Ugt1a5 (UDP glucuronosyltransferase 1 family, polypeptide A5) - Rat Genome Database

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Gene: Ugt1a5 (UDP glucuronosyltransferase 1 family, polypeptide A5) Mus musculus
Analyze
Symbol: Ugt1a5
Name: UDP glucuronosyltransferase 1 family, polypeptide A5
RGD ID: 1619654
MGI Page MGI
Description: Predicted to enable enzyme binding activity; glucuronosyltransferase activity; and protein dimerization activity. Predicted to be active in endoplasmic reticulum. Orthologous to several human genes including UGT1A5 (UDP glucuronosyltransferase family 1 member A5).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: UDP glycosyltransferase 1 family, polypeptide A5
RGD Orthologs
Human
Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39188,093,734 - 88,147,724 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl188,093,734 - 88,146,719 (+)EnsemblGRCm39 Ensembl
GRCm38188,166,012 - 88,220,002 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl188,166,012 - 88,218,997 (+)EnsemblGRCm38mm10GRCm38
MGSCv37190,062,587 - 90,116,577 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36189,997,183 - 90,050,148 (+)NCBIMGSCv36mm8
Celera191,126,155 - 91,181,062 (+)NCBICelera
Cytogenetic Map1DNCBI
cM Map144.53NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Object Symbol
Species
Term
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Evidence
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Reference
Notes
Source
Original Reference(s)
Ugt1a5Mousebilirubin metabolic disorder  ISOUGT1A4 (Homo sapiens)8554872ClinVar Annotator: match by term: HyperbilirubinemiaClinVarPMID:10975608 more ...
Ugt1a5MouseCrigler Najjar Syndrome, Type 1  ISOUGT1A4 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:10412811 more ...
Ugt1a5MouseCrigler Najjar Syndrome, Type 2  ISOUGT1A4 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:10412811 more ...
Ugt1a5MouseCrigler-Najjar syndrome  ISOUGT1A4 (Homo sapiens)8554872ClinVar Annotator: match by term: Crigler-Najjar syndromeClinVarPMID:11013440 more ...
Ugt1a5Mousegenetic disease  ISOUGT1A4 (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:11182932 more ...
Ugt1a5MouseGilbert syndrome  ISOUGT1A4 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:10412811 more ...
Ugt1a5MouseHyperbilirubinemia, Transient Familial Neonatal  ISOUGT1A4 (Homo sapiens)8554872ClinVar Annotator: match by term: Transient familial neonatal hyperbilirubinemiaClinVarPMID:10412811 more ...
Ugt1a5MouseJoubert syndrome 22  ISOUGT1A4 (Homo sapiens)8554872ClinVar Annotator: match by term: Joubert syndrome 22ClinVarPMID:28492532
Ugt1a5MousePerlman syndrome  ISOUGT1A4 (Homo sapiens)8554872ClinVar Annotator: match by term: Perlman syndromeClinVarPMID:28492532
1 to 9 of 9 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ugt1a5Mouseceliac disease  ISOUGT1A4 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:30097691

