Kcnab2 (potassium voltage-gated channel, shaker-related subfamily, beta member 2) - Rat Genome Database

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Gene: Kcnab2 (potassium voltage-gated channel, shaker-related subfamily, beta member 2) Mus musculus
Analyze
Symbol: Kcnab2
Name: potassium voltage-gated channel, shaker-related subfamily, beta member 2
RGD ID: 62119
MGI Page MGI
Description: Predicted to enable aldo-keto reductase (NADP) activity; potassium channel regulator activity; and transmembrane transporter binding activity. Involved in neuromuscular process. Acts upstream of or within hematopoietic progenitor cell differentiation. Located in axon terminus; juxtaparanode region of axon; and postsynaptic density. Is active in axon initial segment. Is expressed in several structures, including central nervous system; genitourinary system; hemolymphoid system; intestine; and sensory organ. Used to study chromosome 1p36 deletion syndrome. Orthologous to human KCNAB2 (potassium voltage-gated channel subfamily A regulatory beta subunit 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: F5; I2r; I2rf5; K(+) channel subunit beta-2; Kcnb; Kcnb3; kv-beta-2; neuroimmune protein F5; potassium voltage gated channel, shaker related subfamily, beta member 2; voltage-gated potassium channel subunit beta-2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394152,475,201 - 152,561,991 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4152,475,199 - 152,562,367 (-)EnsemblGRCm39 Ensembl
GRCm384152,390,744 - 152,477,549 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4152,390,742 - 152,477,910 (-)EnsemblGRCm38mm10GRCm38
MGSCv374151,764,853 - 151,851,588 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364151,234,544 - 151,321,279 (-)NCBIMGSCv36mm8
Celera4154,677,910 - 154,763,618 (-)NCBICelera
Cytogenetic Map4E2NCBI
cM Map483.08NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
1-O-palmitoyl-2-O-(5-oxovaleryl)-sn-glycero-3-phosphocholine  (ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-sulfonyldiphenol  (EXP,ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
amphetamine  (ISO)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[e]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
buta-1,3-diene  (EXP)
cadmium dichloride  (ISO)
caffeine  (ISO)
calciol  (EXP)
carmustine  (ISO)
choline  (EXP)
cisplatin  (ISO)
Cuprizon  (ISO)
dioxygen  (EXP)
doxorubicin  (ISO)
epoxiconazole  (EXP)
etoposide  (ISO)
folic acid  (EXP)
fulvestrant  (ISO)
gentamycin  (ISO)
L-methionine  (EXP)
methapyrilene  (ISO)
methoxychlor  (ISO)
methyl methanesulfonate  (ISO)
mitoxantrone  (ISO)
N,N-diethyl-m-toluamide  (ISO)
NADP zwitterion  (ISO)
NADP(+)  (ISO)
nickel atom  (ISO)
ozone  (EXP)
paracetamol  (ISO)
PCB138  (EXP)
permethrin  (ISO)
silicon dioxide  (EXP,ISO)
sodium arsenite  (ISO)
sulforaphane  (ISO)
tamibarotene  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (EXP)
tetrachloromethane  (ISO)
thioacetamide  (ISO)
trichloroethene  (ISO)
triclosan  (ISO)
triptonide  (EXP)
trovafloxacin  (EXP)
tungsten  (EXP)
urethane  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Mouse MP Annotation Import Pipeline RGD automated import pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1484386   PMID:1573677   PMID:7774930   PMID:8576199   PMID:8672149   PMID:8824288   PMID:8889548   PMID:10341097   PMID:10349636   PMID:10501973   PMID:10536234   PMID:11042159  
PMID:11076861   PMID:11217851   PMID:11825900   PMID:12466851   PMID:12477932   PMID:12963709   PMID:15489334   PMID:15662035   PMID:15720404   PMID:15782199   PMID:16141072   PMID:16141073  
PMID:16602821   PMID:16959763   PMID:16985003   PMID:18509034   PMID:18614564   PMID:21106837   PMID:21209188   PMID:21267068   PMID:21357749   PMID:21677750   PMID:21873635   PMID:22794259  
PMID:24029230   PMID:24036102   PMID:24211303   PMID:25707359   PMID:26370502   PMID:27507650   PMID:28671696   PMID:28706196   PMID:29518331   PMID:29704886   PMID:30333137   PMID:31639389  
