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Gene: Flacc1 (flagellum associated containing coiled-coil domains 1) Mus musculus

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Symbol:

Flacc1

Name:

flagellum associated containing coiled-coil domains 1

RGD ID:

1616647

MGI Page

MGI

Description:

Located in cytoplasmic vesicle and outer dense fiber. Orthologous to human FLACC1 (flagellum associated containing coiled-coil domains 1).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

4933405P16Rik; 4933425F06Rik; Als2; Als2cr12; amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12; amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human); amyotrophic lateral sclerosis 2 chromosomal region candidate gene 12 protein homolog; amyotrophic lateral sclerosis 2 chromosome region 12; flagellum-associated coiled-coil domain-containing protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	58,696,085 - 58,735,167 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	58,686,062 - 58,735,148 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	58,656,926 - 58,696,008 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	58,646,903 - 58,695,989 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	58,714,961 - 58,752,833 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	58,602,667 - 58,640,503 (-)	NCBI		MGSCv36	mm8
Celera	1	59,177,077 - 59,214,991 (-)	NCBI		Celera
Cytogenetic Map	1	C1.3	NCBI
cM Map	1	29.15	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Flacc1	Mouse	autoimmune lymphoproliferative syndrome type 2B		ISO	FLACC1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autoimmune lymphoproliferative syndrome type 2B	ClinVar	PMID:11343122 more ...
Flacc1	Mouse	Autoimmune Lymphoproliferative Syndrome, Type V		ISO	FLACC1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autoimmune lymphoproliferative syndrome type V	ClinVar	PMID:11343122 more ...
Flacc1	Mouse	common variable immunodeficiency 1		ISO	FLACC1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Immunodeficiency more ...	ClinVar	PMID:11343122 more ...
Flacc1	Mouse	Neurodevelopmental Disorders		ISO	FLACC1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868
Flacc1	Mouse	Pulmonary Arterial Hypertension		ISO	FLACC1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Pulmonary arterial hypertension	ClinVar	PMID:32581362

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Flacc1	Mouse	anthracosis		ISO	FLACC1 (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:29394417
Flacc1	Mouse	Breast Neoplasms		ISO	FLACC1 (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:29915430

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Flacc1	Mouse	(1->4)-beta-D-glucan	multiple interactions	EXP		6480464	[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of ALS2CR12 mRNA	CTD	PMID:36331819
Flacc1	Mouse	2,3,7,8-tetrachlorodibenzodioxine	increases expression	ISO	Flacc1 (Rattus norvegicus)	6480464	Tetrachlorodibenzodioxin results in increased expression of FLACC1 mRNA	CTD	PMID:33387578
Flacc1	Mouse	6-propyl-2-thiouracil	increases expression	ISO	Flacc1 (Rattus norvegicus)	6480464	Propylthiouracil results in increased expression of FLACC1 mRNA	CTD	PMID:24780913
Flacc1	Mouse	acrylamide	decreases expression	EXP		6480464	Acrylamide results in decreased expression of FLACC1 mRNA	CTD	PMID:30807115
Flacc1	Mouse	aristolochic acid A	increases expression	ISO	FLACC1 (Homo sapiens)	6480464	aristolochic acid I results in increased expression of FLACC1 mRNA	CTD	PMID:33212167
Flacc1	Mouse	benzo[a]pyrene	increases methylation	ISO	FLACC1 (Homo sapiens)	6480464	Benzo(a)pyrene results in increased methylation of FLACC1 promoter	CTD	PMID:27901495
Flacc1	Mouse	bis(2-ethylhexyl) phthalate	multiple interactions	EXP		6480464	[Streptozocin co-treated with Dietary Fats co-treated with Diethylhexyl Phthalate] results in increased expression of FLACC1 mRNA	CTD	PMID:33484791
Flacc1	Mouse	bis(2-ethylhexyl) phthalate	increases expression	EXP		6480464	Diethylhexyl Phthalate results in increased expression of ALS2CR12 mRNA	CTD	PMID:34319233
Flacc1	Mouse	bisphenol A	decreases expression	ISO	Flacc1 (Rattus norvegicus)	6480464	bisphenol A results in decreased expression of FLACC1 mRNA	CTD	PMID:25181051 more ...
Flacc1	Mouse	cadmium atom	decreases expression	ISO	FLACC1 (Homo sapiens)	6480464	Cadmium results in decreased expression of FLACC1 mRNA	CTD	PMID:24376830
Flacc1	Mouse	carbon nanotube	decreases expression	EXP		6480464	Nanotubes and Carbon results in decreased expression of FLACC1 mRNA	CTD	PMID:25620056
Flacc1	Mouse	CGP 52608	multiple interactions	ISO	FLACC1 (Homo sapiens)	6480464	CGP 52608 promotes the reaction [RORA protein binds to ALS2CR12 gene]	CTD	PMID:28238834
Flacc1	Mouse	cisplatin	increases expression	ISO	FLACC1 (Homo sapiens)	6480464	Cisplatin results in increased expression of FLACC1 mRNA	CTD	PMID:27392435
Flacc1	Mouse	dimethylarsinic acid	multiple interactions	EXP		6480464	[sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of FLACC1 mRNA	CTD	PMID:34876320
Flacc1	Mouse	doxorubicin	decreases expression	ISO	FLACC1 (Homo sapiens)	6480464	Doxorubicin results in decreased expression of FLACC1 mRNA	CTD	PMID:29803840
Flacc1	Mouse	flutamide	decreases expression	ISO	Flacc1 (Rattus norvegicus)	6480464	Flutamide results in decreased expression of FLACC1 mRNA	CTD	PMID:24793618
Flacc1	Mouse	gentamycin	increases expression	ISO	Flacc1 (Rattus norvegicus)	6480464	Gentamicins results in increased expression of FLACC1 mRNA	CTD	PMID:33387578
Flacc1	Mouse	GW 4064	increases expression	EXP		6480464	GW 4064 results in increased expression of FLACC1 mRNA	CTD	PMID:26655953
Flacc1	Mouse	inulin	multiple interactions	EXP		6480464	[perfluorooctane sulfonic acid co-treated with Inulin] results in increased expression of ALS2CR12 mRNA	CTD	PMID:36331819
Flacc1	Mouse	methylarsonic acid	multiple interactions	EXP		6480464	[sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of FLACC1 mRNA	CTD	PMID:34876320
Flacc1	Mouse	N,N-diethyl-m-toluamide	multiple interactions	ISO	Flacc1 (Rattus norvegicus)	6480464	[Permethrin co-treated with DEET] results in increased methylation of FLACC1 gene	CTD	PMID:33148267
Flacc1	Mouse	ozone	multiple interactions	EXP		6480464	[Air Pollutants results in increased abundance of [Ozone co-treated with Soot]] which results in increased expression of FLACC1 mRNA and [Air Pollutants results in increased abundance of Ozone] which results in increased expression of FLACC1 mRNA	CTD	PMID:34911549
Flacc1	Mouse	perfluorooctane-1-sulfonic acid	decreases expression	ISO	FLACC1 (Homo sapiens)	6480464	perfluorooctane sulfonic acid results in decreased expression of FLACC1 mRNA	CTD	PMID:27153767
Flacc1	Mouse	perfluorooctane-1-sulfonic acid	multiple interactions	EXP		6480464	[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of ALS2CR12 mRNA more ...	CTD	PMID:36331819
Flacc1	Mouse	permethrin	multiple interactions	ISO	Flacc1 (Rattus norvegicus)	6480464	[Permethrin co-treated with DEET] results in increased methylation of FLACC1 gene	CTD	PMID:33148267
Flacc1	Mouse	phenobarbital	multiple interactions	EXP		6480464	NR1I3 protein affects the reaction [Phenobarbital results in increased expression of FLACC1 mRNA]	CTD	PMID:19482888
Flacc1	Mouse	phenobarbital	increases expression	EXP		6480464	Phenobarbital results in increased expression of FLACC1 mRNA	CTD	PMID:19482888
Flacc1	Mouse	pirinixic acid	increases expression	EXP		6480464	pirinixic acid results in increased expression of FLACC1 mRNA	CTD	PMID:18301758
Flacc1	Mouse	pravastatin	increases expression	ISO	Flacc1 (Rattus norvegicus)	6480464	Pravastatin results in increased expression of FLACC1 mRNA	CTD	PMID:27225895
Flacc1	Mouse	pravastatin	increases expression	EXP		6480464	Pravastatin results in increased expression of FLACC1 mRNA	CTD	PMID:27225895
Flacc1	Mouse	sodium arsenate	multiple interactions	EXP		6480464	[sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of FLACC1 mRNA	CTD	PMID:34876320
Flacc1	Mouse	sodium arsenite	decreases expression	EXP		6480464	sodium arsenite results in decreased expression of FLACC1 mRNA	CTD	PMID:37682722
Flacc1	Mouse	sodium arsenite	multiple interactions	EXP		6480464	[sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of FLACC1 mRNA	CTD	PMID:34876320
Flacc1	Mouse	sotorasib	multiple interactions	ISO	FLACC1 (Homo sapiens)	6480464	[sotorasib co-treated with trametinib co-treated with NVP-BKM120] results in decreased expression of FLACC1 mRNA	CTD	PMID:36139627
Flacc1	Mouse	streptozocin	multiple interactions	EXP		6480464	[Streptozocin co-treated with Dietary Fats co-treated with Diethylhexyl Phthalate] results in increased expression of FLACC1 mRNA	CTD	PMID:33484791
Flacc1	Mouse	tetrachloromethane	decreases expression	ISO	Flacc1 (Rattus norvegicus)	6480464	Carbon Tetrachloride results in decreased expression of FLACC1 mRNA	CTD	PMID:30723492
Flacc1	Mouse	thioacetamide	decreases expression	ISO	Flacc1 (Rattus norvegicus)	6480464	Thioacetamide results in decreased expression of FLACC1 mRNA	CTD	PMID:34492290
Flacc1	Mouse	trametinib	multiple interactions	ISO	FLACC1 (Homo sapiens)	6480464	[sotorasib co-treated with trametinib co-treated with NVP-BKM120] results in decreased expression of FLACC1 mRNA	CTD	PMID:36139627
Flacc1	Mouse	trichloroethene	increases expression	ISO	Flacc1 (Rattus norvegicus)	6480464	Trichloroethylene results in increased expression of FLACC1 mRNA	CTD	PMID:33387578
Flacc1	Mouse	trichostatin A	affects expression	ISO	FLACC1 (Homo sapiens)	6480464	trichostatin A affects the expression of FLACC1 mRNA	CTD	PMID:28542535
Flacc1	Mouse	triphenyl phosphate	affects expression	ISO	FLACC1 (Homo sapiens)	6480464	triphenyl phosphate affects the expression of ALS2CR12 mRNA	CTD	PMID:37042841
Flacc1	Mouse	troglitazone	increases expression	EXP		6480464	Troglitazone results in increased expression of FLACC1 mRNA	CTD	PMID:28973697
Flacc1	Mouse	vinclozolin	increases methylation	ISO	Flacc1 (Rattus norvegicus)	6480464	vinclozolin results in increased methylation of FLACC1 gene	CTD	PMID:31079544
Flacc1	Mouse	zaragozic acid A	decreases expression	ISO	Flacc1 (Rattus norvegicus)	6480464	squalestatin 1 results in decreased expression of FLACC1 mRNA	CTD	PMID:27225895
Flacc1	Mouse	zaragozic acid A	decreases expression	EXP		6480464	squalestatin 1 results in decreased expression of FLACC1 mRNA	CTD	PMID:27225895

