Ndufs1 (NADH:ubiquinone oxidoreductase core subunit S1) - Rat Genome Database

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Gene: Ndufs1 (NADH:ubiquinone oxidoreductase core subunit S1) Mus musculus
Analyze
Symbol: Ndufs1
Name: NADH:ubiquinone oxidoreductase core subunit S1
RGD ID: 1551403
MGI Page MGI
Description: Enables NADH dehydrogenase (ubiquinone) activity. Involved in mitochondrial respiratory chain complex I assembly. Located in mitochondrion. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; integumental system; and sensory organ. Human ortholog(s) of this gene implicated in inherited metabolic disorder; mitochondrial complex I deficiency; and nuclear type mitochondrial complex I deficiency 5. Orthologous to human NDUFS1 (NADH:ubiquinone oxidoreductase core subunit S1); PARTICIPATES IN Alzheimer's disease pathway; Huntington's disease pathway; oxidative phosphorylation pathway; INTERACTS WITH 1,2-dimethylhydrazine; 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 5830412M15Rik; 9930026A05Rik; CI-75kD; complex I-75kD; MGC19199; MGC7850; NADH dehydrogenase (ubiquinone) Fe-S protein 1; NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39163,182,751 - 63,215,981 (-)NCBIGRCm39mm39
GRCm39 Ensembl163,182,755 - 63,215,992 (-)Ensembl
GRCm38163,143,592 - 63,176,822 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl163,143,596 - 63,176,833 (-)EnsemblGRCm38mm10GRCm38
MGSCv37163,190,166 - 63,223,396 (-)NCBIGRCm37mm9NCBIm37
MGSCv36163,077,874 - 63,110,985 (-)NCBImm8
Celera163,653,959 - 63,687,212 (-)NCBICelera
Cytogenetic Map1C2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-epicatechin-3-O-gallate  (ISO)
(+)-schisandrin B  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
(R,R)-tramadol  (ISO)
1,2-dimethylhydrazine  (EXP)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (EXP)
17alpha-ethynylestradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2,6-dinitrotoluene  (ISO)
2-hydroxypropanoic acid  (ISO)
3-chloropropane-1,2-diol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
acrolein  (ISO)
aflatoxin B1  (EXP,ISO)
alpha-naphthoflavone  (ISO)
alpha-pinene  (ISO)
amiodarone  (EXP)
Aroclor 1254  (EXP)
arsenous acid  (ISO)
aspartame  (EXP)
benzene  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (ISO)
Brodifacoum  (ISO)
cadmium atom  (EXP)
calcitriol  (ISO)
calcium atom  (ISO)
calcium(0)  (ISO)
clofibric acid  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) chloride  (EXP)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP)
dicrotophos  (ISO)
dioxygen  (ISO)
dopamine  (EXP)
doxorubicin  (EXP)
edaravone  (ISO)
ethanol  (EXP)
finasteride  (ISO)
flutamide  (ISO)
folic acid  (EXP)
gallic acid  (ISO)
gallocatechin  (ISO)
genistein  (ISO)
hydrazine  (ISO)
hydrogen peroxide  (ISO)
indometacin  (ISO)
iron atom  (ISO)
iron(0)  (ISO)
isoniazide  (EXP)
isotretinoin  (ISO)
ketamine  (ISO)
lamivudine  (EXP)
lead diacetate  (EXP)
lipopolysaccharide  (ISO)
methapyrilene  (ISO)
methylmercury chloride  (ISO)
methylmercury(1+)  (ISO)
monosodium L-glutamate  (EXP)
N-methyl-4-phenylpyridinium  (EXP)
ochratoxin A  (ISO)
oxaliplatin  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
phlorizin  (EXP)
pirinixic acid  (EXP)
Propiverine  (ISO)
pyrroloquinoline quinone  (ISO)
quercetin  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
sulforaphane  (EXP)
sunitinib  (EXP)
T-2 toxin  (ISO)
tapentadol  (ISO)
tetrachloromethane  (EXP,ISO)
toluene  (ISO)
topotecan  (ISO)
tramadol  (ISO)
tributylstannane  (ISO)
trichloroethene  (ISO)
triptonide  (EXP)
valproic acid  (ISO)
vinclozolin  (ISO)
zidovudine  (EXP,ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11812828   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:14681479   PMID:14691545  
PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16916647   PMID:16919269   PMID:17500595   PMID:17634366   PMID:17967808   PMID:18598756   PMID:18614015   PMID:18614564  
PMID:18799693   PMID:21267068   PMID:21278135   PMID:21556144   PMID:21873635   PMID:23419200   PMID:23788428   PMID:24194600   PMID:24457600   PMID:27626380   PMID:27799543   PMID:28378742  
PMID:30550785   PMID:30562941   PMID:32072193   PMID:32325033   PMID:33763166  


Genomics

Comparative Map Data
Ndufs1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39163,182,751 - 63,215,981 (-)NCBIGRCm39mm39
GRCm39 Ensembl163,182,755 - 63,215,992 (-)Ensembl
GRCm38163,143,592 - 63,176,822 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl163,143,596 - 63,176,833 (-)EnsemblGRCm38mm10GRCm38
