Hycc2 (hyccin PI4KA lipid kinase complex subunit 2) - Rat Genome Database

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Gene: Hycc2 (hyccin PI4KA lipid kinase complex subunit 2) Mus musculus
Analyze
Symbol: Hycc2
Name: hyccin PI4KA lipid kinase complex subunit 2
RGD ID: 1320257
MGI Page MGI
Description: Predicted to be involved in phosphatidylinositol phosphate biosynthetic process and protein localization to plasma membrane. Predicted to be located in cytoplasm and membrane. Predicted to be active in plasma membrane. Orthologous to human HYCC2 (hyccin PI4KA lipid kinase complex subunit 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C130065N10Rik; D1Ertd53; D1Ertd53e; D630010C10; Fam126b; family with sequence similarity 126, member B; hyccin 2; RIKEN cDNA C130065N10 gene
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39158,561,965 - 58,625,492 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl158,561,965 - 58,625,482 (-)EnsemblGRCm39 Ensembl
GRCm38158,522,806 - 58,586,333 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl158,522,806 - 58,586,323 (-)EnsemblGRCm38mm10GRCm38
MGSCv37158,579,650 - 58,643,177 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36158,471,779 - 58,510,500 (-)NCBIMGSCv36mm8
Celera159,040,768 - 59,105,918 (-)NCBICelera
Cytogenetic Map1C1.3NCBI
cM Map129.12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15489334   PMID:16141072   PMID:16141073  
PMID:18799693   PMID:21267068   PMID:21873635   PMID:32325033   PMID:38187761  


Genomics

Comparative Map Data
Hycc2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39158,561,965 - 58,625,492 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl158,561,965 - 58,625,482 (-)EnsemblGRCm39 Ensembl
GRCm38158,522,806 - 58,586,333 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl158,522,806 - 58,586,323 (-)EnsemblGRCm38mm10GRCm38
MGSCv37158,579,650 - 58,643,177 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36158,471,779 - 58,510,500 (-)NCBIMGSCv36mm8
Celera159,040,768 - 59,105,918 (-)NCBICelera
Cytogenetic Map1C1.3NCBI
cM Map129.12NCBI
HYCC2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382200,973,718 - 201,071,671 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2200,973,718 - 201,071,671 (-)EnsemblGRCh38hg38GRCh38
GRCh372201,838,441 - 201,936,394 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362201,552,032 - 201,644,637 (-)NCBINCBI36Build 36hg18NCBI36
Celera2195,593,067 - 195,691,017 (-)NCBICelera
Cytogenetic Map2q33.1NCBI
HuRef2193,689,774 - 193,787,896 (-)NCBIHuRef
CHM1_12201,844,437 - 201,942,410 (-)NCBICHM1_1
T2T-CHM13v2.02201,457,164 - 201,555,113 (-)NCBIT2T-CHM13v2.0
Hycc2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8967,551,064 - 67,623,353 (-)NCBIGRCr8
mRatBN7.2960,056,883 - 60,129,176 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl960,056,890 - 60,093,007 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx968,551,324 - 68,623,553 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0973,667,255 - 73,739,498 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0971,985,327 - 72,057,759 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0965,406,136 - 65,478,399 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl965,406,138 - 65,442,257 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0965,213,173 - 65,285,837 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4957,180,410 - 57,252,641 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1957,327,391 - 57,399,623 (-)NCBI
Celera957,499,544 - 57,570,448 (-)NCBICelera
Cytogenetic Map9q31NCBI
Hycc2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955403483,675 - 564,503 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955403483,671 - 564,509 (+)NCBIChiLan1.0ChiLan1.0
HYCC2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213103,600,605 - 103,698,737 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B103,615,604 - 103,713,736 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B88,231,222 - 88,329,311 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B206,390,867 - 206,487,787 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B206,395,627 - 206,487,785 (-)Ensemblpanpan1.1panPan2
