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ONTOLOGY REPORT - ANNOTATIONS


Term:response to molecule of bacterial origin
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Accession:GO:0002237 term browser browse the term
Definition:Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin.
Synonyms:exact_synonym: response to bacteria associated molecule;   response to bacterial associated molecule;   response to bacterium associated molecule



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response to molecule of bacterial origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin acts_upstream_of_or_within ISO (MGI:3611636|PMID:16299293) RGD PMID:16299293 MGI:3611636 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
JBrowse link
G Cd14 CD14 molecule involved_in ISO (MGI:3759338|PMID:15493995) RGD PMID:15493995 MGI:3759338 NCBI chr18:28,335,522...28,337,383
Ensembl chr18:28,335,340...28,337,261
JBrowse link
G Cd24 CD24 molecule involved_in ISS
ISO
PMID:15493995
(MGI:3759338|PMID:15493995)
RGD PMID:15493995 PMID:15493995 MGI:3759338, RGD:8554607 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
JBrowse link
G Cxcl2 C-X-C motif chemokine ligand 2 involved_in ISO (PMID:19912257)
(MGI:4943853|PMID:19912257)
RGD PMID:19912257 MGI:4943853 NCBI chr14:17,181,030...17,183,075
Ensembl chr14:17,181,062...17,183,075
JBrowse link
G Gpr31 G protein-coupled receptor 31 involved_in ISO (MGI:6276753|PMID:30675063) RGD PMID:30675063 MGI:6276753 NCBI chr 1:52,926,953...52,927,912 JBrowse link
G Il10 interleukin 10 involved_in ISS
ISO
GO_REF:0000024
(PMID:17449476)
UniProt
RGD
PMID:17449476 GO_REF:0000024 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G LOC100909797 RT1 class I histocompatibility antigen, AA alpha chain-like acts_upstream_of_or_within ISO (MGI:3611636|PMID:16299293) RGD PMID:16299293 MGI:3611636
G Tap2 transporter 2, ATP binding cassette subfamily B member acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3611636|PMID:16299293)
GO_REF:0000107
RGD
Ensembl
PMID:16299293 GO_REF:0000107 MGI:3611636 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (PMID:19912257)
(MGI:4943853|PMID:19912257)
RGD PMID:19912257 MGI:4943853 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282
JBrowse link
cellular response to bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule acts_upstream_of_or_within ISO MGI:1931790|MGI:3573941 (MGI:3528769|PMID:15690042) RGD PMID:15690042 MGI:3528769 NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Mir19a microRNA 19a involved_in ISO (PMID:22105995) RGD PMID:22105995 NCBI chr15:92,180,912...92,180,993
Ensembl chr15:92,180,912...92,180,993
JBrowse link
G Mir19b1 microRNA 19b-1 involved_in ISO (PMID:22105995) RGD PMID:22105995 NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300
JBrowse link
G Mir19b2 microRNA 19b-2 involved_in ISO (PMID:22105995) RGD PMID:22105995 NCBI chr  X:132,422,072...132,422,167
Ensembl chr  X:132,422,072...132,422,167
JBrowse link
G Tirap TIR domain containing adaptor protein acts_upstream_of_or_within ISO MGI:3573942 (MGI:3528769|PMID:15690042) RGD PMID:15690042 MGI:3528769 NCBI chr 8:33,531,724...33,548,508
Ensembl chr 8:33,531,725...33,547,432
JBrowse link
G Tlr1 toll-like receptor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:43,384,127...43,396,765
Ensembl chr14:43,384,932...43,397,125
JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO MGI:2674036 (MGI:3528769|PMID:15690042) RGD PMID:15690042 MGI:3528769 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
G Tlr6 toll-like receptor 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:43,362,164...43,374,500
Ensembl chr14:43,362,164...43,375,685
JBrowse link
cellular response to diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in ISS
ISO
GO_REF:0000024
(PMID:16880211)
UniProt
RGD
PMID:16880211 GO_REF:0000024 NCBI chr18:28,335,522...28,337,383
Ensembl chr18:28,335,340...28,337,261
JBrowse link
G Cd36 CD36 molecule involved_in ISO
ISS
(PMID:16880211)
GO_REF:0000024
RGD
UniProt
PMID:16880211 GO_REF:0000024 NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Mir105 microRNA 105 involved_in ISO (PMID:19509287) RGD PMID:19509287 NCBI chr  X:150,438,529...150,438,601
Ensembl chr  X:150,438,529...150,438,601
JBrowse link
G RGD1565355 similar to fatty acid translocase/CD36 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:17,424,749...17,465,808
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Tlr2 toll-like receptor 2 involved_in
acts_upstream_of_or_within
ISO (PMID:16880211)
(PMID:19931471)
RGD PMID:16880211 PMID:19931471 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
G Tlr6 toll-like receptor 6 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:19931471)
(PMID:16880211)
RGD PMID:16880211 PMID:19931471 PMID:21873635 RGD:13792537 NCBI chr14:43,362,164...43,374,500
Ensembl chr14:43,362,164...43,375,685
JBrowse link
cellular response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (MGI:4411947|PMID:19752193) RGD PMID:19752193 MGI:4411947 NCBI chr 5:67,678,267...67,801,162
Ensembl chr 5:67,681,297...67,801,170
JBrowse link
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:20300455 RGD:39456124 NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709
JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 IEP RGD PMID:20702406 RGD:11081005 NCBI chr 1:242,664,657...242,723,239
Ensembl chr 1:242,664,657...242,723,238
JBrowse link
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:1856663 (MGI:82358|PMID:8806812) RGD PMID:8806812 MGI:82358 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Acod1 aconitate decarboxylase 1 involved_in ISO (PMID:23609450), (PMID:23610393)
(MGI:5490395|PMID:23610393), (MGI:5490396|PMID:23609450)
RGD PMID:23609450 PMID:23610393 MGI:5490395 MGI:5490396 NCBI chr15:79,871,819...79,881,101
Ensembl chr15:79,871,827...79,880,529
JBrowse link
G Adam9 ADAM metallopeptidase domain 9 involved_in ISO (PMID:22480688) RGD PMID:22480688 NCBI chr16:67,022,538...67,101,647
Ensembl chr16:67,022,655...67,100,917
JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 IEP RGD PMID:22871409 RGD:7207038 NCBI chr 3:10,299,264...10,338,464
Ensembl chr 3:10,300,028...10,346,687
JBrowse link
G Aicda activation-induced cytidine deaminase acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 4:155,774,132...155,783,972
Ensembl chr 4:155,774,132...155,783,972
JBrowse link
G Akap8 A-kinase anchoring protein 8 involved_in ISO (MGI:5763364|PMID:19531803) RGD PMID:19531803 MGI:5763364 NCBI chr 7:11,316,224...11,332,523
Ensembl chr 7:11,316,228...11,332,399
JBrowse link
G Ankrd1 ankyrin repeat domain 1 involved_in ISO (PMID:7730328)
(MGI:5294542|PMID:17239933)
RGD PMID:7730328 PMID:17239933 MGI:5294542 NCBI chr 1:233,815,851...233,834,891
Ensembl chr 1:233,815,851...233,834,919
JBrowse link
G Arg1 arginase 1 IEP RGD PMID:9013624 RGD:4144055 NCBI chr 1:20,475,878...20,488,422
Ensembl chr 1:20,475,968...20,488,422
JBrowse link
G Arg2 arginase 2 IEP RGD PMID:11250887 RGD:4144048 NCBI chr 6:97,936,002...97,961,379
Ensembl chr 6:97,936,002...97,961,378
JBrowse link
G Arid5a AT-rich interaction domain 5A involved_in ISO (MGI:5887181|PMID:27671645) RGD PMID:27671645 MGI:5887181 NCBI chr 9:38,534,612...38,549,467
Ensembl chr 9:38,534,590...38,547,597
JBrowse link
G Ass1 argininosuccinate synthase 1 IEP alveolar macrophages RGD PMID:9879717 RGD:4139906 NCBI chr 3:14,747,355...14,796,909
Ensembl chr 3:14,747,368...14,796,903
JBrowse link
G Axl Axl receptor tyrosine kinase involved_in ISO (PMID:19657094) RGD PMID:19657094 NCBI chr 1:81,265,656...81,296,278
Ensembl chr 1:81,265,088...81,296,265
JBrowse link
G B2m beta-2 microglobulin involved_in ISO (PMID:23144825) RGD PMID:23144825 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
JBrowse link
G Bcl10 BCL10, immune signaling adaptor involved_in ISS
ISO
GO_REF:0000024
(PMID:16831874)
UniProt
RGD
PMID:16831874 GO_REF:0000024 NCBI chr 2:234,840,880...234,850,520
Ensembl chr 2:234,840,858...234,850,523
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:2154396 (MGI:71493|PMID:7889565) RGD PMID:7889565 MGI:71493 NCBI chr20:13,471,679...13,596,497
Ensembl chr20:13,471,668...13,597,016
JBrowse link
G Bpi bactericidal/permeability-increasing protein involved_in ISO (PMID:1937776) RGD PMID:1937776 NCBI chr 3:146,909,626...146,936,487
Ensembl chr 3:146,909,629...146,936,221
JBrowse link
G Bysl bystin-like IEP RGD PMID:15305856 RGD:2316201 NCBI chr 9:13,382,806...13,392,557
Ensembl chr 9:13,382,557...13,394,339
JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:20829348) RGD PMID:20829348 NCBI chr 7:8,391,396...8,397,219
Ensembl chr 7:8,391,397...8,396,829
JBrowse link
G Camp cathelicidin antimicrobial peptide IEP RGD PMID:19879657 RGD:2316237 NCBI chr 8:109,841,729...109,843,543
Ensembl chr 8:109,841,729...109,843,543
JBrowse link
G Capn2 calpain 2 IEP RGD PMID:23390485 RGD:13792657 NCBI chr13:94,150,244...94,200,969
Ensembl chr13:94,150,240...94,200,969
JBrowse link
G Casp1 caspase 1 involved_in ISO (PMID:11536016) RGD PMID:11536016 NCBI chr 8:2,587,812...2,597,403
Ensembl chr 8:2,587,831...2,597,383
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 involved_in IEP
ISO
(MGI:3699670|PMID:14662900) RGD PMID:14662900 PMID:8921263 MGI:3699670, RGD:8549522 NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
JBrowse link
G Ccl20 C-C motif chemokine ligand 20 IEP RGD PMID:15618187 RGD:7483631 NCBI chr 9:84,389,031...84,391,629
Ensembl chr 9:84,388,904...84,391,629
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 IEP RGD PMID:20578038 RGD:4889899 NCBI chr10:68,322,826...68,327,365
Ensembl chr10:68,322,829...68,327,377
JBrowse link
G Ccr5 C-C motif chemokine receptor 5 involved_in ISO (PMID:10679098) RGD PMID:10679098 NCBI chr 8:123,752,423...123,757,538
Ensembl chr 8:123,752,325...123,759,260
JBrowse link
G Cd14 CD14 molecule acts_upstream_of_or_within
involved_in
IEP
ISO
ISS
(PMID:12594207)
(PMID:8612135)
(MGI:5645195|PMID:24380872), (MGI:80217|PMID:8612135)
GO_REF:0000024
RGD
UniProt
PMID:8612135 PMID:12594207 PMID:24380872 PMID:22511970 GO_REF:0000024 MGI:5645195 MGI:80217, RGD:7183752 NCBI chr18:28,335,522...28,337,383
Ensembl chr18:28,335,340...28,337,261
JBrowse link
G Cd180 CD180 molecule involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3581654 (MGI:1860539|PMID:10880523)
RGD PMID:10880523 PMID:21873635 MGI:1860539, RGD:13792537 NCBI chr 2:33,855,940...33,870,046
Ensembl chr 2:33,855,991...33,899,936
JBrowse link
G Cd274 CD274 molecule involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:227,116,627...227,137,379
Ensembl chr 1:227,116,649...227,134,450
JBrowse link
G Cd300lb CD300 molecule-like family member b acts_upstream_of_or_within ISO MGI:4829592 (MGI:5446972|PMID:22772446) RGD PMID:22772446 MGI:5446972 NCBI chr10:99,964,801...99,974,790
Ensembl chr10:99,964,801...99,974,790
JBrowse link
G Cd36 CD36 molecule acts_upstream_of_or_within ISO MGI:2447190 (MGI:3587138|PMID:16061696) RGD PMID:16061696 MGI:3587138 NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Cd40 CD40 molecule IEP RGD PMID:19271152 RGD:5491178 NCBI chr 3:153,790,372...153,805,279
Ensembl chr 3:153,790,449...153,805,534
JBrowse link
G Cd68 Cd68 molecule involved_in ISO (MGI:6274946|PMID:16157452) RGD PMID:16157452 MGI:6274946 NCBI chr10:54,381,814...54,383,693
Ensembl chr10:54,381,815...54,383,697
JBrowse link
G Cd80 Cd80 molecule involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3828894|PMID:19047410)
RGD PMID:19047410 PMID:21873635 MGI:3828894, RGD:13792537 NCBI chr11:62,254,543...62,293,414
Ensembl chr11:62,254,624...62,292,030
JBrowse link
G Cd86 CD86 molecule acts_upstream_of_or_within
involved_in
IEP
ISO
IBA
(MGI:3828894|PMID:19047410)
PMID:21873635
RGD PMID:19047410 PMID:21039614 PMID:21873635 MGI:3828894, RGD:4892198, RGD:13792537 NCBI chr11:64,142,193...64,200,816
Ensembl chr11:64,163,828...64,200,818
JBrowse link
G Cdc73 cell division cycle 73 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5319608|PMID:17911113)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17911113 GO_REF:0000024 GO_REF:0000107 MGI:5319608 NCBI chr13:55,357,226...55,449,690
Ensembl chr13:55,357,226...55,449,656
JBrowse link
G Cdk19 cyclin-dependent kinase 19 IEP RGD PMID:20066559 RGD:9590278 NCBI chr20:43,770,409...43,910,629
Ensembl chr20:43,770,409...43,910,628
JBrowse link
G Cdk4 cyclin-dependent kinase 4 acts_upstream_of_or_within ISO (MGI:78049|PMID:8543804) RGD PMID:8543804 MGI:78049 NCBI chr 7:62,885,647...62,889,562
Ensembl chr 7:62,883,105...62,942,403
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta IDA RGD PMID:18405661 RGD:10401220 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
JBrowse link
G Cebpe CCAAT/enhancer binding protein epsilon IEP RGD PMID:9593684 RGD:728287 NCBI chr15:28,169,885...28,171,283
Ensembl chr15:28,169,704...28,171,814
JBrowse link
G Cfh complement factor H acts_upstream_of_or_within IEP
ISO
(MGI:4421084|PMID:19828624) RGD PMID:19828624 PMID:12121434 MGI:4421084, RGD:632369 NCBI chr13:51,512,376...51,613,829
Ensembl chr13:51,511,828...51,613,838
JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO
ISS
(PMID:27812135)
GO_REF:0000024
RGD
UniProt
PMID:27812135 GO_REF:0000024 NCBI chr 5:56,081,385...56,098,529
Ensembl chr 5:56,081,343...56,098,529
JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 acts_upstream_of_or_within ISO (MGI:73245|PMID:7751651) RGD PMID:7751651 MGI:73245 NCBI chr 6:43,073,706...43,085,183
Ensembl chr 6:43,073,796...43,085,183
JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 IEP RGD PMID:21620800 RGD:9685153 NCBI chr 1:135,300,048...135,407,688
Ensembl chr 1:135,300,461...135,409,760
JBrowse link
G Cr2 complement C3d receptor 2 acts_upstream_of_or_within ISO (MGI:4421084|PMID:19828624) RGD PMID:19828624 MGI:4421084 NCBI chr13:106,678,579...106,716,595
Ensembl chr13:106,685,413...106,716,235
JBrowse link
G Csf2 colony stimulating factor 2 IEP RGD PMID:18387647 RGD:5131517 NCBI chr10:38,386,945...38,388,926
Ensembl chr10:38,386,945...38,389,199
JBrowse link
G Csf3 colony stimulating factor 3 IEP RGD PMID:19732808 RGD:5133735 NCBI chr10:83,660,787...83,664,569
Ensembl chr10:83,661,207...83,663,603
JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in ISO (MGI:5319608|PMID:17911113) RGD PMID:17911113 MGI:5319608 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303
JBrowse link
G Ctsg cathepsin G involved_in ISO (PMID:1937776) RGD PMID:1937776 NCBI chr15:29,930,988...29,937,353
Ensembl chr15:29,931,003...29,937,353
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in IEP
ISO
UniProtKB:P05067 (MGI:6162390|PMID:23499256) RGD PMID:23499256 PMID:10422773 MGI:6162390, RGD:4892028 NCBI chr 8:119,785,726...119,799,431
Ensembl chr 8:119,782,595...119,800,014
JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:17,193,364...17,195,143
Ensembl chr14:17,193,365...17,195,215
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:23776175)
RGD PMID:23776175 PMID:21873635 RGD:13792537 NCBI chr14:15,704,772...15,706,969
Ensembl chr14:15,704,758...15,706,975
JBrowse link
G Cxcl11 C-X-C motif chemokine ligand 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:15,689,432...15,692,207
Ensembl chr14:15,689,424...15,692,271
JBrowse link
