Cdk15 (cyclin dependent kinase 15) - Rat Genome Database

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Gene: Cdk15 (cyclin dependent kinase 15) Mus musculus
Analyze
Symbol: Cdk15
Name: cyclin dependent kinase 15
RGD ID: 1614085
MGI Page MGI
Description: Predicted to enable cyclin binding activity and cyclin-dependent protein serine/threonine kinase activity. Predicted to act upstream of or within phosphorylation. Predicted to be active in cytosol and nucleus. Orthologous to human CDK15 (cyclin dependent kinase 15).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Als; Als2cr7; amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 7; amyotrophic lateral sclerosis 2 chromosomal region candidate gene 7 protein homolog; cell division protein kinase 15; cyclin-dependent kinase 15; PFTAIRE protein kinase 2; Pftk; Pftk2; serine/threonine-protein kinase ALS2CR7; serine/threonine-protein kinase PFTAIRE-2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39159,296,029 - 59,391,656 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl159,296,065 - 59,392,152 (+)EnsemblGRCm39 Ensembl
GRCm38159,256,861 - 59,352,497 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl159,256,906 - 59,352,993 (+)EnsemblGRCm38mm10GRCm38
MGSCv37159,313,751 - 59,409,213 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36159,201,452 - 59,297,158 (+)NCBIMGSCv36mm8
Celera159,774,052 - 59,869,619 (+)NCBICelera
Cytogenetic Map1C1.3- C2NCBI
cM Map129.47NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA)
cytosol  (IBA)
nucleus  (IBA)

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
2. Frizzled 2 and frizzled 7 function redundantly in convergent extension and closure of the ventricular septum and palate: evidence for a network of interacting genes. Yu H, etal., Development. 2012 Dec 1;139(23):4383-94. doi: 10.1242/dev.083352. Epub 2012 Oct 24.
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15782199   PMID:16141072   PMID:16141073   PMID:21267068   PMID:21677750  
PMID:21873635   PMID:24194600   PMID:27626380  


Genomics

Comparative Map Data
Cdk15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39159,296,029 - 59,391,656 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl159,296,065 - 59,392,152 (+)EnsemblGRCm39 Ensembl
GRCm38159,256,861 - 59,352,497 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl159,256,906 - 59,352,993 (+)EnsemblGRCm38mm10GRCm38
MGSCv37159,313,751 - 59,409,213 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36159,201,452 - 59,297,158 (+)NCBIMGSCv36mm8
Celera159,774,052 - 59,869,619 (+)NCBICelera
Cytogenetic Map1C1.3- C2NCBI
cM Map129.47NCBI
CDK15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382201,806,429 - 201,895,550 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2201,790,461 - 201,895,550 (+)EnsemblGRCh38hg38GRCh38
GRCh372202,671,152 - 202,760,273 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362202,379,443 - 202,466,511 (+)NCBINCBI36Build 36hg18NCBI36
Build 342202,496,703 - 202,583,769NCBI
Celera2196,423,311 - 196,510,043 (+)NCBICelera
Cytogenetic Map2q33.1NCBI
HuRef2194,519,358 - 194,609,045 (+)NCBIHuRef
CHM1_12202,677,626 - 202,766,857 (+)NCBICHM1_1
T2T-CHM13v2.02202,287,333 - 202,376,437 (+)NCBIT2T-CHM13v2.0
Cdk15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8968,205,759 - 68,299,218 (+)NCBIGRCr8
mRatBN7.2960,710,787 - 60,803,638 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl960,711,715 - 60,802,777 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0966,059,765 - 66,153,729 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl966,058,047 - 66,148,087 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0965,865,897 - 65,958,276 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4957,840,625 - 57,930,096 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1958,185,126 - 58,214,016 (+)NCBI
Celera958,148,588 - 58,242,444 (+)NCBICelera
Cytogenetic Map9q31NCBI
Cdk15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545712,880,959 - 12,966,410 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545712,878,736 - 12,966,434 (-)NCBIChiLan1.0ChiLan1.0
