Aurkaip1 (aurora kinase A interacting protein 1) - Rat Genome Database

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Gene: Aurkaip1 (aurora kinase A interacting protein 1) Chinchilla lanigera
Analyze
Symbol: Aurkaip1
Name: aurora kinase A interacting protein 1
RGD ID: 8805946
Description: INVOLVED IN positive regulation of proteolysis (ortholog); ASSOCIATED WITH chromosome 1p36 deletion syndrome (ortholog); congenital myasthenic syndrome 8 (ortholog); dilated cardiomyopathy 1LL (ortholog); FOUND IN intracellular membrane-bounded organelle (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554869,437,958 - 9,438,857 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554869,437,511 - 9,438,945 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Aurkaip1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554869,437,958 - 9,438,857 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554869,437,511 - 9,438,945 (+)NCBIChiLan1.0ChiLan1.0
AURKAIP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811,373,736 - 1,375,207 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11,373,730 - 1,375,207 (-)EnsemblGRCh38hg38GRCh38
GRCh3711,309,116 - 1,310,587 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611,298,973 - 1,300,443 (-)NCBINCBI36Build 36hg18NCBI36
Celera11,271,320 - 1,273,028 (+)NCBICelera
Cytogenetic Map1p36.33NCBI
HuRef1581,461 - 583,169 (-)NCBIHuRef
CHM1_111,296,136 - 1,297,844 (-)NCBICHM1_1
T2T-CHM13v2.01804,285 - 805,756 (-)NCBIT2T-CHM13v2.0
Aurkaip1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394155,915,709 - 155,917,555 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4155,915,729 - 155,917,587 (+)EnsemblGRCm39 Ensembl
GRCm384155,831,269 - 155,833,098 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4155,831,272 - 155,833,130 (+)EnsemblGRCm38mm10GRCm38
MGSCv374155,205,755 - 155,207,168 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364154,675,446 - 154,676,859 (+)NCBIMGSCv36mm8
Celera4158,102,482 - 158,103,895 (+)NCBICelera
Cytogenetic Map4E2NCBI
cM Map487.55NCBI
AURKAIP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21226,850,541 - 226,852,331 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11225,548,052 - 225,549,858 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01129,234 - 130,866 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111,329,414 - 1,331,225 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11,329,414 - 1,331,203 (-)Ensemblpanpan1.1panPan2
AURKAIP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1556,539,987 - 56,541,578 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl556,539,991 - 56,541,388 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha556,616,167 - 56,617,768 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0556,742,074 - 56,743,675 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl556,742,078 - 56,743,475 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1556,732,793 - 56,734,394 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0556,625,059 - 56,626,660 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0557,015,342 - 57,016,943 (-)NCBIUU_Cfam_GSD_1.0
Aurkaip1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505827,687,717 - 27,689,414 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367371,776,480 - 1,779,611 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367371,776,550 - 1,778,233 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AURKAIP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl663,656,119 - 63,657,472 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1663,656,120 - 63,657,568 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
AURKAIP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120130,074,660 - 130,076,355 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20130,075,295 - 130,076,765 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605434,631,140 - 34,632,908 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Aurkaip1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248188,246,646 - 8,248,005 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248188,246,636 - 8,248,002 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000023200   ⟹   ENSCLAP00000022984
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554869,437,958 - 9,438,857 (+)Ensembl
RefSeq Acc Id: XM_005404225   ⟹   XP_005404282
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554869,437,770 - 9,438,945 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005404226   ⟹   XP_005404283
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554869,437,511 - 9,438,945 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005404227   ⟹   XP_005404284
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554869,437,583 - 9,438,945 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005404228   ⟹   XP_005404285
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554869,437,583 - 9,438,945 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005404282 (Get FASTA)   NCBI Sequence Viewer  
  XP_005404283 (Get FASTA)   NCBI Sequence Viewer  
  XP_005404284 (Get FASTA)   NCBI Sequence Viewer  
  XP_005404285 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000022984
  ENSCLAP00000022984.1
RefSeq Acc Id: XP_005404283   ⟸   XM_005404226
- UniProtKB: A0A8C2VZM2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005404282   ⟸   XM_005404225
- UniProtKB: A0A8C2VZM2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005404284   ⟸   XM_005404227
- UniProtKB: A0A8C2VZM2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005404285   ⟸   XM_005404228
- UniProtKB: A0A8C2VZM2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000022984   ⟸   ENSCLAT00000023200

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000015774 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000023200 ENTREZGENE
  ENSCLAT00000023200.1 UniProtKB/TrEMBL
InterPro COX24_C UniProtKB/TrEMBL
NCBI Gene Aurkaip1 ENTREZGENE
PANTHER AURORA KINASE A-INTERACTING PROTEIN UniProtKB/TrEMBL
  AURORA KINASE A-INTERACTING PROTEIN UniProtKB/TrEMBL
Pfam DUF1713 UniProtKB/TrEMBL
PROSITE PROKAR_LIPOPROTEIN UniProtKB/TrEMBL
SMART DUF1713 UniProtKB/TrEMBL
UniProt A0A8C2VZM2 ENTREZGENE, UniProtKB/TrEMBL