Tns1 (tensin 1) - Rat Genome Database

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Gene: Tns1 (tensin 1) Mus musculus
Analyze
Symbol: Tns1
Name: tensin 1
RGD ID: 1552102
MGI Page MGI
Description: Predicted to enable actin binding activity. Acts upstream of or within cell-substrate junction assembly and fibroblast migration. Located in focal adhesion. Is expressed in several structures, including future brain; gut; heart; metanephros; and yolk sac. Orthologous to human TNS1 (tensin 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1110018I21Rik; 1200014E20Rik; AI648117; E030018G17Rik; E030037J05Rik; T; tensin-1; Tns
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39173,949,391 - 74,163,707 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl173,949,390 - 74,163,608 (-)EnsemblGRCm39 Ensembl
GRCm38173,910,232 - 74,124,548 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl173,910,231 - 74,124,449 (-)EnsemblGRCm38mm10GRCm38
MGSCv37173,956,805 - 74,171,021 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36173,843,438 - 74,057,654 (-)NCBIMGSCv36mm8
Celera174,471,979 - 74,685,728 (-)NCBICelera
Cytogenetic Map1C3NCBI
cM Map138.17NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3-Nitrobenzanthrone  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-\{[(5,5,8,8-tetramethyl-5,6,7,8-tetrahydronaphthalen-2-yl)carbonyl]amino\}benzoic acid  (ISO)
6-propyl-2-thiouracil  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
ammonium chloride  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
Benoxacor  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
benzo[e]pyrene  (ISO)
beta-hexachlorocyclohexane  (EXP)
bexarotene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (EXP,ISO)
butanal  (ISO)
C60 fullerene  (ISO)
caffeine  (ISO)
calyculin a  (EXP)
carbon nanotube  (EXP)
cefaloridine  (ISO)
CGP 52608  (ISO)
chlordecone  (EXP)
ciglitazone  (ISO)
ciguatoxin CTX1B  (EXP)
cisplatin  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (ISO)
cyclosporin A  (EXP,ISO)
decabromodiphenyl ether  (ISO)
deoxynivalenol  (EXP)
dexamethasone  (EXP)
dibutyl phthalate  (EXP,ISO)
dioxygen  (ISO)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
ethanol  (EXP)
fenamidone  (EXP)
folic acid  (EXP)
formaldehyde  (ISO)
FR900359  (ISO)
genistein  (EXP)
glyphosate  (EXP,ISO)
Heptachlor epoxide  (EXP)
hexadecanoic acid  (ISO)
inulin  (EXP)
lead diacetate  (EXP)
leflunomide  (ISO)
Licochalcone B  (ISO)
lipopolysaccharide  (EXP)
methamphetamine  (EXP)
methapyrilene  (ISO)
methoxychlor  (ISO)
methyl methanesulfonate  (ISO)
N,N-diethyl-m-toluamide  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (ISO)
nickel atom  (ISO)
nickel dichloride  (ISO)
nickel sulfate  (ISO)
O-methyleugenol  (ISO)
orphenadrine  (ISO)
ozone  (EXP)
paracetamol  (EXP,ISO)
paraquat  (ISO)
pentachlorophenol  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
permethrin  (ISO)
phenobarbital  (EXP,ISO)
potassium bromate  (EXP)
potassium chromate  (ISO)
progesterone  (ISO)
propiconazole  (EXP)
quercetin  (ISO)
resveratrol  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
sodium arsenate  (EXP)
sodium dichromate  (ISO)
sunitinib  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP)
toluene  (ISO)
trichostatin A  (ISO)
triclosan  (ISO)
trimellitic anhydride  (EXP)
triptonide  (EXP)
valproic acid  (EXP,ISO)
vancomycin  (EXP)
vinclozolin  (ISO)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Genes for tensin, villin and desmin are linked on mouse chromosome 1. Jankowski SA and Gumucio DL, Mamm Genome 1995 Oct;6(10):744-5.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. Progressive kidney degeneration in mice lacking tensin. Lo SH, etal., J Cell Biol 1997 Mar 24;136(6):1349-61.