PMID:32325033   PMID:32581705   PMID:33499656   PMID:35788155   PMID:36417873   PMID:36604605   PMID:36808153  


Genomics

Comparative Map Data
Kcnab2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394152,475,201 - 152,561,991 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4152,475,199 - 152,562,367 (-)EnsemblGRCm39 Ensembl
GRCm384152,390,744 - 152,477,549 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4152,390,742 - 152,477,910 (-)EnsemblGRCm38mm10GRCm38
MGSCv374151,764,853 - 151,851,588 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364151,234,544 - 151,321,279 (-)NCBIMGSCv36mm8
Celera4154,677,910 - 154,763,618 (-)NCBICelera
Cytogenetic Map4E2NCBI
cM Map483.08NCBI
KCNAB2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3815,992,676 - 6,101,180 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl15,990,927 - 6,101,193 (+)EnsemblGRCh38hg38GRCh38
GRCh3716,052,736 - 6,161,240 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3616,008,967 - 6,083,110 (+)NCBINCBI36Build 36hg18NCBI36
Build 3416,020,645 - 6,094,789NCBI
Celera15,201,212 - 5,275,339 (+)NCBICelera
Cytogenetic Map1p36.31NCBI
HuRef15,201,765 - 5,310,071 (+)NCBIHuRef
CHM1_116,041,041 - 6,149,632 (+)NCBICHM1_1
T2T-CHM13v2.015,518,502 - 5,626,866 (+)NCBIT2T-CHM13v2.0
Kcnab2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85168,182,228 - 168,270,760 (-)NCBIGRCr8
mRatBN7.25162,899,511 - 162,988,057 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5162,901,896 - 162,988,243 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5165,605,037 - 165,691,160 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05167,426,639 - 167,512,761 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05167,388,842 - 167,474,968 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05169,570,327 - 169,658,875 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5169,572,517 - 169,658,875 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05173,123,990 - 173,212,638 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45169,624,099 - 169,710,725 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15169,634,286 - 169,720,913 (-)NCBI
Celera5161,132,556 - 161,217,754 (-)NCBICelera
RH 3.4 Map51140.7RGD
Cytogenetic Map5q36NCBI
Kcnab2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554866,369,288 - 6,442,885 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554866,371,212 - 6,442,888 (-)NCBIChiLan1.0ChiLan1.0
KCNAB2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21222,123,611 - 222,235,524 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11220,764,655 - 220,877,249 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v014,755,412 - 4,866,424 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.116,012,647 - 6,120,438 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl16,013,072 - 6,120,438 (+)Ensemblpanpan1.1panPan2
KCNAB2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1559,936,432 - 60,021,945 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl559,936,528 - 60,021,957 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha559,947,614 - 60,032,655 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0560,152,884 - 60,238,334 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl560,152,939 - 60,237,934 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1560,152,983 - 60,238,041 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0560,019,378 - 60,104,720 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0560,420,808 - 60,506,161 (+)NCBIUU_Cfam_GSD_1.0
