LOC733579 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 9 | 4,157,290 - 4,170,204 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 9 | 4,157,290 - 4,170,233 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 9 | 4,724,246 - 4,737,190 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TRIM5 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 11 | 5,588,635 - 5,685,074 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 5,663,195 - 5,938,619 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 5,684,425 - 5,706,304 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 5,641,364 - 5,662,869 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 11 | 5,641,368 - 5,662,869 | NCBI | | | | | Celera | 11 | 5,803,483 - 5,825,436 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | p15.4 | NCBI | | | | | HuRef | 11 | 5,344,050 - 5,365,972 (-) | NCBI | | HuRef | | | CHM1_1 | 11 | 5,683,377 - 5,705,274 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 5,647,845 - 5,742,931 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Trim5 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 7 | 103,912,593 - 103,937,448 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 103,912,593 - 103,937,301 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 7 | 104,263,386 - 104,288,254 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 104,263,386 - 104,288,094 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 7 | 111,413,000 - 111,436,646 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 7 | 104,137,205 - 104,162,054 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 7 | 104,635,824 - 104,653,489 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | E3 | NCBI | | | | | cM Map | 7 | 55.69 | NCBI | | | | |
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Trim5 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 1 | 168,132,277 - 168,149,263 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 158,720,407 - 158,737,393 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 158,720,410 - 158,814,012 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 166,708,173 - 166,725,110 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 173,888,188 - 173,905,126 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 166,780,756 - 166,797,732 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 169,446,774 - 169,463,760 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 169,446,805 - 169,534,896 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 175,586,814 - 175,603,800 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 162,096,439 - 162,113,409 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 162,190,323 - 162,207,293 (-) | NCBI | | | | | Celera | 1 | 156,710,957 - 156,727,926 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q32 | NCBI | | | | |
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TRIM5 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 9 | 8,083,611 - 8,123,913 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 8,041,285 - 8,081,595 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 5,798,336 - 5,819,876 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 5,479,033 - 5,754,014 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 5,479,033 - 5,500,758 (-) | Ensembl | panpan1.1 | | panPan2 | |
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TRIM5 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 1 | 61,040,908 - 61,067,815 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 61,040,928 - 61,069,356 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666043 | 64,938,737 - 64,966,441 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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