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. MGD IEA MGD IEA
6. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:9383296   PMID:10349636   PMID:11023826   PMID:11042159   PMID:11076861   PMID:11389681   PMID:11544199   PMID:11792844   PMID:12477932   PMID:14610273   PMID:14691545  
PMID:15733665   PMID:15741177   PMID:16141072   PMID:16141073   PMID:18799693   PMID:19208226   PMID:20737513   PMID:21267068   PMID:21873635   PMID:26301497   PMID:26427649   PMID:28671696  


Genomics

Comparative Map Data
Tns1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39173,949,391 - 74,163,707 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl173,949,390 - 74,163,608 (-)EnsemblGRCm39 Ensembl
GRCm38173,910,232 - 74,124,548 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl173,910,231 - 74,124,449 (-)EnsemblGRCm38mm10GRCm38
MGSCv37173,956,805 - 74,171,021 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36173,843,438 - 74,057,654 (-)NCBIMGSCv36mm8
Celera174,471,979 - 74,685,728 (-)NCBICelera
Cytogenetic Map1C3NCBI
cM Map138.17NCBI
TNS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382217,799,791 - 218,033,982 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2217,799,588 - 218,033,982 (-)EnsemblGRCh38hg38GRCh38
GRCh372218,664,514 - 218,867,718 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362218,372,757 - 218,517,041 (-)NCBINCBI36Build 36hg18NCBI36
Build 342218,493,009 - 218,634,267NCBI
Celera2212,432,401 - 212,576,690 (-)NCBICelera
Cytogenetic Map2q35NCBI
HuRef2210,519,516 - 210,524,347 (-)NCBIHuRef
HuRef2210,526,374 - 210,662,745 (-)NCBIHuRef
CHM1_12218,670,911 - 218,815,174 (-)NCBICHM1_1
T2T-CHM13v2.02218,283,109 - 218,495,456 (-)NCBIT2T-CHM13v2.0
Tns1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8982,941,068 - 83,152,007 (-)NCBIGRCr8
mRatBN7.2975,491,886 - 75,702,853 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl975,495,814 - 75,703,225 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx983,949,371 - 84,156,277 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0989,078,281 - 89,285,195 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0987,464,486 - 87,671,405 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0981,190,192 - 81,401,020 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl981,194,119 - 81,400,987 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0980,960,130 - 81,166,699 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4973,235,556 - 73,444,200 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1973,382,620 - 73,386,133 (-)NCBI
Celera973,072,641 - 73,280,128 (-)NCBICelera
Cytogenetic Map9q33NCBI
Tns1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545315,260,286 - 15,479,519 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545315,289,722 - 15,483,970 (+)NCBIChiLan1.0ChiLan1.0
TNS1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213120,433,886 - 120,646,111 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B120,448,853 - 120,661,063 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B105,061,135 - 105,273,098 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B223,666,272 - 223,852,483 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B223,666,273 - 223,805,653 (-)Ensemblpanpan1.1panPan2
TNS1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13724,578,855 - 24,776,153 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3724,581,806 - 24,808,049 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3725,399,889 - 25,596,598 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03724,594,870 - 24,792,203 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3724,597,850 - 24,806,453 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13724,501,077 - 24,698,131 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03724,435,719 - 24,632,442 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03724,454,878 - 24,651,749 (-)NCBIUU_Cfam_GSD_1.0
Tns1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303174,102,338 - 174,311,852 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936569445,110 - 654,664 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936569447,730 - 654,662 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TNS1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15119,951,091 - 120,164,713 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115119,948,133 - 120,143,797 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215133,071,108 - 133,110,920 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TNS1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110103,665,575 - 103,886,824 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10103,669,412 - 103,879,641 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604095,520,792 - 95,727,467 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tns1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248236,956,918 - 7,150,058 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248236,956,913 - 7,149,854 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Tns1
7291 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2300
Count of miRNA genes:772
Interacting mature miRNAs:1044
Transcripts:ENSMUST00000169786
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1357475w3q13_mweight 3 weeks QTL 13 (mouse)Not determined12310959173976915Mouse
1357824Estoq4_membryo survival total QTL 4 (mouse)Not determined13476013873976915Mouse
39128207Lwq16_mliver weight QTL 16 (mouse)13476013873976915Mouse
1357759W3q12_mweight 3 weeks QTL 12 (mouse)Not determined13476013873976915Mouse
1357651Lgq5_mlate growth QTL 5 (mouse)Not determined13476013873976915Mouse
1357506W10q6_mweight 10 weeks QTL 6 (mouse)Not determined13476013873976915Mouse
1357524W6q14_mweight 6 weeks QTL 14 (mouse)Not determined13476013873976915Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134760138150193871Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134760138150193871Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134760138150193871Mouse
1301954Lrnx11_mlearning-contextual 11 (mouse)Not determined13913280874516365Mouse