MGSCv37163,190,166 - 63,223,396 (-)NCBIGRCm37mm9NCBIm37
MGSCv36163,077,874 - 63,110,985 (-)NCBImm8
Celera163,653,959 - 63,687,212 (-)NCBICelera
Cytogenetic Map1C2NCBI
NDUFS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2206,114,817 - 206,159,509 (-)EnsemblGRCh38hg38GRCh38
GRCh382206,114,817 - 206,159,444 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh372206,979,541 - 207,024,168 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362206,696,048 - 206,732,432 (-)NCBINCBI36hg18NCBI36
Build 342206,813,308 - 206,849,693NCBI
Celera2200,745,218 - 200,781,616 (-)NCBI
Cytogenetic Map2q33.3NCBI
HuRef2198,836,332 - 198,872,823 (-)NCBIHuRef
CHM1_12206,994,334 - 207,030,799 (-)NCBICHM1_1
Ndufs1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2964,546,430 - 64,579,751 (-)NCBImRatBN7.2
Rnor_6.0 Ensembl969,919,867 - 69,953,182 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0969,919,863 - 69,953,182 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0969,728,932 - 69,762,079 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4961,798,141 - 61,831,964 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1961,945,124 - 61,978,946 (-)NCBI
Celera961,964,379 - 61,997,783 (-)NCBICelera
Cytogenetic Map9q32NCBI
Ndufs1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554578,838,216 - 8,883,481 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554578,838,216 - 8,879,059 (+)NCBIChiLan1.0ChiLan1.0
NDUFS1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12B211,493,021 - 211,528,496 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B211,493,021 - 211,528,496 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02B93,363,092 - 93,399,326 (-)NCBIMhudiblu_PPA_v0panPan3
NDUFS1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13714,680,908 - 14,713,838 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3714,683,083 - 14,713,754 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3715,557,654 - 15,590,612 (-)NCBI
ROS_Cfam_1.03714,616,264 - 14,649,231 (-)NCBI
UMICH_Zoey_3.13714,570,542 - 14,603,481 (-)NCBI
UNSW_CanFamBas_1.03714,542,759 - 14,575,738 (-)NCBI
UU_Cfam_GSD_1.03714,539,074 - 14,572,034 (-)NCBI
Ndufs1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303162,868,082 - 162,903,922 (-)NCBI
SpeTri2.0NW_0049366312,503,353 - 2,538,957 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NDUFS1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15109,409,770 - 109,451,676 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115109,413,726 - 109,451,813 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215120,962,189 - 121,000,375 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NDUFS1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11091,893,337 - 91,927,559 (-)NCBI
ChlSab1.1 Ensembl1091,893,616 - 91,927,592 (-)Ensembl
Vero_WHO_p1.0NW_023666040107,451,554 - 107,485,782 (+)NCBI
Ndufs1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247659,962,254 - 9,993,790 (+)NCBI

Position Markers
Ndufs1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1C2UniSTS
cM Map1 UniSTS
G19935  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38163,177,272 - 63,177,858UniSTSGRCm38
MGSCv37163,223,846 - 63,224,432UniSTSGRCm37
Celera163,687,662 - 63,688,248UniSTS
Cytogenetic Map1C2UniSTS
RH66863  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38163,177,272 - 63,177,858UniSTSGRCm38
MGSCv37163,223,846 - 63,224,432UniSTSGRCm37
Celera163,687,662 - 63,688,248UniSTS
Cytogenetic Map1C2UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13824984Twq5_mtestis weight QTL 5 (mouse)13000000185000000Mouse
1357475w3q13_mweight 3 weeks QTL 13 (mouse)Not determined12307051073937756Mouse
1357822Lvrq3_mliver weight QTL 3 (mouse)Not determined13472105773937756Mouse
1357759W3q12_mweight 3 weeks QTL 12 (mouse)Not determined13472105773937756Mouse
1357651Lgq5_mlate growth QTL 5 (mouse)Not determined13472105773937756Mouse
1357506W10q6_mweight 10 weeks QTL 6 (mouse)Not determined13472105773937756Mouse
1357524W6q14_mweight 6 weeks QTL 14 (mouse)Not determined13472105773937756Mouse
1357824Estoq4_membryo survival total QTL 4 (mouse)Not determined13472105773937756Mouse
39128207Lwq16_mliver weight QTL 16 (mouse)13472105773937756Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134721057150318120Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134721057150318120Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134721057150318120Mouse
1301954Lrnx11_mlearning-contextual 11 (mouse)Not determined13909372774477206Mouse
