scon2_m	sucrose consumption 2 (mouse)			Not determined		4	134654451	156860686	Mouse
1300858	Tafat_m	tally ho associated mesenteric fat pad weight (mouse)			Not determined		4	124621281	156860686	Mouse
1300537	Ap3q_m	alcohol preference 3 QTL (mouse)			Not determined		4	134654451	156860686	Mouse
1301982	Pltiq1_m	phospholipid transfer protein inducibility QTL 1 (mouse)			Not determined		4	124621281	156860686	Mouse
10045620	Heal22_m	wound healing/regeneration 22 (mouse)			Not determined		4	125230872	156860686	Mouse
4142481	Gct1_m	granulosa cell tumorigenesis 1 (mouse)			Not determined		4	127784226	156860686	Mouse
10755531	Lymph3_m	lymphocyte differential 3 (mouse)					4	124553483	156860686	Mouse
11533916	Mts1_m	mammary tumor susceptibility 1 (mouse)					4	125289325	156860686	Mouse
1300933	Cdcs9_m	cytokine deficiency colitis susceptibility 9 (mouse)			Not determined		4	125230872	156860686	Mouse
1300874	Gasa2_m	gastritis type A susceptibility locus 2 (mouse)			Not determined		4	133010494	156860686	Mouse
1300621	Tpnr1_m	thermal pain response 1 (mouse)			Not determined		4	125230872	156860686	Mouse
1300780	Cocrb16_m	cocaine related behavior 16 (mouse)			Not determined		4	138943725	156860686	Mouse

Markers in Region

UniSTS:235120

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	4	155,832,899 - 155,833,010	UniSTS	GRCm38
MGSCv37	4	155,207,008 - 155,207,119	UniSTS	GRCm37
Celera	4	158,103,734 - 158,103,845	UniSTS
Cytogenetic Map	4	E2	UniSTS
cM Map	4	83.0	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_025338	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006539095	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036164304	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AK002737	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK003442	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK033452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK144719	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK158165	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK166049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK179966	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK208653	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK214208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL670236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC011245	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466594	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CX233396	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000084097 ⟹ ENSMUSP00000081114

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	4	155,915,808 - 155,917,587 (+)	Ensembl
GRCm38.p6 Ensembl	4	155,831,351 - 155,833,130 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000105591 ⟹ ENSMUSP00000101216

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	4	155,916,126 - 155,917,488 (+)	Ensembl
GRCm38.p6 Ensembl	4	155,831,669 - 155,833,031 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000105592 ⟹ ENSMUSP00000101217

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	4	155,916,116 - 155,917,518 (+)	Ensembl
GRCm38.p6 Ensembl	4	155,831,659 - 155,833,061 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000129711

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	4	155,916,122 - 155,916,986 (+)	Ensembl
GRCm38.p6 Ensembl	4	155,831,665 - 155,832,529 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000139651 ⟹ ENSMUSP00000117870

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	4	155,915,729 - 155,917,196 (+)	Ensembl
GRCm38.p6 Ensembl	4	155,831,272 - 155,832,739 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000151222

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	4	155,916,076 - 155,916,922 (+)	Ensembl
GRCm38.p6 Ensembl	4	155,831,619 - 155,832,465 (+)	Ensembl

RefSeq Acc Id:

NM_025338 ⟹ NP_079614

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	4	155,915,726 - 155,917,555 (+)	NCBI
GRCm38	4	155,831,269 - 155,833,098 (+)	ENTREZGENE
MGSCv37	4	155,205,755 - 155,207,168 (+)	RGD
Celera	4	158,102,111 - 158,103,934 (+)	ENTREZGENE
cM Map	4		ENTREZGENE

Sequence:

show sequence

GCCTATCCCACAGGACTATTAAACGACCTGCCGCCCTAACAGGAGGAGCGCCACTTGTCACTTC
CGCAGTCCTACGGTCCATGGCGGTACCCGGAGGCTAACCGGCTTGGGAGAGACGAAAGGAAAAA
AATATATATATATATACTGTAAAGTCCGCGTGCACGCAGAGAGCACTCTCCGGGATTGTGGTGG
GTGTCGGGTGTGGGCACTTTTTACCCGGAACGTTGTTGCTGCTGGACAACAGCGGCAGGGGAAG
CGTCCCCTCCAACCGGAAGCGATCGCCTTCGGGCACGCAAGGATCGAGTTAGCGCAGAGCCGGG
CACCAGAGGGCGCTGCGTAGGACCAGGGACCGGAAGTGGTCGAGGTCAGAGGCGACCTGATCGG
TCCTAACTTCCGGGATTCGGTGGGCCTGTTGCGGGGCTCAGATGATGAGCGGCGGCGGAGCTCG
CTTGGCCTGCGTCTGTTTGCTTTGAGCGCTGCCGCCGGACCAACTGCTCACCATGTTCCTGGCG
CGCCTGACTTCACGGCTGGCCAGGACTGTTGTTCCCTGGGCAGGTTTCAGTCGTTCCTGCCCTG
GCTCCGGGGTGATTGGCAGCTATGCTTTTCGACCCCTTTACAGTTTGCAGCCTGCAAGCCCAAG
TCGGGCTGCCTCCCTCCCTGGTAAGAGGACCCAGTCAGAGCTTGAGGAGTTCCTGGTCCCCAGG
AAGATGGCCATCAGTCCTCTAGAGAGCTGGCTGACTGCTCAATACTTATTGCCCAGACGGAATG
TCGAGGTCCCAGTGACTCTGGCTCCCTCCCAGTTCTACGAATGTCCACCTAGGCAGGGGGAGGA
GGAAGCCCAGCAGGGAGTCAGGGAAGCCTGGGATGCCACTCCAGTGCAGTGCAAAAACGTGCTG
AAGATCCGAAGGCGAAAGATGAACCACCACAAGTACCGTAAACTGGTCAAAAGGACCCGGTTTC
TACGTCGCAAGGTCCGGGAAGGACGTTTGAAGAAGAAGCAGATCAAATTTGAGAAAGACTTGAA
GCGCATCTGGCTTAAGGCAGGCCTGAAGGAAGCCCCTGAGAACTGGCAGACCCCGAAGATCTAC
CTGAAGAACAAATAATCTGGGTTCCTGTCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAA
TAAATATTGGAAGGACTCAATTATTCTAGGCCGACCTAGAGTTTCTTTGGCTTGGTG

hide sequence

RefSeq Acc Id:

XM_006539095 ⟹ XP_006539158

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	4	155,915,709 - 155,917,526 (+)	NCBI
GRCm38	4	155,831,305 - 155,833,069 (+)	NCBI

Sequence:

show sequence

GCCCCATTCTGCAGCCAGCCTATCCCACAGGACTATTAAACGACCTGCCGCCCTAACAGGAGGA
GCGCCACTTGTCACTTCCGCAGTCCTACGGTCCATGGCGGTACCCGGAGGCTAACCGGCTTGGG
AGAGACGAAAGGAAAAAAATATATATATATATACTGTAAAGTCCGCGTGCACGCAGAGAGCACT
CTCCGGGATTGTGGTGGGTGTCGGGTGTGGGCACTTTTTACCCGGAACGTTGTTGCTGCTGGAC
AACAGCGGCAGGGGAAGCGTCCCCTCCAACCGGAAGCGATCGCCTTCGGGCACGCAAGGATCGA
GTTAGCGCAGAGCCGGGCACCAGAGGGCGCTGCGTAGGACCAGGGACCGGAAGTGGTCGAGGTC
AGAGGCGACCTGATCGGTCCTAACTTCCGGGATTCGGTGGGCCTGTTGCGGGGCTCAGATGATG
AGCGGCGGCGGAGCTCGCTTGGCCTGCGTCTGTTTGGTGCGTGCGAGCGTCGATATCGTCCTGC
GCTCTTTGAGCGCTGCCGCCGGACCAACTGCTCACCATGTTCCTGGCGCGCCTGACTTCACGGC
TGGCCAGGACTGTTGTTCCCTGGGCAGGTTTCAGTCGTTCCTGCCCTGGCTCCGGGGTGATTGG
CAGCTATGCTTTTCGACCCCTTTACAGTTTGCAGCCTGCAAGCCCAAGTCGGGCTGCCTCCCTC
CCTGGTAAGAGGACCCAGTCAGAGCTTGAGGAGTTCCTGGTCCCCAGGAAGATGGCCATCAGTC
CTCTAGAGAGCTGGCTGACTGCTCAATACTTATTGCCCAGACGGAATGTCGAGGTCCCAGTGAC
TCTGGCTCCCTCCCAGTTCTACGAATGTCCACCTAGGCAGGGGGAGGAGGAAGCCCAGCAGGGA
GTCAGGGAAGCCTGGGATGCCACTCCAGTGCAGTGCAAAAACGTGCTGAAGATCCGAAGGCGAA
AGATGAACCACCACAAGTACCGTAAACTGGTCAAAAGGACCCGGTTTCTACGTCGCAAGGTCCG
GGAAGGACGTTTGAAGAAGAAGCAGATCAAATTTGAGAAAGACTTGAAGCGCATCTGGCTTAAG
GCAGGCCTGAAGGAAGCCCCTGAGAACTGGCAGACCCCGAAGATCTACCTGAAGAACAAATAAT
CTGGGTTCCTGTCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAGGAC
TCAATTATTCTA

hide sequence

RefSeq Acc Id:

XM_036164304 ⟹ XP_036020197

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	4	155,915,762 - 155,917,526 (+)	NCBI

Sequence:

show sequence

TAACAGGAGGAGCGCCACTTGTCACTTCCGCAGTCCTACGGTCCATGGCGGTACCCGGAGGCTA
ACCGGCTTGGGAGAGACGAAAGGAAAAAAATATATATATATATACTGTAAAGTCCGCGTGCACG
CAGAGAGCACTCTCCGGGATTGTGGTGGGTGTCGGGTGTGGGCACTTTTTACCCGGAACGTTGT
TGCTGCTGGACAACAGCGGCAGGGGAAGCGTCCCCTCCAACCGGAAGCGATCGCCTTCGGGCAC
GCAAGGATCGAGTTAGCGCAGAGCCGGGCACCAGAGGGCGCTGCGTAGGACCAGGGACCGGAAG
TGGTCGAGGTCAGAGGCGACCTGATCGGTCCTAACTTCCGGGATTCGGTGGGCCTGTTGCGGGG
CTCAGATGATGAGCGGCGGCGGAGCTCGCTTGGCCTGCGTCTGTTTGGGGGACCCAGGGTGATG
GGATATGCGAGGCCTGCGGCCGAGAGCACTGCCCGTCGCCGCTGCGTGACCTCAGCTGGTTCCT
GTGTTCTAGCTTTGAGCGCTGCCGCCGGACCAACTGCTCACCATGTTCCTGGCGCGCCTGACTT
CACGGCTGGCCAGGACTGTTGTTCCCTGGGCAGGTTTCAGTCGTTCCTGCCCTGGCTCCGGGGT
GATTGGCAGCTATGCTTTTCGACCCCTTTACAGTTTGCAGCCTGCAAGCCCAAGTCGGGCTGCC
TCCCTCCCTGGTAAGAGGACCCAGTCAGAGCTTGAGGAGTTCCTGGTCCCCAGGAAGATGGCCA
TCAGTCCTCTAGAGAGCTGGCTGACTGCTCAATACTTATTGCCCAGACGGAATGTCGAGGTCCC
AGTGACTCTGGCTCCCTCCCAGTTCTACGAATGTCCACCTAGGCAGGGGGAGGAGGAAGCCCAG
CAGGGAGTCAGGGAAGCCTGGGATGCCACTCCAGTGCAGTGCAAAAACGTGCTGAAGATCCGAA
GGCGAAAGATGAACCACCACAAGTACCGTAAACTGGTCAAAAGGACCCGGTTTCTACGTCGCAA
GGTCCGGGAAGGACGTTTGAAGAAGAAGCAGATCAAATTTGAGAAAGACTTGAAGCGCATCTGG
CTTAAGGCAGGCCTGAAGGAAGCCCCTGAGAACTGGCAGACCCCGAAGATCTACCTGAAGAACA
AATAATCTGGGTTCCTGTCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGG
AAGGACTCAATTATTCTA

hide sequence

Protein Sequences


Protein RefSeqs	NP_079614	(Get FASTA)	NCBI Sequence Viewer
	XP_006539158	(Get FASTA)	NCBI Sequence Viewer
	XP_036020197	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH11245	(Get FASTA)	NCBI Sequence Viewer
	BAB22317	(Get FASTA)	NCBI Sequence Viewer
	BAB22792	(Get FASTA)	NCBI Sequence Viewer
	BAC28297	(Get FASTA)	NCBI Sequence Viewer
	BAE26030	(Get FASTA)	NCBI Sequence Viewer
	BAE34389	(Get FASTA)	NCBI Sequence Viewer
	BAE38543	(Get FASTA)	NCBI Sequence Viewer
	EDL15041	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000081114
	ENSMUSP00000081114.6
	ENSMUSP00000101216
	ENSMUSP00000101216.2
	ENSMUSP00000101217
	ENSMUSP00000101217.2
	ENSMUSP00000117870.2
GenBank Protein	Q9DCJ7	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_079614 ⟸ NM_025338
- UniProtKB:	Q9DCJ7 (UniProtKB/Swiss-Prot), Q9D1J7 (UniProtKB/Swiss-Prot), Q3TZ21 (UniProtKB/TrEMBL), Q8CCC0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFLARLTSRLARTVVPWAGFSRSCPGSGVIGSYAFRPLYSLQPASPSRAASLPGKRTQSELEEF LVPRKMAISPLESWLTAQYLLPRRNVEVPVTLAPSQFYECPPRQGEEEAQQGVREAWDATPVQC KNVLKIRRRKMNHHKYRKLVKRTRFLRRKVREGRLKKKQIKFEKDLKRIWLKAGLKEAPENWQT PKIYLKNK hide sequence