CDK15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213104,429,756 - 104,519,360 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B104,444,798 - 104,534,360 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B89,060,334 - 89,149,106 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B207,198,906 - 207,304,029 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B207,215,058 - 207,304,029 (+)Ensemblpanpan1.1panPan2
CDK15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13710,848,789 - 10,929,818 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3710,849,003 - 10,926,856 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3711,732,588 - 11,814,581 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03710,784,792 - 10,867,012 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3710,785,070 - 10,866,645 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13710,735,784 - 10,818,006 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03710,714,305 - 10,796,498 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03710,706,802 - 10,789,638 (+)NCBIUU_Cfam_GSD_1.0
Cdk15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303159,067,332 - 159,160,261 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367261,037,636 - 1,130,571 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367261,037,614 - 1,129,961 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CDK15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15105,401,165 - 105,506,114 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115105,401,170 - 105,506,112 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215116,938,476 - 116,997,821 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CDK15
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11087,499,225 - 87,592,748 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1087,499,808 - 87,589,730 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040111,820,757 - 111,914,138 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cdk15
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476514,555,207 - 14,641,545 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476514,550,267 - 14,641,749 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cdk15
2868 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:470
Count of miRNA genes:341
Interacting mature miRNAs:368
Transcripts:ENSMUST00000114248, ENSMUST00000160662, ENSMUST00000162487, ENSMUST00000162906
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1357475w3q13_mweight 3 weeks QTL 13 (mouse)Not determined12310959173976915Mouse
11100001Col4a1m1_mcollagen, type IV, alpha 1 modifier 1 (mouse)12555019162946882Mouse
12880409V125Dq1_mvitamin D active form serum level QTL 1 (mouse)12603916060039160Mouse
1357824Estoq4_membryo survival total QTL 4 (mouse)Not determined13476013873976915Mouse
39128207Lwq16_mliver weight QTL 16 (mouse)13476013873976915Mouse
1357759W3q12_mweight 3 weeks QTL 12 (mouse)Not determined13476013873976915Mouse
1357651Lgq5_mlate growth QTL 5 (mouse)Not determined13476013873976915Mouse
1357506W10q6_mweight 10 weeks QTL 6 (mouse)Not determined13476013873976915Mouse
1357524W6q14_mweight 6 weeks QTL 14 (mouse)Not determined13476013873976915Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134760138150193871Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134760138150193871Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134760138150193871Mouse
1301954Lrnx11_mlearning-contextual 11 (mouse)Not determined13913280874516365Mouse
1357721Sle17_msystematic lupus erythematosus susceptibility 17 (mouse)Not determined139132808126445310Mouse
12910780Pwgrq11_mpost-weaning growth rate QTL 11 (mouse)14086800867270256Mouse
12910786Pwgrq10_mpost-weaning growth rate QTL 10 (mouse)14086800867270256Mouse
12910788Pwgrq9_mpost-weaning growth rate QTL 9 (mouse)14086800867270256Mouse
1301166Thypr2_mthymocyte proliferative response 2 (mouse)Not determined14127312475273271Mouse
18182931Metl1_mmetabolite locus 1, pyridoxate (mouse)14127539975275399Mouse
4141032Wbcc1_mwhite blood cell count 1 (mouse)Not determined4225966776259667Mouse
1301714Vertcling_mvertical clinging (mouse)Not determined14293803176938167Mouse