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Flacc1	Mouse	biological_process	involved_in	ND		2290270		MGI	GO_REF:0000015

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Flacc1	Mouse	cytoplasm	located_in	IDA		2290270	PMID:17662146 and PMID:21402173	MGI	PMID:17662146 and PMID:21402173
Flacc1	Mouse	cytoplasm	is_active_in	IBA	PANTHER:PTN004554754 and MGI:1918359	2290270		GO_Central	GO_REF:0000033
Flacc1	Mouse	cytoplasmic vesicle	located_in	IDA		2290270	PMID:21402173	UniProt	PMID:21402173
Flacc1	Mouse	outer dense fiber	located_in	IDA		2290270	PMID:21402173	UniProt	PMID:21402173
Flacc1	Mouse	sperm flagellum	located_in	IDA		2290270	PMID:21402173	UniProt	PMID:21402173

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Flacc1	Mouse	molecular_function	enables	ND		2290270		MGI	GO_REF:0000015
Flacc1	Mouse	protein binding	enables	ISO	UniProtKB:P46108	9068941	PMID:26871637	IntAct	PMID:26871637
Flacc1	Mouse	protein binding	enables	ISO	UniProtKB:O00204 more ...	9068941	PMID:25416956	IntAct	PMID:25416956
Flacc1	Mouse	protein binding	enables	ISO	UniProtKB:O00204 more ...	9068941	PMID:32296183	IntAct	PMID:32296183
Flacc1	Mouse	protein binding	enables	ISO	UniProtKB:O00204	9068941	PMID:16189514 more ...	IntAct	PMID:16189514 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Flacc1	Mouse	abnormal kidney morphology		IEA		5509061		MGI
Flacc1	Mouse	abnormal skin morphology		IEA		5509061		MGI
Flacc1	Mouse	small kidney		IEA		5509061		MGI

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:16141072	PMID:16141073	PMID:17662146	PMID:21402173	PMID:21873635	PMID:23375831
PMID:32325033	PMID:33156557

Flacc1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	58,696,085 - 58,735,167 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	58,686,062 - 58,735,148 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	58,656,926 - 58,696,008 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	58,646,903 - 58,695,989 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	58,714,961 - 58,752,833 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	58,602,667 - 58,640,503 (-)	NCBI		MGSCv36	mm8
Celera	1	59,177,077 - 59,214,991 (-)	NCBI		Celera
Cytogenetic Map	1	C1.3	NCBI
cM Map	1	29.15	NCBI

FLACC1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	201,288,271 - 201,364,289 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	201,288,271 - 201,357,398 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	202,152,994 - 202,222,068 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	201,861,230 - 201,924,421 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	201,978,499 - 202,041,682	NCBI
Celera	2	195,904,962 - 195,973,949 (-)	NCBI		Celera
Cytogenetic Map	2	q33.1	NCBI
HuRef	2	194,001,532 - 194,070,517 (-)	NCBI		HuRef
CHM1_1	2	202,159,167 - 202,228,121 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	201,768,929 - 201,844,975 (-)	NCBI		T2T-CHM13v2.0

Flacc1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	67,809,731 - 67,837,793 (-)	NCBI		GRCr8
mRatBN7.2	9	60,315,581 - 60,343,692 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	60,315,582 - 60,343,648 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	68,811,213 - 68,839,397 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	73,927,173 - 73,955,357 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	72,245,430 - 72,273,623 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	65,665,663 - 65,693,822 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	65,665,664 - 65,693,822 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	65,472,507 - 65,500,565 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	57,441,360 - 57,469,795 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	57,588,342 - 57,616,777 (-)	NCBI
Celera	9	57,756,584 - 57,784,074 (-)	NCBI		Celera
Cytogenetic Map	9	q31	NCBI

Flacc1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	264,980 - 321,484 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955403	264,969 - 321,370 (+)	NCBI	ChiLan1.0	ChiLan1.0

FLACC1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	103,908,781 - 103,987,516 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	103,923,780 - 103,995,587 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	88,541,496 - 88,618,269 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	206,697,119 - 206,766,071 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	206,697,119 - 206,766,071 (-)	Ensembl	panpan1.1		panPan2

FLACC1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	10,404,512 - 10,438,102 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	10,404,744 - 10,430,950 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	11,288,310 - 11,321,877 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	10,309,120 - 10,342,914 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	10,309,338 - 10,342,912 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	10,289,940 - 10,320,708 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	10,268,927 - 10,302,564 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	10,262,253 - 10,296,036 (-)	NCBI		UU_Cfam_GSD_1.0

