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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to lipopolysaccharide
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Accession:GO:0071222 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.
Synonyms:exact_synonym: cellular response to LPS
 broad_synonym: cellular response to endotoxin


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cellular response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:246,144,277...246,278,492
Ensembl chr 1:246,144,277...246,278,492 		JBrowse link
G ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1 ISO RGD PMID:20300455 RGD:39456124 NCBI chr 9:93,049,955...93,146,469 JBrowse link
G ABCC2 ATP binding cassette subfamily C member 2 ISO RGD PMID:20702406 RGD:11081005 NCBI chr14:110,955,698...111,038,898
Ensembl chr14:110,955,633...111,037,537 		JBrowse link
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8806812) Ensembl
MGI		 PMID:8806812 GO_REF:0000107 NCBI chr 1:270,761,641...270,906,708
Ensembl chr 1:270,761,668...270,906,708 		JBrowse link
G ACOD1 aconitate decarboxylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:49,077,152...49,088,218
Ensembl chr11:49,077,492...49,087,104 		JBrowse link
G ADAM9 ADAM metallopeptidase domain 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:47,523,768...47,601,722
Ensembl chr15:47,523,771...47,601,710 		JBrowse link
G ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:22871409 RGD:7207038 NCBI chr 1:273,022,014...273,066,916
Ensembl chr 1:273,024,009...273,056,039 		JBrowse link
G AICDA activation induced cytidine deaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18762567) Ensembl
MGI		 PMID:18762567 GO_REF:0000107 NCBI chr 5:62,777,236...62,787,342
Ensembl chr 5:62,777,352...62,787,369 		JBrowse link
G AIF1 allograft inflammatory factor 1 ISO RGD PMID:18717813 RGD:2313015 NCBI chr 7:23,711,752...23,731,191
Ensembl chr 7:23,726,787...23,731,671 		JBrowse link
G AKAP8 A-kinase anchoring protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:62,222,060...62,241,631
Ensembl chr 2:62,222,249...62,241,611 		JBrowse link
G AMCF-II alveolar macrophage-derived chemotactic factor-II involved_in ISO
IBA		 RGD
GO_Central		 PMID:15778492 GO_REF:0000033 RGD:5135262 NCBI chr 8:70,008,225...70,010,360
Ensembl chr 8:70,008,162...70,010,358 		JBrowse link
G ANKRD1 ankyrin repeat domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:102,603,777...102,612,857
Ensembl chr14:102,603,777...102,612,839 		JBrowse link
G ARG1 arginase 1 ISO RGD PMID:9013624 RGD:4144055 NCBI chr 1:32,006,035...32,028,983
Ensembl chr 1:32,006,046...32,028,988 		JBrowse link
G ARG2 arginase 2 ISO RGD PMID:11250887 RGD:4144048 NCBI chr 7:91,343,987...91,385,911
Ensembl chr 7:91,343,988...91,385,909 		JBrowse link
G ARID5A AT-rich interaction domain 5A involved_in ISO (MGI:5887181|PMID:27671645) UniProt PMID:27671645 MGI:5887181 NCBI chr 3:46,701,628...46,714,121
Ensembl chr 3:46,701,632...46,714,113 		JBrowse link
G ASS1 argininosuccinate synthase 1 ISO alveolar macrophages RGD PMID:9879717 RGD:4139906 NCBI chr 1:270,531,434...270,586,364
Ensembl chr 1:270,531,589...270,586,364 		JBrowse link
G AXL AXL receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:49,245,802...49,277,917
Ensembl chr 6:49,245,673...49,277,914 		JBrowse link
G B2M beta-2-microglobulin involved_in ISO (PMID:23144825) UniProt PMID:23144825 NCBI chr 1:126,837,721...126,844,043
Ensembl chr 1:126,835,143...126,981,582 		JBrowse link
G BCL10 BCL10 immune signaling adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:130,645,427...130,653,317
Ensembl chr 4:130,645,216...130,657,995 		JBrowse link
G BCR BCR activator of RhoGEF and GTPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7889565) Ensembl
MGI		 PMID:7889565 GO_REF:0000107 NCBI chr14:49,208,662...49,322,109
Ensembl chr14:49,208,762...49,322,103 		JBrowse link
G BYSL bystin like ISO RGD PMID:15305856 RGD:2316201 NCBI chr 7:37,074,517...37,086,753
Ensembl chr 7:37,074,515...37,088,533 		JBrowse link
G CACTIN cactin, spliceosome C complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:75,049,250...75,065,990
Ensembl chr 2:75,049,261...75,065,299 		JBrowse link
G CAPN2 calpain 2 ISO RGD PMID:23390485 RGD:13792657 NCBI chr10:19,758,824...19,820,241
Ensembl chr10:19,758,757...19,820,246 		JBrowse link
G CASP1 caspase 1, apoptosis-related cysteine peptidase involved_in ISO (PMID:11536016)
(PMID:22464733)		 UniProt PMID:11536016 PMID:22464733 NCBI chr 9:35,188,066...35,199,364
Ensembl chr 9:35,186,420...35,200,328 		JBrowse link
G CASP7 caspase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:124,017,776...124,050,369
Ensembl chr14:124,019,164...124,050,365 		JBrowse link
G CCL2 chemokine (C-C motif) ligand 2 involved_in ISO (MGI:3699670|PMID:14662900) RGD
BHF-UCL		 PMID:8921263 PMID:14662900 MGI:3699670 RGD:8549522 NCBI chr12:40,798,109...40,800,013
Ensembl chr12:40,798,109...40,800,026 		JBrowse link
G CCL20 C-C motif chemokine ligand 20 ISO RGD PMID:15618187 RGD:7483631 NCBI chr15:129,172,743...129,176,069 JBrowse link
G CCL5 C-C motif chemokine ligand 5 ISO RGD PMID:20578038 RGD:4889899 NCBI chr12:39,652,731...39,659,121
Ensembl chr12:39,648,598...39,659,118 		JBrowse link
G CCR5 C-C motif chemokine receptor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:29,382,383...29,387,902
Ensembl chr13:29,383,303...29,387,895 		JBrowse link
G CD14 CD14 molecule involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:12594207) RGD
GO_Central
TreeGrafter
Ensembl
MGI		 PMID:12594207 PMID:22511970 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:7183752 NCBI chr 2:142,348,036...142,349,686
Ensembl chr 2:142,346,360...142,349,581 		JBrowse link
G CD180 CD180 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:10880523) Ensembl
MGI
GO_Central		 PMID:10880523 GO_REF:0000033 GO_REF:0000107 NCBI chr16:45,571,252...45,588,032
Ensembl chr16:45,571,173...45,588,066 		JBrowse link
G CD274 CD274 molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:216,646,378...216,792,731
Ensembl chr 1:216,660,041...216,792,724 		JBrowse link
G CD300LB CD300 molecule like family member b acts_upstream_of_or_within ISO (PMID:22772446) MGI PMID:22772446 NCBI chr12:6,637,290...6,646,459
Ensembl chr12:6,637,483...6,646,394 		JBrowse link
G CD36 CD36 molecule acts_upstream_of_or_within ISO (PMID:16061696) MGI PMID:16061696 NCBI chr 9:99,685,748...99,782,296
Ensembl chr 9:99,605,181...99,782,105 		JBrowse link
G CD40 CD40 molecule ISO RGD PMID:19271152 RGD:5491178 NCBI chr17:48,286,116...48,298,188
Ensembl chr17:48,286,029...48,298,528 		JBrowse link
G CD68 CD68 molecule involved_in ISO (MGI:6274946|PMID:16157452) ARUK-UCL PMID:16157452 MGI:6274946 NCBI chr12:52,874,754...52,877,256
Ensembl chr12:52,874,785...52,877,695 		JBrowse link
G CD80 CD80 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:19047410) TreeGrafter
MGI
GO_Central		 PMID:19047410 GO_REF:0000033 GO_REF:0000118 NCBI chr13:140,693,312...140,730,541
Ensembl chr13:140,693,382...140,728,976 		JBrowse link
G CD86 CD86 molecule acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:19047410) RGD
MGI
TreeGrafter
GO_Central		 PMID:19047410 PMID:21039614 GO_REF:0000033 GO_REF:0000118 RGD:4892198 NCBI chr13:138,427,573...138,504,307
Ensembl chr13:138,427,533...138,504,310 		JBrowse link
G CDC73 cell division cycle 73 involved_in ISO (MGI:5319608|PMID:17911113) UniProt PMID:17911113 MGI:5319608 NCBI chr10:575,075...667,618