1357721Sle17_msystematic lupus erythematosus susceptibility 17 (mouse)Not determined139132808126445310Mouse
1301166Thypr2_mthymocyte proliferative response 2 (mouse)Not determined14127312475273271Mouse
18182931Metl1_mmetabolite locus 1, pyridoxate (mouse)14127539975275399Mouse
4141032Wbcc1_mwhite blood cell count 1 (mouse)Not determined4225966776259667Mouse
1301714Vertcling_mvertical clinging (mouse)Not determined14293803176938167Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
1301670Ssta1_msusceptibility to Salmonella typhimurium antigens 1 (mouse)Not determined14594675579946882Mouse
1301616Yaa2_mY-linked autoimmune acceleration 2 (mouse)Not determined14685469080854839Mouse
1301225Sle7_msystematic lupus erythematosus susceptibility 7 (mouse)Not determined14685469080854839Mouse
1558905Gct7_mgranulosa cell tumorigenesis 7 (mouse)Not determined14734989481350013Mouse
1558822Vas1_mautoimmune vasitis resistance 1 (mouse)Not determined14888900682889210Mouse
1301211Bbaa11_mB.burgdorferi-associated arthritis 11 (mouse)Not determined14888900682889210Mouse
1301430Cdcs2_mcytokine deficiency colitis susceptibility 2 (mouse)Not determined14889234582892485Mouse
10043965Obq24_mobesity QTL 24 (mouse)Not determined15089021684890216Mouse
4141305Tgq9_mtriglyceride QTL 9 (mouse)Not determined5142160585421605Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
1357741Nidd5k_mNidd5 on KK-A<y> (mouse)Not determined15597494889975057Mouse
4142467Wbcq1_mwhite blood cell quantitative locus 1 (mouse)Not determined15626621490266360Mouse
1357505Vtbt1_mvertebral trabecular bone trait 1 (mouse)Not determined15626621490266360Mouse
1558717Ses1a_msalmonella enteritidis susceptibility 1a (mouse)Not determined15672692290727077Mouse
1301933Insq6_minsulin QTL 6 (mouse)Not determined15672692290727077Mouse
14746998Mancz1_mmandible centroid size 1 (mouse)15794135191941351Mouse
14747009Manh49_mmandible shape 49 (mouse)15794135191941351Mouse
1300746Skl1_mskeletal size (tail length) 1 (mouse)Not determined15799197791992080Mouse
1357679Egrm1_mearly growth rate, maternal effect 1 (mouse)Not determined15799197791992080Mouse
1301162Skull1_mskull morphology 1 (mouse)Not determined15799197791992080Mouse
1301667Lxw5_mlupus BXSB x NZW 5 (mouse)Not determined15854919192549443Mouse
1301444Alcw5_malcohol withdrawal 5 (mouse)Not determined15854919192549443Mouse
1301748Abbp1_mA/J and C57BL/6 blood pressure 1 (mouse)Not determined162946755120529678Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
1300841Ssial1_msusceptibility to sialadenitis 1 (mouse)Not determined163920002153557562Mouse
1302119Cia15_mcollagen induced arthritis 15 (mouse)Not determined16588900688496101Mouse
27095918Ulnl1_mulna length 1, 5 week (mouse)167339159129727737Mouse
4141625Emo4_memotionality 4 (mouse)Not determined6807134586235027Mouse
1302146Cocrb1_mcocaine related behavior 1 (mouse)Not determined170133533104139557Mouse
4141393Mol2_mmodifier of LPS-response 2 (mouse)Not determined7162467978183144Mouse
1300976Bmd19_mbone mineral density 19 (mouse)Not determined173266214108838414Mouse
4142394Mssq1_mmandible size and shape QTL 1 (mouse)Not determined73615692107615830Mouse
1301304Hrq3_mheart rate quantitative locus 3 (mouse)Not determined173615692107615830Mouse
1300989Lrdg1_mlight induced retinal degeneration 1 (mouse)Not determined173755175147125370Mouse
14697705Stsl3b_mSalmonella typhimurium susceptibility locus 3b (mouse)17413915981777715Mouse

Markers in Region
AI648117  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38173,913,231 - 73,913,366UniSTSGRCm38
MGSCv37173,959,805 - 73,959,940UniSTSGRCm37
Celera174,474,979 - 74,475,114UniSTS
Cytogenetic Map1C3UniSTS
cM Map144.5UniSTS
Whitehead/MRC_RH11102.7UniSTS
05.MMHAP84FRB8.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38173,951,544 - 73,951,696UniSTSGRCm38
MGSCv37173,998,118 - 73,998,270UniSTSGRCm37
Celera174,513,635 - 74,513,787UniSTS
Cytogenetic Map1C3UniSTS
cM Map144.5UniSTS
Whitehead_YAC1 UniSTS
D1Mit180  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38173,937,620 - 73,937,756UniSTSGRCm38
MGSCv37173,984,194 - 73,984,330UniSTSGRCm37
Celera174,499,710 - 74,499,846UniSTS
Cytogenetic Map1C3UniSTS
cM Map141.0UniSTS
Whitehead Genetic141.5UniSTS
Whitehead/MRC_RH11100.37UniSTS
Whitehead_YAC1 UniSTS
UniSTS:234149  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38173,914,062 - 73,914,247UniSTSGRCm38
MGSCv37173,960,636 - 73,960,821UniSTSGRCm37
Celera174,475,810 - 74,475,995UniSTS
Cytogenetic Map1C3UniSTS
cM Map144.5UniSTS
D1Mcg105  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38174,080,595 - 74,080,816UniSTSGRCm38
MGSCv37174,127,169 - 74,127,390UniSTSGRCm37
Celera174,643,922 - 74,644,135UniSTS
Cytogenetic Map1C3UniSTS
cM Map138.9UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001289895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001413787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001413788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001413789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001413790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001413791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_027884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011238476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011238477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC116419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC117757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI315947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK086989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK156648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW611438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC026430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC052740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC055076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF171717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF540284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ125619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ241954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN697610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000169786   ⟹   ENSMUSP00000127715