Flacc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	158,629,874 - 158,661,225 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936726	600,420 - 625,853 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936726	600,213 - 631,513 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FLACC1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	104,942,349 - 104,985,722 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	104,950,504 - 104,986,350 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	116,343,375 - 116,378,479 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FLACC1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	86,945,622 - 87,009,252 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	86,946,674 - 87,007,579 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	112,406,707 - 112,477,556 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Flacc1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624899	389,719 - 416,603 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624899	361,645 - 416,374 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Flacc1
2713 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	122
Count of miRNA genes:	117
Interacting mature miRNAs:	117
Transcripts:	ENSMUST00000055313
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
11039528	Ccc3_m	colitis susceptibility in the Collaborative Cross 3 (mouse)					1	3680142	195051546	Mouse
12910788	Pwgrq9_m	post-weaning growth rate QTL 9 (mouse)					1	40868008	67270256	Mouse
18182931	Metl1_m	metabolite locus 1, pyridoxate (mouse)					1	41275399	75275399	Mouse
12910786	Pwgrq10_m	post-weaning growth rate QTL 10 (mouse)					1	40868008	67270256	Mouse
13824984	Twq5_m	testis weight QTL 5 (mouse)					1	3069992	184732197	Mouse
1357721	Sle17_m	systematic lupus erythematosus susceptibility 17 (mouse)			Not determined		1	39132808	126445310	Mouse
1357824	Estoq4_m	embryo survival total QTL 4 (mouse)			Not determined		1	34760138	73976915	Mouse
14746998	Mancz1_m	mandible centroid size 1 (mouse)					1	57941351	91941351	Mouse
1300746	Skl1_m	skeletal size (tail length) 1 (mouse)			Not determined		1	57991977	91992080	Mouse
4141724	Idd5.1_m	insulin dependent diabetes susceptibility 5.1 (mouse)			Not determined			57728276	62946882	Mouse
1357488	Splq3_m	spleen weight QTL 3 (mouse)			Not determined		1	34760138	150193871	Mouse
10043965	Obq24_m	obesity QTL 24 (mouse)			Not determined		1	50890216	84890216	Mouse
1301430	Cdcs2_m	cytokine deficiency colitis susceptibility 2 (mouse)			Not determined		1	48892345	82892485	Mouse
1558717	Ses1a_m	salmonella enteritidis susceptibility 1a (mouse)			Not determined		1	56726922	90727077	Mouse
1357759	W3q12_m	weight 3 weeks QTL 12 (mouse)			Not determined		1	34760138	73976915	Mouse
1357753	Kidq2_m	kidney weight QTL 2 (mouse)			Not determined		1	34760138	150193871	Mouse
1301667	Lxw5_m	lupus BXSB x NZW 5 (mouse)			Not determined		1	58549191	92549443	Mouse
1558822	Vas1_m	autoimmune vasitis resistance 1 (mouse)			Not determined		1	48889006	82889210	Mouse
1301670	Ssta1_m	susceptibility to Salmonella typhimurium antigens 1 (mouse)			Not determined		1	45946755	79946882	Mouse
1357475	w3q13_m	weight 3 weeks QTL 13 (mouse)			Not determined		1	23109591	73976915	Mouse
1357741	Nidd5k_m	Nidd5 on KK-A<y> (mouse)			Not determined		1	55974948	89975057	Mouse
1301162	Skull1_m	skull morphology 1 (mouse)			Not determined		1	57991977	91992080	Mouse
4142467	Wbcq1_m	white blood cell quantitative locus 1 (mouse)			Not determined		1	56266214	90266360	Mouse
1301166	Thypr2_m	thymocyte proliferative response 2 (mouse)			Not determined		1	41273124	75273271	Mouse
1301933	Insq6_m	insulin QTL 6 (mouse)			Not determined		1	56726922	90727077	Mouse
1357524	W6q14_m	weight 6 weeks QTL 14 (mouse)			Not determined		1	34760138	73976915	Mouse
1301714	Vertcling_m	vertical clinging (mouse)			Not determined		1	42938031	76938167	Mouse
4141305	Tgq9_m	triglyceride QTL 9 (mouse)			Not determined			51421605	85421605	Mouse
1357651	Lgq5_m	late growth QTL 5 (mouse)			Not determined		1	34760138	73976915	Mouse
11100001	Col4a1m1_m	collagen, type IV, alpha 1 modifier 1 (mouse)					1	25550191	62946882	Mouse
1301211	Bbaa11_m	B.burgdorferi-associated arthritis 11 (mouse)			Not determined		1	48889006	82889210	Mouse
1301722	Cia9_m	collagen induced arthritis QTL 9 (mouse)			Not determined		1	45783900	189303617	Mouse
1558855	Eae30_m	experimental allergic encephalomyelitis susceptibility 30 (mouse)			Not determined		1	45417773	72975057	Mouse
1301954	Lrnx11_m	learning-contextual 11 (mouse)			Not determined		1	39132808	74516365	Mouse
1357505	Vtbt1_m	vertebral trabecular bone trait 1 (mouse)			Not determined		1	56266214	90266360	Mouse
1357506	W10q6_m	weight 10 weeks QTL 6 (mouse)			Not determined		1	34760138	73976915	Mouse
4141032	Wbcc1_m	white blood cell count 1 (mouse)			Not determined			42259667	76259667	Mouse
1301444	Alcw5_m	alcohol withdrawal 5 (mouse)			Not determined		1	58549191	92549443	Mouse
39128207	Lwq16_m	liver weight QTL 16 (mouse)					1	34760138	73976915	Mouse
1558860	W10q7_m	weight 10 weeks QTL 7 (mouse)			Not determined		1	34760138	150193871	Mouse
4142307	Shali1_m	survival time to hyperoxic acute lung injury 1 (mouse)			Not determined			51964025	70406589	Mouse
12880409	V125Dq1_m	vitamin D active form serum level QTL 1 (mouse)					1	26039160	60039160	Mouse
14747009	Manh49_m	mandible shape 49 (mouse)					1	57941351	91941351	Mouse
1301616	Yaa2_m	Y-linked autoimmune acceleration 2 (mouse)			Not determined		1	46854690	80854839	Mouse
12879917	Shm3_m	sperm head morphology 3 (mouse)					1	44186904	62946882	Mouse
4142291	Aec2_m	autoimmune exocrinopathy 2 (mouse)			Not determined			52457737	182250592	Mouse
1558905	Gct7_m	granulosa cell tumorigenesis 7 (mouse)			Not determined		1	47349894	81350013	Mouse
12910780	Pwgrq11_m	post-weaning growth rate QTL 11 (mouse)					1	40868008	67270256	Mouse
1301225	Sle7_m	systematic lupus erythematosus susceptibility 7 (mouse)			Not determined		1	46854690	80854839	Mouse
1357679	Egrm1_m	early growth rate, maternal effect 1 (mouse)			Not determined		1	57991977	91992080	Mouse

D1Mit75

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	1	58,891,199 - 58,891,369	UniSTS	GRCm38
GRCm38	1	58,691,390 - 58,691,579	UniSTS	GRCm38
MGSCv37	1	58,748,234 - 58,748,423	UniSTS	GRCm37
MGSCv37	1	58,948,043 - 58,948,213	UniSTS	GRCm37
Celera	1	59,210,392 - 59,210,581	UniSTS
Cytogenetic Map	1	C2	UniSTS
Cytogenetic Map	1	C1.3	UniSTS
cM Map	1	32.1	UniSTS
cM Map	1		UniSTS
Whitehead Genetic	1	31.7	UniSTS
Whitehead_YAC	1		UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	NM_001347056	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_175370	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006495613	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006495615	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006495617	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006495618	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017321225	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_030255466	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_865219	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC112968	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC118698	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AI642686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK016678	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK077190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK133373	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC145039	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC145040	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000055313 ⟹ ENSMUSP00000062497

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	58,697,279 - 58,735,112 (-)	Ensembl
GRCm38.p6 Ensembl	1	58,658,120 - 58,695,953 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000185953

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	58,706,054 - 58,735,119 (-)	Ensembl
GRCm38.p6 Ensembl	1	58,666,895 - 58,695,960 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000188772 ⟹ ENSMUSP00000140780

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	58,686,062 - 58,735,148 (-)	Ensembl
GRCm38.p6 Ensembl	1	58,646,903 - 58,695,989 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000188839

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	58,715,355 - 58,730,209 (-)	Ensembl
GRCm38.p6 Ensembl	1	58,676,196 - 58,691,050 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000191252 ⟹ ENSMUSP00000140613

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	58,697,522 - 58,731,601 (-)	Ensembl
GRCm38.p6 Ensembl	1	58,658,363 - 58,692,442 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000191565 ⟹ ENSMUSP00000139420

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	58,697,279 - 58,731,601 (-)	Ensembl
GRCm38.p6 Ensembl	1	58,658,120 - 58,692,442 (-)	Ensembl

RefSeq Acc Id:

NM_001347056 ⟹ NP_001333985

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	58,697,280 - 58,731,604 (-)	NCBI
GRCm38	1	58,658,121 - 58,692,445 (-)	NCBI

Sequence:

show sequence

GAGCCCCTGGCCTAGCAAGACTGCCTTGTACCATGGACCCCAATCCTTTCATCTACTGTACCTGCTGTGACTGCTGCAAATTGGGACAACCAAAGCTAATCAAGACCCCTTATCCACTTCCAAAGCAC
CCCACGGGGAAGTTTAAGCCAGTTTTACCTCCACCAATTTCAAAAGAACACAACTCACTCCTGTCCCAACCAGGAAAATCTACTGTTTCCCCAAGGGACAAGGTCCAGTCAGGAAACACAGAGAGCAG
CAAAGCACCTTCTGAAGTGATTCAAGTGTCACCTGGCTATACACTCATTCGAAATCGAGAACAGATATCAGTCACCTTGGGAGATGAGATGTTCAACAGGAAAAAGCACTTGGAATCAGATGTCTTGA
GCAAAGTCAAATTTTCCAGGACTGATATCATTTCTGACCTTCAGGAGCAAATTGCTGAGTTGATGGCAATAATAGAACAGATGAACAGAGACCAGCAGTCTGCCCTGAAACTGCTCTCCAAAGATCTG
GATCTCCGCTGTTCCAACATGAAGCAGAAGTTTGAAACCGAGAGCAGGGAACTCAAAGAGACTCACAGAGAGGAGCTCGAGAGGTTAGAGAACAACTACAAGGAGGCCCTGAAGGCAGAAAAGGCCTT
GGCCGAAGAGAAACTAGATAAGATGAGCAAGGAATATAAGTATCTGAAGAGTATGTTCCATGTGTTTCAGGATAGCATTTACGAGGAAATGGAAGACAAGTGGCTGAGACGAAAGGCCGAATGGGAGA
AAGATGAGAAGATGGAGCGGGAAAAGATCCTGCTACAACAAAAATGTAGAATAATAAAAAAGTTTGAGTTACAGTCGGAAGAAAAAAAGAAGAAAATGAATGAGTCCATCAGTGCTGTTTCTGATAAC
TTCGCTCGAGAGAAAGAGGAGCTCCTAAGACAACATGATGAAGACATCCTGCAAATACAGGAGCTGAGAAAATCCAAAGAGATCTTGGAGGCTGAGTTGCGGGCACAAGCTACTGTTCTGGAGACCCT
GAACACAAACCTTTTCCAATGCCAGAAAGAACTCGAGAGACAGAAAACTATTGCGGCAAATCTAGAGAAATTGTTCCAGACAAAGCTTGCTGAAGCTGAAGAAAAGCATAAGTACAACATAAAGACCC
CGACAGAAGAAAATAACTGCCTCAGGCAGATGTTAACCACAACCACATATGAGGAAACTTCAGAAGTTTCTGAGAAGTCCTCATCTGCCAGTCCCAACATGTATGAGTCTGACGTTCCTGAACACAAC
AGCAACAAAAAGCAAGCATCGTAGGTAACTAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGGGAAGGCTGAGCTCTTGAGTTGTTCTGTACT
TTTGTCATTTTTCACAATTTGCTTTCTTCCAATGGATAGAAATATTTGAATTCTTATCCTAATTATATCTTGGCTCTCCATTG

hide sequence

RefSeq Acc Id:

NM_175370 ⟹ NP_780579

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	58,697,280 - 58,735,148 (-)	NCBI
GRCm38	1	58,658,121 - 58,695,989 (-)	NCBI
MGSCv37	1	58,714,961 - 58,752,833 (-)	RGD
Celera	1	59,177,077 - 59,214,991 (-)	RGD
cM Map	1		ENTREZGENE

Sequence:

show sequence

GATAAAAGAAACAAACCATCCTGGGGCACAAGTCAGGCTCAGTCAAAGGACTAGCTAGAGGGTGAATTCCTCCTCAAGGGACTTTCAGGAGCCCCTGGCCTAGCAAGACTGCCTTGTACCATGGACCC
CAATCCTTTCATCTACTGTACCTGCTGTGACTGCTGCAAATTGGGACAACCAAAGCTAATCAAGACCCCTTATCCACTTCCAAAGCACCCCACGGGGAAGTTTAAGCCAGTTTTACCTCCACCAATTT
CAAAAGAACACAACTCACTCCTGTCCCAACCAGGAAAATCTACTGTTTCCCCAAGGGACAAGGTCCAGTCAGGAAACACAGAGAGCAGCAAAGCACCTTCTGAAGTGATTCAAGTGTCACCTGGCTAT
ACACTCATTCGAAATCGAGAACAGATATCAGTCACCTTGGGAGATGAGATGTTCAACAGGAAAAAGCACTTGGAATCAGATGTCTTGAGCAAAGTCAAATTTTCCAGGACTGATATCATTTCTGACCT
TCAGGAGCAAATTGCTGAGTTGATGGCAATAATAGAACAGATGAACAGAGACCAGCAGTCTGCCCTGAAACTGCTCTCCAAAGATCTGGATCTCCGCTGTTCCAACATGAAGCAGAAGTTTGAAACCG
AGAGCAGGGAACTCAAAGAGACTCACAGAGAGGAGCTCGAGAGGTTAGAGAACAACTACAAGGAGGCCCTGAAGGCAGAAAAGGCCTTGGCCGAAGAGAAACTAGATAAGATGAGCAAGGAATATAAG
TATCTGAAGAGTATGTTCCATGTGTTTCAGGATAGCATTTACGAGGAAATGGAAGACAAGTGGCTGAGACGAAAGGCCGAATGGGAGAAAGATGAGAAGATGGAGCGGGAAAAGATCCTGCTACAACA
AAAATGTAGAATAATAAAAAAGTTTGAGTTACAGTCGGAAGAAAAAAAGAAGAAAATGAATGAGTCCATCAGTGCTGTTTCTGATAACTTCGCTCGAGAGAAAGAGGAGCTCCTAAGACAACATGATG
AAGACATCCTGCAAATACAGGAGCTGAGAAAATCCAAAGAGATCTTGGAGGCTGAGTTGCGGGCACAAGCTACTGTTCTGGAGACCCTGAACACAAACCTTTTCCAATGCCAGAAAGAACTCGAGAGA
CAGAAAACTATTGCGGCAAATCTAGAGAAATTGTTCCAGACAAAGCTTGCTGAAGCTGAAGAAAAGCATAAGTACAACATAAAGACCCCGACAGAAGAAAATAACTGCCTCAGATGTTAACCACAACC
ACATATGAGGAAACTTCAGAAGTTTCTGAGAAGTCCTCATCTGCCAGTCCCAACATGTATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAGCATCGTAGGTAACTAACTGCTCCTGGGG
CTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGGGAAGGCTGAGCTCTTGAGTTGTTCTGTACTTTTGTCATTTTTCACAATTTGCTTTCTTCCAATGGATAGAAATA
TTTGAATTCTTATCCTAATTATATCTTGGCTCTCCATTG

hide sequence

RefSeq Acc Id:

XM_006495613 ⟹ XP_006495676

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	58,696,085 - 58,735,167 (-)	NCBI
GRCm38	1	58,656,926 - 58,696,008 (-)	NCBI

Sequence:

show sequence

GCCATTGGGTTTCCATAGTGATAAAAGAAACAAACCATCCTGGGGCACAAGTCAGGCTCAGTCA
AAGGACTAGCTAGAGGGTGAATTCCTCCTCAAGGGACTTTCAGGAGCCCCTGGCCTAGCAAGACTGCCTTGTACCATGGACCCCAATCCTTTCATCTACTGTACCTGCTGTGACTGCTGCAAATTGGG
ACAACCAAAGCTAATCAAGACCCCTTATCCACTTCCAAAGCACCCCACGGGGAAGTTTAAGCCAGTTTTACCTCCACCAATTTCAAAAGAACACAACTCACTCCTGTCCCAACCAGGAAAATCTACTG
TTTCCCCAAGGGACAAGGTCCAGTCAGGAAACACAGAGAGCAGCAAAGCACCTTCTGAAGTGATTCAAGTGTCACCTGGCTATACACTCATTCGAAATCGAGAACAGATATCAGTCACCTTGGGAGAT
GAGATGTTCAACAGGAAAAAGCACTTGGAATCAGATGTCTTGAGCAAAGTCAAATTTTCCAGGACTGATATCATTTCTGACCTTCAGGAGCAAATTGCTGAGTTGATGGCAATAATAGAACAGATGAA
CAGAGACCAGCAGTCTGCCCTGAAACTGCTCTCCAAAGATCTGGATCTCCGCTGTTCCAACATGAAGCAGAAGTTTGAAACCGAGAGCAGGGAACTCAAAGAGACTCACAGAGAGGAGCTCGAGAGGT
TAGAGAACAACTACAAGGAGGCCCTGAAGGCAGAAAAGGCCTTGGCCGAAGAGAAACTAGATAAGATGAGCAAGGAATATAAGTATCTGAAGAGTATGTTCCATGTGTTTCAGGATAGCATTTACGAG
GAAATGGAAGACAAGTGGCTGAGACGAAAGGCCGAATGGGAGAAAGATGAGAAGATGGAGCGGGAAAAGATCCTGCTACAACAAAAATGTAGAATAATAAAAAAGTTTGAGTTACAGTCGGAAGAAAA
AAAGAAGAAAATGAATGAGTCCATCAGTGCTGTTTCTGATAACTTCGCTCGAGAGAAAGAGGAGCTCCTAAGACAACATGATGAAGACATCCTGCAAATACAGGAGCTGAGAAAATCCAAAGAGATCT
TGGAGGCTGAGTTGCGGGCACAAGCTACTGTTCTGGAGACCCTGAACACAAACCTTTTCCAATGCCAGAAAGAACTCGAGAGACAGAAAACTATTGCGGCAAATCTAGAGAAATTGTTCCAGACAAAG
CTTGCTGAAGCTGAAGAAAAGCATAAGTACAACATAAAGACCCCGACAGAAGAAAATAACTGCCTCAGGCAGATGTTAACCACAACCACATATGAGGAAACTTCAGAAGTTTCTGAGAAGTCCTCATC
TGCCAGTCCCAACATGTATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAGCATCGTAGGTAACTAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTG
GAGAGACGCACGGGAAGGCTGAGCTCTTGAGTTGTTCTGTACTTTTGTCATTTTTCACAATTTGCTTTCTTCCAATGGATAGAAATATTTGAATTCTTATCCTAATTATATCTTGGCTCTCCATTGAG
AACTGGTGTCCTCTGTACTGGAGTCGGACTTCTGTGGGCTGTGTGCTATGCTCTTTTTTACTTTTCACATGAGACTAATTTGAAGGGTCTTCTTTTTGGGTGATCCTTGCATTTTGGGGTGTGACTTT
TGTCCCCCTGAGGGTAAACAGCAATTCATTGATTTAATTCCAAAATCTTTATTCCCTCCCATATCAGACTTTTTAGCCCAGTGACTTGGGAAGAGTAACTGAATATTTACACTGTCTCTGACCATCAG
GAGAACTCAAATGCCCACAGAGCAGGCAACAAATCCATGGAACCGGAGTGGGCACAGAGTAACCAGTCACAGAGGCAGGATGCTAGAGGAGGTCGGTAAACTCAGAGCCACACCCTTTTCTGACCATG
GCACTTCTTAGACTCATTGGACTGCCTGCCACTTGGGTGCATGGGGTCATTATGATTAAAAAAAAATTCTGGTTTTTATGTGGAAGTGCTTTTAAGTGTTGGCAAGGAATGTCAAATGTTCACCACGT
GTGAACATGCCAATTGTAAAACAAAACAACAACAACAAAAAAACAAACAAAGCAAAAACAAACAAAAGGATCCCCTAGAAACAGTAAGGTAAATCTATTTTTCTTAAAACAAAACAAAACAATACAGC
TTTTGTCTCACTGACAGTTTACTTAGGAGGGAACAGGGAATATAAAAGTTTATAGGTACAGATTCAATAAAATATATACTAAAGAGTAATGCGTAGAACAACTCAGTTTCTTTTAAAAAGCTATATGA
AAACATAAAAATAACCCTATACATTAATATGGAATTTGAAAAACAAACAAAATTCAAGATAGAGATCCTGCTAGATCCTGATTCAAACAGACTGTAAGAATGCAAGAAGATCGGGAGATTTTTAACAC
TGACTGGTATTTAATGTTCAAAATTGCTTTGGCTATCTAAAACGTACCTCATCCTTAGAGACACTTGGGTCTCTAAACTATTCATATGTAAGAATATTCCACCTCCATGGACCCAAGTCAGAGCCTCC
AAGTGAGGGAGTAAGGCAGGCAGGTGAGGATACAGTCAGGGAGGACAGAGCACAGCACAGATGTTGATGTTGGAGGCTGTAAGCATGTGGCTTCACCATGCTGCCATTGCTTTTAGTTTTTGTATATT
TATGAAATTTTTCACAATAAAATACTTGTTTTAGAAAATAA

hide sequence

RefSeq Acc Id:

XM_006495615 ⟹ XP_006495678

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	58,698,870 - 58,735,167 (-)	NCBI
GRCm38	1	58,659,711 - 58,696,008 (-)	NCBI

Sequence:

show sequence

GCCATTGGGTTTCCATAGTGATAAAAGAAACAAACCATCCTGGGGCACAAGTCAGGCTCAGTCA
AAGGACTAGCTAGAGGGTGAATTCCTCCTCAAGGGACTTTCAGGAGCCCCTGGCCTAGCAAGACTGCCTTGTACCATGGACCCCAATCCTTTCATCTACTGTACCTGCTGTGACTGCTGCAAATTGGG
ACAACCAAAGCTAATCAAGACCCCTTATCCACTTCCAAAGCACCCCACGGGGAAGTTTAAGCCAGTTTTACCTCCACCAATTTCAAAAGAACACAACTCACTCCTGTCCCAACCAGGAAAATCTACTG
TTTCCCCAAGGGACAAGGTCCAGTCAGGAAACACAGAGAGCAGCAAAGCACCTTCTGAAGTGATTCAAGTGTCACCTGGCTATACACTCATTCGAAATCGAGAACAGATATCAGTCACCTTGGGAGAT
GAGATGTTCAACAGGAAAAAGCACTTGGAATCAGATGTCTTGAGCAAAGTCAAATTTTCCAGGACTGATATCATTTCTGACCTTCAGGAGCAAATTGCTGAGTTGATGGCAATAATAGAACAGATGAA
CAGAGACCAGCAGTCTGCCCTGAAACTGCTCTCCAAAGATCTGGATCTCCGCTGTTCCAACATGAAGCAGAAGTTTGAAACCGAGAGCAGGGAACTCAAAGAGACTCACAGAGAGGAGCTCGAGAGGT
TAGAGAACAACTACAAGGAGGCCCTGAAGGCAGAAAAGGCCTTGGCCGAAGAGAAACTAGATAAGATGAGCAAGGAATATAAGTATCTGAAGAGTATGTTCCATGTGTTTCAGGATAGCATTTACGAG
GAAATGGAAGACAAGTGGCTGAGACGAAAGGCCGAATGGGAGAAAGATGAGAAGATGGAGCGGGAAAAGATCCTGCTACAACAAAAATGTAGAATAATAAAAAAGTTTGAGTTACAGTCGGAAGAAAA
AAAGAAGAAAATGAATGAGTCCATCAGTGCTGTTTCTGATAACTTCGCTCGAGAGAAAGAGGAGCTCCTAAGACAACATGATGAAGACATCCTGCAAATACAGGAGCTGAGAAAATCCAAAGAGAATA
TCACAGAGTTGGAGTCAATAGAAAGAGGTATTGTAATAAAGAATATGCAGAATGGGGTTGGAGAGATGCCCTAGCAGCTCACAGCATTTGCTTGTCTTCCAGAGGAACAGAGCTTAGGACCTAGCATC
CAAATCAGGTGACTCACAGCTGCCTATTAACTCCAGTTCCAGAAGAGCTGATGCGTTCTTCCGGTTTCTACAAACACCTACACTCACATGTGTACCTGCTTGTGTGAACACACACACACACACTAAAA
ATTAAATATAAAAATTTTTTAAGGAG

hide sequence

RefSeq Acc Id:

XM_006495617 ⟹ XP_006495680

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	58,707,032 - 58,735,166 (-)	NCBI
GRCm38	1	58,667,873 - 58,696,007 (-)	NCBI

Sequence:

show sequence

CCATTGGGTTTCCATAGTGATAAAAGAAACAAACCATCCTGGGGCACAAGTCAGGCTCAGTCAA
AGGACTAGCTAGAGGGTGAATTCCTCCTCAAGGGACTTTCAGGAGCCCCTGGCCTAGCAAGACTGCCTTGTACCATGGACCCCAATCCTTTCATCTACTGTACCTGCTGTGACTGCTGCAAATTGGGA
CAACCAAAGCTAATCAAGACCCCTTATCCACTTCCAAAGCACCCCACGGGGAAGTTTAAGCCAGTTTTACCTCCACCAATTTCAAAAGAACACAACTCACTCCTGTCCCAACCAGGAAAATCTACTGT
TTCCCCAAGGGACAAGGTCCAGTCAGGAAACACAGAGAGCAGCAAAGCACCTTCTGAAGTGATTCAAGTGTCACCTGGCTATACACTCATTCGAAATCGAGAACAGATATCAGTCACCTTGGGAGATG
AGATGTTCAACAGGAAAAAGCACTTGGAATCAGATGTCTTGAGCAAAGTCAAATTTTCCAGGACTGATATCATTTCTGACCTTCAGGAGCAAATTGCTGAGTTGATGGCAATAATAGAACAGATGAAC
AGAGACCAGCAGTCTGCCCTGAAACTGCTCTCCAAAGATCTGGATCTCCGCTGTTCCAACATGAAGCAGAAGTTTGAAACCGAGAGCAGGGAACTCAAAGAGACTCACAGAGAGGAGCTCGAGAGGTT
AGAGAACAACTACAAGGAGGCCCTGAAGGCAGAAAAGGCCTTGGCCGAAGAGAAACTAGAAGTAGAAAGTAAAAGTGGACAATTCCCCAAACTTGATGAAGACCCAGAGCAGGCTGCCTTACAGGGAG
ATGCAGAGTCAGATGATTCTCAGACTCAGAGAGCCGATCTGTCTTCCAAAGAAGTCAAGATTCACAGGGTAAATGCTGTTACTAGAGGGCCTTTGACCTTCCAGCTTATCCCAGCTCTCCTCTGAGCT
TTGCTGGAATGGGCTTTTTTATGTGTAACCCATGGAAGGGTCCCTCAGCAAGGCCCAAGTTAGGGGAGAGCAACGCCCCATGTGACCCTGTGAGTAACTCAGCAGTGTTCCCCTGTCATAGCGTTCCC
CTGCAGTAGAGTTCC

hide sequence

RefSeq Acc Id:

XM_006495618 ⟹ XP_006495681

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	58,696,085 - 58,730,752 (-)	NCBI
GRCm38	1	58,656,926 - 58,691,595 (-)	NCBI

Sequence:

show sequence

TTCTTCACTGAGGCCCTGTGCCAACAAATTACCCTAGGTGCCCAGGAGACAAACACATACACAC
ACACACACACAAACACACACACACACACACACACACACACACAAGACCTCATGGCTGACTTGAACTAATTTGCTATCAAGGATGTCAGAAAACTGCCACAATCCATTGATTTGTCCCCTCAACCAAAT
CCATGGTGATTTCAGCTCAGAGAAGGTAAGGAAGCAGTGCCTGGCTGCAGAGAGGAGCCCACAGCCCTGGAGAGCAGGGAGATGGAGCATGGCACAGACTGGAGGTGGTCAGGTGGCTGACCTAAGAT
GTAACTGTGTGGGGCCAATGCACTTATGAGAAACAAAGTGTCAGTCAGCAATAAGATGTGAACTCTGTGCAGACAAACACGGGGTCATGGGAAGGCTCTGAATGTTGCAAAGGCATGGAGTTAATTTG
CCCTGAGAGCTCCAGACTGCACCCACATCCATTTGGACTGCTCCCTCAATGGGGCCCTAGGCCAAAGTGACCCCAGCTCCCCAGGGTGCTCCTCCAGAAGGGCAGAGCTGGCGACACCAGGGTGCGGC
TCCCTGGGCTCCACCTGTTTTCTGCTCTTCTGCTTTCTGAGCATGTTTCTCTCTTGCAGGGACAAGGTCCAGTCAGGAAACACAGAGAGCAGCAAAGCACCTTCTGACTGATATCATTTCTGACCTTC
AGGAGCAAATTGCTGAGTTGATGGCAATAATAGAACAGATGAACAGAGACCAGCAGTCTGCCCTGAAACTGCTCTCCAAAGATCTGGATCTCCGCTGTTCCAACATGAAGCAGAAGTTTGAAACCGAG
AGCAGATAAGATGAGCAAGGAATATAAGTATCTGAAGAGTATGTTCCATGTGTTTCAGGATAGCATTTACGAGGAAATGGAAGACAAGTGGCTGAGACGAAAGGCCGAATGGGAGAAAGATGAGAAGA
TGGAGCGGGAAAAGATCCTGCTACAACAAAAATGTAGAATAATAAAAAAGTTTGAGTTACAGTCGGAAGAAAAAAAGAAGAAAATGAATGAGTCCATCAGTGCTGTTTCTGATAACTTCGCTCGAGAG
AAAGAGGAGCTCCTAAGACAACATGATGAAGACATCCTGCAAATACAGGAGCTGAGAAAATCCAAAGAGATCTTGGAGGCTGAGTTGCGGGCACAAGCTACTGTTCTGGAGACCCTGAACACAAACCT
TTTCCAATGCCAGAAAGAACTCGAGAGACAGAAAACTATTGCGGCAAATCTAGAGAAATTGTTCCAGACAAAGCTTGCTGAAGCTGAAGAAAAGCATAAGTACAACATAAAGACCCCGACAGAAGAAA
ATAACTGCCTCAGGCAGATGTTAACCACAACCACATATGAGGAAACTTCAGAAGTTTCTGAGAAGTCCTCATCTGCCAGTCCCAACATGTATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAG
CAAGCATCGTAGGTAACTAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGGGAAGGCTGAGCTCTTGAGTTGTTCTGTACTTTTGTCATTTTT
CACAATTTGCTTTCTTCCAATGGATAGAAATATTTGAATTCTTATCCTAATTATATCTTGGCTCTCCATTGAGAACTGGTGTCCTCTGTACTGGAGTCGGACTTCTGTGGGCTGTGTGCTATGCTCTT
TTTTACTTTTCACATGAGACTAATTTGAAGGGTCTTCTTTTTGGGTGATCCTTGCATTTTGGGGTGTGACTTTTGTCCCCCTGAGGGTAAACAGCAATTCATTGATTTAATTCCAAAATCTTTATTCC
CTCCCATATCAGACTTTTTAGCCCAGTGACTTGGGAAGAGTAACTGAATATTTACACTGTCTCTGACCATCAGGAGAACTCAAATGCCCACAGAGCAGGCAACAAATCCATGGAACCGGAGTGGGCAC
AGAGTAACCAGTCACAGAGGCAGGATGCTAGAGGAGGTCGGTAAACTCAGAGCCACACCCTTTTCTGACCATGGCACTTCTTAGACTCATTGGACTGCCTGCCACTTGGGTGCATGGGGTCATTATGA
TTAAAAAAAAATTCTGGTTTTTATGTGGAAGTGCTTTTAAGTGTTGGCAAGGAATGTCAAATGTTCACCACGTGTGAACATGCCAATTGTAAAACAAAACAACAACAACAAAAAAACAAACAAAGCAA
AAACAAACAAAAGGATCCCCTAGAAACAGTAAGGTAAATCTATTTTTCTTAAAACAAAACAAAACAATACAGCTTTTGTCTCACTGACAGTTTACTTAGGAGGGAACAGGGAATATAAAAGTTTATAG
GTACAGATTCAATAAAATATATACTAAAGAGTAATGCGTAGAACAACTCAGTTTCTTTTAAAAAGCTATATGAAAACATAAAAATAACCCTATACATTAATATGGAATTTGAAAAACAAACAAAATTC
AAGATAGAGATCCTGCTAGATCCTGATTCAAACAGACTGTAAGAATGCAAGAAGATCGGGAGATTTTTAACACTGACTGGTATTTAATGTTCAAAATTGCTTTGGCTATCTAAAACGTACCTCATCCT
TAGAGACACTTGGGTCTCTAAACTATTCATATGTAAGAATATTCCACCTCCATGGACCCAAGTCAGAGCCTCCAAGTGAGGGAGTAAGGCAGGCAGGTGAGGATACAGTCAGGGAGGACAGAGCACAG
CACAGATGTTGATGTTGGAGGCTGTAAGCATGTGGCTTCACCATGCTGCCATTGCTTTTAGTTTTTGTATATTTATGAAATTTTTCACAATAAAATACTTGTTTTAGAAAATAA

hide sequence

RefSeq Acc Id:

XM_017321225 ⟹ XP_017176714

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	58,696,085 - 58,730,751 (-)	NCBI
GRCm38	1	58,656,926 - 58,691,594 (-)	NCBI

Sequence:

show sequence

TCTTCACTGAGGCCCTGTGCCAACAAATTACCCTAGGTGCCCAGGAGACAAACACATACACACACACACACACAAACACACACACACACACACACACACACACACAAGACCTCATGGCTGACTTGAAC
TAATTTGCTATCAAGGATGTCAGAAAACTGCCACAATCCATTGATTTGTCCCCTCAACCAAATCCATGGTGATTTCAGCTCAGAGAAGGTAAGGAAGCAGTGCCTGGCTGCAGAGAGGAGCCCACAGC
CCTGGAGAGCAGGGAGATGGAGCATGGCACAGACTGGAGGTGGTCAGGTGGCTGACCTAAGATGTAACTGTGTGGGGCCAATGCACTTATGAGAAACAAAGTGTCAGTCAGCAATAAGATGTGAACTC
TGTGCAGACAAACACGGGGTCATGGGAAGGCTCTGAATGTTGCAAAGGCATGGAGTTAATTTGCCCTGAGAGCTCCAGACTGCACCCACATCCATTTGGACTGCTCCCTCAATGGGGCCCTAGGCCAA
AGTGACCCCAGCTCCCCAGGGTGCTCCTCCAGAAGGGCAGAGCTGGCGACACCAGGGTGCGGCTCCCTGGGCTCCACCTGTTTTCTGCTCTTCTGCTTTCTGAGCATGTTTCTCTCTTGCAGGGACAA
GGTCCAGTCAGGAAACACAGAGAGCAGCAAAGCACCTTCTGACTGATATCATTTCTGACCTTCAGGAGCAAATTGCTGAGTTGATGGCAATAATAGAACAGATGAACAGAGACCAGCAGTCTGCCCTG
AAACTGCTCTCCAAAGATCTGGATCTCCGCTGTTCCAACATGAAGCAGAAGTTTGAAACCGAGAGCAGGGAACTCAAAGAGACTCACAGAGAGGAGCTCGAGAGGTTAGAGAACAACTACAAGGAGGC
CCTGAAGGCAGAAAAGGCCTTGGCCGAAGAGAAACTAGATAAGATGAGCAAGGAATATAAGTATCTGAAGAGTATGTTCCATGTGTTTCAGGATAGCATTTACGAGGAAATGGAAGACAAGTGGCTGA
GACGAAAGGCCGAATGGGAGAAAGATGAGAAGATGGAGCGGGAAAAGATCCTGCTACAACAAAAATGTAGAATAATAAAAAAGTTTGAGTTACAGTCGGAAGAAAAAAAGAAGAAAATGAATGAGTCC
ATCAGTGCTGTTTCTGATAACTTCGCTCGAGAGAAAGAGGAGCTCCTAAGACAACATGATGAAGACATCCTGCAAATACAGGAGCTGAGAAAATCCAAAGAGATCTTGGAGGCTGAGTTGCGGGCACA
AGCTACTGTTCTGGAGACCCTGAACACAAACCTTTTCCAATGCCAGAAAGAACTCGAGAGACAGAAAACTATTGCGGCAAATCTAGAGAAATTGTTCCAGACAAAGCTTGCTGAAGCTGAAGAAAAGC
ATAAGTACAACATAAAGACCCCGACAGAAGAAAATAACTGCCTCAGGCAGATGTTAACCACAACCACATATGAGGAAACTTCAGAAGTTTCTGAGAAGTCCTCATCTGCCAGTCCCAACATGTATGAG
TCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAGCATCGTAGGTAACTAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGGGAAGGCTGA
GCTCTTGAGTTGTTCTGTACTTTTGTCATTTTTCACAATTTGCTTTCTTCCAATGGATAGAAATATTTGAATTCTTATCCTAATTATATCTTGGCTCTCCATTGAGAACTGGTGTCCTCTGTACTGGA
GTCGGACTTCTGTGGGCTGTGTGCTATGCTCTTTTTTACTTTTCACATGAGACTAATTTGAAGGGTCTTCTTTTTGGGTGATCCTTGCATTTTGGGGTGTGACTTTTGTCCCCCTGAGGGTAAACAGC
AATTCATTGATTTAATTCCAAAATCTTTATTCCCTCCCATATCAGACTTTTTAGCCCAGTGACTTGGGAAGAGTAACTGAATATTTACACTGTCTCTGACCATCAGGAGAACTCAAATGCCCACAGAG
CAGGCAACAAATCCATGGAACCGGAGTGGGCACAGAGTAACCAGTCACAGAGGCAGGATGCTAGAGGAGGTCGGTAAACTCAGAGCCACACCCTTTTCTGACCATGGCACTTCTTAGACTCATTGGAC
TGCCTGCCACTTGGGTGCATGGGGTCATTATGATTAAAAAAAAATTCTGGTTTTTATGTGGAAGTGCTTTTAAGTGTTGGCAAGGAATGTCAAATGTTCACCACGTGTGAACATGCCAATTGTAAAAC
AAAACAACAACAACAAAAAAACAAACAAAGCAAAAACAAACAAAAGGATCCCCTAGAAACAGTAAGGTAAATCTATTTTTCTTAAAACAAAACAAAACAATACAGCTTTTGTCTCACTGACAGTTTAC
TTAGGAGGGAACAGGGAATATAAAAGTTTATAGGTACAGATTCAATAAAATATATACTAAAGAGTAATGCGTAGAACAACTCAGTTTCTTTTAAAAAGCTATATGAAAACATAAAAATAACCCTATAC
ATTAATATGGAATTTGAAAAACAAACAAAATTCAAGATAGAGATCCTGCTAGATCCTGATTCAAACAGACTGTAAGAATGCAAGAAGATCGGGAGATTTTTAACACTGACTGGTATTTAATGTTCAAA
ATTGCTTTGGCTATCTAAAACGTACCTCATCCTTAGAGACACTTGGGTCTCTAAACTATTCATATGTAAGAATATTCCACCTCCATGGACCCAAGTCAGAGCCTCCAAGTGAGGGAGTAAGGCAGGCA
GGTGAGGATACAGTCAGGGAGGACAGAGCACAGCACAGATGTTGATGTTGGAGGCTGTAAGCATGTGGCTTCACCATGCTGCCATTGCTTTTAGTTTTTGTATATTTATGAAATTTTTCACAATAAAA
TACTTGTTTTAGAAAATAA