RefSeq Acc Id:	XP_006539158 ⟸ XM_006539095
- Peptide Label:	isoform X1
- UniProtKB:	Q9DCJ7 (UniProtKB/Swiss-Prot), Q9D1J7 (UniProtKB/Swiss-Prot), Q3TZ21 (UniProtKB/TrEMBL), Q8CCC0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFLARLTSRLARTVVPWAGFSRSCPGSGVIGSYAFRPLYSLQPASPSRAASLPGKRTQSELEEF LVPRKMAISPLESWLTAQYLLPRRNVEVPVTLAPSQFYECPPRQGEEEAQQGVREAWDATPVQC KNVLKIRRRKMNHHKYRKLVKRTRFLRRKVREGRLKKKQIKFEKDLKRIWLKAGLKEAPENWQT PKIYLKNK hide sequence

Ensembl Acc Id:

ENSMUSP00000117870 ⟸ ENSMUST00000139651

Ensembl Acc Id:

ENSMUSP00000101216 ⟸ ENSMUST00000105591

Ensembl Acc Id:

ENSMUSP00000101217 ⟸ ENSMUST00000105592

Ensembl Acc Id:

ENSMUSP00000081114 ⟸ ENSMUST00000084097

RefSeq Acc Id:	XP_036020197 ⟸ XM_036164304
- Peptide Label:	isoform X1
- UniProtKB:	Q9DCJ7 (UniProtKB/Swiss-Prot), Q9D1J7 (UniProtKB/Swiss-Prot), Q3TZ21 (UniProtKB/TrEMBL), Q8CCC0 (UniProtKB/TrEMBL)

Protein Domains

Ribosomal protein mS38 C-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9DCJ7-F1-model_v2	AlphaFold	Q9DCJ7	1-200	view protein structure

Promoters

RGD ID:

6834924

Promoter ID:

MM_KWN:41189

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

ENSMUST00000105591, ENSMUST00000105592, OTTMUST00000025540, OTTMUST00000025542, OTTMUST00000025543, OTTMUST00000025544

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	4	155,204,606 - 155,205,872 (+)	MPROMDB

RGD ID:

6885822

Promoter ID:

EPDNEW_M6362

Type:

multiple initiation site

Name:

Aurkaip1_1

Description:

Mus musculus aurora kinase A interacting protein 1 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M6363

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	4	155,831,334 - 155,831,394	EPDNEW

RGD ID:

6885824

Promoter ID:

EPDNEW_M6363

Type:

initiation region

Name:

Aurkaip1_2

Description:

Mus musculus aurora kinase A interacting protein 1 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M6362

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	4	155,831,658 - 155,831,718	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1913327	AgrOrtholog
Ensembl Genes	ENSMUSG00000065990	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000084097	ENTREZGENE
	ENSMUST00000084097.12	UniProtKB/Swiss-Prot
	ENSMUST00000105591	ENTREZGENE
	ENSMUST00000105591.2	UniProtKB/Swiss-Prot
	ENSMUST00000105592	ENTREZGENE
	ENSMUST00000105592.8	UniProtKB/Swiss-Prot
	ENSMUST00000139651.8	UniProtKB/TrEMBL
InterPro	DUF1713	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:66077	UniProtKB/Swiss-Prot
MGD	MGI:1913327	ENTREZGENE
NCBI Gene	66077	ENTREZGENE
PANTHER	AURORA KINASE A-INTERACTING PROTEIN	UniProtKB/Swiss-Prot
	AURORA KINASE A-INTERACTING PROTEIN	UniProtKB/Swiss-Prot
	AURORA KINASE A-INTERACTING PROTEIN	UniProtKB/TrEMBL
	AURORA KINASE A-INTERACTING PROTEIN	UniProtKB/TrEMBL
Pfam	DUF1713	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Aurkaip1	PhenoGen
SMART	DUF1713	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A0A0MQH8_MOUSE	UniProtKB/TrEMBL
	AKIP_MOUSE	UniProtKB/Swiss-Prot
	Q3TZ21	ENTREZGENE, UniProtKB/TrEMBL
	Q8CCC0	ENTREZGENE, UniProtKB/TrEMBL
	Q91X73_MOUSE	UniProtKB/TrEMBL
	Q9D1J7	ENTREZGENE
	Q9DCJ7	ENTREZGENE
UniProt Secondary	Q9D1J7	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Mammalian Phenotype