1357721Sle17_msystematic lupus erythematosus susceptibility 17 (mouse)Not determined139093727126517573Mouse
12910780Pwgrq11_mpost-weaning growth rate QTL 11 (mouse)14082884867231097Mouse
12910786Pwgrq10_mpost-weaning growth rate QTL 10 (mouse)14082884867231097Mouse
12910788Pwgrq9_mpost-weaning growth rate QTL 9 (mouse)14082884867231097Mouse
1301166Thypr2_mthymocyte proliferative response 2 (mouse)Not determined14123396575234112Mouse
18182931Metl1_mmetabolite locus 1, pyridoxate (mouse)14123624075236240Mouse
4141032Wbcc1_mwhite blood cell count 1 (mouse)Not determined4222050876220508Mouse
1301714Vertcling_mvertical clinging (mouse)Not determined14289887276899008Mouse
1558855Eae30_mexperimental allergic encephalomyelitis susceptibility 30 (mouse)Not determined14537861372935898Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145744740189571420Mouse
1301670Ssta1_msusceptibility to Salmonella typhimurium antigens 1 (mouse)Not determined14590759679907723Mouse
1301225Sle7_msystematic lupus erythematosus susceptibility 7 (mouse)Not determined14681553180815680Mouse
1301616Yaa2_mY-linked autoimmune acceleration 2 (mouse)Not determined14681553180815680Mouse
1558905Gct7_mgranulosa cell tumorigenesis 7 (mouse)Not determined14731073581310854Mouse
1558822Vas1_mautoimmune vasitis resistance 1 (mouse)Not determined14884984782850051Mouse
1301211Bbaa11_mB.burgdorferi-associated arthritis 11 (mouse)Not determined14884984782850051Mouse
1301430Cdcs2_mcytokine deficiency colitis susceptibility 2 (mouse)Not determined14885318682853326Mouse
10043965Obq24_mobesity QTL 24 (mouse)Not determined15085105784851057Mouse
4141305Tgq9_mtriglyceride QTL 9 (mouse)Not determined5138244685382446Mouse
4142307Shali1_msurvival time to hyperoxic acute lung injury 1 (mouse)Not determined5192486670367430Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52418578182423027Mouse
1357741Nidd5k_mNidd5 on KK-A<y> (mouse)Not determined15593578989935898Mouse
1357505Vtbt1_mvertebral trabecular bone trait 1 (mouse)Not determined15622705590227201Mouse
4142467Wbcq1_mwhite blood cell quantitative locus 1 (mouse)Not determined15622705590227201Mouse
1301933Insq6_minsulin QTL 6 (mouse)Not determined15668776390687918Mouse
1558717Ses1a_msalmonella enteritidis susceptibility 1a (mouse)Not determined15668776390687918Mouse
14746998Mancz1_mmandible centroid size 1 (mouse)15790219291902192Mouse
14747009Manh49_mmandible shape 49 (mouse)15790219291902192Mouse
1300746Skl1_mskeletal size (tail length) 1 (mouse)Not determined15795281891952921Mouse
1357679Egrm1_mearly growth rate, maternal effect 1 (mouse)Not determined15795281891952921Mouse
1301162Skull1_mskull morphology 1 (mouse)Not determined15795281891952921Mouse
1301444Alcw5_malcohol withdrawal 5 (mouse)Not determined15857254792572799Mouse
1301667Lxw5_mlupus BXSB x NZW 5 (mouse)Not determined15857254792572799Mouse
1301748Abbp1_mA/J and C57BL/6 blood pressure 1 (mouse)Not determined162907596120601949Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:130
Count of miRNA genes:84
Interacting mature miRNAs:88
Transcripts:ENSMUST00000027111, ENSMUST00000140612, ENSMUST00000168099
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001160038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001160039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001160040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_145518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006495952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030253694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK034597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK142711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL645950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV444601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC015300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG808119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU708393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY709888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN715066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000027111   ⟹   ENSMUSP00000027111
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl163,143,596 - 63,176,822 (-)Ensembl
RefSeq Acc Id: ENSMUST00000140612
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl163,158,902 - 63,176,667 (-)Ensembl
RefSeq Acc Id: ENSMUST00000168099   ⟹   ENSMUSP00000126621
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl163,143,735 - 63,176,732 (-)Ensembl