hide sequence

RefSeq Acc Id:

XM_030255466 ⟹ XP_030111326

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	58,696,085 - 58,735,040 (-)	NCBI
GRCm38	1	58,656,926 - 58,695,882 (-)	NCBI

Sequence:

show sequence

AACTGTCTTCTAAGGGAAGCTCCTGGGGTGGATGGCCGCGGAACCCTTCTAAACACCACTGGCT
GGGTTTGCAAGTCTTCAAGGCAGTCTGGAGATTTCTGCCTTGGCATCTCAACCACTTGGGAATAAACACAGCAACCATGAGTTCTGAAACACCTTGATTGGGAGCCCCTGGCCTAGCAAGACTGCCTT
GTACCATGGACCCCAATCCTTTCATCTACTGTACCTGCTGTGACTGCTGCAAATTGGGACAACCAAAGCTAATCAAGACCCCTTATCCACTTCCAAAGCACCCCACGGGGAAGTTTAAGCCAGTTTTA
CCTCCACCAATTTCAAAAGAACACAACTCACTCCTGTCCCAACCAGGAAAATCTACTGTTTCCCCAAGGGACAAGGTCCAGTCAGGAAACACAGAGAGCAGCAAAGCACCTTCTGAAGTGATTCAAGT
GTCACCTGGCTATACACTCATTCGAAATCGAGAACAGATATCAGTCACCTTGGGAGATGAGATGTTCAACAGGAAAAAGCACTTGGAATCAGATGTCTTGAGCAAAGTCAAATTTTCCAGGACTGATA
TCATTTCTGACCTTCAGGAGCAAATTGCTGAGTTGATGGCAATAATAGAACAGATGAACAGAGACCAGCAGTCTGCCCTGAAACTGCTCTCCAAAGATCTGGATCTCCGCTGTTCCAACATGAAGCAG
AAGTTTGAAACCGAGAGCAGGGAACTCAAAGAGACTCACAGAGAGGAGCTCGAGAGGTTAGAGAACAACTACAAGGAGGCCCTGAAGGCAGAAAAGGCCTTGGCCGAAGAGAAACTAGATAAGATGAG
CAAGGAATATAAGTATCTGAAGAGTATGTTCCATGTGTTTCAGGATAGCATTTACGAGGAAATGGAAGACAAGTGGCTGAGACGAAAGGCCGAATGGGAGAAAGATGAGAAGATGGAGCGGGAAAAGA
TCCTGCTACAACAAAAATGTAGAATAATAAAAAAGTTTGAGTTACAGTCGGAAGAAAAAAAGAAGAAAATGAATGAGTCCATCAGTGCTGTTTCTGATAACTTCGCTCGAGAGAAAGAGGAGCTCCTA
AGACAACATGATGAAGACATCCTGCAAATACAGGAGCTGAGAAAATCCAAAGAGATCTTGGAGGCTGAGTTGCGGGCACAAGCTACTGTTCTGGAGACCCTGAACACAAACCTTTTCCAATGCCAGAA
AGAACTCGAGAGACAGAAAACTATTGCGGCAAATCTAGAGAAATTGTTCCAGACAAAGCTTGCTGAAGCTGAAGAAAAGCATAAGTACAACATAAAGACCCCGACAGAAGAAAATAACTGCCTCAGGC
AGATGTTAACCACAACCACATATGAGGAAACTTCAGAAGTTTCTGAGAAGTCCTCATCTGCCAGTCCCAACATGTATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAGCATCGTAGGTA
ACTAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGGGAAGGCTGAGCTCTTGAGTTGTTCTGTACTTTTGTCATTTTTCACAATTTGCTTTCT
TCCAATGGATAGAAATATTTGAATTCTTATCCTAATTATATCTTGGCTCTCCATTGAGAACTGGTGTCCTCTGTACTGGAGTCGGACTTCTGTGGGCTGTGTGCTATGCTCTTTTTTACTTTTCACAT
GAGACTAATTTGAAGGGTCTTCTTTTTGGGTGATCCTTGCATTTTGGGGTGTGACTTTTGTCCCCCTGAGGGTAAACAGCAATTCATTGATTTAATTCCAAAATCTTTATTCCCTCCCATATCAGACT
TTTTAGCCCAGTGACTTGGGAAGAGTAACTGAATATTTACACTGTCTCTGACCATCAGGAGAACTCAAATGCCCACAGAGCAGGCAACAAATCCATGGAACCGGAGTGGGCACAGAGTAACCAGTCAC
AGAGGCAGGATGCTAGAGGAGGTCGGTAAACTCAGAGCCACACCCTTTTCTGACCATGGCACTTCTTAGACTCATTGGACTGCCTGCCACTTGGGTGCATGGGGTCATTATGATTAAAAAAAAATTCT
GGTTTTTATGTGGAAGTGCTTTTAAGTGTTGGCAAGGAATGTCAAATGTTCACCACGTGTGAACATGCCAATTGTAAAACAAAACAACAACAACAAAAAAACAAACAAAGCAAAAACAAACAAAAGGA
TCCCCTAGAAACAGTAAGGTAAATCTATTTTTCTTAAAACAAAACAAAACAATACAGCTTTTGTCTCACTGACAGTTTACTTAGGAGGGAACAGGGAATATAAAAGTTTATAGGTACAGATTCAATAA
AATATATACTAAAGAGTAATGCGTAGAACAACTCAGTTTCTTTTAAAAAGCTATATGAAAACATAAAAATAACCCTATACATTAATATGGAATTTGAAAAACAAACAAAATTCAAGATAGAGATCCTG
CTAGATCCTGATTCAAACAGACTGTAAGAATGCAAGAAGATCGGGAGATTTTTAACACTGACTGGTATTTAATGTTCAAAATTGCTTTGGCTATCTAAAACGTACCTCATCCTTAGAGACACTTGGGT
CTCTAAACTATTCATATGTAAGAATATTCCACCTCCATGGACCCAAGTCAGAGCCTCCAAGTGAGGGAGTAAGGCAGGCAGGTGAGGATACAGTCAGGGAGGACAGAGCACAGCACAGATGTTGATGT
TGGAGGCTGTAAGCATGTGGCTTCACCATGCTGCCATTGCTTTTAGTTTTTGTATATTTATGAAATTTTTCACAATAAAATACTTGTTTTAGAAAATAA

hide sequence

RefSeq Acc Id:

XR_865219

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	58,698,453 - 58,735,167 (-)	NCBI
GRCm38	1	58,659,294 - 58,696,008 (-)	NCBI