G Cxcl13 C-X-C motif chemokine ligand 13 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:13,608,894...13,613,965
Ensembl chr14:13,608,902...13,613,933
JBrowse link
G Cxcl16 C-X-C motif chemokine ligand 16 involved_in ISO (MGI:1891794|PMID:11017100) RGD PMID:11017100 MGI:1891794 NCBI chr10:55,166,721...55,171,316
Ensembl chr10:55,166,723...55,171,592
JBrowse link
G Cxcl2 C-X-C motif chemokine ligand 2 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:16239643 PMID:21873635 RGD:5135237, RGD:13792537 NCBI chr14:17,181,030...17,183,075
Ensembl chr14:17,181,062...17,183,075
JBrowse link
G Cxcl3 C-X-C motif chemokine ligand 3 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:10738946 PMID:21873635 RGD:5135239, RGD:13792537 NCBI chr14:17,270,146...17,289,458
Ensembl chr14:17,270,146...17,289,511
JBrowse link
G Cxcl6 C-X-C motif chemokine ligand 6 involved_in IEP
IBA
ISO
IEA
PMID:21873635
(PMID:8399143)
GO_REF:0000107
RGD
Ensembl
PMID:8399143 PMID:15778492 PMID:21873635 GO_REF:0000107, RGD:5135262, RGD:13792537 NCBI chr14:17,310,089...17,312,303
Ensembl chr14:17,310,426...17,313,093
JBrowse link
G Cxcl9 C-X-C motif chemokine ligand 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:15,722,868...15,727,779
Ensembl chr14:15,722,908...15,728,435
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:20665543 RGD:4145535 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 IEP RGD PMID:20665543 RGD:4145535 NCBI chr 1:245,535,462...245,543,148
Ensembl chr 1:245,535,462...245,541,573
JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISS
ISO
GO_REF:0000024
(MGI:4453088|PMID:19948740)
(PMID:19948740)
UniProt
RGD
PMID:19948740 GO_REF:0000024 MGI:4453088 NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280
JBrowse link
G Defa10 defensin alpha 10 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:94880|MGI:94882|MGI:99582 (MGI:3698376|PMID:11248802)
RGD PMID:11248802 PMID:21873635 MGI:3698376, RGD:13792537 NCBI chr16:70,514,248...70,515,024
Ensembl chr16:70,514,248...70,515,024
JBrowse link
G Defa11 defensin alpha 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,533,436...70,535,646
Ensembl chr16:70,533,436...70,535,604
JBrowse link
G Defa24 defensin alpha 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,349,550...70,350,582
Ensembl chr16:70,349,567...70,350,603
JBrowse link
G Defa5 defensin alpha 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,342,530...70,344,836
Ensembl chr16:70,342,530...70,344,836
JBrowse link
G Defa6 defensin alpha 6 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:94880|MGI:94882|MGI:94883 (MGI:3698376|PMID:11248802)
PMID:21873635
RGD PMID:11248802 PMID:21873635 MGI:3698376, RGD:13792537 NCBI chr16:70,405,268...70,406,142
Ensembl chr16:70,405,268...70,406,142
JBrowse link
G Defa8 defensin alpha 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,433,166...70,434,059
Ensembl chr16:70,433,166...70,434,059
JBrowse link
G Defa9 defensin alpha 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,481,813...70,482,803
Ensembl chr16:70,481,821...70,482,717
JBrowse link
G Defal1 defensin alpha-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,371,518...70,372,353
Ensembl chr16:70,371,518...70,372,353
JBrowse link
G Ednrb endothelin receptor type B IEP RGD PMID:18091567 RGD:4892289 NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115
JBrowse link
G Efnb2 ephrin B2 IEP RGD PMID:33794069 RGD:127285659 NCBI chr16:80,783,389...80,827,420
Ensembl chr16:80,783,417...80,824,391
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IEP RGD PMID:23990338 RGD:9685490 NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317
JBrowse link
G Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 IEP RGD PMID:23990338 RGD:9685490 NCBI chr 3:8,213,575...8,219,094
Ensembl chr 3:8,213,663...8,226,866
JBrowse link
G Epas1 endothelial PAS domain protein 1 IEP RGD PMID:12099714 RGD:11041576 NCBI chr 6:7,790,236...7,871,246
Ensembl chr 6:7,790,647...7,871,228
JBrowse link
G Ephb2 Eph receptor B2 IEP RGD PMID:33794069 RGD:127285659 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Fcar Fc alpha receptor involved_in ISO (PMID:25339672) RGD PMID:25339672 NCBI chr 1:69,626,458...69,660,558 JBrowse link
G Fcgr2b Fc gamma receptor 2B IEP RGD PMID:19106808 RGD:5147925 NCBI chr13:83,191,253...83,207,776
Ensembl chr13:83,193,163...83,207,778
JBrowse link
G Fcgr3a Fc gamma receptor 3A IDA RGD PMID:19106808 RGD:5147925 NCBI chr13:83,249,905...83,259,921
Ensembl chr13:83,249,872...83,259,921
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 IEP RGD PMID:30250515 RGD:25330356 NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350
JBrowse link
G Fn1 fibronectin 1 IEP RGD PMID:11819312 RGD:7205475 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
JBrowse link
G Fubp1 far upstream element binding protein 1 IEP RGD PMID:23797733 RGD:13673879 NCBI chr 2:241,159,481...241,186,591
Ensembl chr 2:241,159,512...241,186,602
JBrowse link
G Gata1 GATA binding protein 1 IDA RGD PMID:17687519 RGD:5131526 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530
JBrowse link
G Gbp2 guanylate binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:4412460|PMID:18025219)
Ensembl
RGD
PMID:18025219 GO_REF:0000107 MGI:4412460 NCBI chr 2:231,332,488...231,348,573
Ensembl chr 2:231,332,284...231,348,571
JBrowse link
G Gfer growth factor, augmenter of liver regeneration IEP RGD PMID:23073658 RGD:9685733 NCBI chr10:13,718,489...13,721,782
Ensembl chr10:13,718,489...13,720,869
JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor involved_in
acts_upstream_of_or_within
ISO (PMID:20547752) RGD PMID:20547752 NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814
JBrowse link
G Ghsr growth hormone secretagogue receptor IEP RGD PMID:15155262 RGD:12905047 NCBI chr 2:110,268,489...110,271,865
Ensembl chr 2:110,268,489...110,271,865
JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:6478067|PMID:32460388)
UniProt
RGD
PMID:32460388 GO_REF:0000024 MGI:6478067 NCBI chr10:62,342,082...62,356,379
Ensembl chr10:62,342,299...62,356,373
JBrowse link
G Grk6 G protein-coupled receptor kinase 6 IEP RGD PMID:23359120 RGD:13792782 NCBI chr17:9,177,018...9,192,644
Ensembl chr17:9,177,019...9,192,644
JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5009411|PMID:16023107)
BHF-UCL
RGD
PMID:16023107 GO_REF:0000024 MGI:5009411 NCBI chr 1:201,337,762...201,340,230
Ensembl chr 1:201,321,672...201,340,226
JBrowse link
G Hadhb hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta involved_in ISO
IEA
(MGI:6437701|PMID:32513690)
GO_REF:0000107
RGD
Ensembl
PMID:32513690 GO_REF:0000107 MGI:6437701 NCBI chr 6:26,153,572...26,187,668
Ensembl chr 6:26,153,578...26,184,869
JBrowse link
G Hamp hepcidin antimicrobial peptide IEP RGD PMID:23506423 RGD:11041627 NCBI chr 1:86,170,926...86,172,865
Ensembl chr 1:86,170,901...86,172,891
JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5705210|PMID:25337993) RGD PMID:25337993 MGI:5705210 NCBI chr10:30,882,484...30,914,018
Ensembl chr10:30,882,606...30,909,137
JBrowse link
G Hdac5 histone deacetylase 5 IEP RGD PMID:22933299 RGD:9590257 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:19940979 RGD:5147884 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:6244743|PMID:28096568) RGD PMID:28096568 MGI:6244743 NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO (PMID:19811285) RGD PMID:19811285 NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP RGD PMID:11578593 RGD:1599044 NCBI chr 2:185,875,609...185,903,505
Ensembl chr 2:185,875,616...185,902,130
JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M IEP RGD PMID:14597422 RGD:10054261 NCBI chr 7:14,438,703...14,476,781
Ensembl chr 7:14,438,688...14,476,762
JBrowse link
G Hsf1 heat shock transcription factor 1 IEP RGD PMID:21540803 RGD:10402943 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP RGD PMID:20674665 RGD:4145373 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (MGI:3821815|PMID:18791161) RGD PMID:18791161 MGI:3821815 NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
JBrowse link
G Il10 interleukin 10 involved_in
acts_upstream_of_or_within
ISO (PMID:23071313)
(MGI:3828894|PMID:19047410), (MGI:5013871|PMID:21609717)
RGD PMID:19047410 PMID:21609717 PMID:23071313 MGI:3828894 MGI:5013871 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G Il12a interleukin 12A acts_upstream_of_or_within ISO (MGI:3828894|PMID:19047410) RGD PMID:19047410 MGI:3828894 NCBI chr 2:152,965,769...152,973,035
Ensembl chr 2:152,965,769...152,972,734
JBrowse link
G Il12b interleukin 12B acts_upstream_of_or_within ISO (MGI:4412460|PMID:18025219), (MGI:5013875|PMID:21606371) RGD PMID:18025219 PMID:21606371 MGI:4412460 MGI:5013875 NCBI chr10:28,888,832...28,903,796
Ensembl chr10:28,893,008...28,902,903
JBrowse link
G Il18 interleukin 18 IEP RGD PMID:11739527 RGD:729357 NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
JBrowse link
G Il1a interleukin 1 alpha involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:116,526,601...116,537,055
Ensembl chr 3:116,526,604...116,536,822
JBrowse link
G Il1b interleukin 1 beta involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:23200736 PMID:21873635 RGD:7175528, RGD:13792537 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Il1f10 interleukin 1 family member 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:7,072,511...7,075,439
Ensembl chr 3:7,072,511...7,075,439
JBrowse link
G Il24 interleukin 24 IEP RGD PMID:12182458 RGD:5147432 NCBI chr13:42,353,089...42,358,487
Ensembl chr13:42,353,090...42,358,487
JBrowse link
G Il36a interleukin 36, alpha involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:6,996,851...7,001,400
Ensembl chr 3:6,996,851...7,001,400
JBrowse link
G Il36b interleukin 36, beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:7,024,862...7,122,489
Ensembl chr 3:7,021,973...7,031,619
JBrowse link
G Il36g interleukin 36, gamma involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:6,948,323...6,954,485
Ensembl chr 3:6,948,297...6,954,480
JBrowse link
G Il36rn interleukin 36 receptor antagonist involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:7,044,419...7,051,016
Ensembl chr 3:7,044,406...7,051,016
JBrowse link
G Il6 interleukin 6 acts_upstream_of_or_within IEP
ISO
(MGI:3828894|PMID:19047410), (MGI:5013875|PMID:21606371)
(PMID:23776175)
(MGI:3828894|PMID:19047410), (MGI:5013875|PMID:21606371), (MGI:5543352|PMID:23610142)
RGD PMID:19047410 PMID:21606371 PMID:23610142 PMID:23776175 PMID:2789217 MGI:3828894 MGI:5013875 MGI:5543352, RGD:11049548 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 IEP RGD PMID:15793310 RGD:1579809 NCBI chr  X:151,768,621...151,778,521
Ensembl chr  X:151,768,777...151,778,521
JBrowse link
G Irf3 interferon regulatory factor 3 acts_upstream_of_or_within ISO (MGI:5013875|PMID:21606371) RGD PMID:21606371 MGI:5013875 NCBI chr 1:95,479,966...95,484,926
Ensembl chr 1:95,479,821...95,484,935
JBrowse link
G Irf8 interferon regulatory factor 8 acts_upstream_of_or_within ISO MGI:1926332 (MGI:3653161|PMID:9348310) RGD PMID:9348310 MGI:3653161 NCBI chr19:48,790,483...48,812,363
Ensembl chr19:48,790,588...48,811,829
JBrowse link
G Irgm immunity-related GTPase M involved_in ISO (PMID:25891078) RGD PMID:25891078 NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
JBrowse link
G Jak2 Janus kinase 2 acts_upstream_of_or_within ISO (MGI:5013875|PMID:21606371) RGD PMID:21606371 MGI:5013875 NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:25110868) RGD PMID:25110868 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G Klrk1 killer cell lectin like receptor K1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3028810|PMID:14764662)
GO_REF:0000107
RGD
Ensembl
PMID:14764662 GO_REF:0000107 MGI:3028810 NCBI chr 4:163,079,887...163,092,434
Ensembl chr 4:163,081,927...163,092,459
JBrowse link
G Kmo kynurenine 3-monooxygenase IEP RGD PMID:26524415 RGD:13703043 NCBI chr13:87,557,080...87,589,334
Ensembl chr13:87,557,286...87,588,881
JBrowse link
G Lbp lipopolysaccharide binding protein involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:12594207)
(PMID:24120359)
(MGI:5645195|PMID:24380872)
UniProt
RGD
PMID:12594207 PMID:24120359 PMID:24380872 GO_REF:0000024 MGI:5645195 NCBI chr 3:146,953,889...146,981,032
Ensembl chr 3:146,954,015...146,981,586
JBrowse link
G Lcn2 lipocalin 2 IEP RGD PMID:19329498 RGD:2316495 NCBI chr 3:15,680,688...15,684,033
Ensembl chr 3:15,680,687...15,684,095
JBrowse link
G Ldoc1 LDOC1, regulator of NFKB signaling involved_in ISO (PMID:27812135) RGD PMID:27812135 NCBI chr  X:139,965,511...140,074,355
Ensembl chr  X:139,965,509...140,074,355
JBrowse link
G Lilrb2 leukocyte immunoglobulin like receptor B2 involved_in ISO (PMID:14971032) RGD PMID:14971032 NCBI chr 1:65,326,832...65,334,683
Ensembl chr 1:65,326,832...65,334,679
JBrowse link
G Litaf lipopolysaccharide-induced TNF factor acts_upstream_of_or_within ISO MGI:3687962 (MGI:3687609|PMID:16954198) RGD PMID:16954198 MGI:3687609 NCBI chr10:4,656,308...4,692,981
Ensembl chr10:4,625,552...4,692,763
JBrowse link
G Ltc4s leukotriene C4 synthase IEP RGD PMID:9794912 RGD:2316634 NCBI chr10:34,560,476...34,562,790
Ensembl chr10:34,560,360...34,562,651
JBrowse link
G Ly96 lymphocyte antigen 96 involved_in ISO (MGI:5645195|PMID:24380872) RGD PMID:24380872 MGI:5645195 NCBI chr 5:2,582,233...2,612,357
Ensembl chr 5:2,582,254...2,612,386
JBrowse link
G Malt1 MALT1 paracaspase acts_upstream_of_or_within ISO (PMID:16831874) RGD PMID:16831874 NCBI chr18:58,942,282...58,996,318
Ensembl chr18:58,942,299...58,994,260
JBrowse link
G Map2k3 mitogen activated protein kinase kinase 3 IDA RGD PMID:14670949 RGD:7495812 NCBI chr10:45,608,145...45,629,492
Ensembl chr10:45,607,163...45,629,492
JBrowse link
G Map2k7 mitogen activated protein kinase kinase 7 involved_in ISO (MGI:1101248|PMID:9405446) RGD PMID:9405446 MGI:1101248 NCBI chr12:2,591,312...2,604,211
Ensembl chr12:2,591,219...2,604,222
JBrowse link
G Mapk14 mitogen activated protein kinase 14 acts_upstream_of_or_within ISO (PMID:23776175) RGD PMID:23776175 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 acts_upstream_of_or_within ISO (PMID:23776175) RGD PMID:23776175 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 IEP RGD PMID:9475517 RGD:2304245 NCBI chr10:34,169,661...34,211,138
Ensembl chr10:34,169,675...34,210,178
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO
GO_REF:0000024
(MGI:3829850|PMID:18955699)
UniProt
RGD
PMID:18955699 GO_REF:0000024 MGI:3829850 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Mir107 microRNA 107 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 1:232,337,767...232,337,853
Ensembl chr 1:232,337,767...232,337,853
JBrowse link
G Mir10a microRNA 10a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr10:81,283,171...81,283,280
Ensembl chr10:81,283,171...81,283,280
JBrowse link
G Mir125a microRNA 125a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710
JBrowse link
G Mir128-1 microRNA 128-1 involved_in ISO (PMID:24415783) RGD PMID:24415783 NCBI chr13:39,699,449...39,699,530
Ensembl chr13:39,699,449...39,699,530
JBrowse link
G Mir128-2 microRNA 128-2 involved_in ISO (PMID:24415783) RGD PMID:24415783 NCBI chr 8:112,085,467...112,085,550
Ensembl chr 8:112,085,467...112,085,550
JBrowse link