Ensembl chr10:575,075...667,432 		JBrowse link
G CDK19 cyclin dependent kinase 19 ISO RGD PMID:20066559 RGD:9590278 NCBI chr 1:76,589,050...76,793,476
Ensembl chr 1:76,589,052...76,793,278 		JBrowse link
G CDK4 cyclin dependent kinase 4 acts_upstream_of_or_within ISO (PMID:8543804) MGI PMID:8543804 NCBI chr 5:23,039,206...23,041,959
Ensembl chr 5:23,038,891...23,042,061 		JBrowse link
G CEBPB CCAAT enhancer binding protein beta ISO RGD PMID:18405661 RGD:10401220 NCBI chr17:51,722,633...51,723,673
Ensembl chr17:51,722,426...51,724,305 		JBrowse link
G CEBPE CCAAT enhancer binding protein epsilon ISO RGD PMID:9593684 RGD:728287 NCBI chr 7:75,926,652...75,929,949
Ensembl chr 7:75,927,662...75,929,769 		JBrowse link
G CFH complement factor H acts_upstream_of_or_within ISO (PMID:19828624) RGD
MGI		 PMID:12121434 PMID:19828624 RGD:632369
G CHMP5 charged multivesicular body protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:33,212,769...33,227,237
Ensembl chr10:33,211,516...33,227,302 		JBrowse link
G CMPK2 cytidine/uridine monophosphate kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7751651) Ensembl
MGI		 PMID:7751651 GO_REF:0000107 NCBI chr 3:128,903,395...128,917,873
Ensembl chr 3:128,903,616...128,917,871 		JBrowse link
G CPEB1 cytoplasmic polyadenylation element binding protein 1 ISO RGD PMID:21620800 RGD:9685153 NCBI chr 7:52,329,054...52,382,408
Ensembl chr 7:52,304,472...52,383,732 		JBrowse link
G CSF2 colony stimulating factor 2 ISO RGD PMID:18387647 RGD:5131517 NCBI chr 2:134,354,724...134,357,155
Ensembl chr 2:134,354,724...134,357,155 		JBrowse link
G CSF3 colony stimulating factor 3 ISO RGD PMID:19732808 RGD:5133735 NCBI chr12:22,333,445...22,335,949
Ensembl chr12:22,333,449...22,338,753 		JBrowse link
G CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:48,700,629...48,729,480
Ensembl chr 2:48,700,974...48,729,307 		JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:10422773 GO_REF:0000107 RGD:4892028 NCBI chr13:23,944,386...23,957,567
Ensembl chr13:23,944,369...23,957,486 		JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:23776175) MGI
GO_Central
Ensembl		 PMID:23776175 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:71,693,641...71,695,948
Ensembl chr 8:71,693,339...71,695,948 		JBrowse link
G CXCL13 C-X-C motif chemokine ligand 13 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:73,071,261...73,077,342 JBrowse link
G CXCL16 C-X-C motif chemokine ligand 16 involved_in ISO (MGI:1891794|PMID:11017100) UniProt PMID:11017100 MGI:1891794 NCBI chr12:52,145,100...52,150,267 JBrowse link
G CXCL2 chemokine (C-X-C motif) ligand 2 ISO RGD PMID:16239643 RGD:5135237 NCBI chr 8:70,157,253...70,159,145
Ensembl chr 8:70,157,214...70,159,138 		JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 involved_in IEP
IBA
IEA		 GO_Central
Ensembl
RGD		 PMID:31442273 GO_REF:0000033 GO_REF:0000107, RGD:150540302 NCBI chr 8:69,932,646...69,935,861
Ensembl chr 8:69,932,643...69,935,861 		JBrowse link
G CXCL9 C-X-C motif chemokine ligand 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:71,665,541...71,670,236
Ensembl chr 8:71,663,501...71,670,271 		JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO RGD PMID:20665543 RGD:4145535 NCBI chr 7:59,172,829...59,188,479
Ensembl chr 7:59,175,758...59,188,478 		JBrowse link
G CYP17A1 cytochrome P450 family 17 subfamily A member 1 ISO RGD PMID:20665543 RGD:4145535 NCBI chr14:113,805,616...113,820,445
Ensembl chr14:113,805,611...113,812,041 		JBrowse link
G DAB2IP DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:261,732,280...261,859,833
Ensembl chr 1:261,659,660...261,859,022 		JBrowse link
G EDNRB endothelin receptor type B ISO RGD PMID:18091567 RGD:4892289 NCBI chr11:50,073,300...50,102,879
Ensembl chr11:50,072,554...50,102,884 		JBrowse link
G EFNB2 ephrin B2 ISO RGD PMID:33794069 RGD:127285659 NCBI chr11:74,188,337...74,232,768
Ensembl chr11:74,186,640...74,233,354 		JBrowse link
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 ISO RGD PMID:23990338 RGD:9685490 NCBI chr14:107,263,546...107,390,923
Ensembl chr14:107,263,449...107,389,010 		JBrowse link
G ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 ISO RGD PMID:23990338 RGD:9685490
G EPAS1 endothelial PAS domain protein 1 ISO RGD PMID:12099714 RGD:11041576 NCBI chr 3:94,167,759...94,253,662
Ensembl chr 3:94,165,816...94,254,079 		JBrowse link
G EPHB2 EPH receptor B2 ISO RGD PMID:33794069 RGD:127285659 NCBI chr 6:80,649,098...80,849,979
Ensembl chr 6:80,650,740...80,843,567 		JBrowse link
G ESR2 estrogen receptor 2 ISO negative regulation of cell death RGD PMID:21127968 RGD:5508811 NCBI chr 1:193,823,666...193,907,330
Ensembl chr 1:193,829,560...193,906,565 		JBrowse link
G FCAR Fc alpha receptor involved_in ISO (PMID:25339672) CAFA PMID:25339672 NCBI chr 6:59,074,979...59,084,798
Ensembl chr 6:59,074,996...59,084,788 		JBrowse link
G FCGR2B Fc fragment of IgG, low affinity IIb, receptor (CD32) ISO RGD PMID:19106808 RGD:5147925 NCBI chr 4:88,873,762...88,892,964 JBrowse link
G FCGR3A Fc fragment of IgG receptor IIIa ISO RGD PMID:19106808 RGD:5147925 NCBI chr 4:88,948,357...88,956,513 JBrowse link
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:30250515 RGD:25330356 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,724 		JBrowse link
G FN1 fibronectin 1 ISO RGD PMID:11819312 RGD:7205475 NCBI chr15:117,658,158...117,737,145
Ensembl chr15:117,658,099...117,731,014 		JBrowse link
G FUBP1 far upstream element binding protein 1 ISO RGD PMID:23797733 RGD:13673879 NCBI chr 6:135,281,474...135,319,055
Ensembl chr 6:135,281,521...135,318,714 		JBrowse link
G GATA1 GATA binding protein 1 ISO RGD PMID:17687519 RGD:5131526 NCBI chr  X:42,898,431...42,905,939
Ensembl chr  X:42,898,442...42,905,976 		JBrowse link
G GBP1 guanylate binding protein 1, interferon-inducible involved_in ISO (MGI:5565107|PMID:24715728) UniProt PMID:24715728 MGI:5565107 NCBI chr 4:127,425,699...127,442,132
Ensembl chr 4:127,425,200...127,442,127 		JBrowse link
G GBP2 guanylate binding protein 2, interferon-inducible involved_in
acts_upstream_of_or_within		 ISO (MGI:5565107|PMID:24715728)
(PMID:18025219)		 UniProt
MGI		 PMID:18025219 PMID:24715728 MGI:5565107 NCBI chr 4:127,387,222...127,408,729
Ensembl chr 4:127,379,740...127,408,699 		JBrowse link
G GFER growth factor, augmenter of liver regeneration ISO RGD PMID:23073658 RGD:9685733 NCBI chr 3:39,981,938...39,984,451
Ensembl chr 3:39,981,940...39,984,991 		JBrowse link
G GFI1 growth factor independent 1 transcriptional repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:124,619,887...124,629,638
Ensembl chr 4:124,621,261...124,629,638 		JBrowse link
G GHSR growth hormone secretagogue receptor ISO RGD PMID:15155262 RGD:12905047 NCBI chr13:110,981,465...111,006,149
Ensembl chr13:110,983,298...111,038,324 		JBrowse link
G GIT1 GIT ArfGAP 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:45,768,172...45,783,652
Ensembl chr12:45,768,176...45,783,658 		JBrowse link
G GRK6 G protein-coupled receptor kinase 6 ISO RGD PMID:23359120 RGD:13792782 NCBI chr 2:80,496,105...80,527,208
Ensembl chr 2:80,508,979...80,527,210 		JBrowse link
G HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:112,712,894...112,753,121
Ensembl chr 3:112,704,024...112,753,086 		JBrowse link
G HAMP hepcidin antimicrobial peptide ISO RGD PMID:23506423 RGD:11041627 NCBI chr 6:44,785,863...44,787,303