Kcnab2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505830,463,300 - 30,502,711 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936623940,678 - 985,388 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936623972,288 - 987,949 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCNAB2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl666,928,381 - 67,016,845 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1666,928,374 - 67,016,846 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2661,880,875 - 61,923,103 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KCNAB2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120125,636,352 - 125,743,821 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20125,638,962 - 125,708,768 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605429,784,200 - 29,893,813 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kcnab2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248185,253,773 - 5,327,000 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248185,251,304 - 5,326,796 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Kcnab2
3709 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:5132
Count of miRNA genes:826
Interacting mature miRNAs:1113
Transcripts:ENSMUST00000030768, ENSMUST00000105648, ENSMUST00000159186, ENSMUST00000159435, ENSMUST00000159840, ENSMUST00000159844, ENSMUST00000160884, ENSMUST00000161236, ENSMUST00000161496, ENSMUST00000161844, ENSMUST00000162017, ENSMUST00000162165, ENSMUST00000162200, ENSMUST00000162518
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
26884437Sklq13_mskull length QTL 13, 16 week (mouse)457700000155684457Mouse
1302102Bis1_mbeta-carboline-induced seizures 1 (mouse)Not determined4119864433153864536Mouse
1301964Bw8q2_mbody weight at 8 weeks QTL 2 (mouse)Not determined4119864433153864536Mouse
13503348Bntq18_mbone traits QTL 18 (mouse)4120617848154617995Mouse
10412210Cypr6_mcytokine production 6 (mouse)Not determined4120617848154617995Mouse
4141180Ssic1_msusceptibility to small intestinal cancer 1 (mouse)Not determined120674005154674151Mouse
1300803Sluc6_msusceptibility to lung cancer 6 (mouse)Not determined4120674005154674151Mouse
10043985Stheal12_msoft tissue heal 12 (mouse)Not determined4121342649155342753Mouse
4142061Chlq16_mcirculating hormone level QTL 16 (mouse)Not determined4121342649155342753Mouse
1301452Elsgp1_melevated serum gp70 1 (mouse)Not determined4121342649155342753Mouse
10755531Lymph3_mlymphocyte differential 3 (mouse)4124553483156860686Mouse
1300858Tafat_mtally ho associated mesenteric fat pad weight (mouse)Not determined4124621281156860686Mouse
4142139Adip12_madiposity 12 (mouse)Not determined4124621281156860686Mouse
1301982Pltiq1_mphospholipid transfer protein inducibility QTL 1 (mouse)Not determined4124621281156860686Mouse
1300933Cdcs9_mcytokine deficiency colitis susceptibility 9 (mouse)Not determined4125230872156860686Mouse
1300621Tpnr1_mthermal pain response 1 (mouse)Not determined4125230872156860686Mouse
10045620Heal22_mwound healing/regeneration 22 (mouse)Not determined4125230872156860686Mouse
11533916Mts1_mmammary tumor susceptibility 1 (mouse)4125289325156860686Mouse
10043996Gct5_mgranulosa cell tumorigenesis 5 (mouse)Not determined4127784226156860686Mouse
4142481Gct1_mgranulosa cell tumorigenesis 1 (mouse)Not determined4127784226156860686Mouse
1300874Gasa2_mgastritis type A susceptibility locus 2 (mouse)Not determined4133010494156860686Mouse
4142077Ignpq2_mIgA nephropathy QTL 2 (mouse)Not determined4133676733156860686Mouse
1301108Scon2_msucrose consumption 2 (mouse)Not determined4134654451156860686Mouse
1300537Ap3q_malcohol preference 3 QTL (mouse)Not determined4134654451156860686Mouse
1300780Cocrb16_mcocaine related behavior 16 (mouse)Not determined4138943725156860686Mouse

Markers in Region
RH94672  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384152,477,573 - 152,477,756UniSTSGRCm38
MGSCv374151,851,682 - 151,851,865UniSTSGRCm37
Celera4154,763,712 - 154,763,895UniSTS
Cytogenetic Map4E2UniSTS
cM Map478.4UniSTS
D4Mit356  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384152,429,969 - 152,430,092UniSTSGRCm38
MGSCv374151,804,078 - 151,804,201UniSTSGRCm37
Celera4154,717,158 - 154,717,281UniSTS
Cytogenetic Map4E2UniSTS
cM Map481.0UniSTS
Whitehead Genetic476.5UniSTS
Whitehead/MRC_RH41960.04UniSTS
U31908  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384152,392,529 - 152,392,649UniSTSGRCm38
MGSCv374151,766,638 - 151,766,758UniSTSGRCm37
Celera4154,679,695 - 154,679,815UniSTS
Cytogenetic Map4E2UniSTS
cM Map478.4UniSTS
Whitehead/MRC_RH41969.35UniSTS
