CD40 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 17 | 48,286,029 - 48,298,528 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 17 | 48,286,116 - 48,298,188 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 17 | 53,932,001 - 53,943,003 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CD40 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 20 | 46,118,314 - 46,129,858 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 20 | 46,118,271 - 46,129,863 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 20 | 44,746,953 - 44,758,497 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 20 | 44,180,313 - 44,191,791 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 20 | 41,458,363 - 41,469,842 (+) | NCBI | | Celera | | | Cytogenetic Map | 20 | q13.12 | NCBI | | | | | HuRef | 20 | 41,488,189 - 41,499,674 (+) | NCBI | | HuRef | | | CHM1_1 | 20 | 44,649,540 - 44,661,003 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 20 | 47,854,355 - 47,865,910 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Cd40 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 2 | 164,897,535 - 164,913,574 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 164,897,547 - 164,914,868 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 165,055,614 - 165,071,654 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 165,055,627 - 165,072,948 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 164,881,136 - 164,897,154 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 164,746,841 - 164,762,859 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 170,992,951 - 171,008,953 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | H3 | NCBI | | | | | cM Map | 2 | 85.38 | NCBI | | | | |
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Cd40 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 174,209,113 - 174,224,592 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 153,790,372 - 153,805,279 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 153,790,449 - 153,805,534 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 157,599,278 - 157,613,890 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 166,098,246 - 166,112,858 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 163,842,022 - 163,856,635 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 161,519,789 - 161,534,943 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 161,519,743 - 161,534,704 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 167,704,285 - 167,719,416 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 156,092,602 - 156,107,427 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 155,998,622 - 156,006,374 (+) | NCBI | | | | | Celera | 3 | 152,395,702 - 152,410,527 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q42 | NCBI | | | | |
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Cd40 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955445 | 11,190,603 - 11,202,093 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955445 | 11,191,817 - 11,202,156 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CD40 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 21 | 51,856,711 - 51,870,394 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 20 | 51,851,314 - 51,863,198 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 20 | 42,455,711 - 42,467,139 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 20 | 43,541,619 - 43,552,994 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 20 | 43,541,619 - 43,552,994 (+) | Ensembl | panpan1.1 | | panPan2 | |
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CD40 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 24 | 33,352,992 - 33,383,488 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 24 | 33,372,930 - 33,383,301 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 24 | 32,899,232 - 32,909,488 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 24 | 34,062,814 - 34,092,886 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 24 | 34,082,384 - 34,092,875 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 24 | 33,340,743 - 33,351,000 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 24 | 33,456,512 - 33,466,773 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 24 | 33,995,494 - 34,005,757 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Cd40 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024408640 | 191,483,088 - 191,493,621 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936514 | 6,936,572 - 6,947,280 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936514 | 6,936,915 - 6,947,246 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CD40 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 2 | 17,753,713 - 17,765,134 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 17,753,394 - 17,764,566 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666050 | 66,388,299 - 66,399,227 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Cd40 (Heterocephalus glaber - naked mole-rat) |
|