G Mir139 microRNA 139 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 1:155,878,828...155,878,895
Ensembl chr 1:155,878,825...155,878,902
JBrowse link
G Mir140 microRNA 140 acts_upstream_of_or_within
involved_in
ISO (MGI:3817382|PMID:18762567)
(PMID:30321456)
RGD PMID:18762567 PMID:30321456 MGI:3817382 NCBI chr19:35,465,577...35,465,675
Ensembl chr19:35,465,577...35,465,675
JBrowse link
G Mir142 microRNA 142 acts_upstream_of_or_within ISO (MGI:5013506|PMID:21536037) RGD PMID:21536037 MGI:5013506 NCBI chr10:72,557,864...72,557,950
Ensembl chr10:72,557,857...72,557,967
JBrowse link
G Mir146a microRNA 146a acts_upstream_of_or_within
involved_in
ISO (MGI:3821815|PMID:18791161), (MGI:5050043|PMID:21247879)
(PMID:16885212)
RGD PMID:16885212 PMID:18791161 PMID:21247879 MGI:3821815 MGI:5050043 NCBI chr10:27,848,516...27,848,610
Ensembl chr10:27,848,516...27,848,610
JBrowse link
G Mir146b microRNA 146b acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 1:245,203,438...245,203,525
Ensembl chr 1:245,203,438...245,203,525
JBrowse link
G Mir147 microRNA 147 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 3:109,722,692...109,722,770
Ensembl chr 3:109,722,692...109,722,770
JBrowse link
G Mir150 microRNA 150 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) RGD PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr 1:95,605,024...95,605,108
Ensembl chr 1:95,605,024...95,605,108
JBrowse link
G Mir155 microRNA 155 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) RGD PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr11:23,774,654...23,774,718
Ensembl chr11:23,774,654...23,774,718
JBrowse link
G Mir16 microRNA 16 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 2:153,245,349...153,245,443
Ensembl chr 2:153,245,349...153,245,443
JBrowse link
G Mir181a2 microRNA 181a-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 3:22,615,845...22,615,961
Ensembl chr 3:22,615,845...22,615,961
JBrowse link
G Mir181b2 microRNA 181b-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 3:22,616,948...22,617,035
Ensembl chr 3:22,616,948...22,617,035
JBrowse link
G Mir181c microRNA 181c acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) RGD PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr19:23,983,523...23,983,628
Ensembl chr19:23,983,523...23,983,628
JBrowse link
G Mir184 microRNA 184 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 8:90,343,134...90,343,210
Ensembl chr 8:90,343,134...90,343,210
JBrowse link
G Mir187 microRNA 187 involved_in ISO (PMID:23071313) RGD PMID:23071313 NCBI chr18:15,731,194...15,731,297
Ensembl chr18:15,731,194...15,731,297
JBrowse link
G Mir193a microRNA 193a acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr10:64,672,343...64,672,454
Ensembl chr10:64,672,343...64,672,454
JBrowse link
G Mir194-1 microRNA 194-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr13:96,851,166...96,851,248
Ensembl chr13:96,851,166...96,851,248
JBrowse link
G Mir194-2 microRNA 194-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 1:203,564,761...203,564,845
Ensembl chr 1:203,564,761...203,564,845
JBrowse link
G Mir199a2 microRNA 199a-2 acts_upstream_of_or_within ISO MGI:2676863 (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr13:74,582,954...74,583,063
Ensembl chr13:74,582,954...74,583,063
JBrowse link
G Mir200c microRNA 200c acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 4:157,523,679...157,523,747 JBrowse link
G Mir202 microRNA 202 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 1:194,754,730...194,754,801
Ensembl chr 1:194,754,730...194,754,801
JBrowse link
G Mir205 microRNA 205 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr13:105,035,878...105,035,985
Ensembl chr13:105,035,878...105,035,985
JBrowse link
G Mir21 microRNA 21 involved_in IEP
ISO
(PMID:19946272), (PMID:29039542) RGD PMID:19946272 PMID:29039542 PMID:30542412 RGD:41410885 NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
JBrowse link
G Mir210 microRNA 210 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 1:196,326,343...196,326,452
Ensembl chr 1:196,326,337...196,326,454
JBrowse link
G Mir217 microRNA 217 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr14:102,531,505...102,531,609
Ensembl chr14:102,531,505...102,531,609
JBrowse link
G Mir223 microRNA 223 involved_in
acts_upstream_of_or_within
IEP
ISO
(PMID:34637033)
(MGI:3817382|PMID:18762567), (MGI:3821815|PMID:18791161), (MGI:5050043|PMID:21247879)
RGD PMID:18762567 PMID:18791161 PMID:21247879 PMID:34637033 PMID:29707878 MGI:3817382 MGI:3821815 MGI:5050043, RGD:25823197 NCBI chr  X:61,141,887...61,141,996
Ensembl chr  X:61,141,887...61,141,996
JBrowse link
G Mir224 microRNA 224 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) RGD PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr  X:150,065,088...150,065,169
Ensembl chr  X:150,065,088...150,065,169
JBrowse link
G Mir23b microRNA 23b acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr17:1,813,667...1,813,763
Ensembl chr17:1,813,667...1,813,763
JBrowse link
G Mir24-2 microRNA 24-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr19:23,954,683...23,954,790
Ensembl chr19:23,954,683...23,954,790
JBrowse link
G Mir26a microRNA 26a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 8:118,755,289...118,755,378
Ensembl chr 8:118,755,289...118,755,378
JBrowse link
G Mir26b microRNA 26b acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 9:75,976,596...75,976,680
Ensembl chr 9:75,976,596...75,976,680
JBrowse link
G Mir27a microRNA 27a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr19:23,954,831...23,954,917
Ensembl chr19:23,954,831...23,954,917
JBrowse link
G Mir29a microRNA 29a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 4:59,650,608...59,650,695 JBrowse link
G Mir29b1 microRNA 29b-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 4:59,650,987...59,651,067
Ensembl chr 4:59,650,986...59,651,067
JBrowse link
G Mir29b2 microRNA 29b-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr13:106,570,371...106,570,451
Ensembl chr13:106,570,367...106,570,456
JBrowse link
G Mir30b microRNA 30b acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 7:100,132,589...100,132,675
Ensembl chr 7:100,132,589...100,132,675
JBrowse link
G Mir30c1 microRNA 30c-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 5:134,349,237...134,349,325
Ensembl chr 5:134,349,237...134,349,325
JBrowse link
G Mir30c2 microRNA 30c-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 9:25,757,342...25,757,425
Ensembl chr 9:25,757,342...25,757,425
JBrowse link
G Mir30d microRNA 30d acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 7:100,136,391...100,136,472
Ensembl chr 7:100,136,391...100,136,472
JBrowse link
G Mir323 microRNA 323 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:128,725,539...128,725,624
Ensembl chr 6:128,725,539...128,725,624
JBrowse link
G Mir342 microRNA 342 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) RGD PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr 6:127,565,269...127,565,367
Ensembl chr 6:127,565,269...127,565,367
JBrowse link
G Mir345 microRNA 345 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:127,754,027...127,754,122
Ensembl chr 6:127,754,027...127,754,122
JBrowse link
G Mir381 microRNA 381 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:128,740,976...128,741,036 JBrowse link
G Mir383 microRNA 383 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr16:54,040,340...54,040,413
Ensembl chr16:54,040,340...54,040,413
JBrowse link
G Mir409 microRNA 409 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:128,757,780...128,757,856
Ensembl chr 6:128,757,779...128,757,858
JBrowse link
G Mir425 microRNA 425 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 8:109,264,555...109,264,637
Ensembl chr 8:109,264,555...109,264,637
JBrowse link
G Mir431 microRNA 431 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:128,544,210...128,544,323
Ensembl chr 6:128,544,210...128,544,323
JBrowse link
G Mir433 microRNA 433 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:128,545,119...128,545,211
Ensembl chr 6:128,545,112...128,545,217
JBrowse link
G Mir484 microRNA 484 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr10:887,684...887,760
Ensembl chr10:887,684...887,760
JBrowse link
G Mir486 microRNA 486 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382
G Mir494 microRNA 494 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:128,728,710...128,728,792
Ensembl chr 6:128,728,709...128,728,793
JBrowse link
G Mir500 microRNA 500 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr  X:15,258,778...15,258,857
Ensembl chr  X:15,258,768...15,258,859
JBrowse link
G Mir598 microRNA 598 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr15:37,962,692...37,962,770
Ensembl chr15:37,962,692...37,962,771
JBrowse link
G Mir7-1 microRNA 7-1 acts_upstream_of_or_within ISO MGI:3619437 (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr17:6,273,264...6,273,360
Ensembl chr17:6,273,264...6,273,360
JBrowse link
G Mir9 microRNA 9 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 9:1,080,274...1,080,383
Ensembl chr 9:1,080,274...1,080,383
JBrowse link
G Mir98 microRNA 98 acts_upstream_of_or_within ISO (MGI:5013871|PMID:21609717) RGD PMID:21609717 MGI:5013871 NCBI chr  X:20,981,235...20,981,342
Ensembl chr  X:20,981,235...20,981,342
JBrowse link
G Mirlet7g microRNA let-7g acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 8:106,822,293...106,822,380
Ensembl chr 8:106,822,280...106,822,388
JBrowse link
G Mmp1 matrix metallopeptidase 1 IEP RGD PMID:21683124 RGD:7207286 NCBI chr 8:4,658,588...4,679,099
Ensembl chr 8:4,658,588...4,679,097
JBrowse link
G Mmp9 matrix metallopeptidase 9 IEP RGD PMID:21683124 RGD:7207286 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
JBrowse link
G Mrc1 mannose receptor, C type 1 acts_upstream_of_or_within ISO (MGI:5486412|PMID:22832163) RGD PMID:22832163 MGI:5486412 NCBI chr17:77,249,187...77,330,857
Ensembl chr17:77,249,187...77,330,857
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in ISO (MGI:6355543|PMID:17660297) RGD PMID:17660297 MGI:6355543 NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
JBrowse link
G Ncl nucleolin IMP RGD PMID:21309751 RGD:9686449 NCBI chr 9:86,999,588...87,008,112
Ensembl chr 9:86,998,019...87,008,136
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in
acts_upstream_of_or_within
IDA
ISO
(MGI:6451247|PMID:31786261)
(PMID:23776175)
RGD PMID:23776175 PMID:31786261 PMID:16842873 MGI:6451247, RGD:10045666 NCBI chr 2:224,016,214...224,132,135
Ensembl chr 2:224,016,214...224,110,404
JBrowse link
G Nfkbib NFKB inhibitor beta involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:4437182|PMID:20060382)
RGD PMID:20060382 PMID:21873635 MGI:4437182, RGD:13792537 NCBI chr 1:84,046,292...84,053,862
Ensembl chr 1:84,046,295...84,053,862
JBrowse link
G Nfkbil1 NFKB inhibitor like 1 involved_in ISO
ISS
(PMID:20829348)
GO_REF:0000024
RGD
UniProt
PMID:20829348 GO_REF:0000024 NCBI chr20:3,589,974...3,608,348
Ensembl chr20:3,590,642...3,605,616
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 involved_in ISO (PMID:12483741), (PMID:28847925)
(MGI:6095076|PMID:28847925)
RGD PMID:12483741 PMID:28847925 MGI:6095076 NCBI chr10:44,326,770...44,353,814
Ensembl chr10:44,328,566...44,352,811
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in ISO (PMID:27812135) RGD PMID:27812135 NCBI chr19:18,379,720...18,422,817
Ensembl chr19:18,382,439...18,417,177
JBrowse link
G Nos2 nitric oxide synthase 2 acts_upstream_of_or_within
involved_in
IEP
ISO
IEA
(MGI:3821815|PMID:18791161), (MGI:4412460|PMID:18025219)
GO_REF:0000107
RGD
Ensembl
PMID:18025219 PMID:18791161 PMID:21975807 GO_REF:0000107 MGI:3821815 MGI:4412460, RGD:5508737 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210
JBrowse link
G Np4 defensin NP-4 precursor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,494,607...70,497,261
Ensembl chr16:70,342,529...70,497,202
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:18511497)
Ensembl
RGD
PMID:18511497 GO_REF:0000107 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 involved_in ISO
IEA
(PMID:18511497)
GO_REF:0000107
(MGI:5009771|PMID:21187453)
RGD
Ensembl
PMID:18511497 PMID:21187453 GO_REF:0000107 MGI:5009771 NCBI chr 3:77,158,808...77,168,907
Ensembl chr 3:77,158,808...77,168,722
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in ISO
IEA
(MGI:5707586|PMID:18972444)
GO_REF:0000107
RGD
Ensembl
PMID:18972444 GO_REF:0000107 MGI:5707586 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047
JBrowse link
G Nuggc nuclear GTPase, germinal center associated involved_in ISO (PMID:19734146) RGD PMID:19734146 NCBI chr15:39,821,851...39,866,122
Ensembl chr15:39,821,855...39,866,122
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase IMP RGD PMID:19098112 RGD:9590190 NCBI chr  X:66,771,278...66,816,148
Ensembl chr  X:66,771,349...66,816,146
JBrowse link
G Oprk1 opioid receptor, kappa 1 IEP RGD PMID:9645969 RGD:9831421 NCBI chr 5:13,860,016...13,877,823
Ensembl chr 5:13,860,021...13,877,823
JBrowse link
G P2ry2 purinergic receptor P2Y2 IEP RGD PMID:18689605 RGD:2316659 NCBI chr 1:155,352,050...155,367,423
Ensembl chr 1:155,351,165...155,367,632
JBrowse link
G Pabpn1 poly(A) binding protein, nuclear 1 involved_in ISO (MGI:5795816|PMID:22844456) RGD PMID:22844456 MGI:5795816 NCBI chr15:28,368,100...28,372,712
Ensembl chr15:28,368,100...28,372,703
JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in ISS
ISO
GO_REF:0000024
(MGI:5319608|PMID:17911113)
UniProt
RGD
PMID:17911113 GO_REF:0000024 MGI:5319608 NCBI chr 1:83,683,654...83,689,233
Ensembl chr 1:83,668,813...83,689,237
JBrowse link
G Park7 Parkinsonism associated deglycase IEP RGD PMID:23847046 RGD:13462068 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
JBrowse link
G Pdcd1lg2 programmed cell death 1 ligand 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:227,158,941...227,223,938
Ensembl chr 1:227,158,941...227,223,938
JBrowse link
G Pdcd4 programmed cell death 4 involved_in ISO (MGI:4438829|PMID:19946272) RGD PMID:19946272 MGI:4438829 NCBI chr 1:252,921,342...252,944,278
Ensembl chr 1:252,921,392...252,944,275
JBrowse link
G Pde2a phosphodiesterase 2A acts_upstream_of_or_within ISO (PMID:21571906) RGD PMID:21571906 NCBI chr 1:155,823,590...155,915,434
Ensembl chr 1:155,813,180...155,915,434
JBrowse link
G Pde4b phosphodiesterase 4B acts_upstream_of_or_within ISO MGI:2181444 (MGI:3521611|PMID:15585880) RGD PMID:15585880 MGI:3521611 NCBI chr 5:116,799,827...117,367,707
Ensembl chr 5:116,799,971...117,367,696
JBrowse link
G Pde4d phosphodiesterase 4D acts_upstream_of_or_within ISO MGI:2451168|MGI:3525068 (MGI:3521611|PMID:15585880) RGD PMID:15585880 MGI:3521611 NCBI chr 2:40,014,933...41,529,190
Ensembl chr 2:40,019,933...41,525,884
JBrowse link
G Pf4 platelet factor 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:17,298,438...17,299,148
Ensembl chr14:17,298,308...17,299,365
JBrowse link
G Plaa phospholipase A2, activating protein involved_in ISO
ISS
(PMID:28007986)
GO_REF:0000024
RGD
UniProt
PMID:28007986 GO_REF:0000024 NCBI chr 5:109,428,600...109,460,373
Ensembl chr 5:109,428,265...109,460,282
JBrowse link
G Plau plasminogen activator, urokinase IEP RGD PMID:19184369 RGD:7241806 NCBI chr15:3,456,230...3,462,732