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl173,949,390 - 74,163,606 (-)Ensembl
GRCm38.p6 Ensembl173,910,231 - 74,124,447 (-)Ensembl
RefSeq Acc Id: ENSMUST00000185264
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl173,964,576 - 73,969,970 (-)Ensembl
GRCm38.p6 Ensembl173,925,417 - 73,930,811 (-)Ensembl
RefSeq Acc Id: ENSMUST00000185331   ⟹   ENSMUSP00000140771
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl173,953,276 - 74,034,531 (-)Ensembl
GRCm38.p6 Ensembl173,914,117 - 73,995,372 (-)Ensembl
RefSeq Acc Id: ENSMUST00000185529
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl173,964,789 - 73,969,664 (-)Ensembl
GRCm38.p6 Ensembl173,925,630 - 73,930,505 (-)Ensembl
RefSeq Acc Id: ENSMUST00000185702   ⟹   ENSMUSP00000140094
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl173,953,252 - 74,034,531 (-)Ensembl
GRCm38.p6 Ensembl173,914,093 - 73,995,372 (-)Ensembl
RefSeq Acc Id: ENSMUST00000186381
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl174,029,533 - 74,055,581 (-)Ensembl
GRCm38.p6 Ensembl173,990,374 - 74,016,422 (-)Ensembl
RefSeq Acc Id: ENSMUST00000187281   ⟹   ENSMUSP00000139616
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl174,032,322 - 74,076,292 (-)Ensembl
GRCm38.p6 Ensembl173,993,163 - 74,037,133 (-)Ensembl
RefSeq Acc Id: ENSMUST00000187584   ⟹   ENSMUSP00000140254
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl173,949,391 - 74,130,510 (-)Ensembl
GRCm38.p6 Ensembl173,910,232 - 74,091,351 (-)Ensembl
RefSeq Acc Id: ENSMUST00000187691   ⟹   ENSMUSP00000139844
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl173,953,070 - 73,967,672 (-)Ensembl
GRCm38.p6 Ensembl173,913,911 - 73,928,513 (-)Ensembl
RefSeq Acc Id: ENSMUST00000188208   ⟹   ENSMUSP00000140837
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl174,036,214 - 74,136,027 (-)Ensembl
GRCm38.p6 Ensembl173,997,055 - 74,096,868 (-)Ensembl
RefSeq Acc Id: ENSMUST00000188436
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl174,033,952 - 74,036,854 (-)Ensembl
GRCm38.p6 Ensembl173,994,793 - 73,997,695 (-)Ensembl
RefSeq Acc Id: ENSMUST00000188942
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl174,019,799 - 74,026,222 (-)Ensembl
GRCm38.p6 Ensembl173,980,640 - 73,987,063 (-)Ensembl
RefSeq Acc Id: ENSMUST00000189228   ⟹   ENSMUSP00000139721
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl173,964,289 - 73,980,173 (-)Ensembl
GRCm38.p6 Ensembl173,925,130 - 73,941,014 (-)Ensembl
RefSeq Acc Id: ENSMUST00000189571
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl174,031,259 - 74,037,627 (-)Ensembl
GRCm38.p6 Ensembl173,992,100 - 73,998,468 (-)Ensembl
RefSeq Acc Id: ENSMUST00000190389   ⟹   ENSMUSP00000140448
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl174,031,364 - 74,040,726 (-)Ensembl
GRCm38.p6 Ensembl173,992,205 - 74,001,567 (-)Ensembl
RefSeq Acc Id: ENSMUST00000190599
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl174,041,475 - 74,076,316 (-)Ensembl
GRCm38.p6 Ensembl174,002,316 - 74,037,157 (-)Ensembl
RefSeq Acc Id: ENSMUST00000191104   ⟹   ENSMUSP00000140317
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl173,949,391 - 74,163,608 (-)Ensembl
GRCm38.p6 Ensembl173,910,232 - 74,124,449 (-)Ensembl
RefSeq Acc Id: ENSMUST00000191204   ⟹   ENSMUSP00000140878
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl174,034,447 - 74,135,984 (-)Ensembl
GRCm38.p6 Ensembl173,995,288 - 74,096,825 (-)Ensembl
RefSeq Acc Id: ENSMUST00000191264
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl174,028,881 - 74,037,627 (-)Ensembl
GRCm38.p6 Ensembl173,989,722 - 73,998,468 (-)Ensembl
RefSeq Acc Id: ENSMUST00000191367   ⟹   ENSMUSP00000140991
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl173,992,532 - 74,002,202 (-)Ensembl
GRCm38.p6 Ensembl173,953,373 - 73,963,043 (-)Ensembl
RefSeq Acc Id: ENSMUST00000191527
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl173,964,576 - 73,967,376 (-)Ensembl
GRCm38.p6 Ensembl173,925,417 - 73,928,217 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212888   ⟹   ENSMUSP00000148638
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl173,953,689 - 74,163,606 (-)Ensembl
GRCm38.p6 Ensembl173,914,530 - 74,124,447 (-)Ensembl
RefSeq Acc Id: ENSMUST00000239451   ⟹   ENSMUSP00000159329
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl173,953,689 - 74,137,835 (-)Ensembl
GRCm38.p6 Ensembl173,914,530 - 74,098,676 (-)Ensembl
RefSeq Acc Id: NM_001289895   ⟹   NP_001276824
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,163,707 (-)NCBI
GRCm38173,910,232 - 74,124,548 (-)NCBI
Celera174,471,979 - 74,685,730 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001413787   ⟹   NP_001400716
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,130,468 (-)NCBI
RefSeq Acc Id: NM_001413788   ⟹   NP_001400717
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,047,707 (-)NCBI
RefSeq Acc Id: NM_001413789   ⟹   NP_001400718
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,107,826 (-)NCBI
RefSeq Acc Id: NM_001413790   ⟹   NP_001400719
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,076,291 (-)NCBI
RefSeq Acc Id: NM_001413791   ⟹   NP_001400720
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,076,291 (-)NCBI
RefSeq Acc Id: NM_027884   ⟹   NP_082160
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,163,707 (-)NCBI
GRCm38173,910,232 - 74,124,548 (-)NCBI
MGSCv37173,956,805 - 74,171,021 (-)RGD
Celera174,471,979 - 74,685,730 (-)NCBI
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006495867   ⟹   XP_006495930
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,147,575 (-)NCBI
GRCm38173,910,232 - 74,108,416 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006495871   ⟹   XP_006495934
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,163,689 (-)NCBI
GRCm38173,910,232 - 74,124,530 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006495872   ⟹   XP_006495935
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,130,505 (-)NCBI