12879917Shm3_msperm head morphology 3 (mouse)14418690462946882Mouse
1558855Eae30_mexperimental allergic encephalomyelitis susceptibility 30 (mouse)Not determined14541777372975057Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
1301670Ssta1_msusceptibility to Salmonella typhimurium antigens 1 (mouse)Not determined14594675579946882Mouse
1301616Yaa2_mY-linked autoimmune acceleration 2 (mouse)Not determined14685469080854839Mouse
1301225Sle7_msystematic lupus erythematosus susceptibility 7 (mouse)Not determined14685469080854839Mouse
1558905Gct7_mgranulosa cell tumorigenesis 7 (mouse)Not determined14734989481350013Mouse
1558822Vas1_mautoimmune vasitis resistance 1 (mouse)Not determined14888900682889210Mouse
1301211Bbaa11_mB.burgdorferi-associated arthritis 11 (mouse)Not determined14888900682889210Mouse
1301430Cdcs2_mcytokine deficiency colitis susceptibility 2 (mouse)Not determined14889234582892485Mouse
10043965Obq24_mobesity QTL 24 (mouse)Not determined15089021684890216Mouse
4141305Tgq9_mtriglyceride QTL 9 (mouse)Not determined5142160585421605Mouse
4142307Shali1_msurvival time to hyperoxic acute lung injury 1 (mouse)Not determined5196402570406589Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
1357741Nidd5k_mNidd5 on KK-A<y> (mouse)Not determined15597494889975057Mouse
4142467Wbcq1_mwhite blood cell quantitative locus 1 (mouse)Not determined15626621490266360Mouse
1357505Vtbt1_mvertebral trabecular bone trait 1 (mouse)Not determined15626621490266360Mouse
1558717Ses1a_msalmonella enteritidis susceptibility 1a (mouse)Not determined15672692290727077Mouse
1301933Insq6_minsulin QTL 6 (mouse)Not determined15672692290727077Mouse
4141724Idd5.1_minsulin dependent diabetes susceptibility 5.1 (mouse)Not determined5772827662946882Mouse
14746998Mancz1_mmandible centroid size 1 (mouse)15794135191941351Mouse
14747009Manh49_mmandible shape 49 (mouse)15794135191941351Mouse
1300746Skl1_mskeletal size (tail length) 1 (mouse)Not determined15799197791992080Mouse
1357679Egrm1_mearly growth rate, maternal effect 1 (mouse)Not determined15799197791992080Mouse
1301162Skull1_mskull morphology 1 (mouse)Not determined15799197791992080Mouse
1301667Lxw5_mlupus BXSB x NZW 5 (mouse)Not determined15854919192549443Mouse
1301444Alcw5_malcohol withdrawal 5 (mouse)Not determined15854919192549443Mouse

Markers in Region
48.MMHAP34FRH12.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38159,296,282 - 59,296,451UniSTSGRCm38
MGSCv37159,353,126 - 59,353,295UniSTSGRCm37
Celera159,813,425 - 59,813,594UniSTS
Cytogenetic Map1C1.3UniSTS
Whitehead_YAC1 UniSTS
D1Mit279  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38159,277,790 - 59,277,962UniSTSGRCm38
MGSCv37159,334,634 - 59,334,806UniSTSGRCm37
Celera159,794,931 - 59,795,103UniSTS
Cytogenetic Map1C1.3UniSTS
cM Map133.3UniSTS
Whitehead Genetic125.1UniSTS
Whitehead/MRC_RH1860.45UniSTS
Whitehead_YAC1 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001033373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001356389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006496048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006496049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011238531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_373255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC116995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC132361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC153652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK042881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC147314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC147315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC147758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC147763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC172036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000114248   ⟹   ENSMUSP00000109886
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl159,296,066 - 59,391,528 (+)Ensembl
GRCm38.p6 Ensembl159,256,907 - 59,352,369 (+)Ensembl
RefSeq Acc Id: ENSMUST00000160662   ⟹   ENSMUSP00000124680
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl159,296,065 - 59,392,152 (+)Ensembl
