Ugt1a9 (UDP glucuronosyltransferase 1 family, polypeptide A9) - Rat Genome Database
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Gene: Ugt1a9 (UDP glucuronosyltransferase 1 family, polypeptide A9) Mus musculus
Analyze
Symbol: Ugt1a9
Name: UDP glucuronosyltransferase 1 family, polypeptide A9
RGD ID: 1619653
MGI Page MGI
Description: Human ortholog(s) of this gene implicated in alcoholic pancreatitis and pancreatic cancer. Orthologous to several human genes including UGT1A8 (UDP glucuronosyltransferase family 1 member A8); PARTICIPATES IN artemether pharmacokinetics pathway; ibuprofen pharmacodynamics pathway; ibuprofen pharmacokinetics pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3,3',4,4',5-pentachlorobiphenyl; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: A1; A12; mUGTBr; mUGTBr/P; UDP glycosyltransferase 1 family polypeptide A12; UDP-glucuronosyltransferase 1-7; UDP-glucuronosyltransferase 1-9; UDP-glucuronosyltransferase 1A9; UDPGT; UDPGT 1-9; UGT1*9; UGT1-09; UGT1.9; Ugt1a12; UGTP4
RGD Orthologs
Human
Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39187,998,501 - 88,147,724 (+)NCBIGRCm39mm39
GRCm39 Ensembl187,998,522 - 88,146,719 (+)Ensembl
GRCm38188,070,779 - 88,220,002 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl188,070,800 - 88,218,997 (+)EnsemblGRCm38mm10GRCm38
MGSCv37189,967,354 - 90,116,577 (+)NCBIGRCm37mm9NCBIm37
MGSCv36189,901,971 - 90,050,168 (+)NCBImm8
Celera191,032,114 - 91,181,062 (+)NCBICelera
Cytogenetic Map1DNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-cotinine  (ISO)
(5Z,8Z,11Z,13E)-15-HETE  (ISO)
(S)-naringenin  (ISO)
(S)-nicotine  (ISO)
1-Hydroxypyrene  (ISO)
1-naphthol  (ISO)
1-naphthylamine  (ISO)
17beta-estradiol  (ISO)
2',4,4',6'-tetrahydroxychalcone  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-acetamidofluorene  (ISO)
2-hydroxyestrone  (ISO)
2-methoxy-17beta-estradiol  (ISO)
2-tert-butylhydroquinone  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
3-methylcholanthrene  (ISO)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
4-hydroxyestrone  (ISO)
4-hydroxyphenytoin  (ISO)
4-methylumbelliferone  (ISO)
4-methylumbelliferone beta-D-glucuronide  (ISO)
4-nitrophenol  (ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (ISO)
6-propyl-2-thiouracil  (ISO)
aflatoxin B1  (ISO)
alizarin  (ISO)
Aloe emodin  (ISO)
amentoflavone  (ISO)
ammonium chloride  (ISO)
amphotericin B  (ISO)
anthraflavic acid  (ISO)
anthrarobin  (ISO)
apigenin  (ISO)
arachidonic acid  (ISO)
arsenous acid  (ISO)
benoxaprofen  (ISO)
benzo[a]pyrene  (EXP,ISO)
bergomottin  (ISO)
beta-naphthoflavone  (EXP,ISO)
bezafibrate  (ISO)
biochanin A  (ISO)
biphenyl-4-amine  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (ISO)
Bropirimine  (ISO)
buta-1,3-diene  (EXP)
calycosin  (ISO)
capsaicin  (ISO)
chenodeoxycholic acid  (ISO)
chrysin  (ISO)
chrysophanol  (ISO)
ciglitazone  (ISO)
ciprofibrate  (EXP)
cisplatin  (ISO)
clofibrate  (EXP,ISO)
clofibric acid  (ISO)
coumestrol  (ISO)
curcumin  (ISO)
cyproconazole  (EXP)
daidzein  (ISO)
dexamethasone  (EXP)
Diallyl sulfide  (EXP)
diarsenic trioxide  (ISO)
dibenzo[a,l]pyrene  (ISO)
dichloroacetic acid  (EXP)
diclofenac  (ISO)
dimethyl sulfoxide  (ISO)
emodin  (ISO)
entacapone  (ISO)
epoxiconazole  (EXP)
equol  (ISO)
estrone  (ISO)
ethanol  (ISO)
etodolac  (ISO)
eugenol  (ISO)
farnesol  (ISO)
fipronil  (EXP)
fisetin  (ISO)
fluconazole  (ISO)
flurbiprofen  (ISO)
formononetin  (ISO)
galangin  (ISO)
genistein  (ISO)
gentamycin  (ISO)
glabridin  (ISO)
glycidol  (ISO)
Grepafloxacin  (ISO)
ibuprofen  (ISO)
indometacin  (ISO)
irinotecan  (ISO)
isoliquiritigenin  (ISO)
kaempferol  (ISO)
ketoprofen  (ISO)
L-ascorbic acid  (ISO)
lorcaserin  (ISO)
Magnolol  (ISO)
mangiferin  (ISO)
masoprocol  (ISO)
methotrexate  (ISO)
methoxychlor  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
morin  (ISO)
morphine  (ISO)
moxifloxacin  (ISO)
mycophenolic acid  (ISO)
N-hydroxy-PhIP  (ISO)
naproxen  (ISO)
nicotine  (ISO)
Niflumic acid  (ISO)
obeticholic acid  (ISO)
ofloxacin  (ISO)
omeprazole  (ISO)
oxazepam  (ISO)
p-cresol  (ISO)
paracetamol  (ISO)
perfluorooctanoic acid  (EXP)
phenobarbital  (ISO)
physcion  (ISO)
pirinixic acid  (ISO)
plumbagin  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP,ISO)
probenecid  (ISO)
propiconazole  (EXP)
propofol  (ISO)
prostaglandin B1  (ISO)
pterostilbene  (ISO)
puerarin  (ISO)
quercetin  (ISO)
quinizarin  (ISO)
resveratrol  (ISO)
rifampicin  (ISO)
sarpogrelate  (ISO)
scopoletin  (ISO)
sevoflurane  (ISO)
Shikonin  (ISO)
silibinin  (ISO)
Sitafloxacin  (ISO)
spironolactone  (EXP)
testosterone  (ISO)
thymol  (ISO)
thymol sulfate(1-)  (ISO)
thyroxine  (ISO)
tolcapone  (ISO)
triclocarban  (ISO)
umbelliferone  (ISO)
ursodeoxycholic acid  (ISO)
valproic acid  (ISO)
vitamin E  (ISO)
warfarin  (ISO)
zearalenone  (ISO)

