TREM1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 7 | 36,510,253 - 36,531,796 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 36,510,253 - 36,531,796 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 41,804,122 - 41,825,672 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TREM1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 6 | 41,267,385 - 41,286,682 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 41,267,100 - 41,286,682 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 41,235,123 - 41,254,420 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 6 | 41,351,690 - 41,362,435 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 6 | 41,351,689 - 41,362,435 | NCBI | | | | | Celera | 6 | 42,797,142 - 42,807,885 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | p21.1 | NCBI | | | | | HuRef | 6 | 40,961,518 - 40,972,978 (-) | NCBI | | HuRef | | | CHM1_1 | 6 | 41,246,251 - 41,257,709 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 41,096,688 - 41,115,965 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Trem1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 17 | 48,539,763 - 48,553,955 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 17 | 48,539,796 - 48,553,952 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 17 | 48,232,713 - 48,246,927 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 17 | 48,232,768 - 48,246,924 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 17 | 48,371,922 - 48,386,091 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 17 | 47,698,178 - 47,712,333 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 17 | 51,668,001 - 51,682,161 (+) | NCBI | | Celera | | | Cytogenetic Map | 17 | C | NCBI | | | | | cM Map | 17 | 23.99 | NCBI | | | | |
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Trem1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 9 | 20,259,227 - 20,276,879 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 9 | 12,763,819 - 12,779,285 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 9 | 12,763,819 - 12,779,203 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 9 | 21,277,179 - 21,288,238 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 9 | 26,343,405 - 26,354,464 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 9 | 24,732,622 - 24,743,689 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 9 | 14,727,887 - 14,743,371 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 9 | 14,727,976 - 14,809,447 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 9 | 13,649,246 - 13,664,645 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 9 | 8,175,081 - 8,186,142 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 9 | 8,175,083 - 8,193,441 (-) | NCBI | | | | | Celera | 9 | 10,535,490 - 10,546,547 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | q12 | NCBI | | | | |
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TREM1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 5 | 55,770,728 - 55,782,228 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 6 | 51,639,052 - 51,652,228 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 6 | 40,861,283 - 40,874,446 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 6 | 42,168,992 - 42,182,134 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 6 | 42,163,337 - 42,183,091 (-) | Ensembl | panpan1.1 | | panPan2 | |
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TREM1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 12 | 9,990,678 - 10,000,195 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 12 | 9,990,679 - 10,000,236 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 12 | 10,020,952 - 10,030,132 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 12 | 10,470,281 - 10,479,802 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 12 | 10,470,277 - 10,479,839 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 12 | 10,002,655 - 10,011,845 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 12 | 10,084,374 - 10,093,559 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 12 | 10,179,448 - 10,188,597 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Trem1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404946 | 45,374,752 - 45,385,967 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936476 | 18,574,381 - 18,583,647 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936476 | 18,577,825 - 18,583,675 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TREM1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 17 | 30,873,647 - 30,885,292 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 17 | 30,873,666 - 30,886,967 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666044 | 41,275,669 - 41,288,974 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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