Ensembl chr 6:44,784,160...44,787,305 		JBrowse link
G HAVCR2 hepatitis A virus cellular receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:66,138,157...66,160,568
Ensembl chr16:66,139,535...66,160,538 		JBrowse link
G HDAC5 histone deacetylase 5 ISO RGD PMID:22933299 RGD:9590257 NCBI chr12:19,077,910...19,119,463
Ensembl chr12:19,078,005...19,121,154 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ISO RGD PMID:19940979 RGD:5147884 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,244...190,674,845 		JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (MGI:6244743|PMID:28096568) ARUK-UCL PMID:28096568 MGI:6244743 NCBI chr11:7,195,556...7,321,071 JBrowse link
G HMGB2 high mobility group box 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:16,709,966...16,712,288
Ensembl chr14:16,710,047...16,717,101 		JBrowse link
G HNRNPM heterogeneous nuclear ribonucleoprotein M ISO RGD PMID:14597422 RGD:10054261 NCBI chr 2:70,813,745...70,858,903
Ensembl chr 2:70,813,745...70,862,586 		JBrowse link
G HSF1 heat shock transcription factor 1 ISO RGD PMID:21540803 RGD:10402943 NCBI chr 4:463,531...486,483
Ensembl chr 4:463,393...486,473 		JBrowse link
G ICAM1 intercellular adhesion molecule 1 ISO RGD PMID:20674665 RGD:4145373 NCBI chr 2:69,097,136...69,107,722
Ensembl chr 2:69,097,122...69,108,205 		JBrowse link
G IFNB1 interferon beta 1 ISO RGD PMID:18412159 RGD:401854236 NCBI chr 1:201,850,935...201,851,495
Ensembl chr 1:201,850,935...201,851,495 		JBrowse link
G IFNG interferon gamma acts_upstream_of_or_within ISO (PMID:18791161) MGI PMID:18791161 NCBI chr 5:32,477,906...32,482,670
Ensembl chr 5:32,477,906...32,482,670 		JBrowse link
G IL10 interleukin 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19047410), (PMID:21609717) Ensembl
MGI		 PMID:19047410 PMID:21609717 GO_REF:0000107 NCBI chr 9:67,400,727...67,405,941
Ensembl chr 9:67,400,728...67,405,378 		JBrowse link
G IL12A interleukin 12A acts_upstream_of_or_within ISO (PMID:19047410) MGI PMID:19047410 NCBI chr13:99,733,394...99,741,078
Ensembl chr13:99,733,394...99,741,078 		JBrowse link
G IL12B interleukin 12B acts_upstream_of_or_within ISO (PMID:18025219), (PMID:21606371) MGI PMID:18025219 PMID:21606371 NCBI chr16:64,143,268...64,158,929
Ensembl chr16:64,143,268...64,158,929 		JBrowse link
G IL18 interleukin 18 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:11739527 GO_REF:0000118 RGD:729357 NCBI chr 9:39,839,959...39,861,258
Ensembl chr 9:39,834,973...39,861,219 		JBrowse link
G IL1A interleukin 1 alpha involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:43,718,320...43,731,668
Ensembl chr 3:43,718,368...43,731,119 		JBrowse link
G IL1B interleukin 1 beta involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:43,670,126...43,677,125 JBrowse link
G IL1B2 interleukin 1, beta 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118
G IL24 interleukin 24 ISO RGD PMID:12182458 RGD:5147432 NCBI chr 9:67,525,246...67,532,407
Ensembl chr 9:67,525,557...67,530,738 		JBrowse link
G IL6 interleukin 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19047410), (PMID:21606371)
(PMID:23776175)		 RGD
MGI
Ensembl		 PMID:2789217 PMID:19047410 PMID:21606371 PMID:23776175 GO_REF:0000107 RGD:11049548 NCBI chr 9:91,506,421...91,510,830
Ensembl chr 9:91,506,421...91,511,263 		JBrowse link
G IRAK1 interleukin 1 receptor associated kinase 1 involved_in ISO
IBA		 RGD
GO_Central		 PMID:15793310 GO_REF:0000033 RGD:1579809 NCBI chr  X:124,717,604...124,724,855
Ensembl chr  X:124,717,612...124,724,860 		JBrowse link
G IRAK2 interleukin 1 receptor associated kinase 2 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr13:66,350,606...66,416,834
Ensembl chr13:66,350,606...66,416,827 		JBrowse link
G IRAK3 interleukin 1 receptor associated kinase 3 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:30,524,704...30,601,067
Ensembl chr 5:30,526,793...30,609,921 		JBrowse link
G IRAK4 interleukin 1 receptor associated kinase 4 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:74,842,184...74,858,125
Ensembl chr 5:74,834,600...74,859,344 		JBrowse link
G IRF3 interferon regulatory factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21606371) Ensembl
MGI		 PMID:21606371 GO_REF:0000107 NCBI chr 6:54,701,733...54,706,079
Ensembl chr 6:54,701,668...54,707,151 		JBrowse link
G IRF8 interferon regulatory factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9348310) Ensembl
MGI		 PMID:9348310 GO_REF:0000107 NCBI chr 6:3,041,617...3,060,685
Ensembl chr 6:3,041,645...3,097,406 		JBrowse link
G JAK2 Janus kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21606371) Ensembl
MGI		 PMID:21606371 GO_REF:0000107 NCBI chr 1:216,849,744...217,002,310
Ensembl chr 1:216,848,689...217,002,148 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit involved_in IDA (PMID:25110868) AgBase PMID:25110868 NCBI chr 6:153,686,425...153,687,635
Ensembl chr 6:153,685,682...153,687,636 		JBrowse link
G KLRK1 killer cell lectin like receptor K1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14764662) Ensembl
MGI		 PMID:14764662 GO_REF:0000107 NCBI chr 5:61,646,691...61,655,386
Ensembl chr 5:61,647,043...61,656,192 		JBrowse link
G KMO kynurenine 3-monooxygenase ISO RGD PMID:26524415 RGD:13703043 NCBI chr10:12,442,877...12,489,417
Ensembl chr10:12,434,769...12,490,409 		JBrowse link
G LBP lipopolysaccharide binding protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12594207) MGI
Ensembl		 PMID:12594207 GO_REF:0000107 NCBI chr17:41,398,935...41,429,467
Ensembl chr17:41,393,818...41,429,551 		JBrowse link
G LCN2 lipocalin 2 ISO RGD PMID:19329498 RGD:2316495 NCBI chr 1:268,609,975...268,614,651
Ensembl chr 1:268,609,887...268,614,644 		JBrowse link
G LDOC1 LDOC1 regulator of NFKB signaling involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:115,580,622...115,583,129
Ensembl chr  X:115,579,486...115,584,357 		JBrowse link
G LITAF lipopolysaccharide induced TNF factor acts_upstream_of_or_within ISO (PMID:16954198) MGI PMID:16954198 NCBI chr 3:31,482,605...31,576,211
Ensembl chr 3:31,482,353...31,579,082 		JBrowse link
G LOC100739163 glutathione S-transferase P-like involved_in ISO (MGI:5009411|PMID:16023107) BHF-UCL PMID:16023107 MGI:5009411 NCBI chr 2:4,978,761...4,982,233 JBrowse link
G LOC110255221 antibacterial peptide PMAP-37 ISO RGD PMID:19879657 RGD:2316237 NCBI chr13:31,011,029...31,013,164 JBrowse link
G LOC110255300 interleukin-1 beta-like involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118
G LOC110258095 interleukin-1 beta-like involved_in IBA GO_Central GO_REF:0000033
G LOC110258125 interleukin-1 beta-like involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118
G LOC110258578 interleukin-1 beta-like involved_in ISO
IEA
IBA		 RGD
TreeGrafter
GO_Central		 PMID:23200736 GO_REF:0000033 GO_REF:0000118 RGD:7175528
G LOC110258579 interleukin-1 beta-like involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118
G LOC110258582 interleukin-1 beta-like involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118
G LOC110259156 interleukin-1 beta-like involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118
G LOC110260333 hydroxymethylglutaryl-CoA synthase, mitochondrial-like ISO RGD PMID:11578593 RGD:1599044 NCBI chr 4:101,385,486...101,404,273
Ensembl chr 4:101,385,512...101,443,405 		JBrowse link
G LTC4S leukotriene C4 synthase ISO RGD PMID:9794912 RGD:2316634 NCBI chr 2:78,799,446...78,802,281