HYCC2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13710,162,728 - 10,240,061 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3710,169,973 - 10,238,994 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3711,047,940 - 11,125,445 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03710,068,399 - 10,110,212 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3710,068,619 - 10,145,308 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13710,049,686 - 10,127,191 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03710,027,455 - 10,105,121 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03710,021,429 - 10,098,943 (-)NCBIUU_Cfam_GSD_1.0
Hycc2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303158,291,456 - 158,367,824 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936726268,873 - 338,048 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936726261,530 - 338,105 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HYCC2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15104,665,729 - 104,747,567 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115104,665,720 - 104,747,688 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215116,039,889 - 116,072,168 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HYCC2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11086,645,109 - 86,723,148 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1086,644,742 - 86,723,138 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040112,696,185 - 112,780,209 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hycc2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624889141,657 - 208,518 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Hycc2
1591 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2779
Count of miRNA genes:777
Interacting mature miRNAs:1007
Transcripts:ENSMUST00000038372, ENSMUST00000097724, ENSMUST00000159185, ENSMUST00000159980, ENSMUST00000160546, ENSMUST00000161000, ENSMUST00000161600
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1357475w3q13_mweight 3 weeks QTL 13 (mouse)Not determined12310959173976915Mouse
11100001Col4a1m1_mcollagen, type IV, alpha 1 modifier 1 (mouse)12555019162946882Mouse
12880409V125Dq1_mvitamin D active form serum level QTL 1 (mouse)12603916060039160Mouse
1357824Estoq4_membryo survival total QTL 4 (mouse)Not determined13476013873976915Mouse
39128207Lwq16_mliver weight QTL 16 (mouse)13476013873976915Mouse
1357759W3q12_mweight 3 weeks QTL 12 (mouse)Not determined13476013873976915Mouse
1357651Lgq5_mlate growth QTL 5 (mouse)Not determined13476013873976915Mouse
1357506W10q6_mweight 10 weeks QTL 6 (mouse)Not determined13476013873976915Mouse
1357524W6q14_mweight 6 weeks QTL 14 (mouse)Not determined13476013873976915Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134760138150193871Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134760138150193871Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134760138150193871Mouse
1301954Lrnx11_mlearning-contextual 11 (mouse)Not determined13913280874516365Mouse
1357721Sle17_msystematic lupus erythematosus susceptibility 17 (mouse)Not determined139132808126445310Mouse
12910780Pwgrq11_mpost-weaning growth rate QTL 11 (mouse)14086800867270256Mouse
12910786Pwgrq10_mpost-weaning growth rate QTL 10 (mouse)14086800867270256Mouse
12910788Pwgrq9_mpost-weaning growth rate QTL 9 (mouse)14086800867270256Mouse
1301166Thypr2_mthymocyte proliferative response 2 (mouse)Not determined14127312475273271Mouse
18182931Metl1_mmetabolite locus 1, pyridoxate (mouse)14127539975275399Mouse
4141032Wbcc1_mwhite blood cell count 1 (mouse)Not determined4225966776259667Mouse
1301714Vertcling_mvertical clinging (mouse)Not determined14293803176938167Mouse
12879917Shm3_msperm head morphology 3 (mouse)14418690462946882Mouse
1558855Eae30_mexperimental allergic encephalomyelitis susceptibility 30 (mouse)Not determined14541777372975057Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
1301670Ssta1_msusceptibility to Salmonella typhimurium antigens 1 (mouse)Not determined14594675579946882Mouse
1301616Yaa2_mY-linked autoimmune acceleration 2 (mouse)Not determined14685469080854839Mouse
1301225Sle7_msystematic lupus erythematosus susceptibility 7 (mouse)Not determined14685469080854839Mouse
1558905Gct7_mgranulosa cell tumorigenesis 7 (mouse)Not determined14734989481350013Mouse
1558822Vas1_mautoimmune vasitis resistance 1 (mouse)Not determined14888900682889210Mouse
1301211Bbaa11_mB.burgdorferi-associated arthritis 11 (mouse)Not determined14888900682889210Mouse
1301430Cdcs2_mcytokine deficiency colitis susceptibility 2 (mouse)Not determined14889234582892485Mouse
10043965Obq24_mobesity QTL 24 (mouse)Not determined15089021684890216Mouse
4141305Tgq9_mtriglyceride QTL 9 (mouse)Not determined5142160585421605Mouse