UniSTS:225032  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384152,391,614 - 152,391,795UniSTSGRCm38
MGSCv374151,765,723 - 151,765,904UniSTSGRCm37
Celera4154,678,780 - 154,678,961UniSTS
Cytogenetic Map4E2UniSTS
cM Map478.4UniSTS
Kcnab2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384152,392,948 - 152,393,075UniSTSGRCm38
MGSCv374151,767,057 - 151,767,184UniSTSGRCm37
Celera4154,680,114 - 154,680,241UniSTS
Cytogenetic Map4E2UniSTS
cM Map478.4UniSTS
Kcnab2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384152,390,794 - 152,391,648UniSTSGRCm38
MGSCv374151,764,903 - 151,765,757UniSTSGRCm37
Celera4154,677,960 - 154,678,814UniSTS
Cytogenetic Map4E2UniSTS
cM Map478.4UniSTS
RH138171  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384152,393,053 - 152,393,789UniSTSGRCm38
MGSCv374151,767,162 - 151,767,898UniSTSGRCm37
Celera4154,680,219 - 154,680,955UniSTS
Cytogenetic Map4E2UniSTS
cM Map478.4UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001252654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001421217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001421218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001421219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001421221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001421222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001421223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001421224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001421225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_010598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006538587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030253267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AI835117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK143166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK157053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL611985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC039178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC049986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY198829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY232563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK627448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CV784053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX224114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX768025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DN173203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L48983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U31908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U65592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000030768   ⟹   ENSMUSP00000030768
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4152,475,202 - 152,562,046 (-)Ensembl
GRCm38.p6 Ensembl4152,390,745 - 152,477,589 (-)Ensembl
RefSeq Acc Id: ENSMUST00000105648   ⟹   ENSMUSP00000101273
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4152,477,032 - 152,533,313 (-)Ensembl
GRCm38.p6 Ensembl4152,392,575 - 152,448,856 (-)Ensembl
RefSeq Acc Id: ENSMUST00000159186   ⟹   ENSMUSP00000124588
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4152,477,204 - 152,515,123 (-)Ensembl
GRCm38.p6 Ensembl4152,392,747 - 152,430,666 (-)Ensembl
RefSeq Acc Id: ENSMUST00000159435   ⟹   ENSMUSP00000158609
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4152,487,495 - 152,533,198 (-)Ensembl
GRCm38.p6 Ensembl4152,403,038 - 152,448,741 (-)Ensembl
RefSeq Acc Id: ENSMUST00000159488
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4152,502,740 - 152,506,291 (-)Ensembl
GRCm38.p6 Ensembl4152,418,283 - 152,421,834 (-)Ensembl
RefSeq Acc Id: ENSMUST00000159840   ⟹   ENSMUSP00000124156
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4152,475,199 - 152,533,297 (-)Ensembl
GRCm38.p6 Ensembl4152,390,742 - 152,448,840 (-)Ensembl
RefSeq Acc Id: ENSMUST00000159844
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4152,477,508 - 152,507,201 (-)Ensembl
GRCm38.p6 Ensembl4152,393,051 - 152,422,744 (-)Ensembl