Ensembl chr15:3,456,232...3,462,775
JBrowse link
G Plscr1 phospholipid scramblase 1 acts_upstream_of_or_within ISO (PMID:17590392) RGD PMID:17590392 NCBI chr 8:92,784,279...92,804,698
Ensembl chr 8:92,784,356...92,804,692
JBrowse link
G Plscr2 phospholipid scramblase 2 acts_upstream_of_or_within ISO (PMID:17590392) RGD PMID:17590392 NCBI chr 8:92,809,422...92,845,947
Ensembl chr 8:92,808,398...92,845,932
JBrowse link
G Plscr3 phospholipid scramblase 3 acts_upstream_of_or_within ISO (PMID:17590392) RGD PMID:17590392 NCBI chr10:54,566,556...54,573,240
Ensembl chr10:54,566,873...54,578,709
JBrowse link
G Plscr4 phospholipid scramblase 4 acts_upstream_of_or_within ISO (PMID:17590392) RGD PMID:17590392 NCBI chr 8:92,987,290...93,026,056
Ensembl chr 8:92,987,381...93,026,049
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta IDA RGD PMID:15728586 RGD:1580656 NCBI chr20:6,298,785...6,363,970
Ensembl chr20:6,298,785...6,363,968
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:19853624 RGD:10059687 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Ppbp pro-platelet basic protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:17,302,326...17,303,130
Ensembl chr14:17,302,326...17,303,130
JBrowse link
G Prpf8 pre-mRNA processing factor 8 IDA RGD PMID:1345341 RGD:10045884 NCBI chr10:60,331,494...60,354,606
Ensembl chr10:60,331,494...60,354,606
JBrowse link
G Ptger3 prostaglandin E receptor 3 IEP RGD PMID:14636300 RGD:10043359 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO (PMID:12486103) RGD PMID:12486103 NCBI chr 1:182,601,657...182,603,013
Ensembl chr 1:182,601,174...182,602,955
JBrowse link
G Rara retinoic acid receptor, alpha involved_in ISO (MGI:4411947|PMID:19752193) RGD PMID:19752193 MGI:4411947 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
JBrowse link
G RatNP-3b defensin RatNP-3 precursor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,544,364...70,546,533
Ensembl chr16:70,513,888...70,546,522
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit acts_upstream_of_or_within
involved_in
IEP
ISO
IDA
(PMID:20547752)
(PMID:25762865)
RGD PMID:20547752 PMID:25762865 PMID:9918814 PMID:15728586 RGD:2298880, RGD:1580656 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G RGD1565355 similar to fatty acid translocase/CD36 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:17,424,749...17,465,808
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Rhoa ras homolog family member A involved_in ISO (PMID:19734146) RGD PMID:19734146 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO MGI:2446070|MGI:2660793 (MGI:2176422|PMID:11894098), (MGI:2176424|PMID:11894097) RGD PMID:11894097 PMID:11894098 MGI:2176422 MGI:2176424 NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
JBrowse link
G Sbno2 strawberry notch homolog 2 involved_in ISO (MGI:5660440|PMID:25903009) RGD PMID:25903009 MGI:5660440 NCBI chr 7:9,605,572...9,649,529
Ensembl chr 7:9,605,627...9,649,527
JBrowse link
G Selenos selenoprotein S involved_in ISO
IEA
(PMID:18675776)
GO_REF:0000107
RGD
Ensembl
PMID:18675776 GO_REF:0000107 NCBI chr 1:119,659,779...119,669,546
Ensembl chr 1:119,659,751...119,669,833
JBrowse link
G Serpine1 serpin family E member 1 involved_in IEP
ISO
IEA
(PMID:19916862)
GO_REF:0000107
RGD
Ensembl
PMID:19916862 PMID:20060032 GO_REF:0000107, RGD:13208812 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Sgms1 sphingomyelin synthase 1 IEP RGD PMID:12353928 RGD:1302423 NCBI chr 1:229,996,673...230,259,591
Ensembl chr 1:229,998,119...230,259,603
JBrowse link
G Shpk sedoheptulokinase involved_in ISO
IBA
(PMID:22682222)
(MGI:5428058|PMID:22682222)
PMID:21873635
RGD PMID:22682222 PMID:21873635 MGI:5428058, RGD:13792537 NCBI chr10:57,817,551...57,841,981
Ensembl chr10:57,817,629...57,841,980
JBrowse link
G Sirpa signal-regulatory protein alpha involved_in ISO (MGI:3760575|PMID:17954568) RGD PMID:17954568 MGI:3760575 NCBI chr 3:116,819,730...116,858,099
Ensembl chr 3:116,819,726...116,858,098
JBrowse link
G Slc12a2 solute carrier family 12 member 2 involved_in ISO (MGI:6451247|PMID:31786261) RGD PMID:31786261 MGI:6451247 NCBI chr18:51,348,282...51,416,448
Ensembl chr18:51,348,302...51,416,440
JBrowse link
G Slc7a5 solute carrier family 7 member 5 IEP RGD PMID:29687865 RGD:151357004 NCBI chr19:49,935,220...49,963,823
Ensembl chr19:49,935,220...49,963,823
JBrowse link
G Smr3b submaxillary gland androgen regulated protein 3B involved_in IDA PMID:9321881 UniProt PMID:9321881 RGD:8553737 NCBI chr14:19,783,815...19,788,557
Ensembl chr14:19,783,816...19,788,492
JBrowse link
G Socs1 suppressor of cytokine signaling 1 IEP RGD PMID:21742974 RGD:151347181 NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383
JBrowse link
G Spon2 spondin 2 acts_upstream_of_or_within ISO MGI:3026870 (MGI:2686801|PMID:14691481) RGD PMID:14691481 MGI:2686801 NCBI chr14:77,505,695...77,518,001
Ensembl chr14:77,511,901...77,517,996
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IEP RGD PMID:20149623 RGD:2325014 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
G Stap1 signal transducing adaptor family member 1 involved_in ISO (MGI:3831067|PMID:19100238) RGD PMID:19100238 MGI:3831067 NCBI chr14:21,950,466...21,981,395
Ensembl chr14:21,952,496...21,981,245
JBrowse link
G Star steroidogenic acute regulatory protein IEP RGD PMID:20665543 RGD:4145535 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
G Stat1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO MGI:1861949 (MGI:5013875|PMID:21606371) RGD PMID:21606371 MGI:5013875 NCBI chr 9:49,419,561...49,459,969
Ensembl chr 9:49,419,340...49,588,540
JBrowse link
G Tbxa2r thromboxane A2 receptor IMP RGD PMID:10513923 RGD:11059603 NCBI chr 7:8,383,347...8,390,753
Ensembl chr 7:8,383,378...8,388,176
JBrowse link
G Tfpi tissue factor pathway inhibitor IEP RGD PMID:11816723 RGD:727341 NCBI chr 3:69,533,156...69,582,547
Ensembl chr 3:69,533,156...69,576,880
JBrowse link
G Thpo thrombopoietin IEP RGD PMID:20236022 RGD:11073693 Ensembl chr11:80,182,820...80,188,167 JBrowse link
G Ticam1 toll-like receptor adaptor molecule 1 involved_in ISO (MGI:3718934|PMID:17658277) RGD PMID:17658277 MGI:3718934 NCBI chr 9:1,102,559...1,115,573
Ensembl chr 9:1,102,366...1,123,147
JBrowse link
G Ticam2 toll-like receptor adaptor molecule 2 involved_in ISO (PMID:19412184)
(PMID:22685567)
RGD PMID:19412184 PMID:22685567 NCBI chr18:39,289,902...39,311,462
Ensembl chr18:39,294,453...39,311,462
JBrowse link
G Tlr4 toll-like receptor 4 involved_in
acts_upstream_of_or_within
IEP
ISO
(MGI:4421230|PMID:20051628), (MGI:5462034|PMID:21880694), (MGI:6244743|PMID:28096568)
MGI:1860755 (MGI:1860539|PMID:10880523), (MGI:2686801|PMID:14691481), (MGI:5604854|PMID:24740015)
RNAcentral:URS000026261D_9606 (PMID:11432859), (PMID:30321456)
RGD PMID:10880523 PMID:11432859 PMID:14691481 PMID:20051628 PMID:21880694 More... MGI:1860539 MGI:2686801 MGI:4421230 MGI:5462034 MGI:5604854 MGI:6244743, RGD:7777075 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Tlr5 toll-like receptor 5 IEP RGD PMID:21308757 RGD:5129495 NCBI chr13:94,634,778...94,658,992
Ensembl chr13:94,634,801...94,657,738
JBrowse link
G Tlr9 toll-like receptor 9 IEP RGD PMID:21308757 PMID:20655116 RGD:5129495, RGD:5130179 NCBI chr 8:106,864,680...106,868,796
Ensembl chr 8:106,864,680...106,868,796
JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within IEP
ISO
IMP
(MGI:3828894|PMID:19047410), (MGI:4437182|PMID:20060382), (MGI:5013875|PMID:21606371)
(MGI:3828894|PMID:19047410), (MGI:4437182|PMID:20060382), (MGI:5013875|PMID:21606371), (MGI:5543352|PMID:23610142)
RGD PMID:19047410 PMID:20060382 PMID:21606371 PMID:23610142 PMID:15602748 More... MGI:3828894 MGI:4437182 MGI:5013875 MGI:5543352, RGD:1582142, RGD:14994703, RGD:14995441 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (PMID:19912257), (PMID:21127049), (PMID:21220427) RGD PMID:19912257 PMID:21127049 PMID:21220427 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in ISO (PMID:22480688) RGD PMID:22480688 NCBI chr 5:157,070,642...157,104,216
Ensembl chr 5:157,070,642...157,104,206
JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:20844189) RGD PMID:20844189 NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
JBrowse link
G Tnip1 TNFAIP3 interacting protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:39,037,048...39,084,328
Ensembl chr10:39,037,058...39,077,625
JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 involved_in ISO
IBA
(MGI:3656197|PMID:16633345)
PMID:21873635
RGD PMID:16633345 PMID:21873635 MGI:3656197, RGD:13792537 NCBI chr14:76,228,283...76,246,609
Ensembl chr14:76,228,371...76,275,265
JBrowse link
G Tnip3 TNFAIP3 interacting protein 3 involved_in ISO (PMID:17088249) RGD PMID:17088249 NCBI chr 4:94,867,258...94,908,780
Ensembl chr 4:94,811,097...94,907,605
JBrowse link
G Traf6 TNF receptor associated factor 6 acts_upstream_of_or_within ISO (PMID:23776175) RGD PMID:23776175 NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507
JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 IEP RGD PMID:26383906 RGD:127284850 NCBI chr 9:12,763,819...12,779,285
Ensembl chr 9:12,763,819...12,779,203
JBrowse link
G Trim41 tripartite motif-containing 41 involved_in ISO (PMID:27812135) RGD PMID:27812135 NCBI chr10:33,175,213...33,186,472
Ensembl chr10:33,175,213...33,186,694
JBrowse link
G Tspo translocator protein IEP RGD PMID:14678758 RGD:2317158 NCBI chr 7:114,720,188...114,730,450
Ensembl chr 7:114,720,188...114,730,450
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:26255671) RGD PMID:26255671 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568
JBrowse link
G Vim vimentin involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:27812135)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:27812135 GO_REF:0000024 GO_REF:0000107 NCBI chr17:76,668,701...76,677,186
Ensembl chr17:76,668,647...76,677,187
JBrowse link
G Vldlr very low density lipoprotein receptor IEP RGD PMID:16376325 RGD:1625574 NCBI chr 1:224,813,539...224,850,400
Ensembl chr 1:224,814,377...224,845,920
JBrowse link
G Vwf von Willebrand factor IEP RGD PMID:17708840 RGD:11079229 NCBI chr 4:158,360,152...158,491,539
Ensembl chr 4:158,360,152...158,491,539
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:18174455) RGD PMID:18174455 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5605956|PMID:12612580)
(PMID:11460154)
UniProt
Ensembl
RGD
PMID:11460154 PMID:12612580 GO_REF:0000024 GO_REF:0000107 MGI:5605956 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO
ISS
(PMID:18178554), (PMID:19909337), (PMID:22055188), (PMID:25861989)
(MGI:3842851|PMID:19322177), (MGI:5142149|PMID:21616078), (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671)
GO_REF:0000024
RGD
UniProt
PMID:18178554 PMID:19322177 PMID:19909337 PMID:21616078 PMID:22055188 More... GO_REF:0000024 MGI:3842851 MGI:5142149 MGI:5706859 MGI:5751631 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
G Zfp36 zinc finger protein 36 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:4457258|PMID:10330172), (MGI:5784995|PMID:11533235), (MGI:5784999|PMID:9703499), (MGI:5795816|PMID:22844456)
GO_REF:0000024
(PMID:14679154), (PMID:14766228), (PMID:15187101)
Ensembl
RGD
UniProt
PMID:9703499 PMID:10330172 PMID:11533235 PMID:14679154 PMID:14766228 More... GO_REF:0000024 GO_REF:0000107 MGI:4457258 MGI:5784995 MGI:5784999 MGI:5795816 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
cellular response to lipoteichoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl20 C-C motif chemokine ligand 20 IEP RGD PMID:15618187 RGD:7483631 NCBI chr 9:84,389,031...84,391,629
Ensembl chr 9:84,388,904...84,391,629
JBrowse link
G Cd14 CD14 molecule acts_upstream_of_or_within ISO (PMID:12594207) RGD PMID:12594207 NCBI chr18:28,335,522...28,337,383
Ensembl chr18:28,335,340...28,337,261
JBrowse link
G Cd36 CD36 molecule acts_upstream_of_or_within ISO MGI:1931790|MGI:2447190|MGI:3573941 (MGI:3528769|PMID:15690042), (MGI:3587138|PMID:16061696) RGD PMID:15690042 PMID:16061696 MGI:3528769 MGI:3587138 NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Defb43 defensin beta 43 involved_in ISO (PMID:26649771) RGD PMID:26649771 NCBI chr15:37,272,008...37,276,626
Ensembl chr15:37,272,008...37,276,626
JBrowse link
G Lbp lipopolysaccharide binding protein acts_upstream_of_or_within ISO (PMID:12594207) RGD PMID:12594207 NCBI chr 3:146,953,889...146,981,032
Ensembl chr 3:146,954,015...146,981,586
JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in ISO
IEA
(PMID:26649771)
GO_REF:0000107
RGD
Ensembl
PMID:26649771 GO_REF:0000107 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:26649771) RGD PMID:26649771 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G RGD1565355 similar to fatty acid translocase/CD36 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:17,424,749...17,465,808
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO MGI:2660793 (MGI:2176422|PMID:11894098) RGD PMID:11894098 MGI:2176422 NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
JBrowse link
G Tirap TIR domain containing adaptor protein acts_upstream_of_or_within ISO MGI:3573942 (MGI:3528769|PMID:15690042) RGD PMID:15690042 MGI:3528769 NCBI chr 8:33,531,724...33,548,508
Ensembl chr 8:33,531,725...33,547,432
JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within
involved_in
ISO MGI:2674036 (MGI:3528769|PMID:15690042)
(PMID:12594207)
(PMID:26649771)
RGD PMID:12594207 PMID:15690042 PMID:26649771 MGI:3528769 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
G Tlr4 toll-like receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1860885 (MGI:2178646|PMID:10549626)
Ensembl
RGD
PMID:10549626 GO_REF:0000107 MGI:2178646 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5572888|PMID:12847223) RGD PMID:12847223 MGI:5572888 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
cellular response to molecule of bacterial origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (MGI:5489057|PMID:19014335) RGD PMID:19014335 MGI:5489057 NCBI chr15:79,871,819...79,881,101
Ensembl chr15:79,871,827...79,880,529
JBrowse link
G Cd14 CD14 molecule involved_in ISO (PMID:15039339) RGD PMID:15039339 NCBI chr18:28,335,522...28,337,383
Ensembl chr18:28,335,340...28,337,261
JBrowse link
G Cyrib CYFIP related Rac1 interactor B involved_in ISO (PMID:31285585)
(MGI:6383257|PMID:31285585)
RGD PMID:31285585 MGI:6383257 NCBI chr 7:95,633,876...95,760,588
Ensembl chr 7:95,633,876...95,697,686
JBrowse link
G Fcgr2b Fc gamma receptor 2B acts_upstream_of_or_within ISO MGI:1857166 (MGI:3608295|PMID:12385742) RGD PMID:12385742 MGI:3608295 NCBI chr13:83,191,253...83,207,776
Ensembl chr13:83,193,163...83,207,778
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO
IEA
(PMID:16601243)
GO_REF:0000107
RGD
Ensembl
PMID:16601243 GO_REF:0000107 NCBI chr 9:66,117,370...66,119,127
Ensembl chr 9:66,113,112...66,121,457
JBrowse link
G Ncam1 neural cell adhesion molecule 1 IEP RGD PMID:19853610 RGD:2325979 NCBI chr 8:49,865,629...50,165,687
Ensembl chr 8:49,865,633...50,166,014
JBrowse link
G Sirt2 sirtuin 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:23908241)
UniProt
RGD
PMID:23908241 GO_REF:0000024 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