4142307Shali1_msurvival time to hyperoxic acute lung injury 1 (mouse)Not determined5196402570406589Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
1357741Nidd5k_mNidd5 on KK-A<y> (mouse)Not determined15597494889975057Mouse
4142467Wbcq1_mwhite blood cell quantitative locus 1 (mouse)Not determined15626621490266360Mouse
1357505Vtbt1_mvertebral trabecular bone trait 1 (mouse)Not determined15626621490266360Mouse
1558717Ses1a_msalmonella enteritidis susceptibility 1a (mouse)Not determined15672692290727077Mouse
1301933Insq6_minsulin QTL 6 (mouse)Not determined15672692290727077Mouse
4141724Idd5.1_minsulin dependent diabetes susceptibility 5.1 (mouse)Not determined5772827662946882Mouse
14746998Mancz1_mmandible centroid size 1 (mouse)15794135191941351Mouse
14747009Manh49_mmandible shape 49 (mouse)15794135191941351Mouse
1300746Skl1_mskeletal size (tail length) 1 (mouse)Not determined15799197791992080Mouse
1357679Egrm1_mearly growth rate, maternal effect 1 (mouse)Not determined15799197791992080Mouse
1301162Skull1_mskull morphology 1 (mouse)Not determined15799197791992080Mouse
1301667Lxw5_mlupus BXSB x NZW 5 (mouse)Not determined15854919192549443Mouse
1301444Alcw5_malcohol withdrawal 5 (mouse)Not determined15854919192549443Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001310598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001310599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_172513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC118698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK144602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC049806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC068302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY265998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA556879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000038372   ⟹   ENSMUSP00000038718
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl158,568,242 - 58,625,350 (-)Ensembl
GRCm38.p6 Ensembl158,529,083 - 58,586,191 (-)Ensembl
RefSeq Acc Id: ENSMUST00000097724   ⟹   ENSMUSP00000095331
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl158,566,180 - 58,625,425 (-)Ensembl
GRCm38.p6 Ensembl158,527,021 - 58,586,266 (-)Ensembl
RefSeq Acc Id: ENSMUST00000159185
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl158,604,763 - 58,625,456 (-)Ensembl
GRCm38.p6 Ensembl158,565,604 - 58,586,297 (-)Ensembl
RefSeq Acc Id: ENSMUST00000159980
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl158,596,519 - 58,625,436 (-)Ensembl
GRCm38.p6 Ensembl158,557,360 - 58,586,277 (-)Ensembl
RefSeq Acc Id: ENSMUST00000160546
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl158,596,492 - 58,625,423 (-)Ensembl
GRCm38.p6 Ensembl158,557,333 - 58,586,264 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161000   ⟹   ENSMUSP00000125653
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl158,591,346 - 58,625,434 (-)Ensembl
GRCm38.p6 Ensembl158,552,187 - 58,586,275 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161600   ⟹   ENSMUSP00000123728
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl158,561,965 - 58,625,482 (-)Ensembl
GRCm38.p6 Ensembl158,522,806 - 58,586,323 (-)Ensembl
RefSeq Acc Id: ENSMUST00000187717   ⟹   ENSMUSP00000141058
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl158,566,902 - 58,605,113 (-)Ensembl
GRCm38.p6 Ensembl158,527,743 - 58,565,954 (-)Ensembl
RefSeq Acc Id: ENSMUST00000191472
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl158,601,590 - 58,604,379 (-)Ensembl
GRCm38.p6 Ensembl158,562,431 - 58,565,220 (-)Ensembl
RefSeq Acc Id: NM_001310598   ⟹   NP_001297527
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39158,561,965 - 58,625,492 (-)NCBI
GRCm38158,522,806 - 58,586,333 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001310599   ⟹   NP_001297528
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39158,561,965 - 58,625,313 (-)NCBI
GRCm38158,522,806 - 58,586,154 (-)NCBI
Sequence:
RefSeq Acc Id: NM_172513   ⟹   NP_766101
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39158,561,965 - 58,625,492 (-)NCBI
GRCm38158,522,806 - 58,586,333 (-)NCBI
Celera159,040,768 - 59,105,918 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006495832   ⟹   XP_006495895
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39158,566,830 - 58,625,468 (-)NCBI
GRCm38158,527,671 - 58,586,320 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006495833   ⟹   XP_006495896
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39158,566,830 - 58,625,462 (-)NCBI