RefSeq Acc Id: ENSMUST00000160884   ⟹   ENSMUSP00000125058
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4152,475,201 - 152,562,367 (-)Ensembl
GRCm38.p6 Ensembl4152,390,744 - 152,477,910 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161236   ⟹   ENSMUSP00000125270
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4152,486,395 - 152,539,500 (-)Ensembl
GRCm38.p6 Ensembl4152,401,938 - 152,455,043 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161496   ⟹   ENSMUSP00000158599
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4152,487,493 - 152,515,116 (-)Ensembl
GRCm38.p6 Ensembl4152,403,036 - 152,430,659 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161844
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4152,502,296 - 152,506,330 (-)Ensembl
GRCm38.p6 Ensembl4152,417,839 - 152,421,873 (-)Ensembl
RefSeq Acc Id: ENSMUST00000162017   ⟹   ENSMUSP00000123939
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4152,519,242 - 152,561,952 (-)Ensembl
GRCm38.p6 Ensembl4152,434,785 - 152,477,495 (-)Ensembl
RefSeq Acc Id: ENSMUST00000162165
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4152,491,640 - 152,561,976 (-)Ensembl
GRCm38.p6 Ensembl4152,407,183 - 152,477,519 (-)Ensembl
RefSeq Acc Id: ENSMUST00000162200
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4152,496,300 - 152,562,001 (-)Ensembl
GRCm38.p6 Ensembl4152,411,843 - 152,477,544 (-)Ensembl
RefSeq Acc Id: ENSMUST00000162518
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4152,510,872 - 152,533,198 (-)Ensembl
GRCm38.p6 Ensembl4152,426,415 - 152,448,741 (-)Ensembl
RefSeq Acc Id: ENSMUST00000238252   ⟹   ENSMUSP00000158771
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4152,476,196 - 152,502,864 (-)Ensembl
GRCm38.p6 Ensembl4152,391,739 - 152,418,407 (-)Ensembl
RefSeq Acc Id: ENSMUST00000238715   ⟹   ENSMUSP00000158839
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4152,475,212 - 152,515,326 (-)Ensembl
GRCm38.p6 Ensembl4152,390,755 - 152,430,869 (-)Ensembl
RefSeq Acc Id: ENSMUST00000238738   ⟹   ENSMUSP00000158843
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4152,475,203 - 152,561,896 (-)Ensembl
GRCm38.p6 Ensembl4152,390,746 - 152,477,439 (-)Ensembl
RefSeq Acc Id: NM_001252654   ⟹   NP_001239583
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,561,991 (-)NCBI
GRCm384152,390,744 - 152,477,549 (-)NCBI
Celera4154,677,906 - 154,763,688 (-)ENTREZGENE
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252655   ⟹   NP_001239584
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,533,198 (-)NCBI
GRCm384152,390,744 - 152,448,855 (-)NCBI
Celera4154,677,906 - 154,763,688 (-)ENTREZGENE
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252656   ⟹   NP_001239585
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,533,198 (-)NCBI
GRCm384152,390,744 - 152,448,855 (-)NCBI
Celera4154,677,906 - 154,763,688 (-)ENTREZGENE
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001355172   ⟹   NP_001342101
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,537,402 (-)NCBI
GRCm384152,390,744 - 152,452,945 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001355173   ⟹   NP_001342102
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,561,991 (-)NCBI
GRCm384152,390,744 - 152,477,549 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001421217   ⟹   NP_001408146
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,561,991 (-)NCBI
RefSeq Acc Id: NM_001421218   ⟹   NP_001408147
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,539,505 (-)NCBI
RefSeq Acc Id: NM_001421219   ⟹   NP_001408148
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,515,168 (-)NCBI
RefSeq Acc Id: NM_001421221   ⟹   NP_001408150
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,515,168 (-)NCBI
RefSeq Acc Id: NM_001421222   ⟹   NP_001408151
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,515,168 (-)NCBI
RefSeq Acc Id: NM_001421223   ⟹   NP_001408152
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,503,213 (-)NCBI
RefSeq Acc Id: NM_001421224   ⟹   NP_001408153