G Tnf tumor necrosis factor IEP streptococcal cell wall RGD PMID:1580332 RGD:38508902 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (MGI:4835148|PMID:16601243) RGD PMID:16601243 MGI:4835148 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
cellular response to peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camp cathelicidin antimicrobial peptide IEP RGD PMID:19879657 RGD:2316237 NCBI chr 8:109,841,729...109,843,543
Ensembl chr 8:109,841,729...109,843,543
JBrowse link
G Defb25 defensin beta 25 involved_in IBA
ISO
PMID:21873635
(PMID:24955228)
RGD PMID:24955228 PMID:21873635 RGD:13792537 NCBI chr 3:141,098,856...141,099,696
Ensembl chr 3:141,098,856...141,099,696
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 involved_in ISO (MGI:5790524|PMID:27374331) RGD PMID:27374331 MGI:5790524 NCBI chr10:44,326,770...44,353,814
Ensembl chr10:44,328,566...44,352,811
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within IEP
ISO
MGI:2680581 (MGI:3686795|PMID:16949315) RGD PMID:16949315 PMID:24169446 MGI:3686795, RGD:13204728 NCBI chr19:18,379,720...18,422,817
Ensembl chr19:18,382,439...18,417,177
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:24955228) RGD PMID:24955228 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO MGI:2660793 (MGI:2176422|PMID:11894098) RGD PMID:11894098 MGI:2176422 NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO (MGI:3686795|PMID:16949315) RGD PMID:16949315 MGI:3686795 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5572888|PMID:12847223) RGD PMID:12847223 MGI:5572888 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
cellular response to triacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in ISO
ISS
(PMID:16880211)
GO_REF:0000024
RGD
UniProt
PMID:16880211 GO_REF:0000024 NCBI chr18:28,335,522...28,337,383
Ensembl chr18:28,335,340...28,337,261
JBrowse link
G Tlr1 toll-like receptor 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:19931471)
(PMID:16880211)
RGD PMID:16880211 PMID:19931471 PMID:21873635 RGD:13792537 NCBI chr14:43,384,127...43,396,765
Ensembl chr14:43,384,932...43,397,125
JBrowse link
G Tlr2 toll-like receptor 2 involved_in
acts_upstream_of_or_within
ISO (PMID:16880211)
(PMID:19931471)
RGD PMID:16880211 PMID:19931471 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
detection of bacterial lipoprotein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmbt1 deleted in malignant brain tumors 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:185,617,469...185,696,476
Ensembl chr 1:185,617,294...185,696,478
JBrowse link
G Ssc5d scavenger receptor cysteine rich family member with 5 domains involved_in IBA
ISO
PMID:21873635
(MGI:4939978|PMID:21217009)
RGD PMID:21217009 PMID:21873635 MGI:4939978, RGD:13792537 NCBI chr 1:68,891,942...68,910,462
Ensembl chr 1:68,891,949...68,909,743
JBrowse link
detection of diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO (PMID:19931471) RGD PMID:19931471 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
G Tlr6 toll-like receptor 6 acts_upstream_of_or_within ISO (PMID:19931471) RGD PMID:19931471 NCBI chr14:43,362,164...43,374,500
Ensembl chr14:43,362,164...43,375,685
JBrowse link
detection of lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ly96 lymphocyte antigen 96 involved_in ISO (PMID:19252480) RGD PMID:19252480 NCBI chr 5:2,582,233...2,612,357
Ensembl chr 5:2,582,254...2,612,386
JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in ISO (PMID:12651854) RGD PMID:12651854 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647
JBrowse link
G Tlr4 toll-like receptor 4 involved_in ISO
ISS
IEA
(PMID:19252480)
GO_REF:0000024
(MGI:5913054|PMID:28098138)
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:19252480 PMID:28098138 GO_REF:0000024 GO_REF:0000107 MGI:5913054 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5572888|PMID:12847223) RGD PMID:12847223 MGI:5572888 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
detection of lipoteichoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5572888|PMID:12847223) RGD PMID:12847223 MGI:5572888 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
detection of molecule of bacterial origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C4b complement C4B (Chido blood group) involved_in ISO (PMID:22333221) RGD PMID:22333221 NCBI chr20:4,197,371...4,211,684
Ensembl chr20:4,197,366...4,211,681
JBrowse link
G Lbp lipopolysaccharide binding protein involved_in ISO (PMID:11528597) RGD PMID:11528597 NCBI chr 3:146,953,889...146,981,032
Ensembl chr 3:146,954,015...146,981,586
JBrowse link
detection of muramyl dipeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within
ISO (PMID:15998797)
(PMID:12527755)
RGD PMID:12527755 PMID:15998797 NCBI chr19:18,379,720...18,422,817
Ensembl chr19:18,382,439...18,417,177
JBrowse link
detection of peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5572888|PMID:12847223) RGD PMID:12847223 MGI:5572888 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
detection of triacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr1 toll-like receptor 1 acts_upstream_of_or_within ISO (PMID:19931471) RGD PMID:19931471 NCBI chr14:43,384,127...43,396,765
Ensembl chr14:43,384,932...43,397,125
JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO (PMID:19931471) RGD PMID:19931471 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 acts_upstream_of_or_within ISO (MGI:5604854|PMID:24740015) RGD PMID:24740015 MGI:5604854 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Bcl10 BCL10, immune signaling adaptor involved_in ISO
ISS
(PMID:16831874)
GO_REF:0000024
RGD
UniProt
PMID:16831874 GO_REF:0000024 NCBI chr 2:234,840,880...234,850,520
Ensembl chr 2:234,840,858...234,850,523
JBrowse link
G Bpi bactericidal/permeability-increasing protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:146,909,626...146,936,487
Ensembl chr 3:146,909,629...146,936,221
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 involved_in ISO (PMID:21147091) RGD PMID:21147091 NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
JBrowse link
G Ccl3 C-C motif chemokine ligand 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:21147091)
UniProt
RGD
PMID:21147091 GO_REF:0000024 NCBI chr10:68,451,388...68,452,938
Ensembl chr10:68,451,388...68,452,938
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:21147091) RGD PMID:21147091 NCBI chr10:68,322,826...68,327,365
Ensembl chr10:68,322,829...68,327,377
JBrowse link
G Cd14 CD14 molecule involved_in IBA
ISO
PMID:21873635
(MGI:5645195|PMID:24380872)
RGD PMID:24380872 PMID:21873635 MGI:5645195, RGD:13792537 NCBI chr18:28,335,522...28,337,383
Ensembl chr18:28,335,340...28,337,261
JBrowse link
G Cd180 CD180 molecule acts_upstream_of
involved_in
ISO
IEA
MGI:1321404|MGI:96824 (MGI:1860539|PMID:10880523)
GO_REF:0000107
RGD
Ensembl
PMID:10880523 GO_REF:0000107 MGI:1860539 NCBI chr 2:33,855,940...33,870,046
Ensembl chr 2:33,855,991...33,899,936
JBrowse link
G Cd6 Cd6 molecule involved_in ISO (PMID:17601777) RGD PMID:17601777 NCBI chr 1:207,442,873...207,481,703
Ensembl chr 1:207,442,877...207,481,634
JBrowse link
G Il18 interleukin 18 involved_in IEA
ISO
GO_REF:0000107
(PMID:21147091)
Ensembl
RGD
PMID:21147091 GO_REF:0000107 NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
JBrowse link
G Il1b interleukin 1 beta involved_in ISO (PMID:21147091) RGD PMID:21147091 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:10383454)
(MGI:2178646|PMID:10549626), (MGI:2669022|PMID:12855817)
RGD PMID:10383454 PMID:10549626 PMID:12855817 MGI:2178646 MGI:2669022 NCBI chr  X:151,768,621...151,778,521
Ensembl chr  X:151,768,777...151,778,521
JBrowse link
G Irak2 interleukin-1 receptor-associated kinase 2 acts_upstream_of_or_within ISO (MGI:3046371|PMID:15082713) RGD PMID:15082713 MGI:3046371 NCBI chr 4:146,786,004...146,842,615
Ensembl chr 4:146,786,100...146,842,602
JBrowse link
G Irf3 interferon regulatory factor 3 acts_upstream_of_or_within ISO (MGI:2669022|PMID:12855817), (MGI:2670551|PMID:12872135) RGD PMID:12855817 PMID:12872135 MGI:2669022 MGI:2670551 NCBI chr 1:95,479,966...95,484,926
Ensembl chr 1:95,479,821...95,484,935
JBrowse link
G Lbp lipopolysaccharide binding protein involved_in ISO
IBA
(PMID:11739189), (PMID:8409400)
PMID:21873635
RGD PMID:8409400 PMID:11739189 PMID:21873635 RGD:13792537 NCBI chr 3:146,953,889...146,981,032
Ensembl chr 3:146,954,015...146,981,586
JBrowse link
G Ly86 lymphocyte antigen 86 acts_upstream_of ISO MGI:1194924|MGI:96824 (MGI:1860539|PMID:10880523) RGD PMID:10880523 MGI:1860539 NCBI chr17:27,415,807...27,499,695
Ensembl chr17:27,415,830...27,487,260
JBrowse link
G Ly96 lymphocyte antigen 96 involved_in
acts_upstream_of
ISO (MGI:5645195|PMID:24380872)
MGI:1194924|MGI:96824 (MGI:1860539|PMID:10880523)
RGD PMID:10880523 PMID:24380872 MGI:1860539 MGI:5645195 NCBI chr 5:2,582,233...2,612,357
Ensembl chr 5:2,582,254...2,612,386
JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in ISS
ISO
GO_REF:0000024
(MGI:4456928|PMID:20385881)
UniProt
RGD
PMID:20385881 GO_REF:0000024 MGI:4456928 NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868
JBrowse link
G Malt1 MALT1 paracaspase involved_in ISO (MGI:3694380|PMID:16831874) RGD PMID:16831874 MGI:3694380 NCBI chr18:58,942,282...58,996,318
Ensembl chr18:58,942,299...58,994,260
JBrowse link
G Mapk1 mitogen activated protein kinase 1 acts_upstream_of_or_within ISO (MGI:2670551|PMID:12872135) RGD PMID:12872135 MGI:2670551 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:2670551|PMID:12872135)
Ensembl
RGD
PMID:12872135 GO_REF:0000107 MGI:2670551 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO (MGI:2670551|PMID:12872135) RGD PMID:12872135 MGI:2670551 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
JBrowse link
G Mtdh metadherin involved_in ISO (PMID:19740331) RGD PMID:19740331 NCBI chr 7:65,306,464...65,365,647
Ensembl chr 7:65,306,400...65,364,413
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor acts_upstream_of_or_within ISO MGI:2385681 (MGI:2669022|PMID:12855817) RGD PMID:12855817 MGI:2669022 NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
JBrowse link
G Nfkbia NFKB inhibitor alpha acts_upstream_of_or_within ISO (MGI:2670551|PMID:12872135), (MGI:3775161|PMID:18261938) RGD PMID:12872135 PMID:18261938 MGI:2670551 MGI:3775161 NCBI chr 6:72,858,713...72,861,941
Ensembl chr 6:72,858,712...72,861,941
JBrowse link
G Nos3 nitric oxide synthase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857229 (MGI:3576391|PMID:15647265)
Ensembl
RGD
PMID:15647265 GO_REF:0000107 MGI:3576391 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
JBrowse link
G Nr2c2 nuclear receptor subfamily 2, group C, member 2 acts_upstream_of_or_within ISO MGI:1860755 (MGI:1316861|PMID:9851930) RGD PMID:9851930 MGI:1316861 NCBI chr 4:124,610,216...124,666,813
Ensembl chr 4:124,608,960...124,661,902
JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in ISO
IEA
(PMID:32514138)
GO_REF:0000107
RGD
Ensembl
PMID:32514138 GO_REF:0000107 NCBI chr19:45,547,416...45,683,930
Ensembl chr19:45,547,416...45,683,930
JBrowse link
G Prkce protein kinase C, epsilon involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
MGI:3609215 (MGI:3609210|PMID:11696589)
(MGI:3652658|PMID:16757566)
UniProt
Ensembl
RGD
PMID:11696589 PMID:16757566 GO_REF:0000024 GO_REF:0000107 MGI:3609210 MGI:3652658 NCBI chr 6:7,965,048...8,451,966
Ensembl chr 6:7,965,048...8,451,719
JBrowse link
G Ptafr platelet-activating factor receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:85738|PMID:9013981)
GOC
RGD
PMID:9013981 GO_REF:0000108 MGI:85738 NCBI chr 5:144,765,770...144,795,057
Ensembl chr 5:144,765,976...144,795,251
JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 involved_in ISO (PMID:23991106) RGD PMID:23991106 NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO MGI:2660793 (MGI:2176422|PMID:11894098) RGD PMID:11894098 MGI:2176422 NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647
JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (MGI:6459415|PMID:30718772) RGD PMID:30718772 MGI:6459415 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
JBrowse link
G Stat1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO (MGI:2670551|PMID:12872135) RGD PMID:12872135 MGI:2670551 NCBI chr 9:49,419,561...49,459,969
Ensembl chr 9:49,419,340...49,588,540
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO
ISS
(PMID:21147091)
GO_REF:0000024
RGD
UniProt
PMID:21147091 GO_REF:0000024 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Ticam1 toll-like receptor adaptor molecule 1 acts_upstream_of_or_within ISO MGI:2679794|MGI:3029019 (MGI:2669022|PMID:12855817), (MGI:2670551|PMID:12872135) RGD PMID:12855817 PMID:12872135 MGI:2669022 MGI:2670551 NCBI chr 9:1,102,559...1,115,573
Ensembl chr 9:1,102,366...1,123,147
JBrowse link
G Tlr4 toll-like receptor 4 involved_in
NOT|acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:10880523)
UniProtKB:O95711|UniProtKB:Q9Y6Y9 (PMID:10880523)
MGI:1194924|MGI:1321404|MGI:1341909 (MGI:1860539|PMID:10880523)
(MGI:5913054|PMID:28098138)
Ensembl
RGD
PMID:10880523 PMID:28098138 GO_REF:0000107 MGI:1860539 MGI:5913054 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:21147091) RGD PMID:21147091 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
negative regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:20829348) RGD PMID:20829348 NCBI chr 7:8,391,396...8,397,219
Ensembl chr 7:8,391,397...8,396,829
JBrowse link
G Defb21 defensin beta 21 involved_in ISO (PMID:33181266) RGD PMID:33181266 NCBI chr 3:141,042,844...141,044,159
Ensembl chr 3:141,042,810...141,044,184
JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:20345905) RGD PMID:20345905 NCBI chr 8:110,999,948...111,022,795
Ensembl chr 8:110,999,948...111,022,795
JBrowse link
G Nfkbil1 NFKB inhibitor like 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20829348)
UniProt
RGD
PMID:20829348 GO_REF:0000024 NCBI chr20:3,589,974...3,608,348
Ensembl chr20:3,590,642...3,605,616
JBrowse link
G Nlrp1b NLR family, pyrin domain containing 1B involved_in ISO (PMID:11821383) RGD PMID:11821383 NCBI chr10:55,838,381...55,904,374
Ensembl chr10:55,843,001...55,912,774
JBrowse link
G Prdm1 PR/SET domain 1 acts_upstream_of_or_within ISO (MGI:3826899|PMID:18845144) RGD PMID:18845144 MGI:3826899 NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488
JBrowse link
G Prdx2 peroxiredoxin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2668456 (MGI:3758374|PMID:17325201)
Ensembl
RGD
PMID:17325201 GO_REF:0000107 MGI:3758374 NCBI chr19:23,180,927...23,186,217
Ensembl chr19:23,180,930...23,186,194
JBrowse link
G Trib1 tribbles pseudokinase 1 involved_in ISO (PMID:17452330) RGD PMID:17452330 NCBI chr 7:91,206,579...91,213,126
Ensembl chr 7:91,206,579...91,214,731
JBrowse link
positive regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 involved_in ISO (MGI:4352622|PMID:19252488) RGD PMID:19252488 MGI:4352622 NCBI chr17:26,318,121...26,469,034
Ensembl chr17:26,318,569...26,470,365
JBrowse link
G Cd14 CD14 molecule involved_in ISS
ISO
GO_REF:0000024
(MGI:5645195|PMID:24380872)
UniProt
RGD
PMID:24380872 GO_REF:0000024 MGI:5645195 NCBI chr18:28,335,522...28,337,383
Ensembl chr18:28,335,340...28,337,261
JBrowse link
G Cd180 CD180 molecule involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
UniProtKB:O95711 (PMID:10880523)
MGI:1321404|MGI:96824 (MGI:1860539|PMID:10880523)