GRCm38173,910,232 - 74,091,346 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006495873   ⟹   XP_006495936
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,066,081 (-)NCBI
GRCm38173,910,232 - 74,026,922 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006495874   ⟹   XP_006495937
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,076,344 (-)NCBI
GRCm38173,910,232 - 74,037,185 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006495875   ⟹   XP_006495938
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,108,229 (-)NCBI
GRCm38173,910,232 - 74,069,070 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006495877   ⟹   XP_006495940
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,076,343 (-)NCBI
GRCm38173,910,232 - 74,037,184 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006495878   ⟹   XP_006495941
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,147,348 (-)NCBI
GRCm38173,910,232 - 74,108,190 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006495879   ⟹   XP_006495942
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,055,580 (-)NCBI
GRCm38173,910,232 - 74,016,421 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006495880   ⟹   XP_006495943
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,070,009 (-)NCBI
GRCm38173,910,232 - 74,030,852 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006495881   ⟹   XP_006495944
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,041,120 (-)NCBI
GRCm38173,910,232 - 74,001,845 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006495882   ⟹   XP_006495945
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,037,678 (-)NCBI
GRCm38173,910,232 - 73,998,507 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006495883   ⟹   XP_006495946
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,002,208 (-)NCBI
GRCm38173,910,232 - 73,963,049 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011238476   ⟹   XP_011236778
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,108,132 (-)NCBI
GRCm38173,910,232 - 74,068,976 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011238477   ⟹   XP_011236779
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,055,715 (-)NCBI
GRCm38173,910,232 - 74,016,557 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319847   ⟹   XP_017175336
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,147,575 (-)NCBI
GRCm38173,910,232 - 74,108,416 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319848   ⟹   XP_017175337
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,147,575 (-)NCBI
GRCm38173,910,232 - 74,108,416 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319853   ⟹   XP_017175342
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,147,575 (-)NCBI
GRCm38173,910,232 - 74,108,416 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319856   ⟹   XP_017175345
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,147,575 (-)NCBI
GRCm38173,910,232 - 74,108,416 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319858   ⟹   XP_017175347
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,147,575 (-)NCBI
GRCm38173,910,232 - 74,108,416 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319859   ⟹   XP_017175348
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,147,575 (-)NCBI
GRCm38173,910,232 - 74,108,416 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319860   ⟹   XP_017175349
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,147,575 (-)NCBI
GRCm38173,910,232 - 74,108,416 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319862   ⟹   XP_017175351
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,137,501 (-)NCBI
GRCm38173,910,232 - 74,098,505 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319863   ⟹   XP_017175352
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,147,575 (-)NCBI
GRCm38173,910,232 - 74,108,416 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319864   ⟹   XP_017175353
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,147,575 (-)NCBI
GRCm38173,910,232 - 74,108,416 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319865   ⟹   XP_017175354
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,147,575 (-)NCBI
GRCm38173,910,232 - 74,108,416 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319866   ⟹   XP_017175355
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,147,575 (-)NCBI
GRCm38173,910,232 - 74,108,416 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252982   ⟹   XP_030108842
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,163,689 (-)NCBI
GRCm38173,910,232 - 74,124,530 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252983   ⟹   XP_030108843
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,130,505 (-)NCBI
GRCm38173,910,232 - 74,091,346 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252984   ⟹   XP_030108844
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,147,575 (-)NCBI
GRCm38173,910,232 - 74,108,416 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252985   ⟹   XP_030108845
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,076,343 (-)NCBI
GRCm38173,910,232 - 74,037,183 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252986   ⟹   XP_030108846
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,002,208 (-)NCBI
GRCm38173,910,232 - 73,963,049 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252987   ⟹   XP_030108847
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,002,208 (-)NCBI
GRCm38173,910,232 - 73,963,049 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252988   ⟹   XP_030108848
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,002,208 (-)NCBI
GRCm38173,910,232 - 73,963,049 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163578   ⟹   XP_036019471
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,147,575 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163588   ⟹   XP_036019481
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,147,575 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163609   ⟹   XP_036019502