Ensembl chr 2:78,799,449...78,802,285 		JBrowse link
G LY96 lymphocyte antigen 96 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:61,919,806...61,950,712
Ensembl chr 4:61,926,064...61,950,697 		JBrowse link
G MALT1 MALT1 paracaspase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:162,076,933...162,144,915
Ensembl chr 1:162,076,955...162,144,880 		JBrowse link
G MAP2K3 mitogen-activated protein kinase kinase 3 ISO RGD PMID:14670949 RGD:7495812 NCBI chr12:61,396,337...61,417,333
Ensembl chr12:61,396,369...61,417,321 		JBrowse link
G MAP2K7 mitogen-activated protein kinase kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:71,299,010...71,308,432
Ensembl chr 2:71,298,325...71,308,124 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23776175) MGI
Ensembl		 PMID:23776175 GO_REF:0000107 NCBI chr 7:31,791,398...31,861,544
Ensembl chr 7:31,790,877...31,862,031 		JBrowse link
G MAPK8 mitogen-activated protein kinase 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23776175) MGI
Ensembl		 PMID:23776175 GO_REF:0000107 NCBI chr14:88,988,914...89,108,875
Ensembl chr14:88,988,949...89,108,874 		JBrowse link
G MAPK9 mitogen-activated protein kinase 9 ISO RGD PMID:9475517 RGD:2304245 NCBI chr 2:78,338,466...78,399,108
Ensembl chr 2:78,338,376...78,399,100 		JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:96,122,407...96,296,927
Ensembl chr 2:96,124,168...96,296,810 		JBrowse link
G MIR107 microRNA mir-107 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr14:101,420,743...101,420,829
Ensembl chr14:101,420,743...101,420,829 		JBrowse link
G MIR10A microRNA mir-10a acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr12:24,833,644...24,833,723
Ensembl chr12:24,833,627...24,833,730 		JBrowse link
G MIR125A microRNA mir-125a acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 6:58,331,566...58,331,645
Ensembl chr 6:58,331,566...58,331,645 		JBrowse link
G MIR128-1 microRNA mir-128-1 involved_in ISO (PMID:24415783) BHF-UCL PMID:24415783 NCBI chr15:16,273,557...16,273,638
Ensembl chr15:16,273,551...16,273,659 		JBrowse link
G MIR128-2 microRNA mir-128-2 involved_in ISO (PMID:24415783) BHF-UCL PMID:24415783 NCBI chr13:21,038,445...21,038,524
Ensembl chr13:21,038,442...21,038,525 		JBrowse link
G MIR139 microRNA mir-139 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr 9:7,175,314...7,175,381
Ensembl chr 9:7,175,308...7,175,385 		JBrowse link
G MIR140 microRNA mir-140 involved_in
acts_upstream_of_or_within		 ISO (PMID:30321456)
(PMID:18762567)		 ARUK-UCL
MGI		 PMID:18762567 PMID:30321456 NCBI chr 6:17,077,530...17,077,599
Ensembl chr 6:17,077,507...17,077,620 		JBrowse link
G MIR142 microRNA mir-142 acts_upstream_of_or_within ISO (PMID:21536037) MGI PMID:21536037 NCBI chr12:34,609,378...34,609,457
Ensembl chr12:34,609,364...34,609,468 		JBrowse link
G MIR146B microRNA mir-146b acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr14:113,446,854...113,446,952 JBrowse link
G MIR150-1 microRNA mir-150-1 acts_upstream_of_or_within ISO (PMID:18762567), (PMID:21247879) MGI PMID:18762567 PMID:21247879 NCBI chr 6:54,580,912...54,580,988
Ensembl chr 6:54,580,912...54,580,988 		JBrowse link
G MIR155 microRNA mir-155 acts_upstream_of_or_within ISO (PMID:18762567), (PMID:21247879) MGI PMID:18762567 PMID:21247879 NCBI chr13:189,138,822...189,138,902
Ensembl chr13:189,138,822...189,138,902 		JBrowse link
G MIR15A microRNA mir-15a acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr11:17,757,463...17,757,541
Ensembl chr11:17,757,460...17,757,554 		JBrowse link
G MIR16-1 microRNA mir-16-1 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr13:100,083,329...100,083,405
Ensembl chr13:100,083,329...100,083,405 		JBrowse link
G MIR181A-1 microRNA mir-181a-1 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr10:21,696,653...21,696,756
Ensembl chr10:21,696,653...21,696,756 		JBrowse link
G MIR181A-2 microRNA mir-181a-2 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 1:265,497,249...265,497,328
Ensembl chr 1:265,497,249...265,497,328 		JBrowse link
G MIR181B-2 microRNA mir-181b-2 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 1:265,499,111...265,499,196
Ensembl chr 1:265,499,108...265,499,196 		JBrowse link
G MIR181C microRNA mir-181c acts_upstream_of_or_within ISO (PMID:18762567), (PMID:21247879) MGI PMID:18762567 PMID:21247879 NCBI chr 2:65,279,950...65,280,036
Ensembl chr 2:65,279,944...65,280,040 		JBrowse link
G MIR184 microRNA mir-184 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr 7:48,345,017...48,345,099
Ensembl chr 7:48,345,017...48,345,099 		JBrowse link
G MIR187 microRNA mir-187 involved_in ISO (PMID:23071313) ARUK-UCL PMID:23071313 NCBI chr 6:119,674,881...119,674,958 JBrowse link
G MIR193A microRNA mir-193a acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr12:43,336,969...43,337,048
Ensembl chr12:43,336,969...43,337,048 		JBrowse link
G MIR194B microRNA mir-194b acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr10:9,704,910...9,704,987
Ensembl chr10:9,704,910...9,704,987 		JBrowse link
G MIR199A-1 microRNA mir-199a-1 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr 9:114,533,783...114,533,858
Ensembl chr 9:114,533,777...114,533,880 		JBrowse link
G MIR199A-2 microRNA mir-199a-2 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr 2:69,558,051...69,558,130
Ensembl chr 2:69,558,050...69,558,131 		JBrowse link
G MIR205 microRNA mir-205 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 9:133,517,078...133,517,146
Ensembl chr 9:133,517,078...133,517,146 		JBrowse link
G MIR21 microRNA mir-21 involved_in ISO (PMID:19946272)
(PMID:29039542)		 RGD
BHF-UCL
ARUK-UCL		 PMID:19946272 PMID:29039542 PMID:30542412 RGD:41410885 NCBI chr12:36,065,267...36,065,358
Ensembl chr12:36,065,267...36,065,358 		JBrowse link
G MIR217-1 microRNA mir-217-1 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 3:85,341,255...85,341,361
Ensembl chr 3:85,341,255...85,341,361 		JBrowse link
G MIR224 microRNA mir-224 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18762567), (PMID:21247879) RNAcentral
MGI		 PMID:18762567 PMID:21247879 GO_REF:0000115 NCBI chr  X:123,283,427...123,283,507
Ensembl chr  X:123,283,427...123,283,507 		JBrowse link
G MIR23B microRNA mir-23b acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr10:27,080,197...27,080,276
Ensembl chr10:27,080,197...27,080,276 		JBrowse link
G MIR26A microRNA mir-26a acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 5:23,112,744...23,112,827
Ensembl chr 5:23,112,744...23,112,827 		JBrowse link
G MIR27A microRNA mir-27a acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 2:65,308,294...65,308,375
Ensembl chr 2:65,308,294...65,308,375 		JBrowse link
G MIR29A microRNA mir-29a acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr18:18,040,032...18,040,117
Ensembl chr18:18,040,032...18,040,118 		JBrowse link
G MIR29B-1 microRNA mir-29b-1 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr18:18,039,629...18,039,709
Ensembl chr18:18,039,629...18,039,709 		JBrowse link
G MIR29B-2 microRNA mir-29b-2 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 9:135,019,079...135,019,162
Ensembl chr 9:135,019,075...135,019,164 		JBrowse link
G MIR30B microRNA mir-30b acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 4:6,952,794...6,952,869
Ensembl chr 4:6,952,794...6,952,869 		JBrowse link
G MIR30C-1 microRNA mir-30c-1 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 6:170,426,781...170,426,860
