Nidd5k_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Nidd5k_m (Nidd5 on KK-A<y> (mouse)) Mus musculus

Symbol: Nidd5k_m
Name: Nidd5 on KK-A<y> (mouse)
RGD ID: 1357741
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm39155,974,948 - 89,975,057MOUSEQTLGRCm39
GRCm38155,935,789 - 89,935,898MOUSEQTLGRCm38
MGSCv37155,982,363 - 89,982,472 (+)MOUSEQTLGRCm37
cM Map136.94MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Nidd5k_mMousehomeostasis/metabolism phenotype  IEA 704405Created by mouse qtl pipelineMGIPMID:12115031
Nidd5k_mMousehyperglycemia  IAGP 5509061 MGIPMID:12115031

#
Reference Title
Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
PMID:12115031  



1 to 20 of 1192 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
16219759130227L01RikRIKEN cDNA 9130227L01 gene15597040056011257Mouse
16119041700003I22RikRIKEN cDNA 1700003I22 gene15605813756059362Mouse
39128444LOC109279972VISTA enhancer mm61315632548956326702Mouse
329962643LOC131295608STARR-seq mESC enhancer starr_0096315639420056395388Mouse
329964154LOC131295609STARR-seq mESC enhancer starr_0096415641909856420399Mouse
39130106Gm53554predicted gene, 5355415647612256548866Mouse
329968308LOC131295610STARR-seq mESC enhancer starr_0096615660518956608792Mouse
1557392Hsfy2heat shock transcription factor, Y-linked 215667520356676610Mouse
329966082LOC131295611STARR-seq mESC enhancer starr_0096715669132056692723Mouse
329968347LOC131295612STARR-seq mESC enhancer starr_0096915673596656737198Mouse
329963174LOC131295613STARR-seq mESC enhancer starr_0097115681074056811931Mouse
329967506LOC131295614STARR-seq mESC enhancer starr_0097215681779756819019Mouse
1558379Satb2special AT-rich sequence binding protein 215683314557019350Mouse
329963492LOC131295615STARR-seq mESC enhancer starr_0097315688285156884686Mouse
15021970Gm51624predicted gene, 5162415692455656933373Mouse
329964051LOC131295616STARR-seq mESC enhancer starr_0097415697723356978761Mouse
329962393LOC131295617STARR-seq mESC enhancer starr_0097515699227956994535Mouse
16219749130024F11RikRIKEN cDNA 9130024F11 gene15701062857014355Mouse
10034076Gm38484predicted gene, 3848415704166357081678Mouse
16097661700126A01RikRIKEN cDNA 1700126A01 gene15716647457168559Mouse

1 to 20 of 1192 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match

1 to 10 of 92 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4142015Idd5.3_minsulin dependent diabetes susceptibility 5.3 (mouse)Not determined6652316270077076Mouse
25394563Skmw48_mskeletal muscle weight 48, EDL (mouse)18547800687323158Mouse
15039333Nmrs1_mNAFLD-associated magnetic resonance shift 1 (mouse)189786512123786512Mouse
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
12910788Pwgrq9_mpost-weaning growth rate QTL 9 (mouse)14086800867270256Mouse
1357847Jckm2_mjuvenile cystic kidney modifier 2 (mouse)Not determined174991977133290937Mouse
4142394Mssq1_mmandible size and shape QTL 1 (mouse)Not determined73615692107615830Mouse
4141625Emo4_memotionality 4 (mouse)Not determined6807134586235027Mouse
18182931Metl1_mmetabolite locus 1, pyridoxate (mouse)14127539975275399Mouse
1558928Mord2_mmodifier of retinal degeneration 2 (mouse)Not determined177123115110536075Mouse

1 to 10 of 92 rows


Database
Acc Id
Source(s)
MGD MGI:3038860

Note Type Note Reference