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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ugt1a5Mouse(-)-cotinine increases glucuronidationISOUGT1A4 (Homo sapiens)6480464UGT1A4 protein results in increased glucuronidation of CotinineCTDPMID:14570768 and PMID:16141602
Ugt1a5Mouse(5Z,8Z,11Z,13E)-15-HETE increases glucuronidationISOUGT1A4 (Homo sapiens)6480464UGT1A4 protein results in increased glucuronidation of 15-hydroxy-5 more ...CTDPMID:15231852
Ugt1a5Mouse(S)-nicotine increases glucuronidationISOUGT1A4 (Homo sapiens)6480464UGT1A4 protein results in increased glucuronidation of NicotineCTDPMID:14570768 and PMID:16141602
Ugt1a5Mouse(S)-nicotine decreases expressionEXP 6480464Nicotine results in decreased expression of UGT1A5 mRNACTDPMID:21955143
Ugt1a5Mouse1-Hydroxypyrene increases glucuronidationISOUGT1A4 (Homo sapiens)6480464UGT1A4 protein results in increased glucuronidation of 1-hydroxypyreneCTDPMID:15802387
Ugt1a5Mouse17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of UGT1A5 mRNACTDPMID:39298647
Ugt1a5Mouse2,3,7,8-tetrachlorodibenzodioxine increases activityISOUGT1A4 (Homo sapiens)6480464Tetrachlorodibenzodioxin results in increased activity of UGT1A4 proteinCTDPMID:16155002
Ugt1a5Mouse2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of UGT1A5 mRNACTDPMID:26377647
Ugt1a5Mouse2,3,7,8-tetrachlorodibenzodioxine multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with AHR protein mutant form] results in decreased expression of UGT1A5 mRNA and NFE2L2 protein affects the reaction [Tetrachlorodibenzodioxin results in increased expression of UGT1A5 mRNA]CTDPMID:19474220 and PMID:22496397
Ugt1a5Mouse2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of UGT1A5 mRNACTDPMID:19474220
Ugt1a5Mouse2,3,7,8-tetrachlorodibenzodioxine affects response to substanceISOUGT1A4 (Homo sapiens)6480464UGT1A4 promoter SNP affects the susceptibility to TetrachlorodibenzodioxinCTDPMID:18433817
Ugt1a5Mouse2,3,7,8-tetrachlorodibenzodioxine increases expressionISOUGT1A4 (Homo sapiens)6480464Tetrachlorodibenzodioxin results in increased expression of UGT1A4 mRNA and Tetrachlorodibenzodioxin results in increased expression of UGT1A4 proteinCTDPMID:16155002 and PMID:18433817
Ugt1a5Mouse20-HETE increases glucuronidationISOUGT1A4 (Homo sapiens)6480464UGT1A4 protein results in increased glucuronidation of 20-hydroxy-5 more ...CTDPMID:15231852
Ugt1a5Mouse3-methylcholanthrene increases expressionISOUGT1A4 (Homo sapiens)6480464Methylcholanthrene results in increased expression of UGT1A4 mRNACTDPMID:19118567
Ugt1a5Mouse4,4'-sulfonyldiphenol affects expressionEXP 6480464bisphenol S affects the expression of UGT1A5 mRNACTDPMID:39298647
Ugt1a5Mouse4,4'-sulfonyldiphenol affects methylationEXP 6480464bisphenol S affects the methylation of UGT1A5 geneCTDPMID:31683443
Ugt1a5Mouse4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one increases glucuronidationISOUGT1A4 (Homo sapiens)6480464UGT1A4 gene polymorphism results in increased glucuronidation of 4-(N-methyl-N-nitrosamino)-1-(3-pyridyl)-1-butanone and UGT1A4 protein results in increased glucuronidation of 4-(N-methyl-N-nitrosamino)-1-(3-pyridyl)-1-butanoneCTDPMID:14871856 and PMID:31307193
Ugt1a5Mouse4-hydroxyphenytoin multiple interactionsISOUGT1A4 (Homo sapiens)6480464UGT1A4 protein results in increased glucuronidation of and results in decreased activity of hydroxyphenytoinCTDPMID:15855726
Ugt1a5Mouse5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole increases expressionISOUGT1A4 (Homo sapiens)6480464Omeprazole results in increased expression of UGT1A4 mRNACTDPMID:19118567
Ugt1a5MouseAfloqualone increases glucuronidationISOUGT1A4 (Homo sapiens)6480464UGT1A4 protein results in increased glucuronidation of afloqualoneCTDPMID:15475412

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Biological Process

  

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ugt1a5Mouseendoplasmic reticulum is_active_inIBAPANTHER:PTN002630028 more ...2290270 GO_CentralGO_REF:0000033
Ugt1a5Mouseendoplasmic reticulum located_inISOUniProtKB:P223102290270 GO_CentralGO_REF:0000119