RGD PMID:10880523 PMID:21873635 MGI:1860539, RGD:13792537 NCBI chr 2:33,855,940...33,870,046
Ensembl chr 2:33,855,991...33,899,936
JBrowse link
G Ly86 lymphocyte antigen 86 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:1194924|MGI:96824 (MGI:1860539|PMID:10880523)
PMID:21873635
UniProtKB:Q99467 (PMID:10880523)
RGD PMID:10880523 PMID:21873635 MGI:1860539, RGD:13792537 NCBI chr17:27,415,807...27,499,695
Ensembl chr17:27,415,830...27,487,260
JBrowse link
G Ly96 lymphocyte antigen 96 acts_upstream_of_or_within ISO MGI:1194924|MGI:96824 (MGI:1860539|PMID:10880523) RGD PMID:10880523 MGI:1860539 NCBI chr 5:2,582,233...2,612,357
Ensembl chr 5:2,582,254...2,612,386
JBrowse link
G Mif macrophage migration inhibitory factor involved_in ISO (MGI:2156302|PMID:11756671) RGD PMID:11756671 MGI:2156302 NCBI chr20:12,790,919...12,791,784
Ensembl chr20:12,790,902...12,799,504
JBrowse link
G Prkca protein kinase C, alpha involved_in ISS
ISO
GO_REF:0000024
(PMID:9830023)
UniProt
RGD
PMID:9830023 GO_REF:0000024 NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012
JBrowse link
G Sash1 SAM and SH3 domain containing 1 acts_upstream_of_or_within ISO (PMID:23776175) RGD PMID:23776175 NCBI chr 1:3,119,915...3,418,536
Ensembl chr 1:3,121,332...3,439,870
JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in ISO (MGI:5913054|PMID:28098138) RGD PMID:28098138 MGI:5913054 NCBI chr10:55,507,593...55,528,288
Ensembl chr10:55,507,519...55,528,171
JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISO (MGI:1335941|PMID:10215628) RGD PMID:10215628 MGI:1335941 NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507
JBrowse link
regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd55 CD55 molecule (Cromer blood group) involved_in ISO (PMID:12731067) RGD PMID:12731067 NCBI chr13:41,857,242...41,885,966
Ensembl chr13:41,857,395...41,885,831
JBrowse link
G Cd84 CD84 molecule involved_in ISO (MGI:5700297|PMID:20628063) RGD PMID:20628063 MGI:5700297 NCBI chr13:84,327,580...84,367,153
Ensembl chr13:84,327,553...84,362,076
JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 involved_in ISO
IEA
(PMID:10652441)
GO_REF:0000107
RGD
Ensembl
PMID:10652441 GO_REF:0000107 NCBI chr19:10,227,337...10,237,826
Ensembl chr19:10,227,340...10,236,833
JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:21512573) RGD PMID:21512573 NCBI chr 1:158,720,407...158,737,393
Ensembl chr 1:158,720,410...158,814,012
JBrowse link
G Tut4 terminal uridylyl transferase 4 acts_upstream_of_or_within ISO (MGI:3624478|PMID:16643855) RGD PMID:16643855 MGI:3624478 NCBI chr 5:123,201,723...123,306,582
Ensembl chr 5:123,203,003...123,306,465
JBrowse link
response to bacterial lipoprotein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr1 toll-like receptor 1 IDA Pam3CSK4 - a synthetic tripalmitoylated lipopeptide that mimicks the acylated amino terminus of bacterial LPs RGD PMID:16973131 RGD:1643119 NCBI chr14:43,384,127...43,396,765
Ensembl chr14:43,384,932...43,397,125
JBrowse link
G Tlr2 toll-like receptor 2 IDA Pam3CSK4 - a synthetic tripalmitoylated lipopeptide that mimicks the acylated amino terminus of bacterial LPs RGD PMID:16973131 RGD:1643119 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
G Tlr6 toll-like receptor 6 IDA FSL1 - a diacylated synthetic lipoprotein RGD PMID:16973131 RGD:1643119 NCBI chr14:43,362,164...43,374,500
Ensembl chr14:43,362,164...43,375,685
JBrowse link
response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:28842383 RGD:13446404 NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709
JBrowse link
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B IEP RGD PMID:17285300 RGD:2301914 NCBI chr 4:25,242,761...25,325,194
Ensembl chr 4:25,242,798...25,325,199
JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 IEP RGD PMID:28842383 RGD:13446404 NCBI chr 1:242,664,657...242,723,239
Ensembl chr 1:242,664,657...242,723,238
JBrowse link
G Abcc3 ATP binding cassette subfamily C member 3 IEP RGD PMID:18505788 RGD:2301058 NCBI chr10:79,296,681...79,342,749
Ensembl chr10:79,296,693...79,342,595
JBrowse link
G Abcc5 ATP binding cassette subfamily C member 5 IEP RGD PMID:15134348 RGD:2301082 NCBI chr11:80,473,809...80,567,257
Ensembl chr11:80,473,872...80,567,253
JBrowse link
G Abcc8 ATP binding cassette subfamily C member 8 IEP RGD PMID:17285300 RGD:2301914 NCBI chr 1:96,598,663...96,679,495
Ensembl chr 1:96,598,647...96,679,510
JBrowse link
G Abcg2 ATP binding cassette subfamily G member 2 IEP RGD PMID:18505788 RGD:2301058 NCBI chr 4:87,676,241...87,802,757
Ensembl chr 4:87,745,319...87,802,409
JBrowse link
G Abr ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:2388713 (MGI:4366690|PMID:19703997) RGD PMID:19703997 MGI:4366690 NCBI chr10:61,262,516...61,461,331
Ensembl chr10:61,262,516...61,461,505
JBrowse link
G Ace angiotensin I converting enzyme IMP RGD PMID:19114890 RGD:2325231 NCBI chr10:90,910,316...90,930,437
Ensembl chr10:90,910,316...90,931,131
JBrowse link
G Acod1 aconitate decarboxylase 1 acts_upstream_of_or_within ISO (MGI:72790|PMID:7721348) RGD PMID:7721348 MGI:72790 NCBI chr15:79,871,819...79,881,101
Ensembl chr15:79,871,827...79,880,529
JBrowse link
G Acp5 acid phosphatase 5, tartrate resistant acts_upstream_of_or_within ISO MGI:2180086 (MGI:1930064|PMID:11168643) RGD PMID:11168643 MGI:1930064 NCBI chr 8:20,663,984...20,670,604
Ensembl chr 8:20,663,985...20,667,929
JBrowse link
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO (PMID:18383040) RGD PMID:18383040 NCBI chr 6:40,872,936...40,920,700
Ensembl chr 6:40,872,856...40,920,639
JBrowse link
G Adh5 alcohol dehydrogenase 5 (class III), chi polypeptide acts_upstream_of_or_within ISO MGI:3033711 (MGI:3032823|PMID:14980227) RGD PMID:14980227 MGI:3032823 NCBI chr 2:226,975,184...226,987,591
Ensembl chr 2:226,947,466...226,987,591
JBrowse link
G Adipor2 adiponectin receptor 2 IEP RGD PMID:23838384 RGD:8695926 NCBI chr 4:152,524,604...152,588,848
Ensembl chr 4:152,524,623...152,559,355
JBrowse link
G Adm adrenomedullin IMP RGD PMID:16378176 RGD:1625325 NCBI chr 1:164,745,484...164,747,655
Ensembl chr 1:164,745,466...164,747,654
JBrowse link
G Akap12 A-kinase anchoring protein 12 IEP RGD PMID:23912647 RGD:14348970 NCBI chr 1:40,730,123...40,819,863
Ensembl chr 1:40,730,123...40,819,886
JBrowse link
G Akirin2 akirin 2 acts_upstream_of_or_within ISO MGI:3796163 (MGI:3771766|PMID:18066067) RGD PMID:18066067 MGI:3771766 NCBI chr 5:49,108,231...49,122,566
Ensembl chr 5:49,108,220...49,122,568
JBrowse link
G Alad aminolevulinate dehydratase IEP plus D-galactosamine RGD PMID:19344711 RGD:4144148 NCBI chr 5:75,961,993...75,972,334
Ensembl chr 5:75,961,993...75,972,474
JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member IEP RGD PMID:11578593 RGD:1599044 NCBI chr12:34,949,549...34,982,527
Ensembl chr12:34,901,219...34,982,521
JBrowse link
G Aldoa aldolase, fructose-bisphosphate A IEP RGD PMID:16930621 RGD:1599054 NCBI chr 1:181,402,275...181,407,476
Ensembl chr 1:181,402,275...181,406,182
JBrowse link
G Alpl alkaline phosphatase, biomineralization associated IEP RGD PMID:11810315 RGD:2315621 NCBI chr 5:149,951,397...150,006,424
Ensembl chr 5:149,951,409...150,006,446
JBrowse link
G Apob apolipoprotein B IEP RGD PMID:16719989 RGD:1599165 NCBI chr 6:30,844,386...30,883,983
Ensembl chr 6:30,844,368...30,892,497
JBrowse link
G Aqp2 aquaporin 2 IEP RGD PMID:18824919 RGD:2313129 NCBI chr 7:130,711,433...130,716,468
Ensembl chr 7:130,711,413...130,716,468
JBrowse link
G Arg1 arginase 1 IEP RGD PMID:10652239 PMID:9686345 RGD:1599265, RGD:4139908 NCBI chr 1:20,475,878...20,488,422
Ensembl chr 1:20,475,968...20,488,422
JBrowse link
G Asl argininosuccinate lyase IEP RGD PMID:10652239 PMID:8576237 RGD:1599265, RGD:4140434 NCBI chr12:26,659,664...26,677,136
Ensembl chr12:26,659,565...26,679,662
JBrowse link
G Ass1 argininosuccinate synthase 1 IEP RGD PMID:12589771 RGD:1599307 NCBI chr 3:14,747,355...14,796,909
Ensembl chr 3:14,747,368...14,796,903
JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 IEP RGD PMID:25712896 RGD:13507309 NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101
JBrowse link
G Atp4b ATPase H+/K+ transporting subunit beta IEP RGD PMID:15024311 RGD:2301243 NCBI chr16:76,144,150...76,153,063
Ensembl chr16:76,144,150...76,153,063
JBrowse link
G Bcl2l1 Bcl2-like 1 IEP RGD PMID:18838949 RGD:11353808 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:2154396 (MGI:4366690|PMID:19703997) RGD PMID:19703997 MGI:4366690 NCBI chr20:13,471,679...13,596,497
Ensembl chr20:13,471,668...13,597,016
JBrowse link
G Bdkrb1 bradykinin receptor B1 acts_upstream_of_or_within IEP
ISO
(MGI:79500|PMID:8602848) RGD PMID:8602848 PMID:19561153 MGI:79500, RGD:5129225 NCBI chr 6:124,510,827...124,514,475
Ensembl chr 6:124,510,870...124,513,747
JBrowse link
G Btk Bruton tyrosine kinase IMP RGD PMID:28352114 RGD:151665126 NCBI chr  X:97,722,796...97,762,315
Ensembl chr  X:97,722,802...97,761,853
JBrowse link
G C5ar1 complement C5a receptor 1 IEP RGD PMID:15322206 RGD:1600596 NCBI chr 1:76,948,622...76,959,826 JBrowse link
G Casp1 caspase 1 involved_in
acts_upstream_of_or_within
IMP
IEA
ISO
GO_REF:0000107
(MGI:3713415|PMID:16301672)
Ensembl
RGD
PMID:16301672 PMID:17384935 GO_REF:0000107 MGI:3713415, RGD:2315892 NCBI chr 8:2,587,812...2,597,403
Ensembl chr 8:2,587,831...2,597,383
JBrowse link
G Casp3 caspase 3 IEP RGD PMID:18289516 RGD:2293323 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
JBrowse link
G Casp8 caspase 8 IEP RGD PMID:18289516 RGD:2293323 NCBI chr 9:60,263,863...60,312,542
Ensembl chr 9:60,264,075...60,312,542
JBrowse link
G Casp9 caspase 9 IEP RGD PMID:18289516 RGD:2293323 NCBI chr 5:154,108,872...154,126,628
Ensembl chr 5:154,109,046...154,126,626
JBrowse link
G Cbr1 carbonyl reductase 1 IEP RGD PMID:12399253 RGD:2316279 NCBI chr11:32,860,618...32,862,981
Ensembl chr11:32,857,991...32,895,275
JBrowse link
G Cckar cholecystokinin A receptor IEP RGD PMID:17622698 RGD:2313275 NCBI chr14:57,292,397...57,300,747
Ensembl chr14:57,292,397...57,300,747
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IEP RGD PMID:19111613 RGD:2307002 NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 IEP RGD PMID:19104678 RGD:2306302 NCBI chr10:68,322,826...68,327,365
Ensembl chr10:68,322,829...68,327,377
JBrowse link
G Ccr5 C-C motif chemokine receptor 5 IEP RGD PMID:19104678 RGD:2306302 NCBI chr 8:123,752,423...123,757,538
Ensembl chr 8:123,752,325...123,759,260
JBrowse link
G Ccr7 C-C motif chemokine receptor 7 involved_in ISO (MGI:5285155|PMID:20638137) RGD PMID:20638137 MGI:5285155 NCBI chr10:84,098,193...84,108,309
Ensembl chr10:84,097,381...84,108,309
JBrowse link
G Cd14 CD14 molecule IEP RGD PMID:16631199 RGD:2313381 NCBI chr18:28,335,522...28,337,383
Ensembl chr18:28,335,340...28,337,261
JBrowse link
G Cd6 Cd6 molecule involved_in ISO (PMID:17601777) RGD PMID:17601777 NCBI chr 1:207,442,873...207,481,703
Ensembl chr 1:207,442,877...207,481,634
JBrowse link
G Cd86 CD86 molecule IEP RGD PMID:17935670 RGD:2313436 NCBI chr11:64,142,193...64,200,816
Ensembl chr11:64,163,828...64,200,818
JBrowse link
G Cd96 CD96 molecule acts_upstream_of_or_within ISO MGI:5617136 (MGI:5569209|PMID:24658051) RGD PMID:24658051 MGI:5569209 NCBI chr11:54,702,290...54,776,618
Ensembl chr11:54,702,290...54,776,621
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta involved_in ISO (MGI:3760491|PMID:17724128) RGD PMID:17724128 MGI:3760491 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
JBrowse link
G Cfb complement factor B IEP RGD PMID:18023983 RGD:2311336 NCBI chr20:3,970,643...3,976,510
Ensembl chr20:3,951,474...3,976,505
JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex IDA RGD PMID:14572607 RGD:2298665 NCBI chr 1:242,959,539...242,995,066
Ensembl chr 1:242,959,760...242,995,065
JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:1312962|PMID:9811838)
UniProt
RGD
PMID:9811838 GO_REF:0000024 MGI:1312962 NCBI chr  X:67,350,376...67,355,072
Ensembl chr  X:67,350,373...67,355,162
JBrowse link
G Cldn1 claudin 1 IEP RGD PMID:22092031 RGD:11344891 NCBI chr11:74,421,569...74,436,728
Ensembl chr11:74,421,569...74,436,724
JBrowse link
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase IEP RGD PMID:17000237 RGD:6483342 NCBI chr10:85,511,164...85,517,723
Ensembl chr10:85,511,160...85,517,720
JBrowse link
G Cnr1 cannabinoid receptor 1 IMP RGD PMID:19681872 PMID:19295473 RGD:2314645, RGD:2314676 NCBI chr 5:48,408,543...48,436,099
Ensembl chr 5:48,408,574...48,435,099
JBrowse link
G Cnr2 cannabinoid receptor 2 IMP RGD PMID:18483180 RGD:2316221 NCBI chr 5:148,125,222...148,151,548
Ensembl chr 5:148,125,604...148,151,548
JBrowse link
G Comt catechol-O-methyltransferase IEP RGD PMID:17573159 RGD:2289732 NCBI chr11:82,568,052...82,587,642
Ensembl chr11:82,568,025...82,587,642
JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 involved_in IEP
ISO
(PMID:15897806) RGD PMID:15897806 PMID:17539997 RGD:2303515 NCBI chr 9:68,614,153...68,737,037
Ensembl chr 9:68,614,153...68,737,033
JBrowse link
G Csf1 colony stimulating factor 1 IEP RGD PMID:24882100 RGD:151667420 NCBI chr 2:195,377,215...195,396,608
Ensembl chr 2:195,377,215...195,411,704
JBrowse link
G Csf1r colony stimulating factor 1 receptor IEP RGD PMID:24882100 RGD:151667420 NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
JBrowse link
G Csf2rb colony stimulating factor 2 receptor subunit beta IEP RGD PMID:7643220 RGD:632531 NCBI chr 7:109,876,919...109,901,589
Ensembl chr 7:109,886,425...109,904,157
JBrowse link
G Ctsg cathepsin G acts_upstream_of_or_within ISO MGI:2182170|MGI:2679229 (MGI:2182072|PMID:10714686) RGD PMID:10714686 MGI:2182072 NCBI chr15:29,930,988...29,937,353
Ensembl chr15:29,931,003...29,937,353
JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 IEP RGD PMID:19390478 RGD:5135010 NCBI chr14:17,193,364...17,195,143
Ensembl chr14:17,193,365...17,195,215
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 IEP RGD PMID:9288136 RGD:2311389 NCBI chr14:15,704,772...15,706,969
Ensembl chr14:15,704,758...15,706,975
JBrowse link
G Cxcl3 C-X-C motif chemokine ligand 3 IEP RGD PMID:15045510 RGD:5135238 NCBI chr14:17,270,146...17,289,458
Ensembl chr14:17,270,146...17,289,511
JBrowse link
G Cxcl6 C-X-C motif chemokine ligand 6 acts_upstream_of_or_within ISO MGI:4819800 (MGI:4819434|PMID:20643340) RGD PMID:20643340 MGI:4819434 NCBI chr14:17,310,089...17,312,303
Ensembl chr14:17,310,426...17,313,093
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IEP RGD PMID:18308837 RGD:2306652 NCBI chr 8:58,096,021...58,102,130
Ensembl chr 8:58,096,077...58,102,125
JBrowse link
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 IEP RGD PMID:18314883 RGD:2303377 NCBI chr 8:58,075,367...58,082,255
Ensembl chr 8:58,075,367...58,082,312
JBrowse link
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 involved_in ISO
IEA
(PMID:12855575)
GO_REF:0000107
RGD
Ensembl
PMID:12855575 GO_REF:0000107 NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241
JBrowse link
G Cyp2c7 cytochrome P450, family 2, subfamily c, polypeptide 7 IEP RGD PMID:8435092 RGD:2301476 NCBI chr 1:237,332,641...237,388,714
Ensembl chr 1:237,332,659...237,388,709
JBrowse link
G Dcn decorin IEP RGD PMID:18471238 RGD:2311419 NCBI chr 7:32,281,252...32,321,291
Ensembl chr 7:32,281,252...32,321,270