Ensembl chr 6:170,426,781...170,426,860 		JBrowse link
G MIR30C-2 microRNA mir-30c-2 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 1:51,383,782...51,383,861
Ensembl chr 1:51,383,782...51,383,861 		JBrowse link
G MIR30D microRNA mir-30d acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 4:6,948,669...6,948,747
Ensembl chr 4:6,948,669...6,948,747 		JBrowse link
G MIR342 microRNA mir-342 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18762567), (PMID:21247879) RNAcentral
MGI		 PMID:18762567 PMID:21247879 GO_REF:0000115 NCBI chr 7:121,021,761...121,021,840
Ensembl chr 7:121,021,761...121,021,840 		JBrowse link
G MIR345-1 microRNA mir-345-1 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr 7:121,193,720...121,193,799
Ensembl chr 7:121,193,716...121,193,799 		JBrowse link
G MIR381 microRNA mir-381 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879
G MIR383 microRNA mir-383 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr17:2,698,041...2,698,122
Ensembl chr17:2,698,041...2,698,122 		JBrowse link
G MIR425 microRNA mir-425 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr13:31,654,994...31,655,073
Ensembl chr13:31,654,994...31,655,073 		JBrowse link
G MIR7-1 microRNA mir-7-1 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr 1:191,218,565...191,218,648
Ensembl chr 1:191,218,565...191,218,648 		JBrowse link
G MIR7-2 microRNA mir-7-2 acts_upstream_of_or_within ISO (PMID:21247879) MGI PMID:21247879 NCBI chr10:30,986,180...30,986,288
Ensembl chr10:30,986,180...30,986,288 		JBrowse link
G MIR98 microRNA mir-98 acts_upstream_of_or_within ISO (PMID:21609717) MGI PMID:21609717 NCBI chr  X:46,302,381...46,302,460
Ensembl chr  X:46,302,381...46,302,460 		JBrowse link
G MIRLET7A-1 microRNA let-7a-1 acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr 9:49,152,586...49,152,665
Ensembl chr 9:49,152,586...49,152,665 		JBrowse link
G MIRLET7G microRNA let-7g acts_upstream_of_or_within ISO (PMID:18762567) MGI PMID:18762567 NCBI chr13:34,406,140...34,406,219
Ensembl chr13:34,406,130...34,406,225 		JBrowse link
G MMP1 matrix metallopeptidase 1 ISO RGD PMID:21683124 RGD:7207286 NCBI chr 9:33,411,738...33,420,205
Ensembl chr 9:33,411,065...33,420,076 		JBrowse link
G MMP8 matrix metallopeptidase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:33,384,034...33,397,637
Ensembl chr 9:33,384,033...33,396,947 		JBrowse link
G MMP9 matrix metallopeptidase 9 ISO RGD PMID:21683124 RGD:7207286 NCBI chr17:48,179,690...48,186,782
Ensembl chr17:48,179,671...48,186,788 		JBrowse link
G MRC1 mannose receptor C-type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22832163) Ensembl
MGI		 PMID:22832163 GO_REF:0000107 NCBI chr10:44,107,926...44,226,734
Ensembl chr10:44,107,072...44,226,733 		JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor involved_in ISO (MGI:6355543|PMID:17660297) ARUK-UCL PMID:17660297 MGI:6355543 NCBI chr13:22,976,951...22,979,568
Ensembl chr13:22,966,137...22,983,109 		JBrowse link
G NCL nucleolin ISO RGD PMID:21309751 RGD:9686449 NCBI chr15:132,163,453...132,174,214
Ensembl chr15:132,162,516...132,174,172 		JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:23776175) RGD
Ensembl
MGI		 PMID:16842873 PMID:23776175 GO_REF:0000107 RGD:10045666 NCBI chr 8:118,391,010...118,478,927
Ensembl chr 8:118,390,638...118,506,691 		JBrowse link
G NFKBIB NFKB inhibitor beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20060382) Ensembl
MGI
TreeGrafter		 PMID:20060382 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:47,703,644...47,712,661
Ensembl chr 6:47,703,647...47,712,654 		JBrowse link
G NFKBIL1 NFKB inhibitor like 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:23,673,002...23,685,089
Ensembl chr 7:23,669,595...23,685,087 		JBrowse link
G NFKBIZ NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:157,261,419...157,273,119
Ensembl chr13:157,261,419...157,272,688 		JBrowse link
G NLRP3 NLR family pyrin domain containing 3 involved_in ISO (MGI:6095076|PMID:28847925)
(PMID:12483741)
(PMID:28847925)		 UniProt
BHF-UCL		 PMID:12483741 PMID:28847925 MGI:6095076 NCBI chr 2:56,892,241...56,977,412
Ensembl chr 2:56,892,243...56,977,228 		JBrowse link
G NLRP7 NLR family pyrin domain containing 7 involved_in ISO (PMID:15817483) UniProt PMID:15817483 NCBI chr 6:59,112,811...59,150,916 JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:34,132,127...34,167,446
Ensembl chr 6:34,130,938...34,177,534 		JBrowse link
G NOS2 nitric oxide synthase 2 acts_upstream_of_or_within ISO (PMID:18025219), (PMID:18791161) RGD
MGI		 PMID:18025219 PMID:18791161 PMID:21975807 RGD:5508737 NCBI chr12:44,174,944...44,219,875
Ensembl chr12:44,174,948...44,218,146 		JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,263,549...22,274,131
Ensembl chr12:22,263,657...22,271,643 		JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:15,315,283...15,336,785
Ensembl chr 2:15,315,282...15,334,820 		JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:83,607,222...83,732,668
Ensembl chr 5:83,604,294...83,684,604 		JBrowse link
G NUGGC nuclear GTPase, germinal center associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:11,775,684...11,826,162
Ensembl chr14:11,775,704...11,826,096 		JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:19098112 RGD:9590190 NCBI chr  X:57,521,091...57,558,467
Ensembl chr  X:57,521,098...57,558,515 		JBrowse link
G OPRK1 opioid receptor kappa 1 ISO RGD PMID:9645969 RGD:9831421 NCBI chr 4:77,399,298...77,429,025
Ensembl chr 4:77,399,183...77,426,879 		JBrowse link
G P2RY2 purinergic receptor P2Y2 ISO RGD PMID:18689605 RGD:2316659 NCBI chr 9:7,672,294...7,695,085
Ensembl chr 9:7,672,403...7,695,163 		JBrowse link
G PABPN1 poly(A) binding protein nuclear 1 involved_in ISO (MGI:5795816|PMID:22844456) UniProt PMID:22844456 MGI:5795816 NCBI chr 7:75,752,571...75,756,522
Ensembl chr 7:75,751,760...75,756,700 		JBrowse link
G PAF1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,046,487...48,053,631
Ensembl chr 6:48,046,502...48,052,038 		JBrowse link
G PARK7 Parkinsonism associated deglycase ISO RGD PMID:23847046 RGD:13462068 NCBI chr 6:68,629,327...68,645,147
Ensembl chr 6:68,629,214...68,645,516 		JBrowse link
G PDCD1LG2 programmed cell death 1 ligand 2 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:216,564,428...216,600,333
Ensembl chr 1:216,553,105...216,657,170 		JBrowse link
G PDCD4 programmed cell death 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:121,271,824...121,334,767
Ensembl chr14:121,305,629...121,338,740 		JBrowse link
G PDE2A phosphodiesterase 2A involved_in ISO (MGI:5294515|PMID:21571906) UniProt PMID:21571906 MGI:5294515 NCBI chr 9:7,136,637...7,227,966
Ensembl chr 9:7,136,644...7,227,964 		JBrowse link
G PDE4B phosphodiesterase 4B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15585880) Ensembl
MGI		 PMID:15585880 GO_REF:0000107 NCBI chr 6:146,167,262...146,720,105
Ensembl chr 6:146,166,688...146,719,682 		JBrowse link
G PDE4D phosphodiesterase 4D acts_upstream_of_or_within ISO (PMID:15585880) MGI PMID:15585880 NCBI chr16:37,897,300...39,406,534
Ensembl chr16:37,897,302...39,306,364 		JBrowse link
G PLAA phospholipase A2 activating protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:196,176,004...196,219,614
Ensembl chr 1:196,176,456...196,219,834 		JBrowse link
G PLAU plasminogen activator, urokinase ISO RGD PMID:19184369 RGD:7241806 NCBI chr14:76,629,313...76,635,173