GRCm38.p6 Ensembl159,256,906 - 59,352,993 (+)Ensembl
RefSeq Acc Id: ENSMUST00000162487
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl159,296,287 - 59,297,037 (+)Ensembl
GRCm38.p6 Ensembl159,257,128 - 59,257,878 (+)Ensembl
RefSeq Acc Id: ENSMUST00000162906
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl159,338,095 - 59,391,607 (+)Ensembl
GRCm38.p6 Ensembl159,298,936 - 59,352,448 (+)Ensembl
RefSeq Acc Id: NM_001033373   ⟹   NP_001028545
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39159,296,065 - 59,391,656 (+)NCBI
GRCm38159,256,906 - 59,352,497 (+)NCBI
MGSCv37159,313,751 - 59,409,213 (+)RGD
Celera159,774,052 - 59,869,619 (+)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001356389   ⟹   NP_001343318
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39159,296,065 - 59,391,656 (+)NCBI
GRCm38159,256,906 - 59,352,497 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006496048   ⟹   XP_006496111
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39159,296,030 - 59,391,514 (+)NCBI
GRCm38159,256,862 - 59,352,355 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006496049   ⟹   XP_006496112
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39159,296,029 - 59,391,514 (+)NCBI
GRCm38159,256,861 - 59,352,355 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011238531   ⟹   XP_011236833
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39159,324,938 - 59,391,514 (+)NCBI
GRCm38159,285,773 - 59,352,355 (+)NCBI
Sequence:
RefSeq Acc Id: XR_373255
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39159,296,030 - 59,391,514 (+)NCBI
GRCm38159,256,862 - 59,352,355 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_001028545   ⟸   NM_001033373
- Peptide Label: isoform 1
- UniProtKB: B2RVR3 (UniProtKB/Swiss-Prot),   B7ZWG3 (UniProtKB/Swiss-Prot),   Q3V3A1 (UniProtKB/Swiss-Prot),   E3W997 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006496111   ⟸   XM_006496048
- Peptide Label: isoform X1
- UniProtKB: E3W997 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006496112   ⟸   XM_006496049
- Peptide Label: isoform X2
- UniProtKB: E3W997 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011236833   ⟸   XM_011238531
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: NP_001343318   ⟸   NM_001356389
- Peptide Label: isoform 2
- UniProtKB: E3W997 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000124680   ⟸   ENSMUST00000160662
RefSeq Acc Id: ENSMUSP00000109886   ⟸   ENSMUST00000114248
Protein Domains
Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q3V3A1-F1-model_v2 AlphaFold Q3V3A1 1-433 view protein structure

Promoters
RGD ID:6873842
Promoter ID:EPDNEW_M372
Type:multiple initiation site
Name:Cdk15_1
Description:Mus musculus cyclin-dependent kinase 15 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38159,298,925 - 59,298,985EPDNEW
RGD ID:6817343
Promoter ID:MM_KWN:867
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Spleen
Transcripts:UC007BDR.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36159,345,851 - 59,346,351 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3583944 AgrOrtholog
Ensembl Genes ENSMUSG00000026023 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000114248 ENTREZGENE
  ENSMUST00000114248.3 UniProtKB/Swiss-Prot
  ENSMUST00000160662.8 UniProtKB/TrEMBL
Gene3D-CATH Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro CDK15_STKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:271697 UniProtKB/Swiss-Prot
MGD MGI:3583944 ENTREZGENE
NCBI Gene 271697 ENTREZGENE
PANTHER CELL DIVISION PROTEIN KINASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CYCLIN-DEPENDENT KINASE 15 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cdk15 PhenoGen
PROSITE PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART S_TKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B2RVR3 ENTREZGENE
  B7ZWG3 ENTREZGENE
  CDK15_MOUSE UniProtKB/Swiss-Prot
  E3W997 ENTREZGENE, UniProtKB/TrEMBL
  Q3V3A1 ENTREZGENE
UniProt Secondary B2RVR3 UniProtKB/Swiss-Prot
  B7ZWG3 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-05-02 Cdk15  cyclin dependent kinase 15  Cdk15  cyclin-dependent kinase 15  Symbol and/or name change 5135510 APPROVED