References

Additional References at PubMed
PMID:8464825   PMID:12477932   PMID:14672974   PMID:14681479   PMID:16916647   PMID:21267068   PMID:21873635   PMID:27514509  


Genomics

Comparative Map Data
Ugt1a9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39187,998,501 - 88,147,724 (+)NCBIGRCm39mm39
GRCm39 Ensembl187,998,522 - 88,146,719 (+)Ensembl
GRCm38188,070,779 - 88,220,002 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl188,070,800 - 88,218,997 (+)EnsemblGRCm38mm10GRCm38
MGSCv37189,967,354 - 90,116,577 (+)NCBIGRCm37mm9NCBIm37
MGSCv36189,901,971 - 90,050,168 (+)NCBImm8
Celera191,032,114 - 91,181,062 (+)NCBICelera
Cytogenetic Map1DNCBI
UGT1A9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2233,671,898 - 233,773,300 (+)EnsemblGRCh38hg38GRCh38
GRCh382233,671,898 - 233,773,300 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372234,580,544 - 234,681,946 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362234,245,283 - 234,346,690 (+)NCBINCBI36hg18NCBI36
Build 342234,362,543 - 234,463,949NCBI
Celera2228,301,174 - 228,402,583 (+)NCBI
Cytogenetic Map2q37.1NCBI
HuRef2226,380,547 - 226,481,785 (+)NCBIHuRef
CHM1_12234,586,358 - 234,687,812 (+)NCBICHM1_1
Ugt1a9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2988,696,981 - 88,808,465 (+)NCBI
Rnor_6.0 Ensembl995,161,157 - 95,302,822 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0995,161,157 - 95,302,822 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0994,880,265 - 94,990,037 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4986,986,915 - 87,098,362 (+)NCBIRGSC3.4rn4RGSC3.4
Celera986,258,411 - 86,369,556 (+)NCBICelera
Cytogenetic Map9q35NCBI