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,047,629 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163612   ⟹   XP_036019505
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,108,132 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163620   ⟹   XP_036019513
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,002,208 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163621   ⟹   XP_036019514
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,002,208 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036163624   ⟹   XP_036019517
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39173,949,391 - 74,002,208 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001276824 (Get FASTA)   NCBI Sequence Viewer  
  NP_001400716 (Get FASTA)   NCBI Sequence Viewer  
  NP_001400717 (Get FASTA)   NCBI Sequence Viewer  
  NP_001400718 (Get FASTA)   NCBI Sequence Viewer  
  NP_001400719 (Get FASTA)   NCBI Sequence Viewer  
  NP_001400720 (Get FASTA)   NCBI Sequence Viewer  
  NP_082160 (Get FASTA)   NCBI Sequence Viewer  
  XP_006495930 (Get FASTA)   NCBI Sequence Viewer  
  XP_006495934 (Get FASTA)   NCBI Sequence Viewer  
  XP_006495935 (Get FASTA)   NCBI Sequence Viewer  
  XP_006495936 (Get FASTA)   NCBI Sequence Viewer  
  XP_006495937 (Get FASTA)   NCBI Sequence Viewer  
  XP_006495938 (Get FASTA)   NCBI Sequence Viewer  
  XP_006495940 (Get FASTA)   NCBI Sequence Viewer  
  XP_006495941 (Get FASTA)   NCBI Sequence Viewer  
  XP_006495942 (Get FASTA)   NCBI Sequence Viewer  
  XP_006495943 (Get FASTA)   NCBI Sequence Viewer  
  XP_006495944 (Get FASTA)   NCBI Sequence Viewer  
  XP_006495945 (Get FASTA)   NCBI Sequence Viewer  
  XP_006495946 (Get FASTA)   NCBI Sequence Viewer  
  XP_011236778 (Get FASTA)   NCBI Sequence Viewer  
  XP_011236779 (Get FASTA)   NCBI Sequence Viewer  
  XP_017175336 (Get FASTA)   NCBI Sequence Viewer  
  XP_017175337 (Get FASTA)   NCBI Sequence Viewer  
  XP_017175342 (Get FASTA)   NCBI Sequence Viewer  
  XP_017175345 (Get FASTA)   NCBI Sequence Viewer  
  XP_017175347 (Get FASTA)   NCBI Sequence Viewer  
  XP_017175348 (Get FASTA)   NCBI Sequence Viewer  
  XP_017175349 (Get FASTA)   NCBI Sequence Viewer  
  XP_017175351 (Get FASTA)   NCBI Sequence Viewer  
  XP_017175352 (Get FASTA)   NCBI Sequence Viewer  
  XP_017175353 (Get FASTA)   NCBI Sequence Viewer  
  XP_017175354 (Get FASTA)   NCBI Sequence Viewer  
  XP_017175355 (Get FASTA)   NCBI Sequence Viewer  
  XP_030108842 (Get FASTA)   NCBI Sequence Viewer  
  XP_030108843 (Get FASTA)   NCBI Sequence Viewer  
  XP_030108844 (Get FASTA)   NCBI Sequence Viewer  
  XP_030108845 (Get FASTA)   NCBI Sequence Viewer  
  XP_030108846 (Get FASTA)   NCBI Sequence Viewer  
  XP_030108847 (Get FASTA)   NCBI Sequence Viewer  
  XP_030108848 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019471 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019481 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019502 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019505 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019513 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019514 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019517 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH52740 (Get FASTA)   NCBI Sequence Viewer  
  AAH55076 (Get FASTA)   NCBI Sequence Viewer  
  BAB23539 (Get FASTA)   NCBI Sequence Viewer  
  BAC35268 (Get FASTA)   NCBI Sequence Viewer  
  BAC39825 (Get FASTA)   NCBI Sequence Viewer  
  BAE33792 (Get FASTA)   NCBI Sequence Viewer  
  E9Q0S6 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000127715
  ENSMUSP00000127715.2
  ENSMUSP00000139616.2
  ENSMUSP00000139721.2
  ENSMUSP00000139844.2
  ENSMUSP00000140094
  ENSMUSP00000140094.2
  ENSMUSP00000140254
  ENSMUSP00000140254.2
  ENSMUSP00000140317
  ENSMUSP00000140317.2
  ENSMUSP00000140448.2
  ENSMUSP00000140771
  ENSMUSP00000140771.2
  ENSMUSP00000140837.2
  ENSMUSP00000140878.2
  ENSMUSP00000140991.2
  ENSMUSP00000148638.2
  ENSMUSP00000159329.2
RefSeq Acc Id: NP_082160   ⟸   NM_027884
- Peptide Label: isoform a
- UniProtKB: E9Q0S6 (UniProtKB/TrEMBL),   A0A1D5RM59 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006495934   ⟸   XM_006495871
- Peptide Label: isoform X7
- UniProtKB: A0A1D5RM59 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006495930   ⟸   XM_006495867
- Peptide Label: isoform X1
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006495941   ⟸   XM_006495878
- Peptide Label: isoform X24
- UniProtKB: A0A087WQ94 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006495935   ⟸   XM_006495872
- Peptide Label: isoform X16
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006495938   ⟸   XM_006495875
- Peptide Label: isoform X20
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006495937   ⟸   XM_006495874
- Peptide Label: isoform X19
- UniProtKB: A0A087WQ94 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006495940   ⟸   XM_006495877
- Peptide Label: isoform X24
- UniProtKB: A0A087WQ94 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006495943   ⟸   XM_006495880
- Peptide Label: isoform X24
- UniProtKB: A0A087WQ94 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006495936   ⟸   XM_006495873
- Peptide Label: isoform X18
- UniProtKB: A0A087WQ94 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006495942   ⟸   XM_006495879
- Peptide Label: isoform X24
- UniProtKB: A0A087WQ94 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006495944   ⟸   XM_006495881
- Peptide Label: isoform X24
- UniProtKB: A0A087WQ94 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006495945   ⟸   XM_006495882
- Peptide Label: isoform X24
- UniProtKB: A0A087WQ94 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006495946   ⟸   XM_006495883
- Peptide Label: isoform X27
- Sequence:
RefSeq Acc Id: NP_001276824   ⟸   NM_001289895
- Peptide Label: isoform b
- UniProtKB: A0A087WQS0 (UniProtKB/TrEMBL),   A0A1D5RM59 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011236778   ⟸   XM_011238476
- Peptide Label: isoform X24