Ensembl chr14:76,629,299...76,635,172 		JBrowse link
G PLSCR1 phospholipid scramblase 1 involved_in ISO (MGI:3762685|PMID:17590392) UniProt PMID:17590392 MGI:3762685 NCBI chr13:86,836,288...86,869,569
Ensembl chr13:86,834,587...86,869,297 		JBrowse link
G PLSCR3 phospholipid scramblase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:52,719,060...52,724,570
Ensembl chr12:52,719,064...52,724,982 		JBrowse link
G PLSCR4 phospholipid scramblase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:86,542,279...86,573,665
Ensembl chr13:86,542,283...86,573,629 		JBrowse link
G PPARD peroxisome proliferator activated receptor delta ISO RGD PMID:15728586 RGD:1580656 NCBI chr 7:31,222,533...31,295,221
Ensembl chr 7:31,222,585...31,295,211 		JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO RGD PMID:19853624 RGD:10059687 NCBI chr 8:17,841,844...18,527,953
Ensembl chr 8:17,841,844...17,946,992 		JBrowse link
G PPBP pro-platelet basic protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:70,021,468...70,022,490
Ensembl chr 8:70,021,439...70,023,964 		JBrowse link
G PPM1E protein phosphatase, Mg2+/Mn2+ dependent 1E involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:35,051,936...35,262,698
Ensembl chr12:35,051,952...35,262,703 		JBrowse link
G PRPF8 pre-mRNA processing factor 8 ISO RGD PMID:1345341 RGD:10045884 NCBI chr12:47,861,041...47,895,286
Ensembl chr12:47,861,043...47,895,190 		JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:14636300 RGD:10043359 NCBI chr 6:141,958,955...142,160,437
Ensembl chr 6:141,958,955...142,161,286 		JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:18769055 RGD:2300271 NCBI chr 9:127,850,164...127,858,866
Ensembl chr 9:127,850,015...127,858,884 		JBrowse link
G PYCARD PYD and CARD domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:17,305,921...17,307,521
Ensembl chr 3:17,306,099...17,307,786 		JBrowse link
G RARA retinoic acid receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,047,449...22,085,759
Ensembl chr12:22,047,443...22,085,673 		JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit involved_in ISO
IBA
IEA		 RGD
GO_Central
TreeGrafter
Ensembl		 PMID:9918814 PMID:15728586 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:1580656 RGD:2298880 NCBI chr 2:6,594,869...6,602,684
Ensembl chr 2:6,593,969...6,603,469 		JBrowse link
G RHOA ras homolog family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:31,918,484...31,991,207
Ensembl chr13:31,918,834...31,986,607 		JBrowse link
G RIC1 RIC1 homolog, RAB6A GEF complex partner 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:216,382,179...216,494,815
Ensembl chr 1:216,382,128...216,494,793 		JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11894097)
(PMID:11894098)		 Ensembl
MGI		 PMID:11894097 PMID:11894098 GO_REF:0000107 NCBI chr 4:47,026,558...47,075,133
Ensembl chr 4:47,027,098...47,074,704 		JBrowse link
G SBNO2 strawberry notch homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:77,278,059...77,320,371
Ensembl chr 2:77,275,013...77,320,367 		JBrowse link
G SELENOS selenoprotein S involved_in ISO (PMID:18675776) BHF-UCL PMID:18675776 NCBI chr 1:139,829,002...139,836,923
Ensembl chr 1:139,828,791...139,836,914 		JBrowse link
G SERPINE1 serpin family E member 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:20060032 GO_REF:0000107 RGD:13208812 NCBI chr 3:8,863,738...8,871,572
Ensembl chr 3:8,863,695...8,871,547 		JBrowse link
G SGMS1 sphingomyelin synthase 1 ISO RGD PMID:12353928 RGD:1302423 NCBI chr14:99,147,266...99,458,111
Ensembl chr14:99,147,272...99,185,082 		JBrowse link
G SHPK sedoheptulokinase involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:49,713,224...49,732,319
Ensembl chr12:49,712,177...49,732,246 		JBrowse link
G SIRPA signal regulatory protein alpha involved_in ISO (MGI:3760575|PMID:17954568) ARUK-UCL PMID:17954568 MGI:3760575 NCBI chr17:33,566,270...33,611,375 JBrowse link
G SLC12A2 solute carrier family 12 member 2 involved_in ISO (PMID:31786261) MGI PMID:31786261 NCBI chr 2:131,016,430...131,109,307
Ensembl chr 2:131,016,418...131,109,299 		JBrowse link
G SLC7A5 solute carrier family 7 member 5 ISO RGD PMID:29687865 RGD:151357004 NCBI chr 6:1,545,940...1,574,298
Ensembl chr 6:1,545,944...1,574,285 		JBrowse link
G SOCS1 suppressor of cytokine signaling 1 ISO RGD PMID:21742974 RGD:151347181 NCBI chr 3:31,879,143...31,883,041
Ensembl chr 3:31,881,225...31,884,967 		JBrowse link
G SPON2 spondin 2 acts_upstream_of_or_within ISO (PMID:14691481) MGI PMID:14691481 NCBI chr 8:447,176...450,829
Ensembl chr 8:447,180...450,538 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:20149623 RGD:2325014 NCBI chr17:40,470,970...40,524,862
Ensembl chr17:40,471,009...40,524,860 		JBrowse link
G STAP1 signal transducing adaptor family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:65,318,861...65,372,838
Ensembl chr 8:65,332,522...65,392,965 		JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:20665543 RGD:4145535 NCBI chr15:48,377,597...48,385,398
Ensembl chr15:48,377,521...48,385,462 		JBrowse link
G STAT1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO (PMID:21606371) MGI PMID:21606371 NCBI chr15:95,593,201...95,646,324
Ensembl chr15:95,593,211...95,646,260 		JBrowse link
G TBXA2R thromboxane A2 receptor ISO RGD PMID:10513923 RGD:11059603 NCBI chr 2:75,068,413...75,081,305
Ensembl chr 2:75,068,698...75,087,731 		JBrowse link
G TFPI tissue factor pathway inhibitor ISO RGD PMID:11816723 RGD:727341 NCBI chr15:92,345,083...92,409,962
Ensembl chr15:92,345,075...92,409,905 		JBrowse link
G THPO thrombopoietin ISO RGD PMID:20236022 RGD:11073693 NCBI chr13:122,259,654...122,267,860
Ensembl chr13:122,260,215...122,267,860 		JBrowse link
G TICAM1 TIR domain containing adaptor molecule 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:74,004,566...74,021,100
Ensembl chr 2:74,004,308...74,021,873 		JBrowse link
G TICAM2 toll like receptor adaptor molecule 2 involved_in ISO (PMID:19412184)
(PMID:22685567)		 UniProt PMID:19412184 PMID:22685567 NCBI chr 2:119,758,622...119,778,650 JBrowse link
G TLR4 toll like receptor 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10880523)
(PMID:10880523), (PMID:24740015)
(PMID:14691481)		 RGD
MGI
Ensembl		 PMID:10880523 PMID:14691481 PMID:20438866 PMID:24740015 GO_REF:0000107 RGD:7777075 NCBI chr 1:258,044,610...258,054,641
Ensembl chr 1:258,044,610...258,058,970 		JBrowse link
G TLR5 toll like receptor 5 ISO RGD PMID:21308757 RGD:5129495 NCBI chr10:19,387,666...19,410,024
Ensembl chr10:19,387,666...19,410,024 		JBrowse link
G TLR9 toll like receptor 9 ISO RGD PMID:20655116 PMID:21308757 RGD:5129495 RGD:5130179 NCBI chr13:34,353,444...34,370,990
Ensembl chr13:34,349,609...34,357,673 		JBrowse link
G TNF tumor necrosis factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19047410), (PMID:20060382), (PMID:21606371) RGD
MGI
Ensembl		 PMID:10959811 PMID:15602748 PMID:17964727 PMID:19047410 PMID:20060382 More... GO_REF:0000107 RGD:14994703 RGD:14995441 RGD:1582142 NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,628...23,702,416 		JBrowse link
G TNFAIP3 TNF alpha induced protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:26,474,158...26,489,771
Ensembl chr 1:26,473,938...26,489,822 		JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:72,195,420...72,231,146
Ensembl chr 6:72,195,435...72,231,147 		JBrowse link