JBrowse link
G Dio2 iodothyronine deiodinase 2 IEP RGD PMID:16095572 RGD:2313697 NCBI chr 6:109,665,523...109,679,809
Ensembl chr 6:109,665,523...109,679,809
JBrowse link
G Dnmt1 DNA methyltransferase 1 IEP RGD PMID:23271618 RGD:9588621 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G Dusp10 dual specificity phosphatase 10 acts_upstream_of_or_within ISO MGI:3052343 (MGI:4366202|PMID:19696743) RGD PMID:19696743 MGI:4366202 NCBI chr13:95,613,716...95,651,716
Ensembl chr13:95,614,292...95,651,716
JBrowse link
G Edn1 endothelin 1 IEP RGD PMID:16360659 RGD:4144129 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Ednra endothelin receptor type A IMP RGD PMID:20397012 RGD:4892341 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
JBrowse link
G Ednrb endothelin receptor type B IMP RGD PMID:20888431 RGD:4892334 NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115
JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 IMP RGD PMID:15630703 RGD:2301739 NCBI chr 6:16,189,000...16,224,972
Ensembl chr 6:16,188,979...16,224,971
JBrowse link
G Elane elastase, neutrophil expressed acts_upstream_of_or_within ISO MGI:2182177|MGI:88563 (MGI:2182072|PMID:10714686) RGD PMID:10714686 MGI:2182072 NCBI chr 7:9,817,251...9,819,174
Ensembl chr 7:9,817,252...9,819,100
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IEP RGD PMID:11383876 RGD:9685454 NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317
JBrowse link
G Epha3 Eph receptor A3 IEP RGD PMID:15671251 RGD:1581943 NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
JBrowse link
G Epo erythropoietin IEP RGD PMID:9321887 RGD:2313657 NCBI chr12:19,204,258...19,207,948
Ensembl chr12:19,204,508...19,207,946
JBrowse link
G Erbin erbb2 interacting protein involved_in ISO (PMID:16203728) RGD PMID:16203728 NCBI chr 2:34,926,962...35,028,440
Ensembl chr 2:34,928,863...35,027,852
JBrowse link
G F2r coagulation factor II (thrombin) receptor involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
MGI:3038377 (MGI:3784647|PMID:18305483)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18305483 GO_REF:0000024 GO_REF:0000107 MGI:3784647 NCBI chr 2:26,869,343...26,885,856
Ensembl chr 2:26,868,404...26,885,870
JBrowse link
G F3 coagulation factor III, tissue factor IEP RGD PMID:16113797 RGD:2313752 NCBI chr 2:209,827,061...209,838,666
Ensembl chr 2:209,826,959...209,838,668
JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:17899301 RGD:2290175 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Faslg Fas ligand IEP RGD PMID:17899301 RGD:2290175 NCBI chr13:74,151,519...74,172,760
Ensembl chr13:74,154,954...74,162,215
JBrowse link
G Fer FER tyrosine kinase involved_in ISS
ISO
GO_REF:0000024
(MGI:5319615|PMID:16009680)
UniProt
RGD
PMID:16009680 GO_REF:0000024 MGI:5319615 NCBI chr 9:103,520,452...103,827,364
Ensembl chr 9:103,520,493...103,821,451
JBrowse link
G Fgf10 fibroblast growth factor 10 IEP RGD PMID:19524256 RGD:2314159 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 IEP RGD PMID:19524256 RGD:2314159 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
JBrowse link
G Fmo1 flavin containing dimethylaniline monoxygenase 1 IEP RGD PMID:19779138 RGD:2316301 NCBI chr13:75,182,184...75,214,439
Ensembl chr13:75,182,176...75,214,647
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:11389931 RGD:2293789 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
JBrowse link
G Foxp1 forkhead box P1 involved_in ISO (PMID:18799727) RGD PMID:18799727 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
JBrowse link
G Foxp3 forkhead box P3 IEP RGD PMID:19998507 RGD:38455980 NCBI chr  X:14,908,494...14,924,994
Ensembl chr  X:14,908,494...14,923,838
JBrowse link
G Gch1 GTP cyclohydrolase 1 NOT|involved_in ISO (PMID:15604419)
(PMID:7678411), (PMID:9445252)
RGD PMID:7678411 PMID:9445252 PMID:15604419 NCBI chr15:20,404,267...20,437,727
Ensembl chr15:20,402,527...20,437,698
JBrowse link
G Gfer growth factor, augmenter of liver regeneration IEP RGD PMID:23073658 RGD:9685733 NCBI chr10:13,718,489...13,721,782
Ensembl chr10:13,718,489...13,720,869
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 IEP RGD PMID:19699728 RGD:2315572 NCBI chr20:13,074,695...13,104,095
Ensembl chr20:13,074,700...13,108,442
JBrowse link
G Gja1 gap junction protein, alpha 1 IEP RGD PMID:10909894 RGD:11568670 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
JBrowse link
G Gjb2 gap junction protein, beta 2 IEP RGD PMID:10909894 RGD:11568670 NCBI chr15:31,260,390...31,278,222
Ensembl chr15:31,260,357...31,278,177
JBrowse link
G Gjb6 gap junction protein, beta 6 IEP RGD PMID:23023213 RGD:7364771 NCBI chr15:31,284,562...31,295,010
Ensembl chr15:31,284,419...31,294,582
JBrowse link
G Gng12 G protein subunit gamma 12 IEP RGD PMID:19568691 RGD:2314443 NCBI chr 4:96,011,118...96,134,767
Ensembl chr 4:96,010,952...96,134,712
JBrowse link
G Gnrh1 gonadotropin releasing hormone 1 IEP RGD PMID:9075691 RGD:9685070 NCBI chr15:41,972,482...41,976,690
Ensembl chr15:41,972,905...41,973,581
Ensembl chr15:41,972,905...41,973,581
JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 acts_upstream_of_or_within ISO (MGI:6282238|PMID:29402223) RGD PMID:29402223 MGI:6282238 NCBI chr10:31,118,667...31,151,730
Ensembl chr10:31,119,088...31,151,698
JBrowse link
G Hdac1 histone deacetylase 1 IEP RGD PMID:23271618 PMID:24595367 RGD:9588621, RGD:9590254 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hdac2 histone deacetylase 2 IEP RGD PMID:24595367 RGD:9590254 NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Hmgb1 high mobility group box 1 IEP RGD PMID:19959191 RGD:2316737 NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5640906|PMID:25306442)
AgBase
RGD
PMID:25306442 GO_REF:0000024 MGI:5640906 NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140
JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr11:47,252,583...47,253,646
Ensembl chr11:47,252,569...47,253,669
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IEP RGD PMID:11679969 RGD:12904749 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320
JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO
IEA
(MGI:5306322|PMID:12456657)
GO_REF:0000107
RGD
Ensembl
PMID:12456657 GO_REF:0000107 MGI:5306322 NCBI chr17:6,507,413...6,509,373
Ensembl chr17:6,507,275...6,509,375
JBrowse link
G Hp haptoglobin IEP RGD PMID:16968543 RGD:1626367 NCBI chr19:37,539,626...37,544,178
Ensembl chr19:37,539,627...37,544,523
JBrowse link
G Hpgd 15-hydroxyprostaglandin dehydrogenase IEP RGD PMID:12399253 RGD:2316279 NCBI chr16:33,986,265...34,024,228
Ensembl chr16:33,986,266...34,024,228
JBrowse link
G Hsf1 heat shock transcription factor 1 acts_upstream_of_or_within ISO MGI:2155444 (MGI:1347429|PMID:10545106) RGD PMID:10545106 MGI:1347429 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 IEP RGD PMID:8569188 RGD:1624223 NCBI chr 9:56,579,195...56,590,011
Ensembl chr 9:56,579,201...56,589,662
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP RGD PMID:20871155 RGD:4145345 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 acts_upstream_of_or_within ISO MGI:3505776 (MGI:3837074|PMID:19234212) RGD PMID:19234212 MGI:3837074 NCBI chr16:67,430,684...67,442,459
Ensembl chr16:67,430,578...67,442,730
JBrowse link
G Ifnar1 interferon alpha and beta receptor subunit 1 involved_in ISO (MGI:5562515|PMID:23872679) RGD PMID:23872679 MGI:5562515 NCBI chr11:30,725,774...30,752,227
Ensembl chr11:30,725,790...30,749,979
JBrowse link
G Igf1 insulin-like growth factor 1 IEP RGD PMID:19180987 RGD:2306698 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Igfbp3 insulin-like growth factor binding protein 3 IEP RGD PMID:15930173 RGD:12743621 NCBI chr14:82,056,347...82,064,083
Ensembl chr14:82,056,347...82,064,083
JBrowse link
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta IEP RGD PMID:17594812 RGD:10045960 NCBI chr16:69,319,487...69,373,251
Ensembl chr16:69,319,554...69,373,250
JBrowse link
G Il10 interleukin 10 IEP RGD PMID:18791499 PMID:19390478 RGD:2308944, RGD:5135010 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G Il10ra interleukin 10 receptor subunit alpha IEP RGD PMID:12010759 RGD:628327 NCBI chr 8:45,563,009...45,578,041
Ensembl chr 8:45,563,137...45,578,061
JBrowse link
G Il12a interleukin 12A involved_in ISO (PMID:7605994), (PMID:8557999) RGD PMID:7605994 PMID:8557999 NCBI chr 2:152,965,769...152,973,035
Ensembl chr 2:152,965,769...152,972,734
JBrowse link
G Il12rb2 interleukin 12 receptor subunit beta 2 acts_upstream_of_or_within ISO MGI:96824 (MGI:2148358|PMID:11489994) RGD PMID:11489994 MGI:2148358 NCBI chr 4:96,424,615...96,515,327
Ensembl chr 4:96,426,842...96,515,289
JBrowse link
G Il13 interleukin 13 IEP RGD PMID:16522370 RGD:2317671 NCBI chr10:37,790,130...37,792,687
Ensembl chr10:37,790,130...37,792,737
JBrowse link
G Il18bp interleukin 18 binding protein IEP RGD PMID:12788303 RGD:4889504 NCBI chr 1:156,372,923...156,374,963
Ensembl chr 1:156,372,883...156,374,963
JBrowse link
G Il1a interleukin 1 alpha IEP RGD PMID:19524137 RGD:2311077 NCBI chr 3:116,526,601...116,537,055
Ensembl chr 3:116,526,604...116,536,822
JBrowse link
G Il1b interleukin 1 beta acts_upstream_of_or_within
involved_in
IEP
ISO
MGI:3606250 (MGI:3640698|PMID:16423834), (MGI:3796019|PMID:18490713)
(PMID:19193853)
RGD PMID:16423834 PMID:18490713 PMID:19193853 PMID:17201737 MGI:3640698 MGI:3796019, RGD:1626625 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Il1rn interleukin 1 receptor antagonist IEP RGD PMID:17138728 PMID:23055766 RGD:1626670, RGD:6909174 NCBI chr 3:7,111,567...7,127,451
Ensembl chr 3:7,111,550...7,127,445
JBrowse link
G Il23r interleukin 23 receptor involved_in ISO (PMID:12023369) RGD PMID:12023369 NCBI chr 4:96,580,568...96,672,540
Ensembl chr 4:96,580,714...96,674,021
JBrowse link
G Il27ra interleukin 27 receptor subunit alpha involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:24,109,698...24,121,977
Ensembl chr19:24,109,972...24,121,938
JBrowse link
G Il6 interleukin 6 IEP RGD PMID:19410080 RGD:2306921 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Il6r interleukin 6 receptor IEP RGD PMID:7814800 RGD:1625445 NCBI chr 2:175,289,157...175,347,719
Ensembl chr 2:175,298,686...175,347,536
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:10383454)
(MGI:2178646|PMID:10549626), (MGI:2669022|PMID:12855817)
RGD PMID:10383454 PMID:10549626 PMID:12855817 MGI:2178646 MGI:2669022 NCBI chr  X:151,768,621...151,778,521
Ensembl chr  X:151,768,777...151,778,521
JBrowse link
G Irak3 interleukin-1 receptor-associated kinase 3 involved_in ISO (MGI:2183694|PMID:12150927) RGD PMID:12150927 MGI:2183694 NCBI chr 7:55,653,949...55,714,371
Ensembl chr 7:55,653,962...55,713,121
JBrowse link
G Irf3 interferon regulatory factor 3 acts_upstream_of_or_within ISO (MGI:2669022|PMID:12855817), (MGI:2670551|PMID:12872135) RGD PMID:12855817 PMID:12872135 MGI:2669022 MGI:2670551 NCBI chr 1:95,479,966...95,484,926
Ensembl chr 1:95,479,821...95,484,935
JBrowse link
G Jak2 Janus kinase 2 involved_in ISO (MGI:5050078|PMID:11536325) RGD PMID:11536325 MGI:5050078 NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:11389931 RGD:2293789 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:11389931 RGD:2293789 NCBI chr16:18,734,121...18,735,799
Ensembl chr16:18,734,122...18,735,799
JBrowse link
G Kcnj8 potassium inwardly-rectifying channel, subfamily J, member 8 acts_upstream_of_or_within ISO MGI:3720053 (MGI:3761841|PMID:18026101) RGD PMID:18026101 MGI:3761841 NCBI chr 4:175,508,908...175,515,829
Ensembl chr 4:175,508,912...175,515,603
JBrowse link
G Kmo kynurenine 3-monooxygenase IEP RGD PMID:18584961 RGD:13513902 NCBI chr13:87,557,080...87,589,334
Ensembl chr13:87,557,286...87,588,881
JBrowse link
G Lbp lipopolysaccharide binding protein involved_in
acts_upstream_of_or_within
ISO (PMID:11739189), (PMID:8409400)
MGI:1857975 (MGI:3719540|PMID:12055258)
(MGI:1097829|PMID:9338787)
RGD PMID:8409400 PMID:9338787 PMID:11739189 PMID:12055258 MGI:1097829 MGI:3719540 NCBI chr 3:146,953,889...146,981,032
Ensembl chr 3:146,954,015...146,981,586
JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:25578313)
(MGI:5645190|PMID:25158758)
RGD PMID:25158758 PMID:25578313 MGI:5645190 NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
JBrowse link
G Lias lipoic acid synthetase acts_upstream_of_or_within ISO MGI:3604218 (MGI:3826894|PMID:18845616) RGD PMID:18845616 MGI:3826894 NCBI chr14:42,876,699...42,893,824
Ensembl chr14:42,876,699...42,893,783
JBrowse link
G Litaf lipopolysaccharide-induced TNF factor acts_upstream_of_or_within ISO MGI:2182767|MGI:3687962 (MGI:5305524|PMID:22160695) RGD PMID:22160695 MGI:5305524 NCBI chr10:4,656,308...4,692,981
Ensembl chr10:4,625,552...4,692,763
JBrowse link
G Loxl1 lysyl oxidase-like 1 IEP RGD PMID:19218354 RGD:7394732 NCBI chr 8:58,692,592...58,716,356
Ensembl chr 8:58,692,593...58,716,356
JBrowse link
G Lta lymphotoxin alpha IEP RGD PMID:12849708 RGD:1625037 NCBI chr20:3,618,853...3,621,324
Ensembl chr20:3,618,853...3,620,859
JBrowse link
G Ltc4s leukotriene C4 synthase IEP RGD PMID:15619010 RGD:2316620 NCBI chr10:34,560,476...34,562,790
Ensembl chr10:34,560,360...34,562,651
JBrowse link
G Ly96 lymphocyte antigen 96 acts_upstream_of_or_within
involved_in
ISO (PMID:12594207)
(PMID:14607928)
RGD PMID:12594207 PMID:14607928 NCBI chr 5:2,582,233...2,612,357
Ensembl chr 5:2,582,254...2,612,386
JBrowse link
G Maob monoamine oxidase B IEP RGD PMID:19779138 RGD:2316301 NCBI chr  X:5,907,327...6,010,996
Ensembl chr  X:5,907,266...6,011,003
JBrowse link
G Mapk1 mitogen activated protein kinase 1 acts_upstream_of_or_within ISO (MGI:2670551|PMID:12872135) RGD PMID:12872135 MGI:2670551 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
JBrowse link
G Mapk14 mitogen activated protein kinase 14 acts_upstream_of_or_within ISO (MGI:2670551|PMID:12872135) RGD PMID:12872135 MGI:2670551 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO (MGI:2670551|PMID:12872135) RGD PMID:12872135 MGI:2670551 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in ISO (MGI:1352048|PMID:10559880), (MGI:3761050|PMID:17906627) RGD PMID:10559880 PMID:17906627 MGI:1352048 MGI:3761050 NCBI chr13:42,513,762...42,560,061
Ensembl chr13:42,513,762...42,560,457
JBrowse link
G Mapkapk3 MAPK activated protein kinase 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:3761050|PMID:17906627)
UniProt
RGD
PMID:17906627 GO_REF:0000024 MGI:3761050 NCBI chr 8:107,929,754...107,963,638
Ensembl chr 8:107,929,762...107,963,568
JBrowse link
G Mefv MEFV innate immuity regulator, pyrin IEP RGD PMID:16574623 RGD:7349342 NCBI chr10:11,786,948...11,796,977
Ensembl chr10:11,787,422...11,796,973
JBrowse link
G Mgst1 microsomal glutathione S-transferase 1 IDA RGD PMID:18634816 RGD:2302282 NCBI chr 4:171,029,666...171,044,893
Ensembl chr 4:171,029,630...171,044,892
JBrowse link
G Mgst2 microsomal glutathione S-transferase 2 IEP RGD PMID:18461660 RGD:2302283 NCBI chr 2:135,679,524...135,715,828
Ensembl chr 2:135,693,557...135,715,828
JBrowse link
G Mif macrophage migration inhibitory factor IEP RGD PMID:14980085 RGD:1641998 NCBI chr20:12,790,919...12,791,784
Ensembl chr20:12,790,902...12,799,504
JBrowse link
G Mmp3 matrix metallopeptidase 3 IEP RGD PMID:19345799 RGD:2325870 NCBI chr 8:4,640,397...4,653,963
Ensembl chr 8:4,640,416...4,653,961