- UniProtKB: A0A087WQ94 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011236779   ⟸   XM_011238477
- Peptide Label: isoform X24
- UniProtKB: A0A087WQ94 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175353   ⟸   XM_017319864
- Peptide Label: isoform X15
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175349   ⟸   XM_017319860
- Peptide Label: isoform X12
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175348   ⟸   XM_017319859
- Peptide Label: isoform X10
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175336   ⟸   XM_017319847
- Peptide Label: isoform X2
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175355   ⟸   XM_017319866
- Peptide Label: isoform X23
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175354   ⟸   XM_017319865
- Peptide Label: isoform X21
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175352   ⟸   XM_017319863
- Peptide Label: isoform X14
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175347   ⟸   XM_017319858
- Peptide Label: isoform X9
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175345   ⟸   XM_017319856
- Peptide Label: isoform X6
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175337   ⟸   XM_017319848
- Peptide Label: isoform X3
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175342   ⟸   XM_017319853
- Peptide Label: isoform X5
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175351   ⟸   XM_017319862
- Peptide Label: isoform X13
- UniProtKB: A0A6I8MWZ2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030108842   ⟸   XM_030252982
- Peptide Label: isoform X8
- UniProtKB: A0A1D5RM59 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030108844   ⟸   XM_030252984
- Peptide Label: isoform X22
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030108843   ⟸   XM_030252983
- Peptide Label: isoform X17
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030108845   ⟸   XM_030252985
- Peptide Label: isoform X25
- UniProtKB: A0A087WQ94 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030108848   ⟸   XM_030252988
- Peptide Label: isoform X33
RefSeq Acc Id: XP_030108847   ⟸   XM_030252987
- Peptide Label: isoform X31
RefSeq Acc Id: XP_030108846   ⟸   XM_030252986
- Peptide Label: isoform X29
RefSeq Acc Id: ENSMUSP00000140317   ⟸   ENSMUST00000191104
RefSeq Acc Id: ENSMUSP00000140878   ⟸   ENSMUST00000191204
RefSeq Acc Id: ENSMUSP00000140991   ⟸   ENSMUST00000191367
RefSeq Acc Id: ENSMUSP00000159329   ⟸   ENSMUST00000239451
RefSeq Acc Id: ENSMUSP00000140771   ⟸   ENSMUST00000185331
RefSeq Acc Id: ENSMUSP00000140094   ⟸   ENSMUST00000185702
RefSeq Acc Id: ENSMUSP00000140448   ⟸   ENSMUST00000190389
RefSeq Acc Id: ENSMUSP00000140837   ⟸   ENSMUST00000188208
RefSeq Acc Id: ENSMUSP00000140254   ⟸   ENSMUST00000187584
RefSeq Acc Id: ENSMUSP00000139844   ⟸   ENSMUST00000187691
RefSeq Acc Id: ENSMUSP00000139616   ⟸   ENSMUST00000187281
RefSeq Acc Id: ENSMUSP00000148638   ⟸   ENSMUST00000212888
RefSeq Acc Id: ENSMUSP00000127715   ⟸   ENSMUST00000169786
RefSeq Acc Id: ENSMUSP00000139721   ⟸   ENSMUST00000189228
RefSeq Acc Id: XP_036019471   ⟸   XM_036163578
- Peptide Label: isoform X4
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036019481   ⟸   XM_036163588
- Peptide Label: isoform X11
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036019505   ⟸   XM_036163612
- Peptide Label: isoform X26
- UniProtKB: A0A087WQ94 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036019502   ⟸   XM_036163609
- Peptide Label: isoform X24
- UniProtKB: A0A087WQ94 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036019517   ⟸   XM_036163624
- Peptide Label: isoform X32
RefSeq Acc Id: XP_036019514   ⟸   XM_036163621
- Peptide Label: isoform X30
RefSeq Acc Id: XP_036019513   ⟸   XM_036163620
- Peptide Label: isoform X28
RefSeq Acc Id: NP_001400716   ⟸   NM_001413787
- Peptide Label: isoform c
- UniProtKB: A0A087WQM0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001400718   ⟸   NM_001413789
- Peptide Label: isoform d
- UniProtKB: A0A087WQ94 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001400720   ⟸   NM_001413791
- Peptide Label: isoform f
- UniProtKB: A0A087WRU0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001400719   ⟸   NM_001413790
- Peptide Label: isoform e
- UniProtKB: A0A087WRU0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001400717   ⟸   NM_001413788
- Peptide Label: isoform d
- UniProtKB: A0A087WQ94 (UniProtKB/TrEMBL)
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-E9Q0S6-F1-model_v2 AlphaFold E9Q0S6 1-1888 view protein structure

Promoters
RGD ID:6874040
Promoter ID:EPDNEW_M471
Type:multiple initiation site
Name:Tns1_3
Description:Mus musculus tensin 1 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M472  EPDNEW_M473  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38173,928,513 - 73,928,573EPDNEW
RGD ID:6818623
Promoter ID:MM_KWN:1143
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver,   Lung
Transcripts:UC007BLE.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36173,974,741 - 73,975,927 (-)MPROMDB
RGD ID:6848558
Promoter ID:MM_TRO:267
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day3,   3T3L1_Day4,   Kidney,   Lung
Transcripts:MTR003165.1.1099.15,   MTR003165.1.1099.16,   MTR003165.1.1099.19
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36173,976,869 - 73,977,369 (-)MPROMDB
RGD ID:6818624
Promoter ID:MM_KWN:1144
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day3,   3T3L1_Day4,   Kidney,   Liver,   Lung,   MEF_B6
Transcripts:UC007BLF.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36173,983,441 - 73,984,832 (-)MPROMDB
RGD ID:6818621
Promoter ID:MM_KWN:1145
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day4,   Kidney,   Liver,   Lung
Transcripts:ENSMUST00000068832,   UC007BLG.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36173,988,191 - 73,989,497 (-)MPROMDB
RGD ID:6874042
Promoter ID:EPDNEW_M472
Type:initiation region
Name:Tns1_1
Description:Mus musculus tensin 1 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M471  EPDNEW_M473  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38173,998,463 - 73,998,523EPDNEW