G TNFSF4 TNF superfamily member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:115,535,185...115,857,457
Ensembl chr 9:115,550,569...115,659,263 		JBrowse link
G TNIP1 TNFAIP3 interacting protein 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:71,926,038...71,979,969
Ensembl chr16:71,926,133...71,979,966 		JBrowse link
G TNIP2 TNFAIP3 interacting protein 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:1,530,534...1,554,677
Ensembl chr 8:1,533,429...1,554,683 		JBrowse link
G TNIP3 TNFAIP3 interacting protein 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:102,892,427...102,990,902
Ensembl chr 8:102,892,366...102,991,848 		JBrowse link
G TRAF6 TNF receptor associated factor 6 acts_upstream_of_or_within ISO (PMID:23776175) MGI PMID:23776175 NCBI chr 2:24,602,749...24,628,263
Ensembl chr 2:24,602,804...24,626,072 		JBrowse link
G TREM1 triggering receptor expressed on myeloid cells 1 ISO RGD PMID:26383906 RGD:127284850 NCBI chr 7:36,510,253...36,531,796
Ensembl chr 7:36,510,253...36,531,796 		JBrowse link
G TRIM41 tripartite motif containing 41 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:57,285,401...57,295,771
Ensembl chr 2:57,285,406...57,295,771 		JBrowse link
G TSPO translocator protein ISO RGD PMID:14678758 RGD:2317158 NCBI chr 5:5,723,190...5,735,097
Ensembl chr 5:5,723,190...5,735,131 		JBrowse link
G VIM vimentin involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:43,516,441...43,526,172
Ensembl chr10:43,517,307...43,526,170 		JBrowse link
G VLDLR very low density lipoprotein receptor ISO RGD PMID:16376325 RGD:1625574 NCBI chr 1:219,178,501...219,210,332
Ensembl chr 1:219,173,507...219,210,343 		JBrowse link
G VWF von Willebrand factor ISO RGD PMID:17708840 RGD:11079229 NCBI chr 5:64,516,627...64,655,938
Ensembl chr 5:64,519,186...65,002,452 		JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
G XBP1 X-box binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:46,011,239...46,016,526
Ensembl chr14:46,008,377...46,016,526 		JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:93,541,334...93,551,200
Ensembl chr 6:93,541,334...93,551,193 		JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,063,677...48,066,250 		JBrowse link
lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 acts_upstream_of_or_within ISO (PMID:24740015) MGI PMID:24740015
G BCL10 BCL10 immune signaling adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:130,645,427...130,653,317
Ensembl chr 4:130,645,216...130,657,995 		JBrowse link
G BPI bactericidal permeability increasing protein involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr17:41,344,878...41,392,103
Ensembl chr17:41,344,939...41,392,100 		JBrowse link
G CD14 CD14 molecule involved_in IEA GOC GO_REF:0000108 NCBI chr 2:142,348,036...142,349,686
Ensembl chr 2:142,346,360...142,349,581 		JBrowse link
G CD180 CD180 molecule involved_in
acts_upstream_of		 IEA
ISO		 (PMID:10880523) Ensembl
MGI		 PMID:10880523 GO_REF:0000107 NCBI chr16:45,571,252...45,588,032
Ensembl chr16:45,571,173...45,588,066 		JBrowse link
G CD6 CD6 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:10,739,560...10,785,548
Ensembl chr 2:10,738,471...10,785,516 		JBrowse link
G IRAK1 interleukin 1 receptor associated kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10549626), (PMID:12855817) Ensembl
MGI		 PMID:10549626 PMID:12855817 GO_REF:0000107 NCBI chr  X:124,717,604...124,724,855
Ensembl chr  X:124,717,612...124,724,860 		JBrowse link
G IRAK2 interleukin 1 receptor associated kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15082713) Ensembl
MGI		 PMID:15082713 GO_REF:0000107 NCBI chr13:66,350,606...66,416,834
Ensembl chr13:66,350,606...66,416,827 		JBrowse link
G IRF3 interferon regulatory factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12855817), (PMID:12872135) Ensembl
MGI		 PMID:12855817 PMID:12872135 GO_REF:0000107 NCBI chr 6:54,701,733...54,706,079
Ensembl chr 6:54,701,668...54,707,151 		JBrowse link
G LBP lipopolysaccharide binding protein involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:41,398,935...41,429,467
Ensembl chr17:41,393,818...41,429,551 		JBrowse link
G LY86 lymphocyte antigen 86 acts_upstream_of ISO (PMID:10880523) MGI PMID:10880523 NCBI chr 7:4,108,124...4,156,629
Ensembl chr 7:4,108,118...4,156,625 		JBrowse link
G LY96 lymphocyte antigen 96 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:10880523) Ensembl
GOC
MGI		 PMID:10880523 GO_REF:0000107 GO_REF:0000108 NCBI chr 4:61,919,806...61,950,712
Ensembl chr 4:61,926,064...61,950,697 		JBrowse link
G LYN LYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:75,793,273...75,903,710
Ensembl chr 4:75,793,492...75,903,496 		JBrowse link
G MALT1 MALT1 paracaspase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:162,076,933...162,144,915
Ensembl chr 1:162,076,955...162,144,880 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 acts_upstream_of_or_within ISO (PMID:12872135) MGI PMID:12872135 NCBI chr14:50,083,079...50,165,528
Ensembl chr14:50,082,896...50,165,513 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12872135) Ensembl
MGI		 PMID:12872135 GO_REF:0000107 NCBI chr 7:31,791,398...31,861,544
Ensembl chr 7:31,790,877...31,862,031 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12872135) Ensembl
MGI		 PMID:12872135 GO_REF:0000107 NCBI chr 3:18,291,444...18,299,410
Ensembl chr 3:18,291,445...18,299,567 		JBrowse link
G MTDH metadherin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:39,052,895...39,113,380
Ensembl chr 4:39,051,537...39,113,385 		JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12855817) Ensembl
MGI		 PMID:12855817 GO_REF:0000107 NCBI chr13:22,976,951...22,979,568
Ensembl chr13:22,966,137...22,983,109 		JBrowse link
G NFKBIA NFKB inhibitor alpha involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:12872135), (PMID:18261938) AgBase
MGI		 PMID:12872135 PMID:18261938 GO_REF:0000024 NCBI chr 7:64,508,119...64,510,754
Ensembl chr 7:64,507,822...64,511,277 		JBrowse link
G NOS3 nitric oxide synthase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15647265) Ensembl
MGI		 PMID:15647265 GO_REF:0000107 NCBI chr18:6,209,218...6,228,912
Ensembl chr18:6,209,158...6,228,943 		JBrowse link
G NR2C2 nuclear receptor subfamily 2 group C member 2 acts_upstream_of_or_within ISO (PMID:9851930) MGI PMID:9851930 NCBI chr13:69,464,798...69,577,638
Ensembl chr13:69,464,795...69,576,946 		JBrowse link
G PLCG2 phospholipase C gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:6,433,146...6,603,092
Ensembl chr 6:6,433,153...6,603,060 		JBrowse link
G PRKCE protein kinase C epsilon involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11696589) Ensembl
MGI		 PMID:11696589 GO_REF:0000107 NCBI chr 3:94,351,277...94,864,549
Ensembl chr 3:94,349,889...94,866,306 		JBrowse link
G PTAFR platelet activating factor receptor involved_in IEA GOC GO_REF:0000108 NCBI chr 6:85,235,390...85,272,360
Ensembl chr 6:85,235,394...85,261,760 		JBrowse link
G PTPN22 protein tyrosine phosphatase non-receptor type 22 involved_in ISO (PMID:23991106) UniProt PMID:23991106 NCBI chr 4:106,692,102...106,758,101
Ensembl chr 4:106,686,604...106,758,099 		JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11894098) Ensembl
MGI		 PMID:11894098 GO_REF:0000107 NCBI chr 4:47,026,558...47,075,133
Ensembl chr 4:47,027,098...47,074,704 		JBrowse link
G SCARB1 scavenger receptor class B member 1 involved_in IEA GOC GO_REF:0000108 NCBI chr14:28,301,421...28,393,568