GRCm38158,527,671 - 58,586,320 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319657   ⟹   XP_017175146
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39158,565,444 - 58,625,468 (-)NCBI
GRCm38158,527,671 - 58,586,319 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319658   ⟹   XP_017175147
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39158,566,830 - 58,625,465 (-)NCBI
GRCm38158,522,811 - 58,586,316 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252754   ⟹   XP_030108614
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39158,564,754 - 58,625,461 (-)NCBI
GRCm38158,522,811 - 58,586,302 (-)NCBI
Sequence:
RefSeq Acc Id: NP_766101   ⟸   NM_172513
- Peptide Label: isoform b
- UniProtKB: Q3UMY7 (UniProtKB/Swiss-Prot),   Q6NV64 (UniProtKB/Swiss-Prot),   Q8C729 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006495896   ⟸   XM_006495833
- Peptide Label: isoform X1
- UniProtKB: Q8C729 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006495895   ⟸   XM_006495832
- Peptide Label: isoform X1
- UniProtKB: Q8C729 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001297527   ⟸   NM_001310598
- Peptide Label: isoform a
- UniProtKB: Q8C729 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017175147   ⟸   XM_017319658
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_017175146   ⟸   XM_017319657
- Peptide Label: isoform X2
- UniProtKB: Q3UMY7 (UniProtKB/Swiss-Prot),   Q6NV64 (UniProtKB/Swiss-Prot),   Q8C729 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001297528   ⟸   NM_001310599
- Peptide Label: isoform b
- UniProtKB: Q3UMY7 (UniProtKB/Swiss-Prot),   Q6NV64 (UniProtKB/Swiss-Prot),   Q8C729 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030108614   ⟸   XM_030252754
- Peptide Label: isoform X2
- UniProtKB: Q8C729 (UniProtKB/Swiss-Prot),   Q3UMY7 (UniProtKB/Swiss-Prot),   Q6NV64 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: ENSMUSP00000141058   ⟸   ENSMUST00000187717
RefSeq Acc Id: ENSMUSP00000095331   ⟸   ENSMUST00000097724
RefSeq Acc Id: ENSMUSP00000123728   ⟸   ENSMUST00000161600
RefSeq Acc Id: ENSMUSP00000125653   ⟸   ENSMUST00000161000
RefSeq Acc Id: ENSMUSP00000038718   ⟸   ENSMUST00000038372

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8C729-F1-model_v2 AlphaFold Q8C729 1-530 view protein structure

Promoters
RGD ID:6873800
Promoter ID:EPDNEW_M351
Type:initiation region
Name:Fam126b_1
Description:Mus musculus family with sequence similarity 126, member B ,transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38158,586,283 - 58,586,343EPDNEW
RGD ID:6818202
Promoter ID:MM_KWN:838
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:NM_172513,   OTTMUST00000065876,   OTTMUST00000065878,   OTTMUST00000065880,   OTTMUST00000065881,   OTTMUST00000065882,   OTTMUST00000065883,   UC007BCH.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36158,642,746 - 58,643,532 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1098784 AgrOrtholog
Ensembl Genes ENSMUSG00000038174 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000038372 ENTREZGENE
  ENSMUST00000038372.14 UniProtKB/Swiss-Prot
  ENSMUST00000097724 ENTREZGENE
  ENSMUST00000097724.10 UniProtKB/Swiss-Prot
  ENSMUST00000161000.2 UniProtKB/TrEMBL
  ENSMUST00000161600 ENTREZGENE
  ENSMUST00000161600.8 UniProtKB/Swiss-Prot
  ENSMUST00000187717.7 UniProtKB/TrEMBL
InterPro Hyccin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:213056 UniProtKB/Swiss-Prot
MGD MGI:1098784 ENTREZGENE
NCBI Gene 213056 ENTREZGENE
PANTHER PROTEIN FAM126B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR31220 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Hyccin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Hycc2 PhenoGen
UniProt A0A087WSI2_MOUSE UniProtKB/TrEMBL
  E0CZ67_MOUSE UniProtKB/TrEMBL
  F126B_MOUSE UniProtKB/Swiss-Prot
  Q3UMY7 ENTREZGENE
  Q6NV64 ENTREZGENE
  Q8C729 ENTREZGENE
UniProt Secondary Q3UMY7 UniProtKB/Swiss-Prot
  Q6NV64 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-08-22 Hycc2  hyccin PI4KA lipid kinase complex subunit 2  Fam126b  family with sequence similarity 126, member B  Symbol and/or name updated 27372883 PROVISIONAL
2016-04-05 Fam126b  family with sequence similarity 126, member B  C130065N10Rik  RIKEN cDNA C130065N10 gene  Data merged from RGD:1609454 737654 PROVISIONAL
2014-09-10 Fam126b  family with sequence similarity 126, member B  BC049806  cDNA sequence BC049806  Symbol and/or name change 5135510 APPROVED