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,503,213 (-)NCBI
RefSeq Acc Id: NM_001421225   ⟹   NP_001408154
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,515,168 (-)NCBI
RefSeq Acc Id: NM_010598   ⟹   NP_034728
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,561,991 (-)NCBI
GRCm384152,390,744 - 152,477,549 (-)NCBI
MGSCv374151,764,853 - 151,851,588 (-)RGD
Celera4154,677,906 - 154,763,688 (-)ENTREZGENE
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006538584   ⟹   XP_006538647
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,533,321 (-)NCBI
GRCm384152,390,744 - 152,448,869 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006538585   ⟹   XP_006538648
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,540,152 (-)NCBI
GRCm384152,390,744 - 152,455,695 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006538586   ⟹   XP_006538649
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,561,942 (-)NCBI
GRCm384152,390,744 - 152,477,485 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006538587   ⟹   XP_006538650
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,533,320 (-)NCBI
GRCm384152,390,744 - 152,448,869 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011250199   ⟹   XP_011248501
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,561,947 (-)NCBI
GRCm384152,390,744 - 152,477,490 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030253267   ⟹   XP_030109127
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,546,993 (-)NCBI
GRCm384152,390,744 - 152,462,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163742   ⟹   XP_036019635
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394152,475,201 - 152,532,611 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001239583 (Get FASTA)   NCBI Sequence Viewer  
  NP_001239584 (Get FASTA)   NCBI Sequence Viewer  
  NP_001239585 (Get FASTA)   NCBI Sequence Viewer  
  NP_001342101 (Get FASTA)   NCBI Sequence Viewer  
  NP_001342102 (Get FASTA)   NCBI Sequence Viewer  
  NP_001408146 (Get FASTA)   NCBI Sequence Viewer  
  NP_001408147 (Get FASTA)   NCBI Sequence Viewer  
  NP_001408148 (Get FASTA)   NCBI Sequence Viewer  
  NP_001408150 (Get FASTA)   NCBI Sequence Viewer  
  NP_001408151 (Get FASTA)   NCBI Sequence Viewer  
  NP_001408152 (Get FASTA)   NCBI Sequence Viewer  
  NP_001408153 (Get FASTA)   NCBI Sequence Viewer  
  NP_001408154 (Get FASTA)   NCBI Sequence Viewer  
  NP_034728 (Get FASTA)   NCBI Sequence Viewer  
  XP_006538647 (Get FASTA)   NCBI Sequence Viewer  
  XP_006538648 (Get FASTA)   NCBI Sequence Viewer  
  XP_006538649 (Get FASTA)   NCBI Sequence Viewer  
  XP_006538650 (Get FASTA)   NCBI Sequence Viewer  
  XP_011248501 (Get FASTA)   NCBI Sequence Viewer  
  XP_030109127 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019635 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA75174 (Get FASTA)   NCBI Sequence Viewer  
  AAB00829 (Get FASTA)   NCBI Sequence Viewer  
  AAB37263 (Get FASTA)   NCBI Sequence Viewer  
  AAH39178 (Get FASTA)   NCBI Sequence Viewer  
  BAE25288 (Get FASTA)   NCBI Sequence Viewer  
  BAE31358 (Get FASTA)   NCBI Sequence Viewer  
  BAE33945 (Get FASTA)   NCBI Sequence Viewer  
  EDL14938 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000030768
  ENSMUSP00000030768.3
  ENSMUSP00000101273
  ENSMUSP00000101273.3
  ENSMUSP00000123939.2
  ENSMUSP00000124156
  ENSMUSP00000124156.3
  ENSMUSP00000124588.3
  ENSMUSP00000125058
  ENSMUSP00000125058.2
  ENSMUSP00000125270.2
  ENSMUSP00000158599.2
  ENSMUSP00000158609.2
  ENSMUSP00000158771.2
  ENSMUSP00000158839.2
  ENSMUSP00000158843
  ENSMUSP00000158843.2
GenBank Protein P62482 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_034728   ⟸   NM_010598
- Peptide Label: isoform 1
- UniProtKB: P62482 (UniProtKB/Swiss-Prot),   Q3U0B0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239583   ⟸   NM_001252654
- Peptide Label: isoform 2
- UniProtKB: Q3UPV6 (UniProtKB/TrEMBL),   Q3U0B0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239584   ⟸   NM_001252655