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ugt1a5Mouseenzyme binding enablesISOUniProtKB:P223102290270 GO_CentralGO_REF:0000119
Ugt1a5Mouseenzyme binding enablesIBAPANTHER:PTN002630028 more ...2290270 GO_CentralGO_REF:0000033
Ugt1a5Mouseglucuronosyltransferase activity enablesISOUniProtKB:P223102290270 GO_CentralGO_REF:0000119
Ugt1a5Mouseprotein heterodimerization activity enablesISOUniProtKB:P223102290270 GO_CentralGO_REF:0000119
Ugt1a5Mouseprotein homodimerization activity enablesISOUniProtKB:P223102290270 GO_CentralGO_REF:0000119
Ugt1a5Mouseretinoic acid binding NOT|enablesISOUGT1A4 (Homo sapiens)9068941 PMID:20308471BHF-UCLPMID:20308471

Imported Annotations - SMPDB

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ugt1a5Mouseascorbate and aldarate metabolic pathway  IEA 6907045 KEGGmmu:00053
Ugt1a5MouseO-linked glycan biosynthetic pathway  IEA 6907045 KEGGmmu:00514
Ugt1a5Mousepentose and glucuronate interconversion pathway  IEA 6907045 KEGGmmu:00040
Ugt1a5Mouseporphyrin and chlorophyll metabolic pathway  IEA 6907045 KEGGmmu:00860
Ugt1a5Mouseretinol metabolic pathway   IEA 6907045 KEGGmmu:00830
Ugt1a5Mousestarch and sucrose metabolic pathway  IEA 6907045 KEGGmmu:00500
Ugt1a5Mousesteroid hormone biosynthetic pathway   IEA 6907045 KEGGmmu:00140

#
Reference Title
Reference Citation
1. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
2. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:12477932   PMID:14672974   PMID:14681479   PMID:15052633   PMID:21267068   PMID:21873635  



Ugt1a5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39188,093,734 - 88,147,724 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl188,093,734 - 88,146,719 (+)EnsemblGRCm39 Ensembl
GRCm38188,166,012 - 88,220,002 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl188,166,012 - 88,218,997 (+)EnsemblGRCm38mm10GRCm38
MGSCv37190,062,587 - 90,116,577 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36189,997,183 - 90,050,148 (+)NCBIMGSCv36mm8
Celera191,126,155 - 91,181,062 (+)NCBICelera
Cytogenetic Map1DNCBI
cM Map144.53NCBI
UGT1A4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382233,718,736 - 233,773,300 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2233,718,736 - 233,773,300 (+)EnsemblGRCh38hg38GRCh38
GRCh372234,627,382 - 234,681,946 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362234,292,177 - 234,346,684 (+)NCBINCBI36Build 36hg18NCBI36
Build 342234,409,437 - 234,463,945NCBI
Celera2228,348,057 - 228,402,577 (+)NCBICelera
Cytogenetic Map2q37.1NCBI
HuRef2226,427,432 - 226,481,779 (+)NCBIHuRef
CHM1_12234,633,252 - 234,682,899 (+)NCBICHM1_1
T2T-CHM13v2.02234,207,385 - 234,261,929 (+)NCBIT2T-CHM13v2.0
Ugt1a5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8996,210,053 - 96,256,264 (+)NCBIGRCr8
mRatBN7.2988,762,250 - 88,808,465 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl988,713,184 - 88,808,465 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx997,186,086 - 97,232,360 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.09102,322,282 - 102,368,552 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.09100,690,441 - 100,736,659 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0995,256,628 - 95,302,822 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl995,161,157 - 95,302,822 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0994,943,844 - 94,990,037 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4987,052,169 - 87,098,362 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera986,323,550 - 86,369,556 (+)NCBICelera
Cytogenetic Map9q35NCBI

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Variants in Ugt1a5
2802 total Variants