RGD ID:6846656
Promoter ID:MM_ACW:1271
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:TNS1.JSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36174,009,336 - 74,009,836 (-)MPROMDB
RGD ID:6817319
Promoter ID:MM_KWN:1146
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   Kidney,   Lung,   MEF_B6
Transcripts:UC007BLH.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36174,032,716 - 74,034,222 (-)MPROMDB
RGD ID:6817315
Promoter ID:MM_KWN:1147
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day4,   Brain,   Kidney,   Liver,   Lung,   MEF_B6
Transcripts:UC007BLJ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36174,041,621 - 74,045,122 (-)MPROMDB
RGD ID:6818617
Promoter ID:MM_KWN:1148
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day4,   BoneMarrow_0Hour,   Brain,   Kidney,   Liver,   Lung,   MEF_B4
Transcripts:ENSMUST00000050681
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36174,044,911 - 74,045,862 (-)MPROMDB
RGD ID:6846659
Promoter ID:MM_ACW:1274
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver,   Lung
Transcripts:TNS1.LSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36174,047,884 - 74,048,384 (-)MPROMDB
RGD ID:6846658
Promoter ID:MM_ACW:1275
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:TNS1.FSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36174,062,866 - 74,063,442 (-)MPROMDB
RGD ID:6846662
Promoter ID:MM_ACW:1276
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:TNS1.DSEP07,   TNS1.USEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36174,083,236 - 74,083,736 (-)MPROMDB
RGD ID:6874044
Promoter ID:EPDNEW_M473
Type:initiation region
Name:Tns1_2
Description:Mus musculus tensin 1 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M471  EPDNEW_M472  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38174,124,488 - 74,124,548EPDNEW
RGD ID:6846661
Promoter ID:MM_ACW:1281
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day3
Transcripts:TNS1.TSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36174,137,556 - 74,138,056 (-)MPROMDB
RGD ID:6818622
Promoter ID:MM_KWN:1149
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver
Transcripts:NM_027884
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36174,170,709 - 74,171,209 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:104552 AgrOrtholog
Ensembl Genes ENSMUSG00000055322 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000169786 ENTREZGENE
  ENSMUST00000169786.8 UniProtKB/Swiss-Prot
  ENSMUST00000185331 ENTREZGENE
  ENSMUST00000185331.7 UniProtKB/TrEMBL
  ENSMUST00000185702 ENTREZGENE
  ENSMUST00000185702.7 UniProtKB/TrEMBL
  ENSMUST00000187281.7 UniProtKB/TrEMBL
  ENSMUST00000187584 ENTREZGENE
  ENSMUST00000187584.7 UniProtKB/TrEMBL
  ENSMUST00000187691.7 UniProtKB/TrEMBL
  ENSMUST00000188208.2 UniProtKB/TrEMBL
  ENSMUST00000189228.2 UniProtKB/TrEMBL
  ENSMUST00000190389.7 UniProtKB/TrEMBL
  ENSMUST00000191104 ENTREZGENE
  ENSMUST00000191104.7 UniProtKB/TrEMBL
  ENSMUST00000191204.7 UniProtKB/TrEMBL
  ENSMUST00000191367.2 UniProtKB/TrEMBL
  ENSMUST00000212888.2 UniProtKB/TrEMBL
  ENSMUST00000239451.2 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.40.1110 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.505.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.60.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.90.190.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro C1-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PE/DAG-bd UniProtKB/Swiss-Prot
  PH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot-tyrosine_phosphatase-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_Kinase_C-like_PE/DAG-bd UniProtKB/TrEMBL
  PTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTB/PI_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tensin-like_SH2 UniProtKB/Swiss-Prot
  Tensin_C2-dom UniProtKB/Swiss-Prot
  Tensin_like_SH2 UniProtKB/TrEMBL
  Tensin_lipid_phosphatase_dom UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
  Tensin_phosphatase_C2-dom UniProtKB/TrEMBL
  Tensin_PTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_Pase_cat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:21961 UniProtKB/Swiss-Prot
MGD MGI:104552 ENTREZGENE
NCBI Gene 21961 ENTREZGENE
PANTHER TENSIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TENSIN-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam C1_1 UniProtKB/TrEMBL
  PTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTEN_C2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Tns1 PhenoGen
PROSITE C2_TENSIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PPASE_TENSIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_DAG_PE_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_DAG_PE_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART PTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTEN_C2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTPc_motif UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP (Phosphotyrosine protein) phosphatases II UniProtKB/Swiss-Prot
  C2 domain (Calcium/lipid-binding domain, CaLB) UniProtKB/Swiss-Prot
  Cysteine-rich domain UniProtKB/Swiss-Prot
  PH domain-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2 domain UniProtKB/Swiss-Prot
  SSF49562 UniProtKB/TrEMBL
  SSF52799 UniProtKB/TrEMBL
  SSF55550 UniProtKB/TrEMBL
  SSF57889 UniProtKB/TrEMBL
UniProt A0A087WP40_MOUSE UniProtKB/TrEMBL
  A0A087WPC7_MOUSE UniProtKB/TrEMBL
  A0A087WQ94 ENTREZGENE, UniProtKB/TrEMBL
  A0A087WQM0 ENTREZGENE, UniProtKB/TrEMBL
  A0A087WQS0 ENTREZGENE, UniProtKB/TrEMBL
  A0A087WR29_MOUSE UniProtKB/TrEMBL
  A0A087WRU0 ENTREZGENE, UniProtKB/TrEMBL
  A0A087WRZ8_MOUSE UniProtKB/TrEMBL
  A0A087WS32_MOUSE UniProtKB/TrEMBL
  A0A087WSC8_MOUSE UniProtKB/TrEMBL
  A0A1D5RM59 ENTREZGENE, UniProtKB/TrEMBL
  A0A6I8MWZ2 ENTREZGENE, UniProtKB/TrEMBL
  E9Q0S6 ENTREZGENE
  Q3U0Q9_MOUSE UniProtKB/TrEMBL
  Q7TPM8_MOUSE UniProtKB/TrEMBL
  Q7TSV1_MOUSE UniProtKB/TrEMBL
  Q8C323_MOUSE UniProtKB/TrEMBL
  Q8C6V6_MOUSE UniProtKB/TrEMBL
  Q9DBT6_MOUSE UniProtKB/TrEMBL
  TENS1_MOUSE UniProtKB/Swiss-Prot