RefSeq Acc Id: ENSMUST00000185412   ⟹   ENSMUSP00000140467
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl163,169,253 - 63,176,793 (-)Ensembl
RefSeq Acc Id: ENSMUST00000185732   ⟹   ENSMUSP00000140307
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl163,165,014 - 63,176,666 (-)Ensembl
RefSeq Acc Id: ENSMUST00000185827
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl163,156,683 - 63,176,669 (-)Ensembl
RefSeq Acc Id: ENSMUST00000185847   ⟹   ENSMUSP00000141190
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl163,150,066 - 63,176,663 (-)Ensembl
RefSeq Acc Id: ENSMUST00000186569
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl163,150,233 - 63,152,842 (-)Ensembl
RefSeq Acc Id: ENSMUST00000187756   ⟹   ENSMUSP00000140072
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl163,143,689 - 63,147,391 (-)Ensembl
RefSeq Acc Id: ENSMUST00000187835
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl163,143,604 - 63,147,723 (-)Ensembl
RefSeq Acc Id: ENSMUST00000188370   ⟹   ENSMUSP00000139664
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl163,163,839 - 63,176,690 (-)Ensembl
RefSeq Acc Id: ENSMUST00000189664   ⟹   ENSMUSP00000140819
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl163,170,853 - 63,176,833 (-)Ensembl
RefSeq Acc Id: ENSMUST00000190095
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl163,143,596 - 63,144,961 (-)Ensembl
RefSeq Acc Id: NM_001160038   ⟹   NP_001153510
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39163,182,751 - 63,215,981 (-)NCBI
GRCm38163,143,592 - 63,176,822 (-)ENTREZGENE
MGSCv37163,190,166 - 63,223,396 (-)RGD
Celera163,653,959 - 63,687,212 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001160039   ⟹   NP_001153511
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39163,182,751 - 63,215,981 (-)NCBI
GRCm38163,143,592 - 63,176,822 (-)ENTREZGENE
MGSCv37163,190,166 - 63,223,396 (-)RGD
Celera163,653,959 - 63,687,212 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001160040   ⟹   NP_001153512
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39163,182,751 - 63,215,981 (-)NCBI
GRCm38163,143,592 - 63,176,822 (-)ENTREZGENE
MGSCv37163,190,166 - 63,223,396 (-)RGD
Celera163,653,959 - 63,687,212 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_145518   ⟹   NP_663493
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39163,182,751 - 63,215,981 (-)NCBI
GRCm38163,143,592 - 63,176,822 (-)ENTREZGENE
MGSCv37163,190,166 - 63,223,396 (-)RGD
Celera163,653,959 - 63,687,212 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006495952   ⟹   XP_006496015
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39163,182,751 - 63,215,856 (-)NCBI
GRCm38163,143,592 - 63,176,697 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030253694   ⟹   XP_030109554
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39163,182,751 - 63,215,833 (-)NCBI
GRCm38163,143,592 - 63,176,780 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164413   ⟹   XP_036020306
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39163,182,751 - 63,215,621 (-)NCBI
RefSeq Acc Id: XM_036164417   ⟹   XP_036020310
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39163,182,751 - 63,215,800 (-)NCBI
RefSeq Acc Id: XM_036164421   ⟹   XP_036020314
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39163,182,751 - 63,215,779 (-)NCBI
RefSeq Acc Id: XM_036164425   ⟹   XP_036020318
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39163,182,751 - 63,215,676 (-)NCBI
RefSeq Acc Id: XM_036164427   ⟹   XP_036020320
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39163,182,751 - 63,215,840 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_663493   ⟸   NM_145518
- Peptide Label: precursor
- UniProtKB: Q91VD9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001153510   ⟸   NM_001160038
- Peptide Label: precursor
- UniProtKB: Q91VD9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001153511   ⟸   NM_001160039
- Peptide Label: precursor
- UniProtKB: Q91VD9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001153512   ⟸   NM_001160040
- Peptide Label: precursor
- UniProtKB: Q91VD9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006496015   ⟸   XM_006495952
- Peptide Label: isoform X1
- UniProtKB: Q91VD9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030109554   ⟸   XM_030253694
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000027111   ⟸   ENSMUST00000027111
RefSeq Acc Id: ENSMUSP00000140467   ⟸   ENSMUST00000185412