Sequence:

show sequence

GCCATTGGGTTTCCATAGTGATAAAAGAAACAAACCATCCTGGGGCACAAGTCAGGCTCAGTCAAAGGACTAGCTAGAGGGTGAATTCCTCCTCAAGGGACTTTCAGGAGCCCCTGGCCTAGCAAGAC
TGCCTTGTACCATGGACCCCAATCCTTTCATCTACTGTACCTGCTGTGACTGCTGCAAATTGGGACAACCAAAGCTAATCAAGACCCCTTATCCACTTCCAAAGCACCCCACGGGGAAGTTTAAGCCA
GTTTTACCTCCACCAATTTCAAAAGAACACAACTCACTCCTGTCCCAACCAGGAAAATCTACTGTTTCCCCAAGGGACAAGGTCCAGTCAGGAAACACAGAGAGCAGCAAAGCACCTTCTGAAGTGAT
TCAAGTGTCACCTGGCTATACACTCATTCGAAATCGAGAACAGATATCAGTCACCTTGGGAGATGAGATGTTCAACAGGAAAAAGCACTTGGAATCAGATGTCTTGAGCAAAGTCAAATTTTCCAGGA
CTGATATCATTTCTGACCTTCAGGAGCAAATTGCTGAGTTGATGGCAATAATAGAACAGATGAACAGAGACCAGCAGTCTGCCCTGAAACTGCTCTCCAAAGATCTGGATCTCCGCTGTTCCAACATG
AAGCAGAAGTTTGAAACCGAGAGCAGGGAACTCAAAGAGACTCACAGAGAGGAGCTCGAGAGGTTAGAGAACAACTACAAGGAGGCCCTGAAGGCAGAAAAGGCCTTGGCCGAAGAGAAACTAGATAA
GATGAGCAAGGAATATAAGTATCTGAAGAGTATGTTCCATGTGTTTCAGGATAGCATTTACGAGGAAATGGAAGACAAGTGGCTGAGACGAAAGGCCGAATGGGAGAAAGATGAGAAGATGGAGCGGG
AAAAGATCCTGCTACAACAAAAATGTAGAATAATAAAAAAGTTTGAGTTACAGTCGGAAGAAAAAAAGAAGAAAATGAATGAGTCCATCAGTGCTGTTTCTGATAACTTCGCTCGAGAGAAAGAGGAG
CTCCTAAGACAACATGATGAAGACATCCTGCAAATACAGGAGCTGAGAAAATCCAAAGAGAATATCACAGAGTTGGAGTCAATAGAAAGAGGTATTGTAATAAAGAATATGCAGAATGGGGTTGGAGA
GATGCCCTAGCAGCTCACAGCATTTGCTTGTCTTCCAGAGGAACAGAGCTTAGGACCTAGCATCCAAATCAGATCTTGGAGGCTGAGTTGC

hide sequence


Protein RefSeqs	NP_001333985	(Get FASTA)	NCBI Sequence Viewer
	NP_780579	(Get FASTA)	NCBI Sequence Viewer
	XP_006495676	(Get FASTA)	NCBI Sequence Viewer
	XP_006495678	(Get FASTA)	NCBI Sequence Viewer
	XP_006495680	(Get FASTA)	NCBI Sequence Viewer
	XP_006495681	(Get FASTA)	NCBI Sequence Viewer
	XP_017176714	(Get FASTA)	NCBI Sequence Viewer
	XP_030111326	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	BAC36671	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000062497
	ENSMUSP00000062497.8
	ENSMUSP00000139420
	ENSMUSP00000140780
GenBank Protein	Q8BVM7	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_780579 ⟸ NM_175370
- Peptide Label:	isoform b
- UniProtKB:	Q8BVM7 (UniProtKB/Swiss-Prot), A0A087WRU9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPNPFIYCTCCDCCKLGQPKLIKTPYPLPKHPTGKFKPVLPPPISKEHNSLLSQPGKSTVSPRDKVQSGNTESSKAPSEVIQVSPGYTLIRNREQISVTLGDEMFNRKKHLESDVLSKVKFSRTDII SDLQEQIAELMAIIEQMNRDQQSALKLLSKDLDLRCSNMKQKFETESRELKETHREELERLENNYKEALKAEKALAEEKLDKMSKEYKYLKSMFHVFQDSIYEEMEDKWLRRKAEWEKDEKMEREKIL LQQKCRIIKKFELQSEEKKKKMNESISAVSDNFAREKEELLRQHDEDILQIQELRKSKEILEAELRAQATVLETLNTNLFQCQKELERQKTIAANLEKLFQTKLAEAEEKHKYNIKTPTEENNCLRC hide sequence

RefSeq Acc Id:	XP_006495676 ⟸ XM_006495613
- Peptide Label:	isoform X1
- UniProtKB:	A0A087WNN1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPNPFIYCTCCDCCKLGQPKLIKTPYPLPKHPTGKFKPVLPPPISKEHNSLLSQPGKSTVSPRDKVQSGNTESSKAPSEVIQVSPGYTLIRNREQISVTLGDEMFNRKKHLESDVLSKVKFSRTDII SDLQEQIAELMAIIEQMNRDQQSALKLLSKDLDLRCSNMKQKFETESRELKETHREELERLENNYKEALKAEKALAEEKLDKMSKEYKYLKSMFHVFQDSIYEEMEDKWLRRKAEWEKDEKMEREKIL LQQKCRIIKKFELQSEEKKKKMNESISAVSDNFAREKEELLRQHDEDILQIQELRKSKEILEAELRAQATVLETLNTNLFQCQKELERQKTIAANLEKLFQTKLAEAEEKHKYNIKTPTEENNCLRQM LTTTTYEETSEVSEKSSSASPNMYESDVPEHNSNKKQAS hide sequence

RefSeq Acc Id:

XP_006495681 ⟸ XM_006495618

- Peptide Label:

isoform X5

- Sequence:

show sequence

MSKEYKYLKSMFHVFQDSIYEEMEDKWLRRKAEWEKDEKMEREKILLQQKCRIIKKFELQSEEK
KKKMNESISAVSDNFAREKEELLRQHDEDILQIQELRKSKEILEAELRAQATVLETLNTNLFQCQKELERQKTIAANLEKLFQTKLAEAEEKHKYNIKTPTEENNCLRQMLTTTTYEETSEVSEKSSS
ASPNMYESDVPEHNSNKKQAS

hide sequence

RefSeq Acc Id:	XP_006495678 ⟸ XM_006495615
- Peptide Label:	isoform X2
- UniProtKB:	A0A087WRU9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPNPFIYCTCCDCCKLGQPKLIKTPYPLPKHPTGKFKPVLPPPISKEHNSLLSQPGKSTVSPR DKVQSGNTESSKAPSEVIQVSPGYTLIRNREQISVTLGDEMFNRKKHLESDVLSKVKFSRTDIISDLQEQIAELMAIIEQMNRDQQSALKLLSKDLDLRCSNMKQKFETESRELKETHREELERLENN YKEALKAEKALAEEKLDKMSKEYKYLKSMFHVFQDSIYEEMEDKWLRRKAEWEKDEKMEREKILLQQKCRIIKKFELQSEEKKKKMNESISAVSDNFAREKEELLRQHDEDILQIQELRKSKENITEL ESIERGIVIKNMQNGVGEMP hide sequence

RefSeq Acc Id:

XP_006495680 ⟸ XM_006495617

- Peptide Label:

isoform X4

- Sequence:

show sequence

MDPNPFIYCTCCDCCKLGQPKLIKTPYPLPKHPTGKFKPVLPPPISKEHNSLLSQPGKSTVSPR
DKVQSGNTESSKAPSEVIQVSPGYTLIRNREQISVTLGDEMFNRKKHLESDVLSKVKFSRTDIISDLQEQIAELMAIIEQMNRDQQSALKLLSKDLDLRCSNMKQKFETESRELKETHREELERLENN
YKEALKAEKALAEEKLEVESKSGQFPKLDEDPEQAALQGDAESDDSQTQRADLSSKEVKIHRVNAVTRGPLTFQLIPALL

hide sequence

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8BVM7-F1-model_v2	AlphaFold	Q8BVM7	1-383	view protein structure

RGD ID:

6873808

Promoter ID:

EPDNEW_M355

Type:

initiation region

Name:

Als2cr12_1

Description:

Mus musculus amyotrophic lateral sclerosis 2 chromosome region12 , transcript variant 4, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	1	58,695,960 - 58,696,020	EPDNEW

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000047528	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000055313	ENTREZGENE
	ENSMUST00000055313.14	UniProtKB/Swiss-Prot
	ENSMUST00000188772	ENTREZGENE
	ENSMUST00000191565	ENTREZGENE
InterPro	ALS2CR12	UniProtKB/Swiss-Prot
KEGG Report	mmu:108812	UniProtKB/Swiss-Prot
MGD	MGI:1918359	ENTREZGENE
NCBI Gene	Flacc1	ENTREZGENE
PANTHER	FLAGELLUM-ASSOCIATED COILED-COIL DOMAIN-CONTAINING PROTEIN 1	UniProtKB/Swiss-Prot
	PTHR21707	UniProtKB/Swiss-Prot
PhenoGen	Flacc1	PhenoGen
UniProt	A0A087WNN1	ENTREZGENE, UniProtKB/TrEMBL
	A0A087WRG1_MOUSE	UniProtKB/TrEMBL
	A0A087WRU9	ENTREZGENE, UniProtKB/TrEMBL
	FACC1_MOUSE	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2024-08-26	Flacc1	flagellum associated containing coiled-coil domains 1	4933425F06Rik	RIKEN cDNA 4933425F06 gene	Symbol and/or name updated	27372883	PROVISIONAL
2024-08-21	4933425F06Rik	RIKEN cDNA 4933425F06 gene	Flacc1	flagellum associated containing coiled-coil domains 1	Symbol and/or name change	5135510	APPROVED
2019-04-23	Flacc1	flagellum associated containing coiled-coil domains 1	Als2cr12	amyotrophic lateral sclerosis 2 chromosome region 12	Symbol and/or name change	5135510	APPROVED
2017-10-31	Als2cr12	amyotrophic lateral sclerosis 2 chromosome region 12		amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Mammalian Phenotype

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Mammalian Phenotype