Position Markers
PMC153064P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38188,201,037 - 88,201,490UniSTSGRCm38
MGSCv37190,097,612 - 90,098,065UniSTSGRCm37
Celera191,162,107 - 91,162,560UniSTS
Cytogenetic Map1DUniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13824984Twq5_mtestis weight QTL 5 (mouse)13000000185000000Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134721057150318120Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134721057150318120Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134721057150318120Mouse
1357721Sle17_msystematic lupus erythematosus susceptibility 17 (mouse)Not determined139093727126517573Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145744740189571420Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52418578182423027Mouse
1357741Nidd5k_mNidd5 on KK-A<y> (mouse)Not determined15593578989935898Mouse
1357505Vtbt1_mvertebral trabecular bone trait 1 (mouse)Not determined15622705590227201Mouse
4142467Wbcq1_mwhite blood cell quantitative locus 1 (mouse)Not determined15622705590227201Mouse
1301933Insq6_minsulin QTL 6 (mouse)Not determined15668776390687918Mouse
1558717Ses1a_msalmonella enteritidis susceptibility 1a (mouse)Not determined15668776390687918Mouse
14746998Mancz1_mmandible centroid size 1 (mouse)15790219291902192Mouse
14747009Manh49_mmandible shape 49 (mouse)15790219291902192Mouse
1300746Skl1_mskeletal size (tail length) 1 (mouse)Not determined15795281891952921Mouse
1357679Egrm1_mearly growth rate, maternal effect 1 (mouse)Not determined15795281891952921Mouse
1301162Skull1_mskull morphology 1 (mouse)Not determined15795281891952921Mouse
1301444Alcw5_malcohol withdrawal 5 (mouse)Not determined15857254792572799Mouse
1301667Lxw5_mlupus BXSB x NZW 5 (mouse)Not determined15857254792572799Mouse
1301748Abbp1_mA/J and C57BL/6 blood pressure 1 (mouse)Not determined162907596120601949Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163815531189571420Mouse
1300841Ssial1_msusceptibility to sialadenitis 1 (mouse)Not determined163880843153681816Mouse
1302119Cia15_mcollagen induced arthritis 15 (mouse)Not determined16584984788568379Mouse
27095918Ulnl1_mulna length 1, 5 week (mouse)167300000129800000Mouse
1302146Cocrb1_mcocaine related behavior 1 (mouse)Not determined170205811104211835Mouse
1300976Bmd19_mbone mineral density 19 (mouse)Not determined173227055108910684Mouse
4142394Mssq1_mmandible size and shape QTL 1 (mouse)Not determined73687970107688108Mouse
1301304Hrq3_mheart rate quantitative locus 3 (mouse)Not determined173687970107688108Mouse
1300989Lrdg1_mlight induced retinal degeneration 1 (mouse)Not determined173716016147249632Mouse
4141914Gcsfis_mG-CSF induced splenomegaly (mouse)Not determined74477076148839837Mouse
1357847Jckm2_mjuvenile cystic kidney modifier 2 (mouse)Not determined174952818133363199Mouse
1300821Lore1_mloss of righting induced by ethanol 1 (mouse)Not determined17557254793013355Mouse
27095931Pglq1_mpelvic girdle length QTL 1, 5 week (mouse)176000000128600000Mouse
27095928Pglq6_mpelvic girdle length QTL 6, 10 week (mouse)176000000148900000Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)176000000181500000Mouse
1558928Mord2_mmodifier of retinal degeneration 2 (mouse)Not determined177146478110608345Mouse
14697706Stsl3a_mSalmonella typhimurium susceptibility locus 3a (mouse)17750000095900000Mouse
14696693Avd2q1_mattack value day 2 QTL 1 (mouse)17900000091000000Mouse
4141725Wbcq4_mwhite blood cell quantitative locus 4 (mouse)Not determined179930958113931066Mouse
12050069Nabq1_mnasal bone morphology QTL 1 (mouse)179930958113931066Mouse
13452395Leusq2_mleucocytosis susceptibility QTL 2 (mouse)180267876126458780Mouse
14696692Tavq1_mtotal attack value QTL 1 (mouse)18200000088500000Mouse
1301350Nidd4k_mNidd4 on KK-A (mouse)Not determined782314261147249632Mouse
1357439Popoa_mpremature ovulation and primary oocyte arrest (mouse)Not determined182665468135687641Mouse
10412238Alpq5_malcohol preference QTL 5 (mouse)Not determined182904910116904910Mouse
12791004Aath7_maortic arch atherosclerosis 7 (mouse)182904910116904910Mouse
25394564Skmw49_mskeletal muscle weight 49, TA (mouse)18344239888624908Mouse
11667074Led2_mlate embryonic death 2 (mouse)185768306117267351Mouse
12790991Aath1_maortic arch atherosclerosis 1 (mouse)186556204120556204Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:185
Count of miRNA genes:167
Interacting mature miRNAs:173
Transcripts:ENSMUST00000073772
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000073772   ⟹   ENSMUSP00000073444
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl188,070,800 - 88,218,997 (+)Ensembl
RefSeq Acc Id: NM_201644   ⟹   NP_964006
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39187,998,501 - 88,147,724 (+)NCBI
GRCm38188,070,779 - 88,220,002 (+)ENTREZGENE
MGSCv37189,967,354 - 90,116,577 (+)RGD
Celera191,032,114 - 91,181,062 (+)RGD
cM Map1 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_964006   ⟸   NM_201644
- Peptide Label: precursor
- UniProtKB: Q62452 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000073444   ⟸   ENSMUST00000073772

Promoters
RGD ID:6818686
Promoter ID:MM_KWN:1542
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:NM_201644
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36189,967,066 - 89,967,566 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3576092 AgrOrtholog
Ensembl Genes ENSMUSG00000090175 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000073444 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000073772 ENTREZGENE, UniProtKB/Swiss-Prot
InterPro UDP_glucos_trans UniProtKB/Swiss-Prot
  UDP_glycos_trans_CS UniProtKB/Swiss-Prot
KEGG Report mmu:394434 UniProtKB/Swiss-Prot
MGD MGI:3576092 ENTREZGENE
NCBI Gene 394434 ENTREZGENE
Pfam UDPGT UniProtKB/Swiss-Prot
PharmGKB UGT1A9 RGD
PhenoGen Ugt1a9 PhenoGen
PROSITE UDPGT UniProtKB/Swiss-Prot
UniProt Q62452 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary A6H6W3 UniProtKB/Swiss-Prot
  E9QN27 UniProtKB/Swiss-Prot
  Q6XL44 UniProtKB/Swiss-Prot