RefSeq Acc Id: ENSMUSP00000140307   ⟸   ENSMUST00000185732
RefSeq Acc Id: ENSMUSP00000141190   ⟸   ENSMUST00000185847
RefSeq Acc Id: ENSMUSP00000139664   ⟸   ENSMUST00000188370
RefSeq Acc Id: ENSMUSP00000140072   ⟸   ENSMUST00000187756
RefSeq Acc Id: ENSMUSP00000126621   ⟸   ENSMUST00000168099
RefSeq Acc Id: ENSMUSP00000140819   ⟸   ENSMUST00000189664
RefSeq Acc Id: XP_036020320   ⟸   XM_036164427
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036020310   ⟸   XM_036164417
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036020314   ⟸   XM_036164421
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036020318   ⟸   XM_036164425
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036020306   ⟸   XM_036164413
- Peptide Label: isoform X1
Promoters
RGD ID:6873910
Promoter ID:EPDNEW_M406
Type:initiation region
Name:Ndufs1_1
Description:Mus musculus NADH dehydrogenase Fe-S protein 1 , transcript variant4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38163,176,667 - 63,176,727EPDNEW
RGD ID:6846628
Promoter ID:MM_ACW:1101
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:NDUFS1.OSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36163,190,016 - 63,190,516 (-)MPROMDB
RGD ID:6817635
Promoter ID:MM_KWN:953
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_001160038,   NM_001160039,   NM_001160040,   NM_145518,   OTTMUST00000005070,   OTTMUST00000005071,   OTTMUST00000047129,   OTTMUST00000047130,   OTTMUST00000047131,   OTTMUST00000047132,   OTTMUST00000047133,   UC007BFX.1,   UC007BFY.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36163,222,236 - 63,224,202 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2443241 AgrOrtholog
Ensembl Genes ENSMUSG00000025968 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000027111 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000126621 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000139664 UniProtKB/TrEMBL
  ENSMUSP00000140072 UniProtKB/TrEMBL
  ENSMUSP00000140307 UniProtKB/TrEMBL
  ENSMUSP00000140467 UniProtKB/TrEMBL
  ENSMUSP00000140819 UniProtKB/TrEMBL
  ENSMUSP00000141190 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000027111 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000168099 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000185412 UniProtKB/TrEMBL
  ENSMUST00000185732 UniProtKB/TrEMBL
  ENSMUST00000185847 UniProtKB/TrEMBL
  ENSMUST00000187756 UniProtKB/TrEMBL
  ENSMUST00000188370 UniProtKB/TrEMBL
  ENSMUST00000189664 UniProtKB/TrEMBL
InterPro 2Fe-2S_ferredoxin-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2Fe-2S_ferredoxin-type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mopterin_OxRdtase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mopterin_OxRdtase_4Fe-4S_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NADH_UbQ_OxRdtase_75kDa_su_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NADH_UbQ_OxRdtase_Gsu UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NuoG_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:227197 UniProtKB/Swiss-Prot
MGD MGI:2443241 ENTREZGENE
NCBI Gene 227197 ENTREZGENE
Pfam Molybdopterin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NADH-G_4Fe-4S_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NADH_dhqG_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ndufs1 PhenoGen
PROSITE 2FE2S_FER_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  4FE4S_HC3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  4FE4S_MOW_BIS_MGD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  COMPLEX1_75K_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  COMPLEX1_75K_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  COMPLEX1_75K_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART NADH-G_4Fe-4S_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54292 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs NuoG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A087WP77_MOUSE UniProtKB/TrEMBL
  A0A087WQ77_MOUSE UniProtKB/TrEMBL
  A0A087WQR0_MOUSE UniProtKB/TrEMBL
  A0A087WR47_MOUSE UniProtKB/TrEMBL
  A0A087WRY4_MOUSE UniProtKB/TrEMBL
  A0A087WSU3_MOUSE UniProtKB/TrEMBL
  NDUS1_MOUSE UniProtKB/Swiss-Prot
  Q3TIU7_MOUSE UniProtKB/TrEMBL
  Q3UIQ2_MOUSE UniProtKB/TrEMBL
  Q91VD9 ENTREZGENE
UniProt Secondary Q3UQ73 UniProtKB/Swiss-Prot
  Q8BM16 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-22 Ndufs1  NADH:ubiquinone oxidoreductase core subunit S1    NADH dehydrogenase (ubiquinone) Fe-S protein 1  Symbol and/or name change 5135510 APPROVED