- Peptide Label: isoform 2
- UniProtKB: Q3UPV6 (UniProtKB/TrEMBL),   Q3U0B0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239585   ⟸   NM_001252656
- Peptide Label: isoform 1
- UniProtKB: P62482 (UniProtKB/Swiss-Prot),   Q3U0B0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006538649   ⟸   XM_006538586
- Peptide Label: isoform X4
- UniProtKB: Q3U0B0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006538648   ⟸   XM_006538585
- Peptide Label: isoform X3
- UniProtKB: Q3U0B0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006538650   ⟸   XM_006538587
- Peptide Label: isoform X4
- UniProtKB: Q3U0B0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006538647   ⟸   XM_006538584
- Peptide Label: isoform X3
- UniProtKB: Q3U0B0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011248501   ⟸   XM_011250199
- Peptide Label: isoform X3
- UniProtKB: Q3U0B0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001342102   ⟸   NM_001355173
- Peptide Label: isoform 3
- UniProtKB: Q3U0B0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030109127   ⟸   XM_030253267
- Peptide Label: isoform X5
- UniProtKB: P62482 (UniProtKB/Swiss-Prot),   Q3U0B0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001342101   ⟸   NM_001355172
- Peptide Label: isoform 1
- UniProtKB: P62482 (UniProtKB/Swiss-Prot),   Q3U0B0 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000124588   ⟸   ENSMUST00000159186
RefSeq Acc Id: ENSMUSP00000124156   ⟸   ENSMUST00000159840
RefSeq Acc Id: ENSMUSP00000158609   ⟸   ENSMUST00000159435
RefSeq Acc Id: ENSMUSP00000101273   ⟸   ENSMUST00000105648
RefSeq Acc Id: ENSMUSP00000158771   ⟸   ENSMUST00000238252
RefSeq Acc Id: ENSMUSP00000158843   ⟸   ENSMUST00000238738
RefSeq Acc Id: ENSMUSP00000158839   ⟸   ENSMUST00000238715
RefSeq Acc Id: ENSMUSP00000125058   ⟸   ENSMUST00000160884
RefSeq Acc Id: ENSMUSP00000030768   ⟸   ENSMUST00000030768
RefSeq Acc Id: ENSMUSP00000123939   ⟸   ENSMUST00000162017
RefSeq Acc Id: ENSMUSP00000125270   ⟸   ENSMUST00000161236
RefSeq Acc Id: ENSMUSP00000158599   ⟸   ENSMUST00000161496
RefSeq Acc Id: XP_036019635   ⟸   XM_036163742
- Peptide Label: isoform X3
- UniProtKB: Q3U0B0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001408146   ⟸   NM_001421217
- Peptide Label: isoform 1
- UniProtKB: P62482 (UniProtKB/Swiss-Prot),   Q3U0B0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001408147   ⟸   NM_001421218
- Peptide Label: isoform 3
- UniProtKB: Q3U0B0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001408154   ⟸   NM_001421225
- Peptide Label: isoform 8
- UniProtKB: E0CXZ9 (UniProtKB/TrEMBL),   Q3U0B0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001408151   ⟸   NM_001421222
- Peptide Label: isoform 5
- UniProtKB: A0A571BEM7 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001408150   ⟸   NM_001421221
- Peptide Label: isoform 5
- UniProtKB: A0A571BEM7 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001408148   ⟸   NM_001421219
- Peptide Label: isoform 4
- UniProtKB: A0A571BEM7 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001408152   ⟸   NM_001421223
- Peptide Label: isoform 6
- UniProtKB: A0A571BF54 (UniProtKB/TrEMBL),   Q3U0B0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001408153   ⟸   NM_001421224
- Peptide Label: isoform 7
- UniProtKB: A0A571BEM7 (UniProtKB/TrEMBL)
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P62482-F1-model_v2 AlphaFold P62482 1-367 view protein structure

Promoters
RGD ID:6835529
Promoter ID:MM_KWN:41037
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour
Transcripts:OTTMUST00000085191
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364151,791,901 - 151,792,401 (-)MPROMDB
RGD ID:6835528
Promoter ID:MM_KWN:41039
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour
Transcripts:OTTMUST00000085190
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364151,797,401 - 151,797,901 (-)MPROMDB
RGD ID:6835526
Promoter ID:MM_KWN:41040
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour
Transcripts:OTTMUST00000085189