Ensembl chr14:28,301,294...28,393,568 		JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in ISO (MGI:6459415|PMID:30718772) ARUK-UCL PMID:30718772 MGI:6459415 NCBI chr 2:15,227,850...15,245,679
Ensembl chr 2:15,227,881...15,245,677 		JBrowse link
G STAT1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO (PMID:12872135) MGI PMID:12872135 NCBI chr15:95,593,201...95,646,324
Ensembl chr15:95,593,211...95,646,260 		JBrowse link
G TICAM1 TIR domain containing adaptor molecule 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12855817)
(PMID:12872135)		 Ensembl
MGI
TreeGrafter		 PMID:12855817 PMID:12872135 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:74,004,566...74,021,100
Ensembl chr 2:74,004,308...74,021,873 		JBrowse link
G TICAM2 toll like receptor adaptor molecule 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:119,758,622...119,778,650 JBrowse link
G TIFAB TIFA inhibitor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26458771) Ensembl
MGI		 PMID:26458771 GO_REF:0000107 NCBI chr 2:137,675,245...137,678,880
Ensembl chr 2:137,672,407...137,678,612 		JBrowse link
G TLR4 toll like receptor 4 NOT|acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10880523) MGI
GOC
Ensembl		 PMID:10880523 GO_REF:0000107 GO_REF:0000108 NCBI chr 1:258,044,610...258,054,641
Ensembl chr 1:258,044,610...258,058,970 		JBrowse link
G TRAF6 TNF receptor associated factor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:26458771) TreeGrafter
MGI
GO_Central		 PMID:26458771 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:24,602,749...24,628,263
Ensembl chr 2:24,602,804...24,626,072 		JBrowse link
negative regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACTIN cactin, spliceosome C complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:75,049,250...75,065,990
Ensembl chr 2:75,049,261...75,065,299 		JBrowse link
G DEFB114 defensin beta 114 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:43,982,219...43,993,156
Ensembl chr 7:43,982,233...43,993,156 		JBrowse link
G LOC100621695 uncharacterized LOC100621695 involved_in ISO (PMID:33181266) UniProt PMID:33181266 NCBI chr17:35,167,885...35,173,855 JBrowse link
G LTF lactotransferrin involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:29,413,886...29,445,751
Ensembl chr13:29,413,886...29,445,739 		JBrowse link
G NFKBIL1 NFKB inhibitor like 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:23,673,002...23,685,089
Ensembl chr 7:23,669,595...23,685,087 		JBrowse link
G PRDX2 peroxiredoxin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17325201) Ensembl
MGI		 PMID:17325201 GO_REF:0000107 NCBI chr 2:66,207,829...66,211,474
Ensembl chr 2:66,207,828...66,212,009 		JBrowse link
G TRIB1 tribbles pseudokinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:14,289,739...14,298,119
Ensembl chr 4:14,289,751...14,297,663 		JBrowse link
positive regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP6 bone morphogenetic protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:5,058,817...5,208,868
Ensembl chr 7:5,058,817...5,210,270 		JBrowse link
G CD14 CD14 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:142,348,036...142,349,686
Ensembl chr 2:142,346,360...142,349,581 		JBrowse link
G CD180 CD180 molecule acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:10880523) MGI
GO_Central
Ensembl		 PMID:10880523 GO_REF:0000033 GO_REF:0000107 NCBI chr16:45,571,252...45,588,032
Ensembl chr16:45,571,173...45,588,066 		JBrowse link
G LY86 lymphocyte antigen 86 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:10880523) MGI
TreeGrafter
GO_Central		 PMID:10880523 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:4,108,124...4,156,629
Ensembl chr 7:4,108,118...4,156,625 		JBrowse link
G LY96 lymphocyte antigen 96 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:10880523) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:10880523 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:61,919,806...61,950,712
Ensembl chr 4:61,926,064...61,950,697 		JBrowse link
G MIF macrophage migration inhibitory factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,840,303...49,841,063
Ensembl chr14:49,840,305...49,841,068 		JBrowse link
G PRKCA protein kinase C alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:12,882,287...13,268,647
Ensembl chr12:12,882,064...13,263,554 		JBrowse link
G SASH1 SAM and SH3 domain containing 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23776175) MGI
Ensembl		 PMID:23776175 GO_REF:0000107 NCBI chr 1:17,306,364...17,663,117
Ensembl chr 1:17,306,373...17,511,672 		JBrowse link
G SCIMP SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:51,772,635...51,794,107
Ensembl chr12:51,773,448...51,794,104 		JBrowse link
G TRAF6 TNF receptor associated factor 6 involved_in ISO (MGI:1335941|PMID:10215628) UniProt PMID:10215628 MGI:1335941 NCBI chr 2:24,602,749...24,628,263
Ensembl chr 2:24,602,804...24,626,072 		JBrowse link
regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD55 CD55 molecule (Cromer blood group) involved_in ISO (PMID:12731067) UniProt PMID:12731067 NCBI chr 9:67,933,069...67,960,380 JBrowse link
G CD84 CD84 molecule involved_in ISO (MGI:5700297|PMID:20628063) UniProt PMID:20628063 MGI:5700297 NCBI chr 4:89,932,020...89,980,476
Ensembl chr 4:89,932,229...89,969,665 		JBrowse link
G CX3CL1 C-X3-C motif chemokine ligand 1 involved_in ISO (PMID:10652441) ARUK-UCL PMID:10652441 NCBI chr 6:19,312,351...19,324,439 JBrowse link
G CX3CL1 C-X3-C motif chemokine ligand 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 6:19,316,698...19,323,094 JBrowse link
G LOC733579 tripartite motif protein TRIM5 involved_in ISO (PMID:21512573) UniProt PMID:21512573 NCBI chr 9:4,157,290...4,170,233
Ensembl chr 9:4,157,290...4,170,204 		JBrowse link
G TUT4 terminal uridylyl transferase 4 acts_upstream_of_or_within ISO (PMID:16643855) MGI PMID:16643855 NCBI chr 6:159,655,658...159,794,450
Ensembl chr 6:159,692,797...159,793,758 		JBrowse link
tolerance induction to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOD1 aconitate decarboxylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:49,077,152...49,088,218
Ensembl chr11:49,077,492...49,087,104 		JBrowse link
G TNFAIP3 TNF alpha induced protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:26,474,158...26,489,771
Ensembl chr 1:26,473,938...26,489,822 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17806
    cellular process 16839
      cellular response to stimulus 8630
        cellular response to biotic stimulus 347
          cellular response to molecule of bacterial origin 319
            cellular response to lipopolysaccharide 303
              lipopolysaccharide-mediated signaling pathway + 55
              tolerance induction to lipopolysaccharide 2
Path 2
Term Annotations click to browse term
  biological_process 17806
    response to stimulus 10061
      response to external stimulus 2557
        response to external biotic stimulus 1674
          response to other organism 1670
            response to bacterium 902
              response to molecule of bacterial origin 525
                cellular response to molecule of bacterial origin 319
                  cellular response to lipopolysaccharide 303
                    lipopolysaccharide-mediated signaling pathway + 55
                    tolerance induction to lipopolysaccharide 2
paths to the root