Predicted Target Of
Summary Value
Count of predictions:185
Count of miRNA genes:167
Interacting mature miRNAs:173
Transcripts:ENSMUST00000097659
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 50 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1357847Jckm2_mjuvenile cystic kidney modifier 2 (mouse)Not determined174991977133290937Mouse
4142394Mssq1_mmandible size and shape QTL 1 (mouse)Not determined73615692107615830Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
1558928Mord2_mmodifier of retinal degeneration 2 (mouse)Not determined177123115110536075Mouse
25394564Skmw49_mskeletal muscle weight 49, TA (mouse)18342011988552630Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
14697706Stsl3a_mSalmonella typhimurium susceptibility locus 3a (mouse)17747663795827725Mouse
12790991Aath1_maortic arch atherosclerosis 1 (mouse)186483929120483929Mouse
1357721Sle17_msystematic lupus erythematosus susceptibility 17 (mouse)Not determined139132808126445310Mouse

1 to 10 of 50 rows
PMC153064P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38188,201,037 - 88,201,490UniSTSGRCm38
MGSCv37190,097,612 - 90,098,065UniSTSGRCm37
Celera191,162,107 - 91,162,560UniSTS
Cytogenetic Map1DUniSTS







Ensembl Acc Id: ENSMUST00000097659   ⟹   ENSMUSP00000095263
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl188,093,734 - 88,146,719 (+)Ensembl
GRCm38.p6 Ensembl188,166,012 - 88,218,997 (+)Ensembl
RefSeq Acc Id: NM_201643   ⟹   NP_964005
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39188,093,734 - 88,147,724 (+)NCBI
GRCm38188,166,012 - 88,220,002 (+)ENTREZGENE
MGSCv37190,062,587 - 90,116,577 (+)RGD
Celera191,126,155 - 91,181,062 (+)RGD
cM Map1 ENTREZGENE
Sequence:
Protein RefSeqs NP_964005 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI39094 (Get FASTA)   NCBI Sequence Viewer  
  AAI39095 (Get FASTA)   NCBI Sequence Viewer  
  AAP48595 (Get FASTA)   NCBI Sequence Viewer  
  BAD11305 (Get FASTA)   NCBI Sequence Viewer  
  EDL40128 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000095263
  ENSMUSP00000095263.5
RefSeq Acc Id: NP_964005   ⟸   NM_201643
- Peptide Label: precursor
- UniProtKB: B2RT14 (UniProtKB/TrEMBL),   Q6XL48 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000095263   ⟸   ENSMUST00000097659

Name Modeler Protein Id AA Range Protein Structure
AF-B2RT14-F1-model_v2 AlphaFold B2RT14 1-529 view protein structure

RGD ID:6818681
Promoter ID:MM_KWN:1555
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Liver
Transcripts:NM_201643
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36190,062,409 - 90,062,909 (+)MPROMDB


1 to 19 of 19 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000089943 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000097659 ENTREZGENE
  ENSMUST00000097659.5 UniProtKB/TrEMBL
Gene3D-CATH Glycogen Phosphorylase B UniProtKB/TrEMBL
InterPro UDP-glycosyltransferase UniProtKB/TrEMBL
  UDP_glucos_trans UniProtKB/TrEMBL
  UDP_glycos_trans_CS UniProtKB/TrEMBL
KEGG Report mmu:394433 UniProtKB/TrEMBL
MGD MGI:3032634 ENTREZGENE
NCBI Gene 394433 ENTREZGENE
PANTHER EG:EG0003.4 PROTEIN-RELATED UniProtKB/TrEMBL
  UDP GLUCURONOSYLTRANSFERASE FAMILY 1 MEMBER A1 UniProtKB/TrEMBL
Pfam UDPGT UniProtKB/TrEMBL
PhenoGen Ugt1a5 PhenoGen
PROSITE UDPGT UniProtKB/TrEMBL
Superfamily-SCOP UDP-Glycosyltransferase/glycogen phosphorylase UniProtKB/TrEMBL
UniProt B2RT14 ENTREZGENE, UniProtKB/TrEMBL
  Q6XL48 ENTREZGENE, UniProtKB/TrEMBL
  Q76K67_MOUSE UniProtKB/TrEMBL
1 to 19 of 19 rows