JBrowse link
G Mmp9 matrix metallopeptidase 9 IEP RGD PMID:17452115 RGD:1642037 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
JBrowse link
G Mpo myeloperoxidase IEP RGD PMID:15788232 RGD:2317972 NCBI chr10:72,594,458...72,608,862
Ensembl chr10:72,594,661...72,604,819
JBrowse link
G Muc2 mucin 2, oligomeric mucus/gel-forming IEP RGD PMID:17417665 RGD:2324678 NCBI chr 1:196,796,257...196,831,740
Ensembl chr 1:196,799,517...196,831,756
JBrowse link
G Muc5ac mucin 5AC, oligomeric mucus/gel-forming IEP RGD PMID:19064121 RGD:2324961 NCBI chr 1:196,864,375...196,896,475
Ensembl chr 1:196,864,336...196,896,475
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor acts_upstream_of_or_within ISO MGI:2147032|MGI:2385681 (MGI:2669022|PMID:12855817), (MGI:2670551|PMID:12872135), (MGI:3042099|PMID:12719478), (MGI:3640248|PMID:10607756) RGD PMID:10607756 PMID:12719478 PMID:12855817 PMID:12872135 MGI:2669022 MGI:2670551 MGI:3042099 MGI:3640248 NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
JBrowse link
G Nat2 N-acetyltransferase 2 IEP RGD PMID:12071337 RGD:5131542 NCBI chr16:22,207,362...22,238,513
Ensembl chr16:22,208,194...22,238,520
JBrowse link
G Ncf2 neutrophil cytosolic factor 2 IDA RGD PMID:17448908 RGD:2314442 NCBI chr13:64,955,502...64,986,289
Ensembl chr13:64,955,503...64,986,277
JBrowse link
G Nfkb2 nuclear factor kappa B subunit 2 IEP RGD PMID:12770614 RGD:2293782 NCBI chr 1:245,164,586...245,173,225
Ensembl chr 1:245,165,950...245,173,213
JBrowse link
G Nfkbia NFKB inhibitor alpha acts_upstream_of_or_within ISO (MGI:2670551|PMID:12872135) RGD PMID:12872135 MGI:2670551 NCBI chr 6:72,858,713...72,861,941
Ensembl chr 6:72,858,712...72,861,941
JBrowse link
G Ngf nerve growth factor IEP RGD PMID:19012240 RGD:2303803 NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
JBrowse link
G Ngfr nerve growth factor receptor IEP RGD PMID:21084570 RGD:5144146 NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518
JBrowse link
G Nkx2-1 NK2 homeobox 1 IDA RGD PMID:16627577 RGD:1600142 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
JBrowse link
G Nlrc3 NLR family, CARD domain containing 3 acts_upstream_of_or_within ISO MGI:5439971 (MGI:5437524|PMID:22863753) RGD PMID:22863753 MGI:5437524 NCBI chr10:11,551,378...11,585,027
Ensembl chr10:11,551,356...11,584,398
JBrowse link
G Noct nocturnin involved_in ISS
ISO
GO_REF:0000024
(MGI:5308514|PMID:22073225)
UniProt
RGD
PMID:22073225 GO_REF:0000024 MGI:5308514 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within ISO MGI:2680581|MGI:3529594 (MGI:2679172|PMID:14560001), (MGI:3528786|PMID:15692051) RGD PMID:14560001 PMID:15692051 MGI:2679172 MGI:3528786 NCBI chr19:18,379,720...18,422,817
Ensembl chr19:18,382,439...18,417,177
JBrowse link
G Nos1 nitric oxide synthase 1 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:20724006 PMID:21873635 RGD:5131926, RGD:13792537 NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945
JBrowse link
G Nos2 nitric oxide synthase 2 involved_in IEP
ISO
IBA
(MGI:5308514|PMID:22073225)
PMID:21873635
RGD PMID:22073225 PMID:9686345 PMID:21873635 MGI:5308514, RGD:4139908, RGD:13792537 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210
JBrowse link
G Nos3 nitric oxide synthase 3 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:18031380 PMID:21873635 RGD:2292116, RGD:13792537 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
JBrowse link
G Notch1 notch receptor 1 IEP RGD PMID:18449946 RGD:2325312 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Nppb natriuretic peptide B IEP RGD PMID:22224641 RGD:5685643 NCBI chr 5:158,416,813...158,418,175
Ensembl chr 5:158,416,866...158,418,168
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 IEP RGD PMID:12492453 RGD:1625206 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047
JBrowse link
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 IEP RGD PMID:8821744 RGD:14700868 NCBI chr 7:132,368,399...132,389,300
Ensembl chr 7:132,374,840...132,389,297
JBrowse link
G Nrf1 nuclear respiratory factor 1 IEP RGD PMID:18062988 RGD:2302402 NCBI chr 4:58,664,932...58,772,328
Ensembl chr 4:58,664,957...58,825,328
JBrowse link
G Oprm1 opioid receptor, mu 1 IEP RGD PMID:17553897 RGD:2316609 NCBI chr 1:43,160,057...43,413,409
Ensembl chr 1:43,160,057...43,413,409
JBrowse link
G Orm1 orosomucoid 1 IEP RGD PMID:11350548 RGD:2316644 NCBI chr 5:76,766,637...76,776,149
Ensembl chr 5:76,772,941...76,776,154
JBrowse link
G Otud5 OTU deubiquitinase 5 involved_in ISO
ISS
(PMID:22245969)
GO_REF:0000024
RGD
UniProt
PMID:22245969 GO_REF:0000024 NCBI chr  X:14,626,173...14,659,331
Ensembl chr  X:14,626,164...14,659,573
JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO MGI:2386080 (MGI:3051178|PMID:15240711), (MGI:3653950|PMID:12055263), (MGI:3710713|PMID:17448897) RGD PMID:12055263 PMID:15240711 PMID:17448897 MGI:3051178 MGI:3653950 MGI:3710713 NCBI chr12:33,889,709...33,934,168
Ensembl chr12:33,879,745...33,934,619
JBrowse link
G Palm3 paralemmin 3 involved_in ISO
IBA
(PMID:21187075)
PMID:21873635
RGD PMID:21187075 PMID:21873635 RGD:13792537 NCBI chr19:24,121,984...24,126,079
Ensembl chr19:24,122,239...24,130,448
JBrowse link
G Pawr pro-apoptotic WT1 regulator IEP RGD PMID:17136598 RGD:9835397 NCBI chr 7:43,645,028...43,725,033
Ensembl chr 7:43,645,084...43,725,028
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 IEP RGD PMID:19268478 RGD:10427879 NCBI chr 3:161,930,256...161,936,205
Ensembl chr 3:161,930,256...161,936,191
JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) IEP RGD PMID:19268478 RGD:10427879 NCBI chr15:29,027,891...29,036,729
Ensembl chr15:29,027,894...29,037,283
JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 IEP RGD PMID:10630414 RGD:2308911 NCBI chr 2:4,395,543...4,442,434
Ensembl chr 2:4,395,543...4,442,434
JBrowse link
G Pde5a phosphodiesterase 5A IEP RGD PMID:17141339 RGD:2314470 NCBI chr 2:210,858,515...211,003,480
Ensembl chr 2:210,858,063...210,999,701
JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:19193853)
MGI:4361448 (MGI:4359971|PMID:19734906)
RGD PMID:19193853 PMID:19734906 MGI:4359971 NCBI chr14:95,254,274...95,309,168
Ensembl chr14:95,254,589...95,308,285
JBrowse link
G Penk proenkephalin IEP RGD PMID:8784263 RGD:10003024 NCBI chr 5:17,183,799...17,189,160
Ensembl chr 5:17,183,806...17,189,129
JBrowse link
G Pla2g4a phospholipase A2 group IVA IEP RGD PMID:17093905 RGD:1642448 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
JBrowse link
G Plcg2 phospholipase C, gamma 2 acts_upstream_of_or_within ISO (MGI:85738|PMID:9013981) RGD PMID:9013981 MGI:85738 NCBI chr19:45,547,416...45,683,930
Ensembl chr19:45,547,416...45,683,930
JBrowse link
G Prdx2 peroxiredoxin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2668456 (MGI:3758374|PMID:17325201)
Ensembl
RGD
PMID:17325201 GO_REF:0000107 MGI:3758374 NCBI chr19:23,180,927...23,186,217
Ensembl chr19:23,180,930...23,186,194
JBrowse link
G Prdx3 peroxiredoxin 3 acts_upstream_of_or_within ISO MGI:3700138 (MGI:3699958|PMID:17316558) RGD PMID:17316558 MGI:3699958 NCBI chr 1:260,001,642...260,014,064
Ensembl chr 1:260,001,637...260,014,111
JBrowse link
G Prl prolactin IEP RGD PMID:17706967 RGD:1642565 NCBI chr17:37,859,999...37,870,062
Ensembl chr17:37,860,007...37,870,062
JBrowse link
G Pros1 protein S IEP RGD PMID:16879219 RGD:2300012 NCBI chr11:230,597...311,288
Ensembl chr11:230,696...311,286
JBrowse link
G Ptafr platelet-activating factor receptor acts_upstream_of_or_within IEP
ISO
(MGI:85738|PMID:9013981) RGD PMID:9013981 PMID:9065783 MGI:85738, RGD:9999198 NCBI chr 5:144,765,770...144,795,057
Ensembl chr 5:144,765,976...144,795,251
JBrowse link
G Ptger1 prostaglandin E receptor 1 acts_upstream_of_or_within ISO MGI:2137762 (MGI:3577831|PMID:15834430) RGD PMID:15834430 MGI:3577831 NCBI chr19:24,470,258...24,473,687
Ensembl chr19:24,467,532...24,473,559
JBrowse link
G Ptger2 prostaglandin E receptor 2 acts_upstream_of_or_within ISO MGI:2651880 (MGI:3577831|PMID:15834430) RGD PMID:15834430 MGI:3577831 NCBI chr15:18,215,013...18,228,714
Ensembl chr15:18,217,285...18,228,714
JBrowse link
G Ptger3 prostaglandin E receptor 3 acts_upstream_of_or_within ISO MGI:2137759 (MGI:3577831|PMID:15834430) RGD PMID:15834430 MGI:3577831 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
G Ptger4 prostaglandin E receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2137851 (MGI:3577831|PMID:15834430)
Ensembl
RGD
PMID:15834430 GO_REF:0000107 MGI:3577831 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
G Ptges prostaglandin E synthase IEP RGD PMID:18383341 RGD:2300090 NCBI chr 3:14,177,892...14,189,236 JBrowse link
G Ptgfr prostaglandin F receptor acts_upstream_of_or_within ISO MGI:2179271 (MGI:3577831|PMID:15834430) RGD PMID:15834430 MGI:3577831 NCBI chr 2:240,731,185...240,766,674
Ensembl chr 2:240,733,375...240,765,650
JBrowse link
G Ptgir prostaglandin I2 receptor acts_upstream_of_or_within ISO MGI:2137832 (MGI:3577831|PMID:15834430) RGD PMID:15834430 MGI:3577831 NCBI chr 1:77,579,596...77,581,979
Ensembl chr 1:77,579,596...77,581,979
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IMP RGD PMID:17766482 RGD:1642599 NCBI chr13:62,164,080...62,169,770
Ensembl chr13:62,163,932...62,172,188
JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 involved_in ISO (PMID:23871208) RGD PMID:23871208 NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit IEP RGD PMID:17915214 RGD:2298850 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G Ren renin IEP RGD PMID:22342485 RGD:6892689 NCBI chr13:44,796,260...44,807,491
Ensembl chr13:44,796,091...44,807,489
JBrowse link
G RGD1559962 similar to High mobility group protein 2 (HMG-2) involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:19,409,285...19,410,183
Ensembl chr 1:19,409,539...19,410,168
JBrowse link
G RGD1561694 similar to High mobility group protein 2 (HMG-2) involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr14:69,045,590...69,046,623
Ensembl chr14:69,045,641...69,046,640
JBrowse link
G Rpl13a ribosomal protein L13A acts_upstream_of_or_within ISO MGI:5502322 (MGI:5475059|PMID:23460747) RGD PMID:23460747 MGI:5475059 NCBI chr 1:95,609,374...95,612,557
Ensembl chr 1:95,609,370...95,620,463
JBrowse link
G Rps6ka3 ribosomal protein S6 kinase A3 involved_in ISO (MGI:3761050|PMID:17906627) RGD PMID:17906627 MGI:3761050 NCBI chr  X:35,517,306...35,623,296
Ensembl chr  X:35,517,306...35,623,207
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 IEP RGD PMID:15389631 RGD:1643035 NCBI chr10:71,323,777...71,367,908
Ensembl chr10:71,323,777...71,367,908
JBrowse link
G S100a14 S100 calcium binding protein A14 involved_in ISO (PMID:17625598) RGD PMID:17625598 NCBI chr 2:176,008,395...176,010,423
Ensembl chr 2:176,008,395...176,010,423
JBrowse link
G S100a7l2 S100 calcium binding protein A7 like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:176,506,300...176,509,196
Ensembl chr 2:176,506,300...176,509,196
JBrowse link
G S100a8 S100 calcium binding protein A8 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:17207109 PMID:21873635 RGD:2316908, RGD:13792537 NCBI chr 2:176,166,517...176,167,645
Ensembl chr 2:176,167,124...176,167,643
JBrowse link
G S100a9 S100 calcium binding protein A9 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:17207109 PMID:21873635 RGD:2316908, RGD:13792537 NCBI chr 2:176,190,361...176,193,182
Ensembl chr 2:176,190,361...176,193,230
JBrowse link
G S100vp S100 calcium-binding protein, ventral prostate involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:176,748,273...176,751,624
Ensembl chr 2:176,748,273...176,751,624
JBrowse link
G Scgb1a1 secretoglobin family 1A member 1 IEP RGD PMID:18420837 RGD:5143982 NCBI chr 1:205,977,060...205,980,610
Ensembl chr 1:205,977,060...205,980,610
JBrowse link
G Selp selectin P IEP RGD PMID:7520013 RGD:729708 NCBI chr13:76,476,229...76,511,846
Ensembl chr13:76,476,295...76,511,845
JBrowse link
G Serpina1 serpin family A member 1 IEP RGD PMID:1466268 RGD:1643153 NCBI chr 6:122,866,314...122,888,339
Ensembl chr 6:122,866,312...122,888,339
JBrowse link
G Serpina3n serine (or cysteine) peptidase inhibitor, clade A, member 3N IEP RGD PMID:12127095 RGD:5147408 NCBI chr 6:123,323,632...123,331,166
Ensembl chr 6:123,323,629...123,332,433
JBrowse link
G Serpine1 serpin family E member 1 IEP RGD PMID:9569197 RGD:8547847 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Sftpa1 surfactant protein A1 IEP RGD PMID:11000512 RGD:4144154 NCBI chr16:17,008,180...17,011,686
Ensembl chr16:17,008,180...17,011,685
JBrowse link
G Sftpb surfactant protein B IEP RGD PMID:11000512 PMID:27338059 RGD:4144154, RGD:151667427 NCBI chr 4:104,359,303...104,368,439
Ensembl chr 4:104,359,396...104,368,436
JBrowse link
G Sftpc surfactant protein C IEP RGD PMID:11000512 RGD:4144154 NCBI chr15:45,596,565...45,599,615
Ensembl chr15:45,596,574...45,610,777
JBrowse link
G Slc11a1 solute carrier family 11 member 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:1857756 (MGI:1095423|PMID:9261342), (MGI:3758128|PMID:17620357), (MGI:3839054|PMID:18984740)
PMID:21873635
(PMID:10678911)
RGD PMID:9261342 PMID:10678911 PMID:17620357 PMID:18984740 PMID:21873635 MGI:1095423 MGI:3758128 MGI:3839054, RGD:13792537 NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101
JBrowse link
G Slco1b2 solute carrier organic anion transporter family member 1B2 IEP RGD PMID:18310902 RGD:2303092 NCBI chr 4:174,551,463...174,619,988
Ensembl chr 4:174,551,480...174,619,981
JBrowse link
G Slpi secretory leukocyte peptidase inhibitor involved_in ISO (MGI:2651774|PMID:12615907) RGD PMID:12615907 MGI:2651774 NCBI chr 3:153,082,208...153,084,457
Ensembl chr 3:153,082,369...153,084,453
JBrowse link
G Smad6 SMAD family member 6 involved_in ISO (PMID:19193853) RGD PMID:19193853 NCBI chr 8:64,450,114...64,519,673
Ensembl chr 8:64,450,114...64,519,763
JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:12406186) RGD PMID:12406186 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
G Socs1 suppressor of cytokine signaling 1 IEP RGD PMID:18424750 RGD:2298910 NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383
JBrowse link
G Socs3 suppressor of cytokine signaling 3 IEP RGD PMID:18424750 RGD:2298910 NCBI chr10:103,193,909...103,197,322
Ensembl chr10:103,193,537...103,197,787
JBrowse link
G Sod2 superoxide dismutase 2 IEP RGD PMID:17804075 RGD:2317399 NCBI chr 1:47,638,318...47,645,163
Ensembl chr 1:47,636,528...47,645,189
JBrowse link
G Sparc secreted protein acidic and cysteine rich IEP RGD PMID:10703670 RGD:2300026 NCBI chr10:39,516,394...39,538,252
Ensembl chr10:39,516,406...39,538,396
JBrowse link
G Spon2 spondin 2 acts_upstream_of_or_within ISO MGI:3026870 (MGI:2686801|PMID:14691481) RGD PMID:14691481 MGI:2686801 NCBI chr14:77,505,695...77,518,001
Ensembl chr14:77,511,901...77,517,996
JBrowse link
G Srr serine racemase involved_in ISO (PMID:15681805) RGD PMID:15681805 NCBI chr10:59,769,563...59,786,688
Ensembl chr10:59,769,571...59,787,011
JBrowse link
G Stat1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO (MGI:2670551|PMID:12872135) RGD PMID:12872135 MGI:2670551 NCBI chr 9:49,419,561...49,459,969
Ensembl chr 9:49,419,340...49,588,540
JBrowse link
G Stat5b signal transducer and activator of transcription 5B IDA RGD PMID:17327369