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364151,800,151 - 151,800,651 (-)MPROMDB
RGD ID:6835527
Promoter ID:MM_KWN:41041
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour
Transcripts:OTTMUST00000085188
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364151,804,951 - 151,805,451 (-)MPROMDB
RGD ID:6835525
Promoter ID:MM_KWN:41042
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Lung,   Spleen
Transcripts:OTTMUST00000085180,   OTTMUST00000085186,   OTTMUST00000085187,   UC008WAL.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364151,822,596 - 151,823,096 (-)MPROMDB
RGD ID:6835762
Promoter ID:MM_KWN:41045
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000047943,   ENSMUST00000105647,   NM_153424,   OTTMUST00000085178,   OTTMUST00000085182,   OTTMUST00000085183,   OTTMUST00000085185,   UC008WAO.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364151,851,066 - 151,852,417 (+)MPROMDB
RGD ID:6885694
Promoter ID:EPDNEW_M6298
Type:initiation region
Name:Kcnab2_1
Description:Mus musculus potassium voltage-gated channel, shaker-relatedsubfamily, beta member 2 , transcript variant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6299  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384152,448,741 - 152,448,801EPDNEW
RGD ID:6885696
Promoter ID:EPDNEW_M6299
Type:initiation region
Name:Kcnab2_2
Description:Mus musculus potassium voltage-gated channel, shaker-relatedsubfamily, beta member 2 , transcript variant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6298  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384152,477,473 - 152,477,533EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:109239 AgrOrtholog
Ensembl Genes ENSMUSG00000028931 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000030768 ENTREZGENE
  ENSMUST00000030768.10 UniProtKB/TrEMBL
  ENSMUST00000105648 ENTREZGENE
  ENSMUST00000105648.10 UniProtKB/Swiss-Prot
  ENSMUST00000159186.9 UniProtKB/TrEMBL
  ENSMUST00000159435.8 UniProtKB/TrEMBL
  ENSMUST00000159840 ENTREZGENE
  ENSMUST00000159840.8 UniProtKB/TrEMBL
  ENSMUST00000160884 ENTREZGENE
  ENSMUST00000160884.9 UniProtKB/Swiss-Prot
  ENSMUST00000161236.8 UniProtKB/TrEMBL
  ENSMUST00000161496.9 UniProtKB/TrEMBL
  ENSMUST00000162017.3 UniProtKB/TrEMBL
  ENSMUST00000238252.2 UniProtKB/TrEMBL
  ENSMUST00000238715.2 UniProtKB/TrEMBL
  ENSMUST00000238738 ENTREZGENE
  ENSMUST00000238738.2 UniProtKB/TrEMBL
Gene3D-CATH 3.20.20.100 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro K_chnl_volt-dep_bsu_KCNAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  K_chnl_volt-dep_bsu_KCNAB-rel UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  K_chnl_volt-dep_bsu_KCNAB1 UniProtKB/TrEMBL
  K_chnl_volt-dep_bsu_KCNAB2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NADP_OxRdtase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NADP_OxRdtase_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:16498 UniProtKB/Swiss-Prot
MGD MGI:109239 ENTREZGENE
NCBI Gene 16498 ENTREZGENE
PANTHER PTHR43150 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VOLTAGE-GATED POTASSIUM CHANNEL SUBUNIT BETA-2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Aldo_ket_red UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Kcnab2 PhenoGen
PRINTS KCNAB1CHANEL UniProtKB/TrEMBL
  KCNAB2CHANEL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KCNABCHANNEL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF51430 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A571BE49_MOUSE UniProtKB/TrEMBL
  A0A571BEM7 ENTREZGENE, UniProtKB/TrEMBL
  A0A571BF54 ENTREZGENE, UniProtKB/TrEMBL
  A0A571BFX6_MOUSE UniProtKB/TrEMBL
  A0A571BGH0_MOUSE UniProtKB/TrEMBL
  E0CXI4_MOUSE UniProtKB/TrEMBL
  E0CXZ9 ENTREZGENE, UniProtKB/TrEMBL
  E0CYS2_MOUSE UniProtKB/TrEMBL
  KCAB2_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3U0B0 ENTREZGENE, UniProtKB/TrEMBL
  Q3U7L1_MOUSE UniProtKB/TrEMBL
  Q3UPV6 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary P97381 UniProtKB/Swiss-Prot
  Q60942 UniProtKB/Swiss-Prot
  Q64284 UniProtKB/Swiss-Prot